Citrus Sinensis ID: 021229
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 315 | 2.2.26 [Sep-21-2011] | |||||||
| P23133 | 276 | 2-hydroxy-6-oxo-2,4-hepta | yes | no | 0.726 | 0.829 | 0.272 | 1e-13 | |
| O05235 | 273 | Uncharacterized hydrolase | yes | no | 0.777 | 0.897 | 0.261 | 1e-13 | |
| Q1LZ86 | 337 | Monoacylglycerol lipase A | yes | no | 0.774 | 0.724 | 0.25 | 5e-13 | |
| Q8R2Y0 | 336 | Monoacylglycerol lipase A | yes | no | 0.774 | 0.726 | 0.253 | 1e-12 | |
| Q5XI64 | 337 | Monoacylglycerol lipase A | yes | no | 0.787 | 0.735 | 0.25 | 1e-12 | |
| Q6GLL2 | 337 | Monoacylglycerol lipase a | N/A | no | 0.828 | 0.774 | 0.231 | 7e-12 | |
| Q7SY73 | 337 | Monoacylglycerol lipase a | N/A | no | 0.838 | 0.783 | 0.244 | 7e-12 | |
| Q9BV23 | 337 | Monoacylglycerol lipase A | yes | no | 0.787 | 0.735 | 0.242 | 1e-11 | |
| P0A573 | 341 | Uncharacterized protein M | yes | no | 0.787 | 0.727 | 0.227 | 4e-11 | |
| P0A572 | 341 | Uncharacterized protein R | yes | no | 0.787 | 0.727 | 0.227 | 4e-11 |
| >sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todF PE=3 SV=2 | Back alignment and function desciption |
|---|
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 32/261 (12%)
Query: 52 LVLIHGLG--ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER----SESFQAEC 105
+VL+HG G A W ++P + + V PD++ FG FT RP ES+ A
Sbjct: 30 VVLVHGSGPGVTAWANWRTVMPELSRHRRVIAPDMVGFG--FTQRPHGIHYGVESWVAHL 87
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS-GVCLEEQDLRDRMFK 164
+++A + ++ LVG S+GG + + A +F ++ ++V+ + GV E D D ++
Sbjct: 88 A-GILDALELDRVDLVGNSFGGALSLAFAIRFPHRVRRLVLMGAVGVSFELTDGLDAVWG 146
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
P P ++++M Y + R SLV L A +E +
Sbjct: 147 YE----------PSVP-NMRKVMDYFAYDR---SLVSDELAELRYKASTRPGFQEAFASM 192
Query: 225 RAIPKDRKIS-------NIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK 277
P+ R + +I I TLIL G D++ PLE RL + L + +QL V +
Sbjct: 193 FPAPRQRWVDALASSDQDIRDIRHETLILHGRDDRVIPLETSLRL-NQLIEPSQLHVFGR 251
Query: 278 AGHAFNYEKPKEFYKHLKSFL 298
GH E+ + F + + FL
Sbjct: 252 CGHWVQIEQNRGFIRLVNDFL 272
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Pseudomonas putida (strain F1 / ATCC 700007) (taxid: 351746) EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 30/275 (10%)
Query: 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
++ + +N + LV +HG ++A + + +IP + +++ DL FG S E
Sbjct: 15 VNVYYEHYQNPGRQTLVCVHGFLSSA-FSFRKVIPLLRDKYDIIALDLPPFGQS-----E 68
Query: 97 RSESF------QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150
+S +F A+ V+ ++E VK+ LVG S GG + S A Q E KVV+ CS
Sbjct: 69 KSRTFIYTYQNLAKLVIGILEHLQVKQAVLVGHSMGGQISLSAALQKPELFSKVVLLCSS 128
Query: 151 VCLEEQ------DLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204
L+ F + SK G +K L+ K SL+ +
Sbjct: 129 GYLKRSHPTIIFGTHIPYFHLYIKRWLSK------EGVMKNLLNVVHDK----SLIDEEM 178
Query: 205 LSDYIDAMCTEYL-EEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263
+ Y E + + +R D + + K+ +P L++WGE D+I P+E+G+RL
Sbjct: 179 IDGYGRPFQDEQIFKAMTRFIRHREGDLEPEQLKKMNKPALLIWGEEDRIVPMEIGKRLH 238
Query: 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ L N+ L + + GH E+P+ +H+ F+
Sbjct: 239 ADL-PNSVLYSLGQTGHLVPEERPELISEHIADFI 272
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Bacillus subtilis (strain 168) (taxid: 224308) EC: 3 EC: . EC: 1 EC: . EC: - EC: . EC: - |
| >sp|Q1LZ86|ABHD6_BOVIN Monoacylglycerol lipase ABHD6 OS=Bos taurus GN=ABHD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP- 95
C+ + R KP ++++HG A+ +W +P +H V +P G TTR
Sbjct: 61 CYSFRGRPGHKPSILMLHGFSAHKDMWLSMVKFLPKNLHLVCVDMP-----GHEGTTRSS 115
Query: 96 --ERSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKV-VICCSG 150
+ S Q + + + +E + K LVG S GG V AA + + + ++C +G
Sbjct: 116 LDDLSIDGQVKRIHQFVECLKLNKKPFHLVGTSMGGHVAGVYAAHYPSDVCSLSLVCPAG 175
Query: 151 VCLEEQDLRDRMF--KVSDLEEASKI----LVPQSPGKLKELMR---YTFFKRPPLSLVP 201
+ Q D F ++ +L+E++ + L+P +P ++ E+++ Y FK VP
Sbjct: 176 L----QYSTDNKFVQRLKELQESAAVEKIPLIPTTPKEMSEMLQLCSYVRFK------VP 225
Query: 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKIS---NIDKITQPTLILWGEHDQIFPLEL 258
+L +D ++ + + + + S N+DKI PT I+WG+ DQ+ +
Sbjct: 226 QQILQGLVDVRIPHNTFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSG 285
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L + N+Q+ +++ GH+ E+P++ K L FL
Sbjct: 286 ADMLAKSIA-NSQVELLENCGHSVVMERPRKTAKLLVDFL 324
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Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q8R2Y0|ABHD6_MOUSE Monoacylglycerol lipase ABHD6 OS=Mus musculus GN=Abhd6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
C+ + R KP ++++HG A+ +W +P +H V +P G TTR
Sbjct: 61 CYSFRGRPGHKPSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMP-----GHEGTTRSS 115
Query: 97 RSESFQAECVMRVMEAHSVKKLS-----LVGLSYGGFVGYSMAAQFKEKIEKV-VICCSG 150
+ V R+ + KL+ L+G S GG V AA + + + ++C +G
Sbjct: 116 LDDLSIVGQVKRIHQFVECLKLNKKPFHLIGTSMGGHVAGVYAAYYPSDVCSLSLVCPAG 175
Query: 151 VCLEEQDLRDRMF--KVSDLEEASKI----LVPQSPGKLKELMR---YTFFKRPPLSLVP 201
+ Q D F ++ +LEE++ I L+P +P ++ E+++ Y FK VP
Sbjct: 176 L----QYSTDNPFVQRLKELEESAAIQKIPLIPSTPEEMSEMLQLCSYVRFK------VP 225
Query: 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKIS---NIDKITQPTLILWGEHDQIFPLEL 258
+L +D ++ + + + + S N+DKI PT I+WG+ DQ+ +
Sbjct: 226 QQILQGLVDVRIPHNSFYRKLFLEIVNEKSRYSLHENMDKIKVPTQIIWGKQDQVLDVS- 284
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
G + + N+Q+ V++ GH+ E+P++ K + FL
Sbjct: 285 GADILAKSISNSQVEVLENCGHSVVMERPRKTAKLIVDFL 324
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Has 2-arachidonoylglycerol hydrolase activity. May be a regulator of endocannabinoid signaling pathways. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q5XI64|ABHD6_RAT Monoacylglycerol lipase ABHD6 OS=Rattus norvegicus GN=Abhd6 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 28/276 (10%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
C+ + R KP ++++HG A+ +W +P +H V +P G TTR
Sbjct: 61 CYSFRGRPGHKPSVLMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMP-----GHEGTTRSS 115
Query: 97 RSESFQAECVMRVMEAHSVKKLS-----LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151
+ V R+ + KL+ L+G S GG V AA + + + + C
Sbjct: 116 LDDLSIVGQVKRIHQFVECLKLNKKPFHLIGTSMGGNVAGVYAAYYPSDVCSLSLVCPAG 175
Query: 152 CLEEQDLR--DRMFKVSDLEEASKI-LVPQSPGKLKELMR---YTFFKRPPLSLVPSCLL 205
D R R+ ++ D KI L+P +P ++ E+++ Y FK VP +L
Sbjct: 176 LQYSTDNRFVQRLKELEDSAATQKIPLIPSTPEEMSEMLQLCSYVRFK------VPQQIL 229
Query: 206 SDYIDAMCTEYLEEKRELVRAIPKDRKIS---NIDKITQPTLILWGEHDQIFPLELGRRL 262
+D ++ + + + + S N+DKI PT I+WG+ DQ+ + G +
Sbjct: 230 QGLVDVRIPHNSFYRKLFLEIVSEKSRYSLHENMDKIKVPTQIIWGKQDQVLDVS-GADI 288
Query: 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ N+Q+ V++ GH+ E+P++ K + FL
Sbjct: 289 LAKSITNSQVEVLENCGHSVVMERPRKTAKLVVDFL 324
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Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q6GLL2|ABH6A_XENLA Monoacylglycerol lipase abhd6-A OS=Xenopus laevis GN=abhd6-a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSF 91
G+ C+ + + +K ++++HG A+ +W +P +H V +P G
Sbjct: 56 GNYKFCYTSRGKPGNKASVLMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMP-----GHEG 110
Query: 92 TTRP---ERSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146
TTR + S Q + + + +E+ + K LVG S GG V AAQ I + +
Sbjct: 111 TTRSALDDYSICGQVKRIHQFVESIGLNKRTFHLVGTSMGGNVAGVYAAQHPTDISSLTL 170
Query: 147 CCSGVCL---EEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203
C + E + L+ ++ +L+P + G++++++R F R +P
Sbjct: 171 ICPAGLMYPTESKFLKHLKGLEKSGDDQRILLIPSTAGEMEDMLRLCSFVRFK---IPQQ 227
Query: 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRK----ISNIDKITQPTLILWGEHDQIFPLELG 259
+L +D + E R+L A+ ++ N++KI PT I+WG+ DQ+ +
Sbjct: 228 VLQGLVDVR-IPHNEFYRQLFMALVNEKSRHSLQENMNKIVAPTQIIWGKQDQVLDVSGA 286
Query: 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304
L + Q+ +++ GH+ E+P++ K + FL Q +
Sbjct: 287 EVLAGSI-RGCQVEILENCGHSVVMERPRKSAKLMTDFLSSLQST 330
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Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q7SY73|ABH6B_XENLA Monoacylglycerol lipase abhd6-B OS=Xenopus laevis GN=abhd6-b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSF 91
G+ C+ + + +KP ++++HG A+ +W +P +H V +P G S
Sbjct: 56 GNYKFCYTARGKPGNKPSVLMLHGFSAHKDMWLGMVKFLPKNLHLVCVDMPG--HEGTSR 113
Query: 92 TTRPERSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKV-VICC 148
+ S Q + + + +E+ + K LVG S GG V AAQ I + +IC
Sbjct: 114 SALDYYSICGQVKRIHQFVESIGLNKKPFHLVGTSMGGNVAGVYAAQHPTHISSLTLICP 173
Query: 149 SGVC--LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLS 206
+G+ +E + L+ + L+P + G++++++R F R +P +L
Sbjct: 174 AGLMYPIESKFLKQLKVLEKSGDNQRIPLIPSTAGEMEDMLRLCSFVRFK---IPQQVLQ 230
Query: 207 DYIDAMCTEYLEEKRELVRAIPKDRKI----SNIDKITQPTLILWGEHDQIFPLELGRRL 262
ID + E R+L A+ ++ N++KI PT I+WG+ DQ+ + L
Sbjct: 231 GLIDER-IPHNEFYRKLFLALVDEKSRHSLHENMNKIMAPTQIIWGKQDQVLDVSGAEVL 289
Query: 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304
L Q+ +++ GH+ E+P++ K + FL Q +
Sbjct: 290 AGSL-RGCQVEILENCGHSVVMERPRKSAKLMTDFLSSLQST 330
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Xenopus laevis (taxid: 8355) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|Q9BV23|ABHD6_HUMAN Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=ABHD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 28/276 (10%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP- 95
C+ + R KP ++++HG A+ +W +P +H V +P G TTR
Sbjct: 61 CYSFRGRPGHKPSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMP-----GHEGTTRSS 115
Query: 96 --ERSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151
+ S Q + + + +E + K LVG S GG V AA + + + + C
Sbjct: 116 LDDLSIDGQVKRIHQFVECLKLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLVCPAG 175
Query: 152 CLEEQD--LRDRMFKVSDLEEASKI-LVPQSPGKLKELMR---YTFFKRPPLSLVPSCLL 205
D R+ ++ KI L+P +P ++ E+++ Y FK VP +L
Sbjct: 176 LQYSTDNQFVQRLKELQGSAAVEKIPLIPSTPEEMSEMLQLCSYVRFK------VPQQIL 229
Query: 206 SDYIDAMCTEYLEEKRELVRAIPKDRKIS---NIDKITQPTLILWGEHDQIFPLELGRRL 262
+D ++ + + + + S N+DKI PT I+WG+ DQ+ + L
Sbjct: 230 QGLVDVRIPHNNFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADML 289
Query: 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ N Q+ +++ GH+ E+P++ K + FL
Sbjct: 290 AKSIA-NCQVELLENCGHSVVMERPRKTAKLIIDFL 324
|
Has 2-arachidonoylglycerol hydrolase activity (By similarity). May be a regulator of endocannabinoid signaling pathways. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 |
| >sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
S P ++LIHG+G N+ W + + F V PDLL G S R + S + A +
Sbjct: 36 SGPAILLIHGIGDNST-TWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMR 94
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
++ ++++++VG S GG V A QF + ++++++ +G ++ ++ R+ +
Sbjct: 95 DLLSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTKDVNIVFRLASLPM 154
Query: 168 LEEASKIL-VPQSPGKLKELMRYTFFKRPPLSL---VPSCL--LSDYIDAMCTEYLEEKR 221
EA +L +P ++ R SL +P+ L L D + +
Sbjct: 155 GSEAMALLRLPLVLPAVQIAGRIVGKAIGTTSLGHDLPNVLRILDDLPEPTASAAFGRT- 213
Query: 222 ELVRAIP--KDRKISNIDK--ITQ--PTLILWGEHDQIFPLELGRRLKSHLGDNA----Q 271
+RA+ + + ++ +D+ +T+ P I+WG D + P+ +H+ A Q
Sbjct: 214 --LRAVVDWRGQMVTMLDRCYLTEAIPVQIIWGTKDVVLPVR-----HAHMAHAAMPGSQ 266
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304
L + + +GH ++ P F ++ F+ ++P+
Sbjct: 267 LEIFEGSGHFPFHDDPARFIDIVERFMDTTEPA 299
|
Mycobacterium bovis (taxid: 1765) |
| >sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis GN=Rv2715 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 25/273 (9%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
S P ++LIHG+G N+ W + + F V PDLL G S R + S + A +
Sbjct: 36 SGPAILLIHGIGDNST-TWNGVHAKLAQRFTVIAPDLLGHGQSDKPRADYSVAAYANGMR 94
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
++ ++++++VG S GG V A QF + ++++++ +G ++ ++ R+ +
Sbjct: 95 DLLSVLDIERVTIVGHSLGGGVAMQFAYQFPQLVDRLILVSAGGVTKDVNIVFRLASLPM 154
Query: 168 LEEASKIL-VPQSPGKLKELMRYTFFKRPPLSL---VPSCL--LSDYIDAMCTEYLEEKR 221
EA +L +P ++ R SL +P+ L L D + +
Sbjct: 155 GSEAMALLRLPLVLPAVQIAGRIVGKAIGTTSLGHDLPNVLRILDDLPEPTASAAFGRT- 213
Query: 222 ELVRAIP--KDRKISNIDK--ITQ--PTLILWGEHDQIFPLELGRRLKSHLGDNA----Q 271
+RA+ + + ++ +D+ +T+ P I+WG D + P+ +H+ A Q
Sbjct: 214 --LRAVVDWRGQMVTMLDRCYLTEAIPVQIIWGTKDVVLPVR-----HAHMAHAAMPGSQ 266
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304
L + + +GH ++ P F ++ F+ ++P+
Sbjct: 267 LEIFEGSGHFPFHDDPARFIDIVERFMDTTEPA 299
|
Mycobacterium tuberculosis (taxid: 1773) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 315 | ||||||
| 224063239 | 318 | predicted protein [Populus trichocarpa] | 0.977 | 0.968 | 0.724 | 1e-138 | |
| 255545734 | 322 | abhydrolase domain containing, putative | 0.958 | 0.937 | 0.678 | 1e-125 | |
| 302141961 | 342 | unnamed protein product [Vitis vinifera] | 0.939 | 0.865 | 0.671 | 1e-122 | |
| 225459294 | 298 | PREDICTED: lipase 3 [Vitis vinifera] | 0.939 | 0.993 | 0.671 | 1e-122 | |
| 357489671 | 1030 | Leucine-rich repeat-containing protein [ | 0.958 | 0.293 | 0.642 | 1e-120 | |
| 449469865 | 303 | PREDICTED: monoacylglycerol lipase ABHD6 | 0.952 | 0.990 | 0.632 | 1e-116 | |
| 296090676 | 298 | unnamed protein product [Vitis vinifera] | 0.946 | 1.0 | 0.61 | 1e-116 | |
| 359497325 | 297 | PREDICTED: epoxide hydrolase 3-like, par | 0.942 | 1.0 | 0.608 | 1e-115 | |
| 359497420 | 321 | PREDICTED: lipase 3-like isoform 2 [Viti | 0.965 | 0.947 | 0.580 | 1e-113 | |
| 225448247 | 311 | PREDICTED: monoacylglycerol lipase ABHD6 | 0.958 | 0.971 | 0.605 | 1e-112 |
| >gi|224063239|ref|XP_002301056.1| predicted protein [Populus trichocarpa] gi|222842782|gb|EEE80329.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 223/308 (72%), Positives = 267/308 (86%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
MSRCFSFT KNWC +S F R G RS +TDL+DG+VMHCWVPKTR DS+PDL+LIHGLGA
Sbjct: 1 MSRCFSFTGTKNWCFRSTFTRSGLRSEITDLKDGTVMHCWVPKTRKDSRPDLLLIHGLGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NALWQW ++I + YFNVYVPDL+FFGDS+TTRPER+ESFQA+C+MRVMEAHSV+K SL
Sbjct: 61 NALWQWGDVIQDFVPYFNVYVPDLVFFGDSYTTRPERTESFQAQCLMRVMEAHSVQKFSL 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VGLSYGGFVGYSMAAQF E +E+VVICCSG+C+EE+DL + +F VSDLEEA +ILVPQSP
Sbjct: 121 VGLSYGGFVGYSMAAQFAEAVERVVICCSGICMEEKDLIEGVFAVSDLEEAGRILVPQSP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
KL+EL+ YTFF+ PP+ L+PSC L+D+IDAMC EY+EEKR+L+RA+PKDRK+S+I K+T
Sbjct: 181 DKLRELVGYTFFRPPPVRLIPSCFLADFIDAMCGEYVEEKRDLIRAVPKDRKLSDIPKLT 240
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WGEHD++FPLELG RLK HLGDNA L ++K GHAFN E+PKEF K LKSFL+D
Sbjct: 241 QPTLIIWGEHDRVFPLELGHRLKRHLGDNAHLTIVKNTGHAFNVERPKEFIKLLKSFLVD 300
Query: 301 SQPSPLPP 308
QP P P
Sbjct: 301 LQPPPGSP 308
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545734|ref|XP_002513927.1| abhydrolase domain containing, putative [Ricinus communis] gi|223547013|gb|EEF48510.1| abhydrolase domain containing, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/302 (67%), Positives = 254/302 (84%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
MSRCFSFTEAKN C S F ++G +S+ TDL+DG+V+HCWVPK+ SKP+L+LIHGLGA
Sbjct: 1 MSRCFSFTEAKNRCYISTFTKVGLQSTTTDLKDGTVIHCWVPKSPTQSKPNLLLIHGLGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQW ++I YFNVY+PDL+FFGDS+TTR +R+ESFQAECVMRVMEA+ V KLSL
Sbjct: 61 NAMWQWNDVIRRFTPYFNVYIPDLVFFGDSYTTRLDRTESFQAECVMRVMEANLVGKLSL 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VGLSYGGFVGYS+AA++KE +E+VVICCSG+C+EE+DLR+ +F VSDLEEA+ ILVP P
Sbjct: 121 VGLSYGGFVGYSIAAEYKEVVERVVICCSGICMEEKDLREGVFTVSDLEEAASILVPLKP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
KL++L+ +TF+K PPL L+P C L D+IDAMC +Y+ +K+EL+RAIPKDRK+SN+ KIT
Sbjct: 181 DKLRQLVGFTFYKPPPLGLIPDCFLIDFIDAMCRDYVTQKKELIRAIPKDRKLSNVPKIT 240
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WGEHD+IFP+ELG RLK HLGDNA L VI AGHA N E KE+ K LKSFL+D
Sbjct: 241 QPTLIIWGEHDRIFPVELGYRLKRHLGDNAHLAVINNAGHAINMENKKEYIKLLKSFLVD 300
Query: 301 SQ 302
Q
Sbjct: 301 LQ 302
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302141961|emb|CBI19164.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 255/298 (85%), Gaps = 2/298 (0%)
Query: 4 CFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANAL 63
CFSFT ++WC +S F + G RS++TDL DG+V+HCWVPKTR +SKP+L+LIHG GANAL
Sbjct: 47 CFSFTATRDWCYRSIFTKSGLRSTITDLGDGTVIHCWVPKTRKESKPNLLLIHGFGANAL 106
Query: 64 WQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGL 123
WQW ++IP+++ YFNVYVPDLLFFGDS+TTRPER+ESFQA+CVMRVMEA SVKK+SL+GL
Sbjct: 107 WQWGDLIPYLVPYFNVYVPDLLFFGDSYTTRPERTESFQAQCVMRVMEAKSVKKMSLIGL 166
Query: 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183
SYGGFVGYSMAAQFKE IE+VVIC +GVCLEE+DL +FKVS +E+A+ IL+PQ+P KL
Sbjct: 167 SYGGFVGYSMAAQFKEAIERVVICGAGVCLEEKDLEKGLFKVSHIEDAASILLPQTPEKL 226
Query: 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243
+EL+ YTF+K PP L PSCLL+D+I MCTE++EE+++L+RAIPKDRK+S + I QPT
Sbjct: 227 RELLSYTFYK-PPRGL-PSCLLNDFIQVMCTEFVEERKDLIRAIPKDRKLSELPTIPQPT 284
Query: 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301
LI+WG+ D++FP+EL RLK HLG+ AQL++I AGH F EKPKE +K+LKSFL+D+
Sbjct: 285 LIIWGDQDKVFPVELAHRLKRHLGEEAQLVIISNAGHTFIIEKPKETFKYLKSFLIDN 342
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225459294|ref|XP_002285791.1| PREDICTED: lipase 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 255/298 (85%), Gaps = 2/298 (0%)
Query: 4 CFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANAL 63
CFSFT ++WC +S F + G RS++TDL DG+V+HCWVPKTR +SKP+L+LIHG GANAL
Sbjct: 3 CFSFTATRDWCYRSIFTKSGLRSTITDLGDGTVIHCWVPKTRKESKPNLLLIHGFGANAL 62
Query: 64 WQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGL 123
WQW ++IP+++ YFNVYVPDLLFFGDS+TTRPER+ESFQA+CVMRVMEA SVKK+SL+GL
Sbjct: 63 WQWGDLIPYLVPYFNVYVPDLLFFGDSYTTRPERTESFQAQCVMRVMEAKSVKKMSLIGL 122
Query: 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183
SYGGFVGYSMAAQFKE IE+VVIC +GVCLEE+DL +FKVS +E+A+ IL+PQ+P KL
Sbjct: 123 SYGGFVGYSMAAQFKEAIERVVICGAGVCLEEKDLEKGLFKVSHIEDAASILLPQTPEKL 182
Query: 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243
+EL+ YTF+K PP L PSCLL+D+I MCTE++EE+++L+RAIPKDRK+S + I QPT
Sbjct: 183 RELLSYTFYK-PPRGL-PSCLLNDFIQVMCTEFVEERKDLIRAIPKDRKLSELPTIPQPT 240
Query: 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301
LI+WG+ D++FP+EL RLK HLG+ AQL++I AGH F EKPKE +K+LKSFL+D+
Sbjct: 241 LIIWGDQDKVFPVELAHRLKRHLGEEAQLVIISNAGHTFIIEKPKETFKYLKSFLIDN 298
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357489671|ref|XP_003615123.1| Leucine-rich repeat-containing protein [Medicago truncatula] gi|355516458|gb|AES98081.1| Leucine-rich repeat-containing protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 194/302 (64%), Positives = 245/302 (81%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M++CFS TE +NWC +S F G RS++TDL+DG++MHCW+PKTR +SKP+L+LIHGLGA
Sbjct: 1 MTQCFSLTETRNWCYRSTFTGAGLRSTITDLKDGTIMHCWIPKTRTESKPNLLLIHGLGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NALWQW + I + FNVYVPDL+FFG S+T+RPER+E FQAECVM+VME V+ +S+
Sbjct: 61 NALWQWGHFIRSLTQLFNVYVPDLVFFGGSYTSRPERTEGFQAECVMKVMEMKCVRSVSV 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VGLSYGGFV YS+ ++KE +EKVVIC SGV LEE+D++D F VSDL+EA+ ILVPQ+P
Sbjct: 121 VGLSYGGFVAYSLGVKYKEFVEKVVICGSGVSLEEKDIKDGFFPVSDLDEAANILVPQTP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
KL+EL Y FF+ L+ +PSC L D+I MC EY++EKR+L+RAI KDR +S++ KI+
Sbjct: 181 QKLRELFGYAFFRPRRLAWLPSCFLHDFIHTMCREYVQEKRDLIRAIAKDRNLSDLPKIS 240
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WGEHDQ+FPLELG RLK HLGDNAQ++VIK AGHAF EK KEFY LKSFL+D
Sbjct: 241 QPTLIIWGEHDQVFPLELGHRLKRHLGDNAQIVVIKNAGHAFCVEKAKEFYNTLKSFLVD 300
Query: 301 SQ 302
S
Sbjct: 301 SH 302
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449469865|ref|XP_004152639.1| PREDICTED: monoacylglycerol lipase ABHD6-like [Cucumis sativus] gi|449503939|ref|XP_004162233.1| PREDICTED: monoacylglycerol lipase ABHD6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/302 (63%), Positives = 250/302 (82%), Gaps = 2/302 (0%)
Query: 1 MSRCFSFT--EAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGL 58
M++CF F+ E KNW + F + G RS++TDL+DG+ +HCWVPK +KP+L+LIHG+
Sbjct: 1 MTKCFFFSIVETKNWFHRYSFTKSGLRSTITDLKDGTTVHCWVPKNPIHTKPNLLLIHGI 60
Query: 59 GANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKL 118
GANALWQW + IP +I YFN+Y+PDL+FFGDSFTT+P+R+E FQA+C++RVMEA++V K
Sbjct: 61 GANALWQWGDFIPALIPYFNLYIPDLIFFGDSFTTQPDRTEWFQAQCLIRVMEANTVGKF 120
Query: 119 SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178
SLVGLSYGGFVGYS+AA E +E+VVICCSGVC+EE+D +D + KVS LE+A+ ILVPQ
Sbjct: 121 SLVGLSYGGFVGYSIAALRPEMVERVVICCSGVCVEEKDFKDGLLKVSALEDATAILVPQ 180
Query: 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDK 238
P KLK+L+ Y+FF+ PPL L+PSCLL+D+I++MC +++EEKREL+R IP+ RK+S++ K
Sbjct: 181 KPEKLKQLVGYSFFRPPPLRLIPSCLLNDFIESMCLDHIEEKRELIRTIPRGRKLSDLPK 240
Query: 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
I Q T+I+WGEHDQ+FPLELG RLK HLGDNA L+VIK GHAFN E+PKEF HL SFL
Sbjct: 241 IQQRTMIMWGEHDQVFPLELGHRLKRHLGDNATLVVIKNTGHAFNSEEPKEFLSHLISFL 300
Query: 299 LD 300
+D
Sbjct: 301 VD 302
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296090676|emb|CBI14844.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 183/300 (61%), Positives = 247/300 (82%), Gaps = 2/300 (0%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M++CFSFT ++WC + F G RS+ +DL DG+VMHCW+PK R ++KP+LVLIHG+GA
Sbjct: 1 MAKCFSFTATRDWCFRLSFSNAGLRSTTSDLGDGTVMHCWIPKARKENKPNLVLIHGMGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQW + I +I FNVYVPDL+FFGDS+TTRPERSESFQA+CVMR++E H V ++++
Sbjct: 61 NAMWQWADFIRPLIARFNVYVPDLVFFGDSYTTRPERSESFQAQCVMRMIEGHGVSRMNV 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VG+SYGGFV Y +A QF +E+ V+CC+GVCLEE+D+ MF+VS +E+A+ IL+PQ+P
Sbjct: 121 VGISYGGFVAYRIAEQFPAAVERSVLCCAGVCLEEKDMEAGMFQVSSVEDAASILLPQTP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
K++ELMR +F K P++ +PSC L+D+ID MCTE+L+E+REL+RA+ KDRK+SN+ KIT
Sbjct: 181 EKVRELMRISFAK--PINTMPSCFLNDFIDVMCTEHLQERRELIRALHKDRKLSNLPKIT 238
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WGE D++FPLEL RLK H+G+NA+L++IK AGHA N EKPKE K+LKSFL+D
Sbjct: 239 QPTLIIWGELDRVFPLELAHRLKRHIGENAELVIIKNAGHAINAEKPKELCKYLKSFLID 298
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359497325|ref|XP_002262933.2| PREDICTED: epoxide hydrolase 3-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 182/299 (60%), Positives = 246/299 (82%), Gaps = 2/299 (0%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M++CFSFT ++WC + F G RS+ +DL DG+VMHCW+PK R ++KP+LVLIHG+GA
Sbjct: 1 MAKCFSFTATRDWCFRLSFSNAGLRSTTSDLGDGTVMHCWIPKARKENKPNLVLIHGMGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQW + I +I FNVYVPDL+FFGDS+TTRPERSESFQA+CVMR++E H V ++++
Sbjct: 61 NAMWQWADFIRPLIARFNVYVPDLVFFGDSYTTRPERSESFQAQCVMRMIEGHGVSRMNV 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VG+SYGGFV Y +A QF +E+ V+CC+GVCLEE+D+ MF+VS +E+A+ IL+PQ+P
Sbjct: 121 VGISYGGFVAYRIAEQFPAAVERSVLCCAGVCLEEKDMEAGMFQVSSVEDAASILLPQTP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
K++ELMR +F K P++ +PSC L+D+ID MCTE+L+E+REL+RA+ KDRK+SN+ KIT
Sbjct: 181 EKVRELMRISFAK--PINTMPSCFLNDFIDVMCTEHLQERRELIRALHKDRKLSNLPKIT 238
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299
QPTLI+WGE D++FPLEL RLK H+G+NA+L++IK AGHA N EKPKE K+LKSFL+
Sbjct: 239 QPTLIIWGELDRVFPLELAHRLKRHIGENAELVIIKNAGHAINAEKPKELCKYLKSFLI 297
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359497420|ref|XP_002263605.2| PREDICTED: lipase 3-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 250/310 (80%), Gaps = 6/310 (1%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M++C SFT ++WC + F G RS+ +DL DG+VMHCW+PK+R ++KP+L+LIHG+GA
Sbjct: 1 MAKCCSFTATRDWCFRLSFSNAGLRSTTSDLGDGTVMHCWIPKSRKENKPNLLLIHGMGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQW + I +I FNVYVPDL+FFGDS+TTRPERSESFQA+CV+R+ME H V ++++
Sbjct: 61 NAMWQWADFIRPLIARFNVYVPDLVFFGDSYTTRPERSESFQAQCVIRMMEGHGVSRMNV 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VG+SYGGFV Y +A QF +E++V+CC+GVC+EE+D+ MF+VS +E+A+ +L+PQ+P
Sbjct: 121 VGISYGGFVAYRIAEQFPAAVERLVLCCAGVCMEEKDMEAGMFQVSSVEDAASLLLPQTP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
K++EL+R +F K P++ +PSC L+D+ID MCTE+L+E+R L+ A+ KDRK+SN+ KIT
Sbjct: 181 EKVRELVRISFAK--PINTMPSCFLNDFIDVMCTEHLQERRALIMALHKDRKLSNLPKIT 238
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WGE D++FPLEL RLK H+G+NA+L++IK GHA N EKPKE K+LKSFL+D
Sbjct: 239 QPTLIIWGELDRVFPLELAHRLKRHIGENAELVIIKNVGHAINAEKPKELCKYLKSFLMD 298
Query: 301 SQPSPLPPSN 310
PLPP N
Sbjct: 299 ----PLPPQN 304
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225448247|ref|XP_002272747.1| PREDICTED: monoacylglycerol lipase ABHD6 [Vitis vinifera] gi|296086835|emb|CBI32984.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 184/304 (60%), Positives = 243/304 (79%), Gaps = 2/304 (0%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M++CFSF +++W + F G RS +TDL +G+VMHCWVPK +KP+LVL+HG GA
Sbjct: 1 MAKCFSFAASRDWWYRYSFTSAGLRSVLTDLGEGTVMHCWVPKCHRQTKPNLVLVHGFGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQ+ ++ H I FN+YVPDLLFFG SFTTRPER+E+FQAECVM++ME H V+K++L
Sbjct: 61 NAMWQYGYLLRHFIQRFNIYVPDLLFFGRSFTTRPERTEAFQAECVMKMMETHGVRKMNL 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
VG+SYGGFVGY+MA QF E +E++V+CC+GVCLEE+D+ +F VSDLEEA+ L+PQ+P
Sbjct: 121 VGVSYGGFVGYNMAVQFPEAMERLVLCCTGVCLEEKDMEQSLFAVSDLEEAASTLMPQTP 180
Query: 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
KL+ELM+ +F K P+ VP+ L+D+ID MCT+++EEKREL++ I KDRK+ N+ KIT
Sbjct: 181 EKLRELMKLSFVK--PVKGVPNYFLTDFIDVMCTDHVEEKRELLQMILKDRKLINLPKIT 238
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
QPTLI+WG+ DQIFP+EL RL+ HLG+NA+L+VIK GHA N EKP EF KHLKSFL+D
Sbjct: 239 QPTLIVWGDQDQIFPIELAYRLERHLGENAKLVVIKNTGHAVNLEKPGEFAKHLKSFLID 298
Query: 301 SQPS 304
S S
Sbjct: 299 SSQS 302
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 315 | ||||||
| TAIR|locus:2184777 | 311 | AT5G09430 [Arabidopsis thalian | 0.939 | 0.951 | 0.574 | 4.7e-96 | |
| TAIR|locus:2194744 | 314 | AT1G78210 [Arabidopsis thalian | 0.952 | 0.955 | 0.580 | 1.4e-94 | |
| TAIR|locus:505006573 | 328 | AT4G39955 [Arabidopsis thalian | 0.939 | 0.902 | 0.558 | 2.1e-93 | |
| TAIR|locus:2125909 | 307 | AT4G33180 [Arabidopsis thalian | 0.939 | 0.964 | 0.325 | 2e-40 | |
| TAIR|locus:2018856 | 332 | AT1G17430 [Arabidopsis thalian | 0.863 | 0.819 | 0.327 | 3.5e-36 | |
| TAIR|locus:2062126 | 313 | AT2G18360 "AT2G18360" [Arabido | 0.911 | 0.916 | 0.309 | 1.2e-35 | |
| TAIR|locus:2115435 | 317 | AT4G36610 [Arabidopsis thalian | 0.914 | 0.908 | 0.302 | 9.5e-34 | |
| UNIPROTKB|Q1LZ86 | 337 | ABHD6 "Monoacylglycerol lipase | 0.815 | 0.762 | 0.235 | 2e-13 | |
| MGI|MGI:1913332 | 336 | Abhd6 "abhydrolase domain cont | 0.793 | 0.744 | 0.248 | 5.1e-13 | |
| UNIPROTKB|E2QVK3 | 337 | ABHD6 "Uncharacterized protein | 0.815 | 0.762 | 0.228 | 1.3e-12 |
| TAIR|locus:2184777 AT5G09430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 174/303 (57%), Positives = 233/303 (76%)
Query: 3 RCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGS-----VMHCWVPKTRNDSKPDLVLIHG 57
RCFSFT +++W + F G RS TDL G+ MHCW+PK+ N SKP+L+L+HG
Sbjct: 9 RCFSFTASRDWLFRQSFANAGLRSVTTDLSHGNSIASTAMHCWIPKSPNRSKPNLLLLHG 68
Query: 58 LGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKK 117
GANA+WQ+ + FNVYVPDLLFFG S T+ P R+ESFQA C+MR+MEAH V++
Sbjct: 69 FGANAMWQYGEHLRAFTGRFNVYVPDLLFFGLSSTSEPNRTESFQARCLMRLMEAHGVQR 128
Query: 118 LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177
+++VG+SYGGFVGYS+AAQF E +EK+V+CC+GVCLEE+D+ D +FKV +LEEA+ IL+P
Sbjct: 129 MNIVGISYGGFVGYSLAAQFPENVEKLVLCCAGVCLEEKDMEDGLFKVPNLEEATGILIP 188
Query: 178 QSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDAMCTEYLEEKRELVRAIPKDRKISNID 237
Q+P KLKEL+R++F K D+ID MCTE++EEKR+L+++I KDR++S++
Sbjct: 189 QTPEKLKELIRFSFVKPIKGVPSFFLW--DFIDVMCTEFVEEKRDLIKSILKDRRLSDLP 246
Query: 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSF 297
+I Q +LI+WGE DQIFPLELG RLK H+G++A+++VIKKAGHA N EK KEF KHLKSF
Sbjct: 247 RIKQKSLIIWGEEDQIFPLELGYRLKRHIGESAEIVVIKKAGHAVNLEKSKEFVKHLKSF 306
Query: 298 LLD 300
L+D
Sbjct: 307 LID 309
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| TAIR|locus:2194744 AT1G78210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 176/303 (58%), Positives = 232/303 (76%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKP--DLVLIHGL 58
M+ CFS +EA KS FKR G R DL+DG+V++ WV KT+ +SKP +L+LIHGL
Sbjct: 1 MTGCFSLSEALERTYKSGFKRSGLRPVTIDLKDGTVVNFWVSKTKPESKPKPNLLLIHGL 60
Query: 59 GANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKL 118
GA A+WQW ++ + YFN+Y+PDL+FFG S TTRPERS+ FQA+ +MR +EA SVKK
Sbjct: 61 GATAIWQWYDVARRLSRYFNLYIPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVKKF 120
Query: 119 SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178
SLVGLSYGGFVGY MA+ + + +EKVVICC+ VC+EE+D++ +FKVSDL+EASKILVP+
Sbjct: 121 SLVGLSYGGFVGYRMASMYADAVEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKILVPE 180
Query: 179 SPGKLKELMRYTFFKRXXXXXXXXXXXXDYID-AMCTEYLEEKRELVRAIPKDRKISNID 237
S KL+ELM Y F+K D+I+ A+ + +EEKREL++AIPKDR IS I
Sbjct: 181 SVKKLRELMGYIFYKPALARLVPTCLLHDFIEHALTRDNMEEKRELIKAIPKDRIISEIP 240
Query: 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSF 297
K+ QPTLI+WGEHDQ+FPLE+G+RL+ H+GDN +L++IK+ GH FN+EKPK+F K LKSF
Sbjct: 241 KLKQPTLIIWGEHDQVFPLEMGKRLEKHVGDNGKLVIIKRTGHIFNFEKPKKFIKLLKSF 300
Query: 298 LLD 300
LL+
Sbjct: 301 LLE 303
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| TAIR|locus:505006573 AT4G39955 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 167/299 (55%), Positives = 222/299 (74%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
M+ CFS+ ++N C + F R G RSS +DL DG+V HCW+P T +KP L+L+HG+GA
Sbjct: 1 MASCFSYVSSRNKCYQYSFSRAGLRSSTSDLGDGTVFHCWIPLTHIHTKPTLLLLHGIGA 60
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120
NA+WQW I I FNVYVPDL+FFGDS+TTRP+RSESFQA CVM+ M+A+ V+ +++
Sbjct: 61 NAMWQWDRFIDRFIPRFNVYVPDLIFFGDSYTTRPDRSESFQATCVMKAMDAYGVRTMTV 120
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180
GLSYGGFV YS+AAQFKE++++VV+ C+GV LEE+D D MFKV EEA+ +L PQSP
Sbjct: 121 AGLSYGGFVAYSLAAQFKERVDRVVLICAGVALEEKDSEDGMFKVKSPEEAAAVLFPQSP 180
Query: 181 GKLKELMRYTFFKRXXXXXXXXXXXXDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
L+ L++ +F+K DYI MC +YL+E++ELV A+ K R+ +N+ KIT
Sbjct: 181 SMLRRLLQLSFYKPPIWIPSCFAM--DYIHVMCKDYLQERKELVEALHKGRRFANLPKIT 238
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
QPTL++WGE DQ+FP+EL RLK +LG D AQL+++KK GHA N EKPKE YKH+KSFL
Sbjct: 239 QPTLMIWGEEDQVFPVELAHRLKRYLGEDRAQLVLLKKTGHAINEEKPKEMYKHMKSFL 297
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| TAIR|locus:2125909 AT4G33180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 99/304 (32%), Positives = 158/304 (51%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKT----RNDSKPDLVLIH 56
+S S T L+ C + G S + + +H W P +D +P ++L+H
Sbjct: 3 LSSYLSPTRLLEGYLRRCLRAAGLTSQTLSIDSETTIHFWGPPPLDHRSDDDRPVMLLLH 62
Query: 57 GLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV 115
G G +++WQW + F VY PDL+FFGDS ++ R+E FQAEC+ ++M +
Sbjct: 63 GFGPSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMAKIGI 122
Query: 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175
K ++ G SYGGFV Y MA + EK+EKVVI SG+ + + D + + + S+ E K++
Sbjct: 123 GKYNVAGTSYGGFVAYHMAKMWPEKVEKVVIASSGINMRKCD-GESLLQRSNCECIEKVM 181
Query: 176 VPQSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDAMCTEYLEEKRELVRAIPKDRKIS- 234
+P + + + LM R D I+ + + +EK EL++ + R +
Sbjct: 182 LPSTATEFRTLMALASSWRLVRMFPDALWN-DVINNLYKKNRKEKIELLKGVTFGRSENL 240
Query: 235 NIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHL 294
NID ++Q LI+WG+ DQIFP+++ LK LGD +L +I H E +EF +
Sbjct: 241 NIDSLSQEVLIVWGDKDQIFPVKMAYELKEILGDKTKLEIIDNTSHVPQIECAQEFNNIV 300
Query: 295 KSFL 298
FL
Sbjct: 301 LRFL 304
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| TAIR|locus:2018856 AT1G17430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 92/281 (32%), Positives = 151/281 (53%)
Query: 25 RSSVTDLQDG-SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD 83
R DL DG + +H W+ R S+ +LV++HG G N+ WQ+ + + + FN+++PD
Sbjct: 53 RPVTVDLDDGETTVHFWISGHRRISRQNLVMLHGYGGNSKWQFVHQVSDLSKSFNLFIPD 112
Query: 84 LLFFGDSFTTRPERSESFQAECVMRVMEAHSVKK----LSLVGLSYGGFVGYSMAAQFKE 139
L+FFG S++ +RS QA V+ ++ + +S+ +SYGGFV Y MA +
Sbjct: 113 LVFFGKSYSKNRDRSVEIQARSVVGGLKKLGCVEGGGGISIYSISYGGFVAYKMAEIWPA 172
Query: 140 KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRXXXXX 199
+EK+VI SGV +Q + K + SKILVP++P L+ L++ +
Sbjct: 173 MVEKLVIVSSGVGFTQQQKTAELKKHGG--DCSKILVPKTPMDLRLLIKISMNTGLTFVD 230
Query: 200 XX-XXXXXDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258
+I M + +E EL + + + + + I+Q TLI+WG+ D++FPLE
Sbjct: 231 WVPDFFLSQFIAVMYEKNRQELLELAKNLLEREEEPELPVISQKTLIVWGDKDKVFPLEH 290
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299
RL+ HL +++L +IK+ GHA N E P + SF+L
Sbjct: 291 AYRLQRHL-QSSRLEIIKETGHAVNIEAPTTLNNFITSFVL 330
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| TAIR|locus:2062126 AT2G18360 "AT2G18360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 96/310 (30%), Positives = 156/310 (50%)
Query: 6 SFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKT------RND----------SK 49
+F + + L K G +L+ G+ M+ W+PK ++D +K
Sbjct: 3 NFVDLQKPLLYRLMKLAGVIPYTVELEPGTKMNFWIPKETLKKTKKSDKNFAVEPQKPTK 62
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRV 109
P L+ IHG A + W + + ++VY+PDLLFFG S++ +RS +FQA C+++
Sbjct: 63 PVLLFIHGFAAEGIVTWQFQVGSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQAHCLVKS 122
Query: 110 MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDL 168
+ ++K +LVG SYGG V + +A ++ E ++ +V+ SG L D + +
Sbjct: 123 LRILGIEKFTLVGFSYGGMVAFKIAEEYPEMVQAMVV--SGSILAMTDTISESNLNQLGF 180
Query: 169 EEASKILVPQSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDAMCTEYLEEKRELVRAIP 228
+ ++ +L+P S LK L K D+I+ M T +E+ EL+ A+
Sbjct: 181 KSSADLLLPTSVKGLKTLFTLAVHKPMWFPKRLFK---DFIEVMITNR-KERAELLEALV 236
Query: 229 KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPK 288
K I + Q +LWGE DQIF LE + +K LG+NA + IKKAGH + E+P
Sbjct: 237 ISNKDVTIPRFQQKIHLLWGESDQIFNLEFAKSMKEQLGENATMESIKKAGHLAHLERPC 296
Query: 289 EFYKHLKSFL 298
+ + LK FL
Sbjct: 297 VYNRRLKKFL 306
|
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| TAIR|locus:2115435 AT4G36610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 93/307 (30%), Positives = 147/307 (47%)
Query: 6 SFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPK--------TRNDSKPD------ 51
+F E + L K G +++ G+ ++ WVPK T +KPD
Sbjct: 3 NFVEVQKPLLYGLMKMAGVVPYTLEIEPGTKINFWVPKETLKKNSGTGKPTKPDKPKKPV 62
Query: 52 LVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME 111
++LIHG + W + + ++VY+PDLLFFG S+T +RS +FQA+C+++ +
Sbjct: 63 VLLIHGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKGLR 122
Query: 112 AHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171
V K VG SYGG V + +A + + + +V+ S + + + + +
Sbjct: 123 ILGVDKFVPVGFSYGGMVAFKIAEAYPDMVRAIVVSGSIPTMTDT-INEASLNRLGFSSS 181
Query: 172 SKILVPQSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDAMCTEYLEEKRELVRAIPKDR 231
+ +L+P S LK L K DYI+ M +E+ EL+ A+
Sbjct: 182 TDLLLPTSVTGLKALFTIAVHKPLWFPKRLFK---DYIEVMFNNR-KERAELLEAVVVSN 237
Query: 232 KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFY 291
K + I + LWGE DQIF LEL R +K +G+NA + IKKAGH E+P +
Sbjct: 238 KEAQIPHFPRKIHFLWGESDQIFDLELARDMKEQIGENATIESIKKAGHLVQLERPCVYN 297
Query: 292 KHLKSFL 298
+ LK FL
Sbjct: 298 RRLKKFL 304
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| UNIPROTKB|Q1LZ86 ABHD6 "Monoacylglycerol lipase ABHD6" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 192 (72.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 63/267 (23%), Positives = 121/267 (45%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
C+ + R KP ++++HG A+ +W +P +H V +P G + ++ +
Sbjct: 61 CYSFRGRPGHKPSILMLHGFSAHKDMWLSMVKFLPKNLHLVCVDMPG--HEGTTRSSLDD 118
Query: 97 RSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKV-VICCSGVCL 153
S Q + + + +E + K LVG S GG V AA + + + ++C +G+
Sbjct: 119 LSIDGQVKRIHQFVECLKLNKKPFHLVGTSMGGHVAGVYAAHYPSDVCSLSLVCPAGLQY 178
Query: 154 E-EQDLRDRMFKVSDLEEASKI-LVPQSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDA 211
+ R+ ++ + KI L+P +P ++ E+++ + R D
Sbjct: 179 STDNKFVQRLKELQESAAVEKIPLIPTTPKEMSEMLQLCSYVRFKVPQQILQGLVDVRIP 238
Query: 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
T Y + E+V + N+DKI PT I+WG+ DQ+ + L + N+Q
Sbjct: 239 HNTFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIA-NSQ 297
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ +++ GH+ E+P++ K L FL
Sbjct: 298 VELLENCGHSVVMERPRKTAKLLVDFL 324
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| MGI|MGI:1913332 Abhd6 "abhydrolase domain containing 6" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 189 (71.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 68/274 (24%), Positives = 126/274 (45%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
C+ + R KP ++++HG A+ +W +P +H V +P G TTR
Sbjct: 61 CYSFRGRPGHKPSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMP-----GHEGTTRSS 115
Query: 97 RSE-SF--QAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKV-VICCSG 150
+ S Q + + + +E + K L+G S GG V AA + + + ++C +G
Sbjct: 116 LDDLSIVGQVKRIHQFVECLKLNKKPFHLIGTSMGGHVAGVYAAYYPSDVCSLSLVCPAG 175
Query: 151 VCLEEQDLRDRMF--KVSDLEEASKI----LVPQSPGKLKELMRYTFFKRXXXXXXXXXX 204
+ Q D F ++ +LEE++ I L+P +P ++ E+++ + R
Sbjct: 176 L----QYSTDNPFVQRLKELEESAAIQKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQG 231
Query: 205 XXDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264
D + Y + E+V + N+DKI PT I+WG+ DQ+ + G + +
Sbjct: 232 LVDVRIPHNSFYRKLFLEIVNEKSRYSLHENMDKIKVPTQIIWGKQDQVLDVS-GADILA 290
Query: 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
N+Q+ V++ GH+ E+P++ K + FL
Sbjct: 291 KSISNSQVEVLENCGHSVVMERPRKTAKLIVDFL 324
|
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| UNIPROTKB|E2QVK3 ABHD6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 186 (70.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 61/267 (22%), Positives = 119/267 (44%)
Query: 39 CWVPKTRNDSKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE 96
C+ + R KP ++++HG A+ +W +P +H V +P G + ++ +
Sbjct: 61 CYSFRGRPGPKPSILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMPG--HEGTTRSSLDD 118
Query: 97 RSESFQAECVMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQFKEKIEKV-VICCSGVCL 153
S Q + + + +E + K L+G S GG V AA + + + ++C +G+
Sbjct: 119 LSIDGQVKRIHQFVECLKLNKKPFHLIGTSMGGHVAGVYAAYYPSDVCSLCLVCPAGLQY 178
Query: 154 E-EQDLRDRMFKVSDLEEASKI-LVPQSPGKLKELMRYTFFKRXXXXXXXXXXXXDYIDA 211
+ R+ ++ D KI L+P +P ++ E+++ + R D
Sbjct: 179 STDNQFVQRLKELQDSAAVEKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIP 238
Query: 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
Y + E+V + N+DKI PT I+WG+ DQ+ + L + N Q
Sbjct: 239 HNNFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADMLAKSIA-NCQ 297
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ +++ GH+ E+P++ K + FL
Sbjct: 298 VELLENCGHSVVMERPRKTAKLIVDFL 324
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 4.1.2.37 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00020896 | hypothetical protein (318 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 315 | |||
| COG0596 | 282 | COG0596, MhpC, Predicted hydrolases or acyltransfe | 2e-32 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 6e-30 | |
| pfam00561 | 226 | pfam00561, Abhydrolase_1, alpha/beta hydrolase fol | 2e-19 | |
| TIGR01738 | 245 | TIGR01738, bioH, pimelyl-[acyl-carrier protein] me | 6e-13 | |
| TIGR02427 | 251 | TIGR02427, protocat_pcaD, 3-oxoadipate enol-lacton | 1e-12 | |
| PLN02578 | 354 | PLN02578, PLN02578, hydrolase | 2e-10 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 3e-09 | |
| PRK14875 | 371 | PRK14875, PRK14875, acetoin dehydrogenase E2 subun | 4e-09 | |
| TIGR03343 | 282 | TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenyl | 1e-08 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 3e-08 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 5e-08 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 5e-07 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 1e-06 | |
| PLN02894 | 402 | PLN02894, PLN02894, hydrolase, alpha/beta fold fam | 1e-06 | |
| TIGR03611 | 248 | TIGR03611, RutD, pyrimidine utilization protein D | 1e-05 | |
| TIGR01250 | 289 | TIGR01250, pro_imino_pep_2, proline-specific pepti | 2e-05 | |
| TIGR03056 | 278 | TIGR03056, bchO_mg_che_rel, putative magnesium che | 5e-05 | |
| COG1647 | 243 | COG1647, COG1647, Esterase/lipase [General functio | 5e-05 | |
| TIGR03695 | 252 | TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cy | 9e-05 | |
| pfam01738 | 215 | pfam01738, DLH, Dienelactone hydrolase family | 3e-04 | |
| COG2021 | 368 | COG2021, MET2, Homoserine acetyltransferase [Amino | 5e-04 | |
| PRK10349 | 256 | PRK10349, PRK10349, carboxylesterase BioH; Provisi | 6e-04 | |
| PLN02824 | 294 | PLN02824, PLN02824, hydrolase, alpha/beta fold fam | 6e-04 | |
| PRK00870 | 302 | PRK00870, PRK00870, haloalkane dehalogenase; Provi | 0.001 | |
| PLN02980 | 1655 | PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ | 0.003 |
| >gnl|CDD|223669 COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 121 bits (303), Expect = 2e-32
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 13/263 (4%)
Query: 47 DSKPDLVLIHGLGANA-LWQWTN-IIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAE 104
P LVL+HG ++ +W+ ++P + + V PDL G S S S A+
Sbjct: 19 GGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--PAGYSLSAYAD 76
Query: 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLRDRMF 163
+ +++A ++K+ LVG S GG V ++A + +++ +V+ +
Sbjct: 77 DLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPA 136
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
+ L + +L+ L+ + + L +
Sbjct: 137 GAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARA 196
Query: 224 VRAIPKDRKISNID--------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI 275
RA ++ +D +IT PTLI+ GE D + P EL RRL + L ++A+L+VI
Sbjct: 197 ARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVI 256
Query: 276 KKAGHAFNYEKPKEFYKHLKSFL 298
AGH + E P+ F L +FL
Sbjct: 257 PGAGHFPHLEAPEAFAAALLAFL 279
|
Length = 282 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 6e-30
Identities = 56/243 (23%), Positives = 91/243 (37%), Gaps = 57/243 (23%)
Query: 52 LVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSF-TTRPERSESFQAECVMRVM 110
+VL+HG G +A W + + + V PDL GDS R S A + ++
Sbjct: 1 VVLLHGAGGSA-ESWRPLAEALAAGYRVLAPDLPGHGDSDGPPRTPYSLEDDAADLAALL 59
Query: 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEE 170
+A + + LVG S GG V + AA+ E++ +V+ + +DL +
Sbjct: 60 DALGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLISPPL----RDLEE---------- 105
Query: 171 ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKD 230
L+ L L+R +
Sbjct: 106 ----LLAADAAALLALLRAALLDADLREALA----------------------------- 132
Query: 231 RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEF 290
++T P L++ GE D + P E RRL L A+L+V+ AGH + E P+E
Sbjct: 133 -------RLTVPVLVIHGEDDPLVPPEAARRLAEALP-GAELVVLPGAGHLPHLEHPEEV 184
Query: 291 YKH 293
+
Sbjct: 185 AEA 187
|
This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|201306 pfam00561, Abhydrolase_1, alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 2e-19
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 77 FNVYVPDLLFFGDSFTTRPE---RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSM 133
F+V DL FG S + R + AE + +++A + K++LVG S GG + +
Sbjct: 1 FDVIAFDLRGFGRSSPPKDFADYRFDDL-AEDLEALLDALGLDKVNLVGHSMGGLIALAY 59
Query: 134 AAQFKEKIEKVVICCSGV--CLEEQDLRDRMFKVS--------DLEEASKILVPQSPGKL 183
AA++ ++++ +V V L R + L ++ + L+ ++ +
Sbjct: 60 AAKYPDRVKALV-LVGTVHPAGLSSPLTPRGNLLGLLLDNFFNRLYDSVEALLGRAIKQF 118
Query: 184 KELMRYT---FFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT 240
+ L R F K+ LS + + +D + L LV K I
Sbjct: 119 QALGRPFVSDFLKQFELSSLIRFGETLALDGLLGYALGYD--LVWDRSAALK-----DID 171
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEF 290
PTLI+WG+ D + P + +L + NAQL+VI AGH EKP E
Sbjct: 172 VPTLIIWGDDDPLVPPDASEKLAALFP-NAQLVVIDDAGHLAQLEKPDEV 220
|
This catalytic domain is found in a very wide range of enzymes. Length = 226 |
| >gnl|CDD|130799 TIGR01738, bioH, pimelyl-[acyl-carrier protein] methyl ester esterase | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 6e-13
Identities = 52/273 (19%), Positives = 90/273 (32%), Gaps = 52/273 (19%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
LVLIHG G NA + + + +F +++ DL G S P
Sbjct: 2 QGNVHLVLIHGWGMNA-EVFRCLDEELSAHFTLHLVDLPGHGRSRGFGP-----LSLADA 55
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
+ A + +G S GG V +AA +++ +V S C ++ K
Sbjct: 56 AEAIAAQAPDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPD 115
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA 226
L + L ++ + + + T R+ RA
Sbjct: 116 VLTGFQQQLSDDYQRTIERFLA--------------------LQTLGTPT---ARQDARA 152
Query: 227 IPKD---RKISN-------------------IDKITQPTLILWGEHDQIFPLELGRRLKS 264
+ + R N + I+ P L L+G D + P ++ L
Sbjct: 153 LKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYL-D 211
Query: 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSF 297
L +++L + KA HA + F L +F
Sbjct: 212 KLAPHSELYIFAKAAHAPFLSHAEAFCALLVAF 244
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (Pfam model pfam00561). Members of this family are restricted to the Proteobacteria [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 245 |
| >gnl|CDD|131480 TIGR02427, protocat_pcaD, 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 1e-12
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 38/265 (14%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
D P LV I+ LG + L W ++P + F V D G S S A+ V
Sbjct: 11 DGAPVLVFINSLGTD-LRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDV 69
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-RDRMFKV 165
+ +++ +++ GLS GG + +AA+ +++ +V+ + + + R+ V
Sbjct: 70 LALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAV 129
Query: 166 -----SDLEEASKILVPQSPG------KLKELMRYTFFKRPPLSLVPSCLLSDYI-DAMC 213
+ L +A + +PG +L R ++PP C I DA
Sbjct: 130 RAEGLAALADAV-LERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCC---AAIRDADF 185
Query: 214 TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273
+ L I PTL + G+ D P EL R + + A+
Sbjct: 186 RDRLGA-------------------IAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFA 225
Query: 274 VIKKAGHAFNYEKPKEFYKHLKSFL 298
I+ AGH E+P+ F L+ FL
Sbjct: 226 EIRGAGHIPCVEQPEAFNAALRDFL 250
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate [Energy metabolism, Other]. Length = 251 |
| >gnl|CDD|215315 PLN02578, PLN02578, hydrolase | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-10
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 35/273 (12%)
Query: 52 LVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME 111
+VLIHG GA+A + W IP + + VY DLL FG S E + V ++
Sbjct: 89 IVLIHGFGASA-FHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVK 147
Query: 112 AHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEE- 170
+ LVG S GGF S A + E + V + S + + +EE
Sbjct: 148 EVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG--QFGSESREKEEAIVVEET 205
Query: 171 -ASKILVPQSPGKLKELMR-----YTFFKRPPLSLVPSCLLSDYIDAM-CTEYLEEK--- 220
++ +V LKE + + F++ S + S L S Y D +YL E
Sbjct: 206 VLTRFVV----KPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITE 261
Query: 221 ------------RELVRAIPKDRKI---SNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265
R + R + + S + K++ P L+LWG+ D ++K+
Sbjct: 262 PAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKA- 320
Query: 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ L+ + +AGH + E P++ K L +L
Sbjct: 321 FYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWL 352
|
Length = 354 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 3e-09
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281
++ A + ++ K+T P LI+ G D + P E L + L A+L+VI+ AGH+
Sbjct: 87 VLAAGDPPDALDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALPGPAELVVIEGAGHS 145
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|184875 PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 58/267 (21%), Positives = 100/267 (37%), Gaps = 52/267 (19%)
Query: 52 LVLIHGLGANALWQWTNIIPHMIHYFN---------VYVPDLLFFGDSFTTRPERSESFQ 102
+VLIHG G + L W FN V DL G S S
Sbjct: 134 VVLIHGFGGD-LNNWL---------FNHAALAAGRPVIALDLPGHGASSKAVGAGSLDEL 183
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162
A V+ ++A +++ LVG S GG V +AA+ +++ + + E +
Sbjct: 184 AAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN---GD 240
Query: 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY--LEEK 220
+ + A +S +LK ++ F P+ + ++ + +Y L+
Sbjct: 241 Y-IDGFVAA------ESRRELKPVLELLFAD-------PALVTRQMVEDL-LKYKRLDGV 285
Query: 221 RELVRAI-----PKDRK----ISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
+ +RA+ R+ + + P L++WGE D+I P L D
Sbjct: 286 DDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIP----AAHAQGLPDGVA 341
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ V+ AGH E + + L FL
Sbjct: 342 VHVLPGAGHMPQMEAAADVNRLLAEFL 368
|
Length = 371 |
| >gnl|CDD|132386 TIGR03343, biphenyl_bphD, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 1e-08
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 52 LVLIHGLGANAL-WQ--WTNIIPHMIHYFNVYVPDLLFFG--DSFTTRPERSESFQAECV 106
++++HG G A W + NI P + + V + D F D+ +R A V
Sbjct: 33 VIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARAV 91
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
+M+A ++K LVG S GG + A ++ ++I K+++ G L +F
Sbjct: 92 KGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG------GLGPSLFAPM 145
Query: 167 DLEEAS---KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
+E K+ S LK+++ F + SL+ LL + + + K L
Sbjct: 146 PMEGIKLLFKLYAEPSYETLKQMLNVFLFDQ---SLITEELLQGRWENIQRQPEHLKNFL 202
Query: 224 VRAIPKDRKISNID------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK 277
+ + + +S D +I TL+ WG D+ PL+ G +L ++ +AQL V +
Sbjct: 203 ISS--QKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSR 259
Query: 278 AGHAFNYEKPKEFYKHLKSFL 298
GH +E F + + FL
Sbjct: 260 CGHWAQWEHADAFNRLVIDFL 280
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. Length = 282 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 55/303 (18%), Positives = 103/303 (33%), Gaps = 54/303 (17%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSF 91
DG+ + K +VL+HGLG ++ ++ + + F+VY DL G S
Sbjct: 18 DGTRLRYRTWAAPEPPKGVVVLVHGLGEHS-GRYEELADDLAARGFDVYALDLRGHGRS- 75
Query: 92 TTRPER--SESFQAECVMRVMEA--------HSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
R +R +SF + ++A + L+G S GG + A++ +I
Sbjct: 76 -PRGQRGHVDSFAD--YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRI 132
Query: 142 EKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201
+ +V+ + + + + ++
Sbjct: 133 DGLVLSSP------------ALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLT 180
Query: 202 SCLLSD--YIDAMCTEYLEEKRELVRAIP------------KDRKISNIDKITQPTLILW 247
L D + A E + P + + + I P L+L
Sbjct: 181 DDLSRDPAEVAAY-----EADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQ 235
Query: 248 GEHDQIFP-LELGRRLKSHLG-DNAQLIVIKKAGHA-FNYEKP---KEFYKHLKSFLLDS 301
G D++ +E R G + +L VI A H N E +E K + ++L ++
Sbjct: 236 GGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLN-EPDRAREEVLKDILAWLAEA 294
Query: 302 QPS 304
PS
Sbjct: 295 LPS 297
|
Length = 298 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 5e-08
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 48 SKPDLVLIHG-LGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
+KP LV +HG LG+ A WQ +I + +F DL G S + F+
Sbjct: 1 AKPVLVFLHGFLGSGADWQ--ALIELLGPHFRCLAIDLPGHGSSQSPSDIERYDFEEIAQ 58
Query: 107 M---RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146
+ +++ ++ LVG S GG + A Q+ E+++ +++
Sbjct: 59 LLLATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLIL 101
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 5e-07
Identities = 52/294 (17%), Positives = 86/294 (29%), Gaps = 76/294 (25%)
Query: 33 DGSVMHCWVPKTRNDSK----PDLVLIHG--LGANALWQWTNIIPHMIHYFNVYVPDL-- 84
DG +H W+ K P +V IHG I + V P+
Sbjct: 374 DGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRG 433
Query: 85 -LFFGDSFTTRPERS----ESFQAECVMRVMEAHSV---KKLSLVGLSYGGFVGYSMAAQ 136
+G F + + + + +++ + G SYGG++ +AA
Sbjct: 434 STGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTL-LAAT 492
Query: 137 FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196
+ + V GV + + Y
Sbjct: 493 KTPRFKAAVAVAGGV---------------------------------DWLLYFGESTEG 519
Query: 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256
L + E++ + P I D I P L++ GE D P+
Sbjct: 520 LR--------FDPEENGGGPPEDREKYEDRSP----IFYADNIKTPLLLIHGEEDDRVPI 567
Query: 257 E----LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE---------FYKHLKSF 297
E L LK G +L+V GH F+ + + F +HLK
Sbjct: 568 EQAEQLVDALKRK-GKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQR 620
|
Length = 620 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 25/117 (21%), Positives = 39/117 (33%), Gaps = 14/117 (11%)
Query: 52 LVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110
+VL+HG G + + + + +NV D G S V+
Sbjct: 2 VVLLHGAGGDP-EAYAPLARALASRGYNVVAVDYPGHGASLGAPDAE----------AVL 50
Query: 111 EAH--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
+++ LVG S GG V +AA+ VV+ DL V
Sbjct: 51 ADAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLTVPV 107
|
This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|215484 PLN02894, PLN02894, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 46/285 (16%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS----FTTRP-ERSESF 101
+ P LV++HG GA+ + + N + F V D L +G S FT + E +E++
Sbjct: 103 EDAPTLVMVHGYGASQGFFFRNF-DALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAW 161
Query: 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS-GVCLEEQDLRD 160
+ +A ++ L+G S+GG+V A + E ++ +++ G E D +
Sbjct: 162 FIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSE 221
Query: 161 RMFK---------VSDLEEAS----KI---LVPQSPGKLKELMRYT------FFKRPPLS 198
+ K ++ L E++ KI L P P ++ RYT LS
Sbjct: 222 WLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVR---RYTTARFGAHSTGDILS 278
Query: 199 LVPSCLLSDYI---------DAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249
S LL+DY+ +C +Y+ R P S K+ PT ++G
Sbjct: 279 EEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARK-PLLESASEW-KV--PTTFIYGR 334
Query: 250 HDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHL 294
HD + E + + ++I + + GH + P F+ +
Sbjct: 335 HDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAV 378
|
Length = 402 |
| >gnl|CDD|211851 TIGR03611, RutD, pyrimidine utilization protein D | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 35/255 (13%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-SESFQAECVMR 108
P +VL GLG + + W + + F+V D G S P S + A+ V++
Sbjct: 13 PVVVLSSGLGGSGSY-WAPQLAVLTQRFHVVTYDHRGTGRSPGELPPDYSIAHMADDVLQ 71
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL 168
+++A +++ VG + GG +G +A + E++ +V+ + R F V
Sbjct: 72 LLDALGIERFHFVGHALGGLIGLQLALDYPERLTSLVLINGWSRPDPHTRR--CFDVR-- 127
Query: 169 EEASKILVPQSPGKLKELMRYT----FFKRPPLSLVPSCLLSDYI------DAMCTEYLE 218
L+ + + PL L P+ +S+ +A +
Sbjct: 128 ---------------IALLYHAGPEAYVHAQPLFLYPADWISENAPRLAADEAHALAHFP 172
Query: 219 EKRELVRAIPKDRKI---SNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI 275
K ++R I + +D+I P L++ D + P RL + L NAQL ++
Sbjct: 173 GKNNVLRRINALEAFDVSARLDRIRHPVLLIAARDDMLVPYTCSLRLAAAL-PNAQLKLL 231
Query: 276 KKAGHAFNYEKPKEF 290
GHA N P+ F
Sbjct: 232 PYGGHASNVTDPETF 246
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. Length = 248 |
| >gnl|CDD|188121 TIGR01250, pro_imino_pep_2, proline-specific peptidase, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 229 KDRKISN-IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP 287
KD I++ + +I PTL+ GE D + E R + L ++L+V H E P
Sbjct: 220 KDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREM-QELIAGSRLVVFPDGSHMTMIEDP 277
Query: 288 KEFYKHLKSFLL 299
+ ++K L F+
Sbjct: 278 EVYFKLLSDFIR 289
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase. Length = 289 |
| >gnl|CDD|132100 TIGR03056, bchO_mg_che_rel, putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 5e-05
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Query: 38 HCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER 97
H V + P L+L+HG GA+ W +++P + F V PDL G FT P R
Sbjct: 17 HWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLARSFRVVAPDLP--GHGFTRAPFR 73
Query: 98 ---SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMA 134
+ AE + + A + ++G S G + +A
Sbjct: 74 FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLA 113
|
Members of this family belong to the alpha/beta fold family hydrolases (pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity [Energy metabolism, Photosynthesis]. Length = 278 |
| >gnl|CDD|224561 COG1647, COG1647, Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 33/174 (18%)
Query: 119 SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK--VSDLEEASKILV 176
++VGLS GG +A + K K+V C+ V + + + A K
Sbjct: 88 AVVGLSMGGVFALKLAYHYPPK--KIVPMCAPV---NVKSWRIIIEGLLEYFRNAKKYEG 142
Query: 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI 236
KE+ Y D + ++L++ ++
Sbjct: 143 KDQEQIDKEMKSYK----------------DTPMTT----TAQLKKLIKDA-----RRSL 177
Query: 237 DKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA-QLIVIKKAGHAFNYEKPKE 289
DKI PTL++ G D++ P E + H+ + +L ++ +GH +K ++
Sbjct: 178 DKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERD 231
|
Length = 243 |
| >gnl|CDD|234315 TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 9e-05
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ P L L GE D+ F +++ + ++ + N L++I AGH + E P+ F K L +FL
Sbjct: 194 LKIPVLYLCGEKDEKF-VQIAKEMQKLI-PNLTLVIIANAGHNIHLENPEAFAKILLAFL 251
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 252 |
| >gnl|CDD|216672 pfam01738, DLH, Dienelactone hydrolase family | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 230 DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAF 282
+ + I P L +GE D P E L+ L + +L V AGHAF
Sbjct: 133 EPPLDEAPAIKAPILAHFGEEDPFVPAEARDLLEEALRAANVDHELHVYPGAGHAF 188
|
Length = 215 |
| >gnl|CDD|224932 COG2021, MET2, Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA-GH-AFNYEKPKEFYKHLK 295
+I P L++ D +FP EL R L L L I GH AF E + ++
Sbjct: 304 RIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVES-EAVGPLIR 362
Query: 296 SFL 298
FL
Sbjct: 363 KFL 365
|
Length = 368 |
| >gnl|CDD|137836 PRK10349, PRK10349, carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 6e-04
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 43 KTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102
+T+ LVL+HG G NA W I + +F +++ DL FG RS F
Sbjct: 7 QTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFG--------RSRGFG 57
Query: 103 AECVMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD 157
A + + EA + K +G S GG V +A E+++ +V S C +D
Sbjct: 58 ALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARD 115
|
Length = 256 |
| >gnl|CDD|178419 PLN02824, PLN02824, hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 71/284 (25%), Positives = 93/284 (32%), Gaps = 73/284 (25%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFG------------DSFTTR 94
S P LVL+HG G NA W P + VY DLL +G +SF T
Sbjct: 27 TSGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85
Query: 95 PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE 154
E C V + ++ S GG VG A E GV L
Sbjct: 86 ETWGEQLNDFCSDVVGD-----PAFVICNSVGGVVGLQAAVDAPEL-------VRGVMLI 133
Query: 155 EQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT-----FFKRPPLS-LVPSCLLSDY 208
L R + + + + L+R T FFK V + L Y
Sbjct: 134 NISL--RGLHIKKQPWLGRPFI----KAFQNLLRETAVGKAFFKSVATPETVKNILCQCY 187
Query: 209 ID-AMCTEYLEEKRELVRAI------------------------PKDRKISNIDKITQPT 243
D + T+ ELV AI P++ + + P
Sbjct: 188 HDDSAVTD------ELVEAILRPGLEPGAVDVFLDFISYSGGPLPEEL----LPAVKCPV 237
Query: 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP 287
LI WGE D P+ELGR + IV+ GH E P
Sbjct: 238 LIAWGEKDPWEPVELGRAYAN-FDAVEDFIVLPGVGHCPQDEAP 280
|
Length = 294 |
| >gnl|CDD|179147 PRK00870, PRK00870, haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 28 VTDLQDGSV-MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYF-----NVYV 81
V D G + MH +V + D P ++L+HG + W+ + MI V
Sbjct: 26 VDDGDGGPLRMH-YVDEGPADGPP-VLLLHGEPS-----WSYLYRKMIPILAAAGHRVIA 78
Query: 82 PDLLFFG--DSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139
PDL+ FG D T R + + + E + E + ++LV +GG +G +AA+ +
Sbjct: 79 PDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPD 138
Query: 140 KIEKVVI 146
+ ++V+
Sbjct: 139 RFARLVV 145
|
Length = 302 |
| >gnl|CDD|215530 PLN02980, PLN02980, 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.003
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 93 TRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152
T P S A+ + +++E + K++LVG S G + MA +F +KIE VI
Sbjct: 1422 TEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPG 1481
Query: 153 LEEQDLRDRMFKVSDLEEASKILVPQS---------PGKL-KELMRYTFFKRPPLSLVPS 202
L+++ R D +++L+ G+L K L + F +V S
Sbjct: 1482 LKDEVARKIRSAKDD--SRARMLIDHGLEIFLENWYSGELWKSLRNHPHFN----KIVAS 1535
Query: 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKIS---NIDKITQPTLILWGEHDQIFPLELG 259
LL + ++ +L+ + R+ S ++ + P L++ GE D F ++
Sbjct: 1536 RLLHKDVPSLA--------KLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIA 1586
Query: 260 RRLKSHLGDNA-----------QLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLP 307
+++ +G + +++ I GHA + E P + L+ FL S P
Sbjct: 1587 QKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSSTP 1645
|
Length = 1655 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 315 | |||
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 100.0 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 100.0 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 100.0 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 100.0 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 100.0 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 100.0 | |
| PLN02578 | 354 | hydrolase | 100.0 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 100.0 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 100.0 | |
| PLN02965 | 255 | Probable pheophorbidase | 100.0 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 100.0 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 100.0 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 100.0 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 100.0 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 100.0 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 100.0 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 100.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 100.0 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 100.0 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 100.0 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 100.0 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 100.0 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 100.0 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.98 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.98 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.98 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.97 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.97 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.97 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.97 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.97 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.97 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.97 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.97 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.97 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.96 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.96 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.96 | |
| PLN02511 | 388 | hydrolase | 99.95 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.95 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.95 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.94 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.93 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.92 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.92 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.91 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.91 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.91 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.9 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.89 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.89 | |
| PRK10566 | 249 | esterase; Provisional | 99.89 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.88 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.87 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.87 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.85 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.84 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.84 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.84 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.8 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.79 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.79 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.78 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.75 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.74 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.71 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.7 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.7 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.69 | |
| PLN00021 | 313 | chlorophyllase | 99.68 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 99.67 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.67 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.67 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 99.66 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.64 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.64 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.63 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.61 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.59 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.58 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.56 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.55 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.54 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.52 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.5 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.5 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.49 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.49 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.46 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.44 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.43 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 99.41 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.4 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.36 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 99.35 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.34 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.34 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.32 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.29 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 99.27 | |
| PRK10115 | 686 | protease 2; Provisional | 99.24 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.19 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.19 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.18 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 99.16 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.16 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.14 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.12 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.11 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.07 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.06 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.06 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.05 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.02 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.0 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 98.95 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.92 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.9 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.88 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 98.88 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.88 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.85 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 98.85 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.84 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 98.83 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 98.82 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 98.82 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.74 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.73 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 98.69 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 98.65 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.64 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 98.63 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 98.63 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.59 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.56 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.55 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.52 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.5 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.4 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.36 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 98.36 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 98.32 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 98.28 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.27 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.19 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 98.19 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 98.19 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 98.18 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.17 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 98.14 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.1 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 98.1 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.09 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 98.09 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 98.07 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 98.05 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.05 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 98.02 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 97.96 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.94 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.93 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 97.9 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.77 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 97.72 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 97.69 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 97.58 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.53 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.46 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.41 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 97.33 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.31 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 97.24 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.23 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.23 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.22 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.19 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.05 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 97.01 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.98 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.9 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.66 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 96.64 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 96.63 | |
| PLN02209 | 437 | serine carboxypeptidase | 96.6 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 96.58 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.56 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 96.47 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.47 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 96.42 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 96.32 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 96.2 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 95.93 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 95.83 | |
| PLN02162 | 475 | triacylglycerol lipase | 95.78 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 95.74 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.69 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.61 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 95.59 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.49 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.4 | |
| PLN02408 | 365 | phospholipase A1 | 95.29 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 95.27 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 95.2 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.14 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 95.01 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.6 | |
| PLN02324 | 415 | triacylglycerol lipase | 94.57 | |
| PLN02310 | 405 | triacylglycerol lipase | 94.44 | |
| PLN02802 | 509 | triacylglycerol lipase | 94.22 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.18 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 94.08 | |
| PLN02753 | 531 | triacylglycerol lipase | 94.02 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 93.86 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 93.7 | |
| PLN02719 | 518 | triacylglycerol lipase | 93.65 | |
| PLN02761 | 527 | lipase class 3 family protein | 93.55 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 93.52 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 93.42 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 93.37 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 93.23 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 92.99 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 92.79 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 92.66 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 92.58 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 92.58 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 92.13 | |
| PLN02209 | 437 | serine carboxypeptidase | 91.74 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 91.21 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 90.31 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 90.05 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 89.57 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 88.88 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 88.83 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 88.83 | |
| PF09949 | 100 | DUF2183: Uncharacterized conserved protein (DUF218 | 87.83 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 87.81 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 87.66 | |
| KOG2385 | 633 | consensus Uncharacterized conserved protein [Funct | 85.31 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 83.28 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 82.64 |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=263.72 Aligned_cols=263 Identities=21% Similarity=0.262 Sum_probs=171.8
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-------CCCCc
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-------PERSE 99 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-------~~~~~ 99 (315)
.+.++ +|..++|... ++ ++++||||||+++++. .|..+++.|++.|+|+++|+||||.|..+. ..++.
T Consensus 11 ~~~~~-~~~~i~y~~~--G~-~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 11 RTWRW-KGYNIRYQRA--GT-SGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred ceEEE-cCeEEEEEEc--CC-CCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 35555 5777888764 22 3579999999999986 699999999999999999999999997543 23566
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-h---hhhhhhhcccchhhhh---
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-Q---DLRDRMFKVSDLEEAS--- 172 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~---~~~~~~~~~~~~~~~~--- 172 (315)
..+++++.+++++++.++++|+||||||++++.+|.++|++|+++|++++...... . ........ .+....
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 163 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIK--AFQNLLRET 163 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHH--HHHHHHhch
Confidence 67899999999999999999999999999999999999999999999986542110 0 00000000 000000
Q ss_pred ---hhcc--CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 173 ---KILV--PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 173 ---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
..+. ......+...+...+..... ........+..... .........+............++++++|+|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 240 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDDSA---VTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIA 240 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccChhh---ccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEE
Confidence 0000 00011111121111111100 11111111100000 000001111111111111224577899999999
Q ss_pred EeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 247 WGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|++|+++|.+.++.+.+.+ +++++++++++||++++|+|++|++.|.+|+++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 241 WGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred EecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 99999999999999988876 678999999999999999999999999999975
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=258.23 Aligned_cols=263 Identities=21% Similarity=0.258 Sum_probs=172.5
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+++.+ +|.+++|+.... +.++++|||+||+++++. .|..+++.|.+.|+|+++|+||||.|..+...++...+++++
T Consensus 5 ~~~~~-~~~~~~~~~~~~-~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 81 (276)
T TIGR02240 5 RTIDL-DGQSIRTAVRPG-KEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLA 81 (276)
T ss_pred EEecc-CCcEEEEEEecC-CCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHH
Confidence 34555 577899987432 233579999999999886 699999999999999999999999997554445667789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
.++++++++++++|+||||||++|+.+|.++|++|+++|+++++..... .................... ........
T Consensus 82 ~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 159 (276)
T TIGR02240 82 ARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS--HGIHIAPD 159 (276)
T ss_pred HHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc--cccchhhh
Confidence 9999999999999999999999999999999999999999987653211 00000000000000000000 00000000
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHH-HHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY-LEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
.+...+... +. ....+........ ........... .......++++++|+|+|+|++|+++|++.++.+.+
T Consensus 160 ~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 160 IYGGAFRRD------PE-LAMAHASKVRSGGKLGYYWQLFAGL-GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred hccceeecc------ch-hhhhhhhhcccCCCchHHHHHHHHc-CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 000000000 00 0000000000000 00000000111 111224467899999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
.+ ++++++++++ ||+++.|+|+++++.|.+|+++....
T Consensus 232 ~~-~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 232 RI-PNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred hC-CCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 98 6899999975 99999999999999999999876553
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=258.52 Aligned_cols=266 Identities=23% Similarity=0.310 Sum_probs=167.0
Q ss_pred eecCCCceEEEEEecCCCC----CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHH
Q 021229 29 TDLQDGSVMHCWVPKTRND----SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQA 103 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~----~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a 103 (315)
+..++..+++|.... ++ .+|+||||||++.+.. .|.++++.|.+.|+|+++|+||||.|+.+. ..++...++
T Consensus 66 ~~~~g~~~i~Y~~~G--~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a 142 (360)
T PLN02679 66 WKWKGEYSINYLVKG--SPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWA 142 (360)
T ss_pred EEECCceeEEEEEec--CcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHH
Confidence 444433378887652 22 3589999999999885 699999999989999999999999997543 345666778
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHh-hhhhhceeEEeeCCCccCchhhhhh-hhc--ccchh---h------
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ-FKEKIEKVVICCSGVCLEEQDLRDR-MFK--VSDLE---E------ 170 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~-~~~--~~~~~---~------ 170 (315)
+++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++............ ... ..... .
T Consensus 143 ~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (360)
T PLN02679 143 ELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRG 222 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchh
Confidence 999999999999999999999999999999874 7999999999986542211100000 000 00000 0
Q ss_pred hh-hhccC-CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCccccccccccCCCCeEEEE
Q 021229 171 AS-KILVP-QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDRKISNIDKITQPTLILW 247 (315)
Q Consensus 171 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 247 (315)
.. ..+.. .....+...+...+... . ...+.....+...... ................+....+.++++|||+|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~ 299 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYGNK-E--AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLW 299 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhccCc-c--cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEE
Confidence 00 00000 00011111111111111 0 0111111111000000 001111111111111122345678999999999
Q ss_pred eCCCCCCchHH-----HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 248 GEHDQIFPLEL-----GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 248 G~~D~~~~~~~-----~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|++|.++|++. .+.+.+.+ +++++++++++||++++|+|++|++.|.+||.+.
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 99999998763 23456666 6899999999999999999999999999999753
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=254.93 Aligned_cols=265 Identities=17% Similarity=0.217 Sum_probs=167.5
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
++..++++ +|..++|... +++++||||||++++.. .|..+++.|.+.|+|+++|+||||.|+.+...++...++
T Consensus 7 ~~~~~~~~-~g~~i~y~~~----G~g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a 80 (295)
T PRK03592 7 GEMRRVEV-LGSRMAYIET----GEGDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHA 80 (295)
T ss_pred CcceEEEE-CCEEEEEEEe----CCCCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHH
Confidence 34445666 6778888764 24579999999998885 699999999999999999999999998665556777789
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hhhhhhhhcccchhhhhhhccCC-Cch
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QDLRDRMFKVSDLEEASKILVPQ-SPG 181 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (315)
+++.+++++++.++++|+||||||.+|+.++.++|++|+++|++++...... ........... .. ...+. ...
T Consensus 81 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~ 155 (295)
T PRK03592 81 RYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELF---QA--LRSPGEGEE 155 (295)
T ss_pred HHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHH---HH--HhCcccccc
Confidence 9999999999999999999999999999999999999999999986332111 00000000000 00 00000 000
Q ss_pred HH---HHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCc-----------cccccccccCCCCeEEE
Q 021229 182 KL---KELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPK-----------DRKISNIDKITQPTLIL 246 (315)
Q Consensus 182 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P~lvi 246 (315)
.. ...... +..........+.....+...... ............+.. .+....+.++++|+|+|
T Consensus 156 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 234 (295)
T PRK03592 156 MVLEENVFIER-VLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLI 234 (295)
T ss_pred cccchhhHHhh-cccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEE
Confidence 00 000000 000000000000000001000000 000000000000000 00123457789999999
Q ss_pred EeCCCCCCchHHH-HHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 247 WGEHDQIFPLELG-RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 247 ~G~~D~~~~~~~~-~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+|++|.++++... +.+.+.+ +++++++++++||++++|+|+++++.|.+|+++.
T Consensus 235 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 235 NAEPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred eccCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 9999999954444 4444555 6899999999999999999999999999999854
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=242.04 Aligned_cols=239 Identities=20% Similarity=0.225 Sum_probs=148.2
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFV 129 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~i 129 (315)
|+||||||+++++. .|..+++.|.+.|+|+++|+||||.|.... ..+....+ +.+.+++.++++|+||||||.+
T Consensus 14 ~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~----~~l~~~~~~~~~lvGhS~Gg~i 87 (256)
T PRK10349 14 VHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMA----EAVLQQAPDKAIWLGWSLGGLV 87 (256)
T ss_pred CeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHH----HHHHhcCCCCeEEEEECHHHHH
Confidence 46999999999886 699999999999999999999999996432 22333233 3334567899999999999999
Q ss_pred HHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHH
Q 021229 130 GYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYI 209 (315)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (315)
|+.+|.++|++|+++|++++.+............. .........+..........++......... ... ....+.
T Consensus 88 a~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~ 162 (256)
T PRK10349 88 ASQIALTHPERVQALVTVASSPCFSARDEWPGIKP-DVLAGFQQQLSDDFQRTVERFLALQTMGTET---ARQ-DARALK 162 (256)
T ss_pred HHHHHHhChHhhheEEEecCccceecCCCCCcccH-HHHHHHHHHHHhchHHHHHHHHHHHHccCch---HHH-HHHHHH
Confidence 99999999999999999976543211100000000 0000000000000000111111110001000 000 000000
Q ss_pred HHHHHHH---HHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCC
Q 021229 210 DAMCTEY---LEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEK 286 (315)
Q Consensus 210 ~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~ 286 (315)
....... ..........+...+....+.++++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||++++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~ 241 (256)
T PRK10349 163 KTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISH 241 (256)
T ss_pred HHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccC
Confidence 0000000 00000000111111233457789999999999999999999999999988 7999999999999999999
Q ss_pred hHHHHHHHHHHHhc
Q 021229 287 PKEFYKHLKSFLLD 300 (315)
Q Consensus 287 p~~~~~~i~~fl~~ 300 (315)
|++|++.|.+|-++
T Consensus 242 p~~f~~~l~~~~~~ 255 (256)
T PRK10349 242 PAEFCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998654
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=246.38 Aligned_cols=257 Identities=19% Similarity=0.286 Sum_probs=163.1
Q ss_pred eeeecCC--C--ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC--CCCCc
Q 021229 27 SVTDLQD--G--SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR--PERSE 99 (315)
Q Consensus 27 ~~~~~~~--g--~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~--~~~~~ 99 (315)
+++.+++ | .+++|... +++++++||||||++.+.. .|..+++.|.+ +|+|+++|+||||.|+.+. ..++.
T Consensus 22 ~~~~~~~~~~~~~~i~y~~~--G~~~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 22 HYVDVDDGDGGPLRMHYVDE--GPADGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred eeEeecCCCCceEEEEEEec--CCCCCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 4555643 2 46777764 3335679999999998886 69999999975 5999999999999997542 23566
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
..+++++.++++++++++++|+||||||.+|+.+|.++|++|+++|+++++.............. ... +....
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~-~~~~~ 171 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWA------WRA-FSQYS 171 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhh------hhc-ccccC
Confidence 67799999999999999999999999999999999999999999999976532211000000000 000 00000
Q ss_pred ch-HHHHHHHhhhccCCCCCCCCcchhHHHHHHH----HHHHHHHHHHhhhccC-------ccccccccccCCCCeEEEE
Q 021229 180 PG-KLKELMRYTFFKRPPLSLVPSCLLSDYIDAM----CTEYLEEKRELVRAIP-------KDRKISNIDKITQPTLILW 247 (315)
Q Consensus 180 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~P~lvi~ 247 (315)
+. .....+...... .........+.... ..........+..... .......+.++++|+++|+
T Consensus 172 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 246 (302)
T PRK00870 172 PVLPVGRLVNGGTVR-----DLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAF 246 (302)
T ss_pred chhhHHHHhhccccc-----cCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEe
Confidence 00 000000000000 00000000000000 0000000000000000 0001234678999999999
Q ss_pred eCCCCCCchHHHHHHHhhcCCCcE---EEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 248 GEHDQIFPLELGRRLKSHLGDNAQ---LIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 248 G~~D~~~~~~~~~~l~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|++|+++|... +.+.+.+ ++++ +++++++||++++|+|++|++.|.+|+++
T Consensus 247 G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 247 SDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred cCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 99999999866 8888888 5665 88999999999999999999999999975
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=248.61 Aligned_cols=257 Identities=25% Similarity=0.364 Sum_probs=167.5
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA 112 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~ 112 (315)
+|..++|... +++++||||||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++...+++++.+++++
T Consensus 74 ~~~~i~Y~~~----g~g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 74 RGHKIHYVVQ----GEGLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCEEEEEEEc----CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 4667888763 24578999999999875 699999999989999999999999998665556666678899999999
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh-hh-------hhc---ccchhhhhhh-------
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR-DR-------MFK---VSDLEEASKI------- 174 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~-------~~~---~~~~~~~~~~------- 174 (315)
++.++++++||||||.+++.+|.++|++|+++|++++.......... .. ... ..........
T Consensus 149 ~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (354)
T PLN02578 149 VVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLF 228 (354)
T ss_pred hccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999765432211000 00 000 0000000000
Q ss_pred ccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHHhhhcc----CccccccccccCCCCeEEEEeC
Q 021229 175 LVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRELVRAI----PKDRKISNIDKITQPTLILWGE 249 (315)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~l~~i~~P~lvi~G~ 249 (315)
.....+..........+ .+.. ...+.....+..... ..........+... ......+.+.++++|+++|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~ 305 (354)
T PLN02578 229 WQAKQPSRIESVLKSVY-KDKS--NVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGD 305 (354)
T ss_pred HHhcCHHHHHHHHHHhc-CCcc--cCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeC
Confidence 00001111111111111 1100 011111111100000 00000111111111 1111234567899999999999
Q ss_pred CCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 250 HDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+|.++|.+.++.+++.+ ++++++++ ++||+++.|+|++|++.|.+|++
T Consensus 306 ~D~~v~~~~~~~l~~~~-p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 306 LDPWVGPAKAEKIKAFY-PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCHHHHHHHHHhC-CCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999988 68999999 69999999999999999999986
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=236.73 Aligned_cols=275 Identities=21% Similarity=0.322 Sum_probs=175.2
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCC--CCCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTR--PERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~--~~~~~ 99 (315)
+..-++++.+ |..+|+... +.+++|.|+|+||+..+.. .|+.+++.|+.. |+|+++|+||+|.|+.+. ..++.
T Consensus 21 ~~~hk~~~~~-gI~~h~~e~--g~~~gP~illlHGfPe~wy-swr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 21 AISHKFVTYK-GIRLHYVEG--GPGDGPIVLLLHGFPESWY-SWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred hcceeeEEEc-cEEEEEEee--cCCCCCEEEEEccCCccch-hhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 3444567774 677777765 5667899999999998774 799999999988 999999999999998764 45677
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhh-hhhhccCC
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEE-ASKILVPQ 178 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 178 (315)
..++.++..++++++.++++++||+||++||+.+|..+|++|+++|.++.+...+.....+.......... ....-.+.
T Consensus 97 ~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~ 176 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPG 176 (322)
T ss_pred HHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccC
Confidence 77899999999999999999999999999999999999999999999876554211110000000000000 00000000
Q ss_pred Cch-----HHHHHHHhhhccC--CCCCCCC-------cchhHHHHHHHHH----HHHHHHHHhhhccCccc--ccccccc
Q 021229 179 SPG-----KLKELMRYTFFKR--PPLSLVP-------SCLLSDYIDAMCT----EYLEEKRELVRAIPKDR--KISNIDK 238 (315)
Q Consensus 179 ~~~-----~~~~~~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~l~~ 238 (315)
..+ ...+.+...+... +.....+ .++..+-++.... .......+.++.+.... ....+.+
T Consensus 177 ~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~ 256 (322)
T KOG4178|consen 177 KPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAK 256 (322)
T ss_pred cchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccc
Confidence 000 0011111122111 0000011 1111111111111 11111111222221111 1334568
Q ss_pred CCCCeEEEEeCCCCCCchH-HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 239 ITQPTLILWGEHDQIFPLE-LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~-~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++|+++|+|+.|.+.+.. .++.+.+.++...+.++++++||+++.|+|++++++|.+|+++.
T Consensus 257 i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 257 ITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 9999999999999999866 45566666633347899999999999999999999999999853
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=251.11 Aligned_cols=264 Identities=16% Similarity=0.203 Sum_probs=158.5
Q ss_pred CCceEEEEEecCCCCC-------CCcEEEEccCCCChhhhHH--hhHhhc--------cccceEEeecCCCCCCCCCCCC
Q 021229 33 DGSVMHCWVPKTRNDS-------KPDLVLIHGLGANALWQWT--NIIPHM--------IHYFNVYVPDLLFFGDSFTTRP 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~-------~~~vvllHG~~~~~~~~w~--~~~~~l--------~~~~~vi~~D~~G~G~S~~~~~ 95 (315)
+|..++|.... +++ +|+||||||++++.. .|. .+.+.+ .++|+||++|+||||.|+.+..
T Consensus 48 ~g~~i~y~~~G--~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~ 124 (360)
T PRK06489 48 PELRLHYTTLG--TPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD 124 (360)
T ss_pred CCceEEEEecC--CCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc
Confidence 46778887752 323 679999999998764 454 333333 6779999999999999975422
Q ss_pred -------CCCchhHHHHHHHH-HHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hhh-hhhhhc
Q 021229 96 -------ERSESFQAECVMRV-MEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QDL-RDRMFK 164 (315)
Q Consensus 96 -------~~~~~~~a~~~~~~-l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~~-~~~~~~ 164 (315)
.++...+++++.++ ++++++++++ |+||||||++|+.+|.++|++|+++|++++...... ... .....
T Consensus 125 ~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~- 203 (360)
T PRK06489 125 GLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRML- 203 (360)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHH-
Confidence 24555667777775 4889999986 899999999999999999999999999976432111 110 00000
Q ss_pred ccchhhhhhh---ccCCCchHHHHHHHhh--hccCC----CCCCCCcchhHHHHHHHHHHH----HHHHHHhhhccCccc
Q 021229 165 VSDLEEASKI---LVPQSPGKLKELMRYT--FFKRP----PLSLVPSCLLSDYIDAMCTEY----LEEKRELVRAIPKDR 231 (315)
Q Consensus 165 ~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 231 (315)
.......... .....+.......... +.... ............+.+...... ..............+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 283 (360)
T PRK06489 204 IESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYN 283 (360)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccC
Confidence 0000000000 0000011111111000 00000 000000000011111111000 001111111111222
Q ss_pred cccccccCCCCeEEEEeCCCCCCchHHH--HHHHhhcCCCcEEEEEcCC----CCccccCChHHHHHHHHHHHhcCC
Q 021229 232 KISNIDKITQPTLILWGEHDQIFPLELG--RRLKSHLGDNAQLIVIKKA----GHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 232 ~~~~l~~i~~P~lvi~G~~D~~~~~~~~--~~l~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
....+.+|++|+|+|+|++|.++|++.+ +.+++.+ ++++++++++| ||.++ |+|++|++.|.+||++..
T Consensus 284 ~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 284 PSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 3456788999999999999999998875 7888888 78999999996 99997 899999999999998654
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=240.48 Aligned_cols=237 Identities=19% Similarity=0.265 Sum_probs=154.3
Q ss_pred cEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcCC-CceEEEEEchhH
Q 021229 51 DLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHSV-KKLSLVGLSYGG 127 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~~-~~v~lvGhSmGG 127 (315)
+||||||++.+.. .|..+++.| ..+|+|+++|+||||.|..+. ..++...+++++.+++++++. ++++|+||||||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 5999999998875 699999999 556999999999999997443 345667789999999999987 599999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc-ccchhhhhhhc----cCCCch--HHH-HHHHhhhccCCCCCC
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK-VSDLEEASKIL----VPQSPG--KLK-ELMRYTFFKRPPLSL 199 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~--~~~-~~~~~~~~~~~~~~~ 199 (315)
.+++.++.++|++|+++|++++............... ........... ...... ... +.....++....
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 160 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSP--- 160 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCC---
Confidence 9999999999999999999987532111000000000 00000000000 000000 000 011111111100
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhccCcc-ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCC
Q 021229 200 VPSCLLSDYIDAMCTEYLEEKRELVRAIPKD-RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA 278 (315)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~ 278 (315)
..... ... ... ........... .....+.++++|+++|+|++|.++|++.++.+++.+ ++++++++++|
T Consensus 161 -----~~~~~-~~~-~~~--~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~ 230 (255)
T PLN02965 161 -----LEDYT-LSS-KLL--RPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW-PPAQTYVLEDS 230 (255)
T ss_pred -----HHHHH-HHH-Hhc--CCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC-CcceEEEecCC
Confidence 00000 000 000 00000000000 011234578999999999999999999999999999 68999999999
Q ss_pred CCccccCChHHHHHHHHHHHhcC
Q 021229 279 GHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 279 gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
||++++|+|++|++.|.+|+++.
T Consensus 231 GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 231 DHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCchhhcCHHHHHHHHHHHHHHh
Confidence 99999999999999999998753
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=239.16 Aligned_cols=252 Identities=22% Similarity=0.342 Sum_probs=157.1
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHh---hHhhc-cccceEEeecCCCCCCCCCCCCCC-CchhHHHHHHHH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTN---IIPHM-IHYFNVYVPDLLFFGDSFTTRPER-SESFQAECVMRV 109 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~---~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~a~~~~~~ 109 (315)
.+++|... +++++||||||++.+.. .|.. .+..+ .++|+|+++|+||||.|+...... ....+++++.++
T Consensus 20 ~~~~y~~~----g~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 94 (282)
T TIGR03343 20 FRIHYNEA----GNGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGL 94 (282)
T ss_pred eeEEEEec----CCCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHH
Confidence 45676653 24578999999988764 3643 34444 456999999999999997543221 222457889999
Q ss_pred HHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHh
Q 021229 110 MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRY 189 (315)
Q Consensus 110 l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (315)
++.++.++++++||||||++++.+|.++|++|+++|++++....... ... ........................+..
T Consensus 95 l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (282)
T TIGR03343 95 MDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSL--FAP-MPMEGIKLLFKLYAEPSYETLKQMLNV 171 (282)
T ss_pred HHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccc--ccc-CchHHHHHHHHHhcCCCHHHHHHHHhh
Confidence 99999999999999999999999999999999999999754211100 000 000000000000000011111111111
Q ss_pred hhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc-----cCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA-----IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
..+... ................. .......... ....+....++++++|+|+|+|++|.+++++.++.+++
T Consensus 172 ~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~ 247 (282)
T TIGR03343 172 FLFDQS---LITEELLQGRWENIQRQ-PEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLW 247 (282)
T ss_pred CccCcc---cCcHHHHHhHHHHhhcC-HHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHH
Confidence 111110 01111111110000000 0000011110 11111233567899999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.+ +++++++++++||+++.|+|++|++.|.+||.
T Consensus 248 ~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 248 NM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 88 79999999999999999999999999999986
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=243.64 Aligned_cols=258 Identities=18% Similarity=0.211 Sum_probs=164.4
Q ss_pred cCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC----CCCchhHHHHH
Q 021229 31 LQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP----ERSESFQAECV 106 (315)
Q Consensus 31 ~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~a~~~ 106 (315)
..+|.+++|... +++++++||||||++.+.. .|..+++.|+++|+|+++|+||||.|+.+.. .++...+++++
T Consensus 111 ~~~~~~~~y~~~--G~~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 111 SSDLFRWFCVES--GSNNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred cCCceEEEEEec--CCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 456788888764 3345689999999998885 7999999999899999999999999976532 35667789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKEL 186 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (315)
.++++++++++++|+||||||++++.+|.++|++|+++|+++++................. .....+....+. ..
T Consensus 188 ~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~--~l~~~~~~~~~~--~~- 262 (383)
T PLN03084 188 ESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSN--FLLGEIFSQDPL--RA- 262 (383)
T ss_pred HHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHH--HHhhhhhhcchH--HH-
Confidence 9999999999999999999999999999999999999999987643211100000000000 000000000000 00
Q ss_pred HHhhhccCCCCCCCCcchhHHHHHHHHH-----HHHHHH-HHhhhccCc--ccccc--ccccCCCCeEEEEeCCCCCCch
Q 021229 187 MRYTFFKRPPLSLVPSCLLSDYIDAMCT-----EYLEEK-RELVRAIPK--DRKIS--NIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~--~~~~~--~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
....+...... .........+...... ...... ..+...+.. ..... ...++++|+|+|+|++|.+++.
T Consensus 263 ~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~ 341 (383)
T PLN03084 263 SDKALTSCGPY-AMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNY 341 (383)
T ss_pred HhhhhcccCcc-CCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCH
Confidence 00000000000 0000000000000000 000000 000000000 00000 1136899999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+.++.+++.. +++++++++|||++++|+|++++++|.+||.
T Consensus 342 ~~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 342 DGVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 9888888863 6899999999999999999999999999986
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=240.31 Aligned_cols=261 Identities=18% Similarity=0.250 Sum_probs=161.0
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQ 102 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~ 102 (315)
+....+.+ +|.++||... +++++||||||++.+.. .|..+++.|.++|+|+++|+||||.|+.+. ..++...+
T Consensus 14 ~~~~~~~~-~~~~i~y~~~----G~~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDE----GTGPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEH 87 (286)
T ss_pred ccceEEEc-CCcEEEEEEC----CCCCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHH
Confidence 34455666 4667888764 24579999999987764 699999999988999999999999997543 24556677
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
++++.+++++++.++++++||||||.+++.++..+|++|+++|++++...... ......+. ..... .+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~-----~~~~~-~~~~~~~ 160 (286)
T PRK03204 88 ARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPAD-TLAMKAFS-----RVMSS-PPVQYAI 160 (286)
T ss_pred HHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCC-chhHHHHH-----HHhcc-ccchhhh
Confidence 89999999999999999999999999999999999999999998865431111 00000000 00000 0000000
Q ss_pred H-HHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCccc-----cccccc--cCCCCeEEEEeCCCCC
Q 021229 183 L-KELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDR-----KISNID--KITQPTLILWGEHDQI 253 (315)
Q Consensus 183 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~--~i~~P~lvi~G~~D~~ 253 (315)
+ ...+...+................+...... ............+.... ....+. .+++|||+|+|++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~ 240 (286)
T PRK03204 161 LRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVA 240 (286)
T ss_pred hhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcc
Confidence 0 0000000000000000000000011000000 00000000000000000 000111 1389999999999998
Q ss_pred CchH-HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 254 FPLE-LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 254 ~~~~-~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
+++. ..+.+.+.+ +++++++++++||++++|+|++|++.|.+|+
T Consensus 241 ~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 241 FRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 8654 578888888 6899999999999999999999999999997
|
|
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=235.05 Aligned_cols=261 Identities=18% Similarity=0.198 Sum_probs=170.2
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-CCCchhHH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-ERSESFQA 103 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~a 103 (315)
..+++++ +|.+++|... +..++++|||+||++++.. .|..+++.|++.|+|+++|+||||.|+.+.. .++...++
T Consensus 7 ~~~~~~~-~~~~~~~~~~--g~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 82 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDM--GPTAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMA 82 (278)
T ss_pred ccceeeE-CCEEEEEEec--CCCCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHH
Confidence 3455666 5777777654 3334689999999998875 6999999999899999999999999976543 45677789
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc-cc-------hhhhhhhc
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV-SD-------LEEASKIL 175 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~ 175 (315)
+++.++++++++++++|+||||||++++.+|.++|++++++|++++........ ....... .. ........
T Consensus 83 ~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (278)
T TIGR03056 83 EDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM-AGTLFPYMARVLACNPFTPPMMSRG 161 (278)
T ss_pred HHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc-cccccchhhHhhhhcccchHHHHhh
Confidence 999999999999999999999999999999999999999999987643211100 0000000 00 00000000
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHH--HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCC
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE--YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
............ .... .........+ ...... ....................++++++|+++|+|++|.+
T Consensus 162 -~~~~~~~~~~~~----~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 162 -AADQQRVERLIR----DTGS--LLDKAGMTYY-GRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred -cccCcchhHHhh----cccc--ccccchhhHH-HHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 000000111100 0000 0000000001 000000 00001111111111112235678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+|.+.++.+.+.+ +++++++++++||+++.|+|++++++|.+|++
T Consensus 234 vp~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 9999999999888 68999999999999999999999999999984
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=242.43 Aligned_cols=278 Identities=28% Similarity=0.448 Sum_probs=175.0
Q ss_pred cceeeeeeecCCC--ceEEEEEecC------CCCCCCcEEEEccCCCChhhhHHhhHhhcccc--ceEEeecCCCCCCCC
Q 021229 22 LGFRSSVTDLQDG--SVMHCWVPKT------RNDSKPDLVLIHGLGANALWQWTNIIPHMIHY--FNVYVPDLLFFGDSF 91 (315)
Q Consensus 22 ~~~~~~~~~~~~g--~~~~~~~~~~------~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~--~~vi~~D~~G~G~S~ 91 (315)
.++.+..+.+..| ...+-|.... ++..+++||+||||+++.. .|+.+++.|.+. ++|+++|++|||.|+
T Consensus 23 ~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~-~w~~~~~~L~~~~~~~v~aiDl~G~g~~s 101 (326)
T KOG1454|consen 23 VTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSF-SWRRVVPLLSKAKGLRVLAIDLPGHGYSS 101 (326)
T ss_pred ccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcc-cHhhhccccccccceEEEEEecCCCCcCC
Confidence 3456677777777 5556665322 1136889999999999774 799999999988 999999999999554
Q ss_pred C-CC-CCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeE---EeeCCCccCchhhhhhhhccc
Q 021229 92 T-TR-PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV---ICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 92 ~-~~-~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~li---l~~~~~~~~~~~~~~~~~~~~ 166 (315)
. +. +.++.....+.+..++...+.++++|+||||||.+|+.+|+.+|+.|+++| +++++....+...........
T Consensus 102 ~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 181 (326)
T KOG1454|consen 102 PLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLD 181 (326)
T ss_pred CCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhh
Confidence 3 22 334555567788888888899999999999999999999999999999999 544443332221000000000
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCC-CCCCCcchhHHHHHHHHH-----HHHHHHHHhhhccCc--ccccccccc
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPP-LSLVPSCLLSDYIDAMCT-----EYLEEKRELVRAIPK--DRKISNIDK 238 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~l~~ 238 (315)
..........+.........+......... ....+..........+.. ........++..+.. ......+++
T Consensus 182 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (326)
T KOG1454|consen 182 KFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKK 261 (326)
T ss_pred hhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhcc
Confidence 000111111111111000100000000000 000011111111111110 011111122222222 122334567
Q ss_pred CC-CCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 239 IT-QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 239 i~-~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+. +|+|+|||++|+++|.+.++.+.+.+ +++++++|++|||.+++|.|++++++|..|++..
T Consensus 262 i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 262 IWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 76 99999999999999999999999998 8999999999999999999999999999999864
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=247.46 Aligned_cols=270 Identities=18% Similarity=0.289 Sum_probs=163.2
Q ss_pred eeeecCCCceEEEEEecCCC-CCCCcEEEEccCCCChhhhHHh-hHhhcc----ccceEEeecCCCCCCCCCCC-CCCCc
Q 021229 27 SVTDLQDGSVMHCWVPKTRN-DSKPDLVLIHGLGANALWQWTN-IIPHMI----HYFNVYVPDLLFFGDSFTTR-PERSE 99 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~w~~-~~~~l~----~~~~vi~~D~~G~G~S~~~~-~~~~~ 99 (315)
.+++++ |..+|++...+.+ +.+++||||||++++.. .|.. +++.|. ++|+|+++|+||||.|..+. ..++.
T Consensus 179 ~~~~~~-~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl 256 (481)
T PLN03087 179 SWLSSS-NESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTL 256 (481)
T ss_pred eeEeeC-CeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCH
Confidence 455554 5788888764332 23579999999999886 5875 446665 57999999999999997542 23555
Q ss_pred hhHHHHHH-HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 100 SFQAECVM-RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 100 ~~~a~~~~-~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
..+++++. .+++++++++++|+||||||++++.+|.++|++|+++|+++++....+............. .....+...
T Consensus 257 ~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 335 (481)
T PLN03087 257 REHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKV-APRRVWPPI 335 (481)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHh-cccccCCcc
Confidence 66677774 7899999999999999999999999999999999999999865432221100000000000 000000000
Q ss_pred CchH----HHHHHHhhh----ccCCC-CC-----CCCcchhHHHHHHHHHH----HHHHHHHhhhccC-c-cccc-cccc
Q 021229 179 SPGK----LKELMRYTF----FKRPP-LS-----LVPSCLLSDYIDAMCTE----YLEEKRELVRAIP-K-DRKI-SNID 237 (315)
Q Consensus 179 ~~~~----~~~~~~~~~----~~~~~-~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~-~~~~-~~l~ 237 (315)
.... +.+...... ..... +. ..+......+.+..... .......+..... . .... ..+.
T Consensus 336 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~ 415 (481)
T PLN03087 336 AFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRD 415 (481)
T ss_pred ccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHH
Confidence 0000 000000000 00000 00 00000000000000000 0000000010000 0 0001 1223
Q ss_pred cCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhc
Q 021229 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 238 ~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 300 (315)
+|++|+|+|+|++|.++|++.++.+++.+ +++++++++++||++++ |+|++|++.|.+|...
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 68999999999999999999999999999 78999999999999986 9999999999999864
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=243.12 Aligned_cols=267 Identities=17% Similarity=0.229 Sum_probs=165.6
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhh-----------hHHhhHh---hc-cccceEEeecCCCC
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALW-----------QWTNIIP---HM-IHYFNVYVPDLLFF 87 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~-----------~w~~~~~---~l-~~~~~vi~~D~~G~ 87 (315)
+++.....+ +|..++|... ++ .++|+|||||++++... .|..+++ .| .++|+||++|+|||
T Consensus 35 ~~~~~~~~~-~~~~l~y~~~--G~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~ 110 (343)
T PRK08775 35 PLSMRHAGL-EDLRLRYELI--GP-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGA 110 (343)
T ss_pred ceeecCCCC-CCceEEEEEe--cc-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCC
Confidence 455555555 6778888875 22 24468888776665441 3888886 56 46899999999999
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHcCCCce-EEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhccc
Q 021229 88 GDSFTTRPERSESFQAECVMRVMEAHSVKKL-SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 88 G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v-~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
|.|.. ..++...+++++.+++++++++++ +|+||||||+||+.+|.++|++|+++|++++........ .......
T Consensus 111 g~s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~--~~~~~~~ 186 (343)
T PRK08775 111 DGSLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA--AAWRALQ 186 (343)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH--HHHHHHH
Confidence 98842 234556679999999999999775 799999999999999999999999999998754322110 0000000
Q ss_pred chhhhhhhccC---CCc--hHHHH----------HHHhhhccCCCCCCCCc---chhHHHHHHHHHH-----HHHHHHHh
Q 021229 167 DLEEASKILVP---QSP--GKLKE----------LMRYTFFKRPPLSLVPS---CLLSDYIDAMCTE-----YLEEKREL 223 (315)
Q Consensus 167 ~~~~~~~~~~~---~~~--~~~~~----------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~ 223 (315)
......... ... ..... .+...+..... .... .....++...... ........
T Consensus 187 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 262 (343)
T PRK08775 187 --RRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPE--VINGRVRVAAEDYLDAAGAQYVARTPVNAYLRL 262 (343)
T ss_pred --HHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCcc--ccCCCccchHHHHHHHHHHHHHHhcChhHHHHH
Confidence 000000000 000 00000 00011111100 0000 0011111110000 00000111
Q ss_pred hhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcC-CCCccccCChHHHHHHHHHHHhcCC
Q 021229 224 VRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK-AGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 224 ~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
...... ....+.+|++|+|+|+|++|.++|++..+.+.+.+.++++++++++ +||++++|+|++|++.|.+||++..
T Consensus 263 ~~~~~~--~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 263 SESIDL--HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HHHHhh--cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 111100 1123678999999999999999999888889887756899999985 9999999999999999999998765
Q ss_pred C
Q 021229 303 P 303 (315)
Q Consensus 303 ~ 303 (315)
.
T Consensus 341 ~ 341 (343)
T PRK08775 341 E 341 (343)
T ss_pred c
Confidence 4
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=231.01 Aligned_cols=237 Identities=18% Similarity=0.234 Sum_probs=158.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEch
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSm 125 (315)
++++|+|||+||++++.. .|..+...|.++|+|+++|+||||.|... ...+...+++++.+++++++.++++|+||||
T Consensus 13 ~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred CCCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCCCceEEEEECH
Confidence 456789999999998886 59999999999999999999999999753 3456667799999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchh
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLL 205 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (315)
||++++.+|.++|++|+++|++++++............. ........ ...........+...+ . ....
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~-~--------~~~~ 158 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFA--AINAVSEA-GATTRQQAAAIMRQHL-N--------EEGV 158 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHH--HHHHhhhc-ccccHHHHHHHHHHhc-C--------CHHH
Confidence 999999999999999999999975432211100000000 00000000 0000000001100000 0 0000
Q ss_pred HHHHHHHHHH-----HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 206 SDYIDAMCTE-----YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 206 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
..+....... ........+... .....+.++++|+|+|+|++|.+++.+..+.+++.+ +++++++++++||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH 234 (255)
T PRK10673 159 IQFLLKSFVDGEWRFNVPVLWDQYPHI---VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGH 234 (255)
T ss_pred HHHHHhcCCcceeEeeHHHHHHhHHHH---hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCC
Confidence 0000000000 000000000000 012345678999999999999999999999999988 6899999999999
Q ss_pred ccccCChHHHHHHHHHHHhc
Q 021229 281 AFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 281 ~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++.|+|+++++.|.+||++
T Consensus 235 ~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 235 WVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999975
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=229.86 Aligned_cols=236 Identities=18% Similarity=0.189 Sum_probs=148.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGF 128 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ 128 (315)
+|+||||||+++++. .|..+++.|. +|+|+++|+||||.|..+.. .+...+++++.++++++++++++|+||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 568999999999885 7999999985 79999999999999975433 35666789999999999999999999999999
Q ss_pred HHHHHHHhhhhh-hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 129 VGYSMAAQFKEK-IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 129 ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
+|+.+|.++|+. |++++++++............ ...........+.... ....+...+..... ..........
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~ 152 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQA--RWQNDRQWAQRFRQEP---LEQVLADWYQQPVF-ASLNAEQRQQ 152 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHH--HHhhhHHHHHHhccCc---HHHHHHHHHhcchh-hccCccHHHH
Confidence 999999999664 999998876543322110000 0000000000000000 11111111100000 0001111111
Q ss_pred HHHHHHHHHHHHHHHhhhcc---CccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc
Q 021229 208 YIDAMCTEYLEEKRELVRAI---PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284 (315)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~ 284 (315)
+...............+... ...+....+.++++|+++|+|++|..+. .+++. .+++++++++|||++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~ 225 (242)
T PRK11126 153 LVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHR 225 (242)
T ss_pred HHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH--hcCeEEEeCCCCCchhh
Confidence 11111000001111111111 1122334677899999999999998653 23332 26899999999999999
Q ss_pred CChHHHHHHHHHHHhc
Q 021229 285 EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 285 e~p~~~~~~i~~fl~~ 300 (315)
|+|+++++.|.+|+++
T Consensus 226 e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 226 ENPAAFAASLAQILRL 241 (242)
T ss_pred hChHHHHHHHHHHHhh
Confidence 9999999999999975
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=227.61 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=163.8
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCC
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVK 116 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~ 116 (315)
++|+...+ ++++|+|||+||++.+.. .|.++++.|.++|+|+++|+||||.|.......+....++++.++++.++.+
T Consensus 2 ~~~~~~g~-~~~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~ 79 (251)
T TIGR02427 2 LHYRLDGA-ADGAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE 79 (251)
T ss_pred ceEEeecC-CCCCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 45654422 225678999999998886 5999999999899999999999999975545556667788999999999999
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (315)
+++|+||||||++++.+|.++|++|+++|++++............... . ................+.....
T Consensus 80 ~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR02427 80 RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIA-----A----VRAEGLAALADAVLERWFTPGF 150 (251)
T ss_pred ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHh-----h----hhhccHHHHHHHHHHHHccccc
Confidence 999999999999999999999999999999876543222110000000 0 0000000000000001111000
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEc
Q 021229 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIK 276 (315)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~ 276 (315)
..........+...+..............+...+....+.++++|+++|+|++|.++|.+..+.+.+.+ ++.++++++
T Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (251)
T TIGR02427 151 -REAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-PGARFAEIR 228 (251)
T ss_pred -ccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC-CCceEEEEC
Confidence 000001111111111111111111111111112223456788999999999999999999999998888 688999999
Q ss_pred CCCCccccCChHHHHHHHHHHHh
Q 021229 277 KAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 277 ~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
++||++++|+|+++.+.|.+|+.
T Consensus 229 ~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 229 GAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999999999974
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=230.91 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=161.6
Q ss_pred EEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcCCC
Q 021229 38 HCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHSVK 116 (315)
Q Consensus 38 ~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~~~ 116 (315)
+|....+...++|+|||+||+++++. .|..+++.+.++|+|+++|+||||.|.... ...+....++++.++++.++.+
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 45554322345789999999999886 599999999889999999999999997542 3455666788999999999999
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (315)
+++|+||||||++++.++.++|++|+++|++++........ ....... ...... ..............+.. .
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~-~ 152 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-RRCFDVR---IALLQH---AGPEAYVHAQALFLYPA-D 152 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH-HHHHHHH---HHHHhc---cCcchhhhhhhhhhccc-c
Confidence 99999999999999999999999999999987543322110 0000000 000000 00000000000000000 0
Q ss_pred CCCCCc---chhHHHHHHHHH-HHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEE
Q 021229 197 LSLVPS---CLLSDYIDAMCT-EYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQL 272 (315)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~ 272 (315)
+... ............ ............+...+....+.++++|+++++|++|.++|.+.++.+.+.+ +++++
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~ 229 (257)
T TIGR03611 153 --WISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL-PNAQL 229 (257)
T ss_pred --HhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc-CCceE
Confidence 0000 000000000000 0000000000111111222456788999999999999999999999999888 68899
Q ss_pred EEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 273 IVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 273 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.++++||++++|+|+++++.|.+||++
T Consensus 230 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 230 KLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999863
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-32 Score=225.47 Aligned_cols=275 Identities=21% Similarity=0.312 Sum_probs=171.5
Q ss_pred hhcceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC----C
Q 021229 20 KRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR----P 95 (315)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~----~ 95 (315)
+.-.+..+++.+.++..+.......+...+.|+|||||+|++.. .|...++.|++.++|+++|++|+|.|+.+. +
T Consensus 61 ~~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g-~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~ 139 (365)
T KOG4409|consen 61 VPVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLG-LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDP 139 (365)
T ss_pred cCCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHH-HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCc
Confidence 33445666777876654444443334456789999999999886 499999999999999999999999998653 2
Q ss_pred CCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-hhhhhhhcccchhhhh-h
Q 021229 96 ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLRDRMFKVSDLEEAS-K 173 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~~~-~ 173 (315)
...+.++.+.++++....+++|.+|+||||||.+|..||.+||++|++|||+++....... ...........+..+. .
T Consensus 140 ~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 140 TTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFL 219 (365)
T ss_pred ccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhh
Confidence 2234466888999999999999999999999999999999999999999999875433211 0000000000000000 0
Q ss_pred hccCCCchHHHHHH-----------HhhhccCCCCCCCCcchhHHH----HHHHHHHH---HHHHHHhhhcc--Cccccc
Q 021229 174 ILVPQSPGKLKELM-----------RYTFFKRPPLSLVPSCLLSDY----IDAMCTEY---LEEKRELVRAI--PKDRKI 233 (315)
Q Consensus 174 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~--~~~~~~ 233 (315)
......+..+.+.+ ....++. .+.....++ +-...... ......+++.. .+....
T Consensus 220 ~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k-----~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~ 294 (365)
T KOG4409|consen 220 VATNFNPLALLRLMGPLGPKLVSRLRPDRFRK-----FPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMI 294 (365)
T ss_pred hhhcCCHHHHHHhccccchHHHhhhhHHHHHh-----ccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHH
Confidence 00111111111111 0011111 111112222 11111100 00111122111 111123
Q ss_pred cccccCC--CCeEEEEeCCCCCCchHHHHHHHhhc-CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 234 SNIDKIT--QPTLILWGEHDQIFPLELGRRLKSHL-GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 234 ~~l~~i~--~P~lvi~G~~D~~~~~~~~~~l~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++..++ +|+++|+|++|- +....+..+.+.+ ...++.++++++||.+..|+|+.|++.|.+++.+.
T Consensus 295 ~r~~~l~~~~pv~fiyG~~dW-mD~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGDRDW-MDKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHhhccCCCEEEEecCccc-ccchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 4455555 999999999984 4566666666543 24589999999999999999999999999999764
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=229.48 Aligned_cols=239 Identities=20% Similarity=0.242 Sum_probs=146.4
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGF 128 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ 128 (315)
+++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.... ..+....++++. .+..++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~----~~~~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGFG-PLSLADAAEAIA----AQAPDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCCC-CcCHHHHHHHHH----HhCCCCeEEEEEcHHHH
Confidence 378999999999886 699999999988999999999999986432 223333333332 23347999999999999
Q ss_pred HHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHH
Q 021229 129 VGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDY 208 (315)
Q Consensus 129 ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (315)
+++.++.++|++++++|++++.........................+..........+.......... .......+
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 153 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT----ARQDARAL 153 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc----cchHHHHH
Confidence 99999999999999999997655332111000000000000000000000000011111100000000 00000000
Q ss_pred HHHHHHH---HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC
Q 021229 209 IDAMCTE---YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285 (315)
Q Consensus 209 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e 285 (315)
....... ........+..+...+....+.++++|+++|+|++|.++|.+..+.+.+.+ +++++++++++||++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLS 232 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCcccc
Confidence 0000000 000011111111111223356789999999999999999999999999888 689999999999999999
Q ss_pred ChHHHHHHHHHHH
Q 021229 286 KPKEFYKHLKSFL 298 (315)
Q Consensus 286 ~p~~~~~~i~~fl 298 (315)
+|++|++.|.+|+
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999996
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=235.46 Aligned_cols=261 Identities=16% Similarity=0.187 Sum_probs=163.9
Q ss_pred eeeeeecCCCceEEEEEecCC-CCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC-CCchh
Q 021229 25 RSSVTDLQDGSVMHCWVPKTR-NDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE-RSESF 101 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~~~~~ 101 (315)
.+.+...++|..+++....+. +..+++|||+||++++..+.|..+.+.|.+ +|+|+++|+||||.|+..... .+...
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 141 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDD 141 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHH
Confidence 344555578888887654332 234678999999988765447888888875 699999999999999754322 24555
Q ss_pred HHHHHHHHHHHcCC------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 102 QAECVMRVMEAHSV------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 102 ~a~~~~~~l~~l~~------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
+++++.++++.+.. .+++|+||||||++++.++.++|++++++|++++.............. ..........
T Consensus 142 ~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~--~~~~~~~~~~ 219 (349)
T PLN02385 142 LVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV--LQILILLANL 219 (349)
T ss_pred HHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH--HHHHHHHHHH
Confidence 67888888877653 379999999999999999999999999999998654321100000000 0000000000
Q ss_pred cCCC----chH-----HHHHHHhhh--ccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeE
Q 021229 176 VPQS----PGK-----LKELMRYTF--FKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTL 244 (315)
Q Consensus 176 ~~~~----~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 244 (315)
.+.. ... ......... +.... ........... .++... ......+.++++|+|
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------------~~l~~~--~~~~~~l~~i~~P~L 283 (349)
T PLN02385 220 LPKAKLVPQKDLAELAFRDLKKRKMAEYNVIA--YKDKPRLRTAV------------ELLRTT--QEIEMQLEEVSLPLL 283 (349)
T ss_pred CCCceecCCCccccccccCHHHHHHhhcCcce--eCCCcchHHHH------------HHHHHH--HHHHHhcccCCCCEE
Confidence 0000 000 000000000 00000 00000000000 000000 011234678999999
Q ss_pred EEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHH----HHHHHHHHHhcCCC
Q 021229 245 ILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKE----FYKHLKSFLLDSQP 303 (315)
Q Consensus 245 vi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~~~ 303 (315)
+|+|++|.++|++.++.+.+.+. +++++++++++||+++.|+|++ +++.|.+||.+..+
T Consensus 284 ii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 284 ILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred EEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999988773 4689999999999999999987 88889999986543
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-31 Score=236.12 Aligned_cols=268 Identities=15% Similarity=0.170 Sum_probs=161.9
Q ss_pred CCceEEEEEecCC-CCCCCcEEEEccCCCChhh------------hHHhhH----hhccccceEEeecCCCC-CCCCCCC
Q 021229 33 DGSVMHCWVPKTR-NDSKPDLVLIHGLGANALW------------QWTNII----PHMIHYFNVYVPDLLFF-GDSFTTR 94 (315)
Q Consensus 33 ~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~------------~w~~~~----~~l~~~~~vi~~D~~G~-G~S~~~~ 94 (315)
+|..++|...... .+++|+|||+||++++... .|..++ +.+.++|+||++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 3556788765321 1236899999999998751 277776 34467899999999983 5443221
Q ss_pred --------------CCCCchhHHHHHHHHHHHcCCCc-eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh-
Q 021229 95 --------------PERSESFQAECVMRVMEAHSVKK-LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL- 158 (315)
Q Consensus 95 --------------~~~~~~~~a~~~~~~l~~l~~~~-v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~- 158 (315)
+.++...+++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 13566678999999999999999 49999999999999999999999999999987654332110
Q ss_pred -hhhhhcc-cchhhhh-hhcc--CCCch---HHHH-----------HHHhhhccCCC-----CCCCCcchhHHHHHHHHH
Q 021229 159 -RDRMFKV-SDLEEAS-KILV--PQSPG---KLKE-----------LMRYTFFKRPP-----LSLVPSCLLSDYIDAMCT 214 (315)
Q Consensus 159 -~~~~~~~-~~~~~~~-~~~~--~~~~~---~~~~-----------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 214 (315)
....... ....... .... ...+. ...+ .+...|..... ..+........+......
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 270 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGD 270 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHH
Confidence 0000000 0000000 0000 00000 0000 00011111000 000011111111110000
Q ss_pred H-----HHHHHHHhhhccCc--------cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCc----EEEEEc-
Q 021229 215 E-----YLEEKRELVRAIPK--------DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA----QLIVIK- 276 (315)
Q Consensus 215 ~-----~~~~~~~~~~~~~~--------~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~----~~~~i~- 276 (315)
. ...........+.. .+....+.+|++|||+|+|++|.++|++.++.+++.+ +++ ++++++
T Consensus 271 ~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i-~~a~~~~~l~~i~~ 349 (379)
T PRK00175 271 KFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL-LAAGADVSYAEIDS 349 (379)
T ss_pred HHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH-HhcCCCeEEEEeCC
Confidence 0 00000111111100 1134567889999999999999999999999999998 565 777785
Q ss_pred CCCCccccCChHHHHHHHHHHHhcC
Q 021229 277 KAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 277 ~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++||.+++|+|++|++.|.+||++.
T Consensus 350 ~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 350 PYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred CCCchhHhcCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999864
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-30 Score=230.92 Aligned_cols=257 Identities=17% Similarity=0.225 Sum_probs=153.7
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCC-----chhHHHHHHHHHHHcCCCceEE
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERS-----ESFQAECVMRVMEAHSVKKLSL 120 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~-----~~~~a~~~~~~l~~l~~~~v~l 120 (315)
++++|+|||+||++.+.. .|...++.|.++|+|+++|+||||.|+.+..... ....++++.++++.+++++++|
T Consensus 102 ~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 345689999999998775 5888888898889999999999999975432211 1223566778888889999999
Q ss_pred EEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-hhhhhhhcc-cchh---------------hhhhhccCCCchHH
Q 021229 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLRDRMFKV-SDLE---------------EASKILVPQSPGKL 183 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~-~~~~~~~~~-~~~~---------------~~~~~~~~~~~~~~ 183 (315)
+||||||.+|+.+|.++|++|+++|++++....... ......... .... .......+..+...
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999999999999999999998764332211 100000000 0000 00000000001111
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHH-----HHHHHHHhhhc---cCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-----YLEEKRELVRA---IPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
.......+................+.+..... ..+........ ....+....+.+|++|+++|+|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 11111111110000000111111111111000 00000011111 11122334577899999999999998776
Q ss_pred hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 256 LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 256 ~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
...+.+.+..++.+++++++++||+++.|+|++|++.|.+|++.....
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 445556555544689999999999999999999999999998865544
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-31 Score=234.15 Aligned_cols=268 Identities=13% Similarity=0.131 Sum_probs=155.2
Q ss_pred CCceEEEEEecCCC-CCCCcEEEEccCCCChhhhHHhhH---hhcc-ccceEEeecCCCCCCCCCCCC---CCCch----
Q 021229 33 DGSVMHCWVPKTRN-DSKPDLVLIHGLGANALWQWTNII---PHMI-HYFNVYVPDLLFFGDSFTTRP---ERSES---- 100 (315)
Q Consensus 33 ~g~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~w~~~~---~~l~-~~~~vi~~D~~G~G~S~~~~~---~~~~~---- 100 (315)
+|.+++|....+++ ++.++||++||++.+..+ |..++ +.|. ++|+||++|+||||.|..+.. .++..
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~-~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD-NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCccc-chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 45678887764322 233456666777656543 65443 4665 579999999999999975421 22221
Q ss_pred -hHHHHHHH----HHHHcCCCc-eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh--hhhhc-ccchhhh
Q 021229 101 -FQAECVMR----VMEAHSVKK-LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR--DRMFK-VSDLEEA 171 (315)
Q Consensus 101 -~~a~~~~~----~l~~l~~~~-v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~--~~~~~-~~~~~~~ 171 (315)
..++++.+ +++++++++ ++||||||||++|+.+|.++|++|+++|++++.......... ..... +......
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 13555554 778899999 589999999999999999999999999999765532211100 00000 0000000
Q ss_pred hhhccCCCc-hHHH---HHH-----HhhhccCCCCCCCCcchhHHHHHHHHHH-----HHHHHHHhhhc-----cC-c--
Q 021229 172 SKILVPQSP-GKLK---ELM-----RYTFFKRPPLSLVPSCLLSDYIDAMCTE-----YLEEKRELVRA-----IP-K-- 229 (315)
Q Consensus 172 ~~~~~~~~~-~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~-~-- 229 (315)
........+ ..+. ... ...+.+.............++....... ........+.. +. .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (339)
T PRK07581 183 NGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPA 262 (339)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcc
Confidence 000000000 0000 000 0011110000000000001111111000 00011111100 00 0
Q ss_pred --cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcC-CCCccccCChHHHHHHHHHHHhcCC
Q 021229 230 --DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK-AGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 230 --~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.+....+.+|++|||+|+|++|.++|++.++.+++.+ ++++++++++ +||++++|+|+++++.|.+||++..
T Consensus 263 ~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 263 YGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred cCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 1223457789999999999999999999999999988 6899999998 9999999999999999999998754
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=220.43 Aligned_cols=249 Identities=16% Similarity=0.178 Sum_probs=155.5
Q ss_pred ecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC-CCCchhHHHHHH
Q 021229 30 DLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP-ERSESFQAECVM 107 (315)
Q Consensus 30 ~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~ 107 (315)
.-+||..+++....+++..++.|+|+||++.++. .|..+++.|.+ +|+|+++|+||||.|..... ........+++.
T Consensus 6 ~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~ 84 (276)
T PHA02857 6 FNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVV 84 (276)
T ss_pred ecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHH
Confidence 3458888888654444444556666799998886 59999999976 59999999999999964321 112222344555
Q ss_pred HHHHHc----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC-----
Q 021229 108 RVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ----- 178 (315)
Q Consensus 108 ~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 178 (315)
+.++.+ ..++++|+||||||++|+.+|.++|++++++|++++............... .......+.
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 159 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAA-----KLMGIFYPNKIVGK 159 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHH-----HHHHHhCCCCccCC
Confidence 555432 346899999999999999999999999999999987543211100000000 000000000
Q ss_pred -CchH----HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCC
Q 021229 179 -SPGK----LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 179 -~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
.+.. ..+... ....... ........+...+.. . .......+.++++|+|+|+|++|.+
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~--------~-----~~~~~~~l~~i~~Pvliv~G~~D~i 222 (276)
T PHA02857 160 LCPESVSRDMDEVYK-YQYDPLV---NHEKIKAGFASQVLK--------A-----TNKVRKIIPKIKTPILILQGTNNEI 222 (276)
T ss_pred CCHhhccCCHHHHHH-HhcCCCc---cCCCccHHHHHHHHH--------H-----HHHHHHhcccCCCCEEEEecCCCCc
Confidence 0000 000000 0000000 000001111111100 0 0011235678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCCh---HHHHHHHHHHHhcC
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLDS 301 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 301 (315)
+|++.++.+.+.+.+++++.+++++||.++.|++ +++.+.+.+||.+.
T Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 223 SDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999999998887557899999999999999977 57889999999865
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=226.16 Aligned_cols=267 Identities=16% Similarity=0.223 Sum_probs=161.8
Q ss_pred eeeeecCCCceEEEEEecCCC--CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC-CCCchh
Q 021229 26 SSVTDLQDGSVMHCWVPKTRN--DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP-ERSESF 101 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~--~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~ 101 (315)
....+..||..++++...+.+ +.+++|||+||++.+..|.|......|.. +|+|+++|+||||.|..... ..+...
T Consensus 34 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 113 (330)
T PLN02298 34 KSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDL 113 (330)
T ss_pred cceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHH
Confidence 345666789989886543221 23557999999987654556666666765 69999999999999964322 234455
Q ss_pred HHHHHHHHHHHcCC------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 102 QAECVMRVMEAHSV------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 102 ~a~~~~~~l~~l~~------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
+++++.++++.+.. .+++|+||||||++++.++.++|++|+++|++++........ ... +...........+
T Consensus 114 ~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 191 (330)
T PLN02298 114 VVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKI-RPP-WPIPQILTFVARF 191 (330)
T ss_pred HHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCccc-CCc-hHHHHHHHHHHHH
Confidence 67888888887642 369999999999999999999999999999997654221100 000 0000000000000
Q ss_pred cCCC-----chHHHH----HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 176 VPQS-----PGKLKE----LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 176 ~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
.+.. ...+.. .....+.......+...... .... .++.. .......+.++++|+|+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~--~~~~~~~l~~i~~PvLii 257 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRL-GTVV-----------ELLRV--TDYLGKKLKDVSIPFIVL 257 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccH-HHHH-----------HHHHH--HHHHHHhhhhcCCCEEEE
Confidence 0000 000000 00000000000000000000 0000 00000 000123467889999999
Q ss_pred EeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChH----HHHHHHHHHHhcCCCCCCCC
Q 021229 247 WGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPK----EFYKHLKSFLLDSQPSPLPP 308 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~~~~~~~~ 308 (315)
+|++|.++|++.++.+++.++ +++++++++++||.+++++|+ ++.+.|.+||.+.....+.|
T Consensus 258 ~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~ 324 (330)
T PLN02298 258 HGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATP 324 (330)
T ss_pred ecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999988763 468999999999999999986 46678889998765444444
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=220.80 Aligned_cols=250 Identities=20% Similarity=0.222 Sum_probs=156.8
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVM 110 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l 110 (315)
||..+++... ++++|+|||+||++.+.. .|.+++..|.+ +|+|+++|+||||.|.... ...+...+++++.+++
T Consensus 5 ~~~~~~~~~~---~~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 5 NGEEVTDMKP---NRQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccccccc---cCCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHH
Confidence 5666666652 345789999999998874 79999999975 6999999999999875332 2356666788899999
Q ss_pred HHcC-CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh-cccchhhhhhh----cc--C----C
Q 021229 111 EAHS-VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF-KVSDLEEASKI----LV--P----Q 178 (315)
Q Consensus 111 ~~l~-~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~--~----~ 178 (315)
++++ .++++||||||||++++.++.++|++|+++|++++.............. ........... .. . .
T Consensus 81 ~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T PLN02211 81 SSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPT 160 (273)
T ss_pred HhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCc
Confidence 9985 5899999999999999999999999999999997643211110000000 00000000000 00 0 0
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC-CCCeEEEEeCCCCCCchH
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI-TQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~ 257 (315)
......++....+++. .+... ..+..... ...-...+...........+ ++|+++|+|++|+++|++
T Consensus 161 ~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 161 SAIIKKEFRRKILYQM-----SPQED-STLAAMLL------RPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred eeeeCHHHHHHHHhcC-----CCHHH-HHHHHHhc------CCcCccccccccccccccccCccceEEEEeCCCCCCCHH
Confidence 0000000000001110 00000 00000000 00000111111111123345 789999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 258 LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 258 ~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.++.+.+.+ +.++++.++ +||.+++++|+++.+.|.++...
T Consensus 229 ~~~~m~~~~-~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 229 QQEAMIKRW-PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHhC-CccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 999999988 577999996 89999999999999999998754
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=230.85 Aligned_cols=266 Identities=16% Similarity=0.217 Sum_probs=160.5
Q ss_pred CCceEEEEEecCC-CCCCCcEEEEccCCCChhh----------hHHhhH----hhccccceEEeecCCC--CCCCCCC--
Q 021229 33 DGSVMHCWVPKTR-NDSKPDLVLIHGLGANALW----------QWTNII----PHMIHYFNVYVPDLLF--FGDSFTT-- 93 (315)
Q Consensus 33 ~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~----------~w~~~~----~~l~~~~~vi~~D~~G--~G~S~~~-- 93 (315)
+|..++|....+. .+++++|||+||++++... .|..++ ..+.++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 4678888775321 1235789999999986521 288776 4446779999999999 5655321
Q ss_pred ----------CCCCCchhHHHHHHHHHHHcCCCc-eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh--hhh
Q 021229 94 ----------RPERSESFQAECVMRVMEAHSVKK-LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD--LRD 160 (315)
Q Consensus 94 ----------~~~~~~~~~a~~~~~~l~~l~~~~-v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~ 160 (315)
.+.++...+++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++........ ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 013455677899999999999999 9999999999999999999999999999998765433211 000
Q ss_pred hhhc-ccchhhhh-hhccCC-Cch---HHHHH-----------HHhhhccCCCCCCCC------cchhHHHHHHHHHHH-
Q 021229 161 RMFK-VSDLEEAS-KILVPQ-SPG---KLKEL-----------MRYTFFKRPPLSLVP------SCLLSDYIDAMCTEY- 216 (315)
Q Consensus 161 ~~~~-~~~~~~~~-~~~~~~-~~~---~~~~~-----------~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~- 216 (315)
.... ........ ...... .+. ...+. +...|.........+ ......+........
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 0000 00000000 000000 000 00000 111111110000000 001111211100000
Q ss_pred ----HHHHHHhhhccCc-------cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEE-----EEcCCCC
Q 021229 217 ----LEEKRELVRAIPK-------DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI-----VIKKAGH 280 (315)
Q Consensus 217 ----~~~~~~~~~~~~~-------~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~-----~i~~~gH 280 (315)
..........+.. .+....+.+|++|+|+|+|++|.++|++.++.+++.+ ++++++ +++++||
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i-~~~~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL-PAAGLRVTYVEIESPYGH 332 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH-hhcCCceEEEEeCCCCCc
Confidence 0000011111111 1123567889999999999999999999999999998 577655 5679999
Q ss_pred ccccCChHHHHHHHHHHHh
Q 021229 281 AFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 281 ~~~~e~p~~~~~~i~~fl~ 299 (315)
.+++|+|++|++.|.+||+
T Consensus 333 ~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 333 DAFLVETDQVEELIRGFLR 351 (351)
T ss_pred chhhcCHHHHHHHHHHHhC
Confidence 9999999999999999984
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-31 Score=217.02 Aligned_cols=222 Identities=25% Similarity=0.372 Sum_probs=148.4
Q ss_pred EEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC--CCCchhHHHHHHHHHHHcCCCceEEEEEchhHHH
Q 021229 52 LVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP--ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFV 129 (315)
Q Consensus 52 vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~i 129 (315)
|||+||++++.. .|..+++.|+++|+|+++|+||||.|..... ..+....++++.+++++++.++++|+|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999885 6999999998889999999999999975442 3455667899999999999999999999999999
Q ss_pred HHHHHHhhhhhhceeEEeeCCCccCchh--h-hhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhH
Q 021229 130 GYSMAAQFKEKIEKVVICCSGVCLEEQD--L-RDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLS 206 (315)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (315)
++.++.++|++|+++|+++++....... . ...... .... ........+....+... .......
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~~ 145 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIR-----RLLA----WRSRSLRRLASRFFYRW-----FDGDEPE 145 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHH-----HHHH----HHHHHHHHHHHHHHHHH-----HTHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhh-----hhhh----ccccccccccccccccc-----ccccccc
Confidence 9999999999999999998766432110 0 000000 0000 00000001100011000 0000001
Q ss_pred HHHHHHHHHHHHHHHHhhhc-cCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC
Q 021229 207 DYIDAMCTEYLEEKRELVRA-IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285 (315)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e 285 (315)
++... ........... .........++++++|+++|+|++|.+++.+..+.+.+.+ +++++++++++||++++|
T Consensus 146 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~ 220 (228)
T PF12697_consen 146 DLIRS----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL-PNAELVVIPGAGHFLFLE 220 (228)
T ss_dssp HHHHH----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHH
T ss_pred ccccc----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCccHHH
Confidence 11110 01111111110 0011122456678999999999999999999999999888 689999999999999999
Q ss_pred ChHHHHHH
Q 021229 286 KPKEFYKH 293 (315)
Q Consensus 286 ~p~~~~~~ 293 (315)
+|++|+++
T Consensus 221 ~p~~~~~a 228 (228)
T PF12697_consen 221 QPDEVAEA 228 (228)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhcC
Confidence 99999874
|
... |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=259.61 Aligned_cols=280 Identities=19% Similarity=0.330 Sum_probs=174.5
Q ss_pred hcchhhcceeeeeeecCCCceEEEEEec--CC-CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCC
Q 021229 16 KSCFKRLGFRSSVTDLQDGSVMHCWVPK--TR-NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92 (315)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~ 92 (315)
.+++...+++...+.++.+. ++||... .+ .+++++||||||++++.. .|..+++.|.+.|+|+++|+||||.|..
T Consensus 1336 ~~~~~~~~l~~~~~~v~~~~-~~~~i~~~~~G~~~~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~~ 1413 (1655)
T PLN02980 1336 VRTFKEEQVRTYELRVDVDG-FSCLIKVHEVGQNAEGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSKI 1413 (1655)
T ss_pred HHHhccCCCceEEEEEccCc-eEEEEEEEecCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCC
Confidence 34555667777766665443 4554321 12 224679999999999986 6999999999889999999999999964
Q ss_pred CC--------CCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc
Q 021229 93 TR--------PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164 (315)
Q Consensus 93 ~~--------~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (315)
.. ..++...+++++.+++++++.++++|+||||||.+|+.++.++|++|+++|++++......... .....
T Consensus 1414 ~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~ 1492 (1655)
T PLN02980 1414 QNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRS 1492 (1655)
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHh
Confidence 32 1344556788899999999999999999999999999999999999999999976543322110 00000
Q ss_pred ccchhhhhhhccCCCchHHHHHHHhhhccCCCCC-C-CCcchhHHHHH-HHHHHHHHHHHHhhhccC---cccccccccc
Q 021229 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLS-L-VPSCLLSDYID-AMCTEYLEEKRELVRAIP---KDRKISNIDK 238 (315)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 238 (315)
... ......+.... ...+....+ ....+. . ....+ ..... .+...........+..+. ..+....+.+
T Consensus 1493 ~~~-~~~~~~l~~~g---~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~ 1566 (1655)
T PLN02980 1493 AKD-DSRARMLIDHG---LEIFLENWY-SGELWKSLRNHPHF-NKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQ 1566 (1655)
T ss_pred hhh-hHHHHHHHhhh---HHHHHHHhc-cHHHhhhhccCHHH-HHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhh
Confidence 000 00000000000 001111111 000000 0 00000 11111 010111111111111111 1123356789
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcCC-----------CcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCCC
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGD-----------NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~-----------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
+++|+|+|+|++|.+++ +.++.+.+.++. .++++++++|||++++|+|++|++.|.+||.+..+.+
T Consensus 1567 I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~ 1643 (1655)
T PLN02980 1567 CDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSS 1643 (1655)
T ss_pred CCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccC
Confidence 99999999999999885 566777776632 1589999999999999999999999999999765443
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=216.83 Aligned_cols=256 Identities=14% Similarity=0.138 Sum_probs=157.6
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCCCC------CCch
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTRPE------RSES 100 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~------~~~~ 100 (315)
+....+|..++|+...+. ..+++|||+||++.+.. .|..+...+ ..+|+|+++|+||||.|...... .+..
T Consensus 34 ~~~~~~g~~l~~~~~~~~-~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRAP-HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred EEEcCCCCEEEEEEccCC-CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 344457888999875432 34568999999988775 477777655 45699999999999999643211 2445
Q ss_pred hHHHHHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc-
Q 021229 101 FQAECVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL- 175 (315)
Q Consensus 101 ~~a~~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (315)
.+++++.++++.+ +..+++|+||||||.+++.++.++|++++++|++++..........................
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIR 191 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCC
Confidence 5678888888776 66899999999999999999999999999999987654321100000000000000000000
Q ss_pred ----------c---------CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccc
Q 021229 176 ----------V---------PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI 236 (315)
Q Consensus 176 ----------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (315)
. ....+....... .+...+.. ....... .+. ...+.. .......+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~-----------~~~~~~--~~~~~~~~ 255 (330)
T PRK10749 192 DGYAIGTGRWRPLPFAINVLTHSRERYRRNLR-FYADDPEL-RVGGPTY-HWV-----------RESILA--GEQVLAGA 255 (330)
T ss_pred CcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHH-HHHhCCCc-ccCCCcH-HHH-----------HHHHHH--HHHHHhhc
Confidence 0 000000000000 00000000 0000000 000 000000 00012345
Q ss_pred ccCCCCeEEEEeCCCCCCchHHHHHHHhhcC------CCcEEEEEcCCCCccccCCh---HHHHHHHHHHHhcC
Q 021229 237 DKITQPTLILWGEHDQIFPLELGRRLKSHLG------DNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLDS 301 (315)
Q Consensus 237 ~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~------~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 301 (315)
.++++|+|+|+|++|++++++.++.+++.++ ++++++++++|||.++.|.+ +++.+.|.+||++.
T Consensus 256 ~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 256 GDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred cCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 7789999999999999999999888887652 34689999999999999886 67889999999754
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-29 Score=213.22 Aligned_cols=261 Identities=19% Similarity=0.228 Sum_probs=156.1
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC---CCCchhHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP---ERSESFQA 103 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~---~~~~~~~a 103 (315)
+++++ |.++.|.... +.+.+++|||+||++++....|..+...+.+ +|+|+++|+||||.|..+.. ..+....+
T Consensus 6 ~~~~~-~~~~~~~~~~-~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITVD-GGYHLFTKTG-GEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecCC-CCeEEEEecc-CCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 34454 4455555442 2334679999999765543346666666665 59999999999999975422 24566678
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh-hhhhhc-ccc-hhhhhhhcc---C
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-RDRMFK-VSD-LEEASKILV---P 177 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~---~ 177 (315)
+++.+++++++.++++|+||||||.+++.++.++|++++++|++++......... ...... ... ......... .
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGD 163 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccC
Confidence 8899999999999999999999999999999999999999998865432211100 000000 000 000000000 0
Q ss_pred CCchHHHHHHHhhhc---cCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh---------ccCccccccccccCCCCeEE
Q 021229 178 QSPGKLKELMRYTFF---KRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR---------AIPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~i~~P~lv 245 (315)
............... .... ..+. ......... .......+. .+...+....+.++++|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 164 YDNPEYQEAVEVFYHHLLCRTR--KWPE-ALKHLKSGM----NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred cchHHHHHHHHHHHHHhhcccc--cchH-HHHHHhhcc----CHHHHhcccCCccccccccccccCHHHHhhccCCCEEE
Confidence 000000111110000 0000 0000 000000000 000000000 00011122345688999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
++|++|.+ +++..+.+.+.+ +++++++++++||++++|+|+++++.|.+||+
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999985 567788888888 68899999999999999999999999999984
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=207.22 Aligned_cols=244 Identities=22% Similarity=0.335 Sum_probs=150.1
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCchhHHHH-HHHHHHHcCCCceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSESFQAEC-VMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~a~~-~~~~l~~l~~~~v~lvGhSm 125 (315)
+|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|..+. ...+....+++ +..+++.++.++++|+||||
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 368999999998886 699999999988999999999999996542 22334445666 67777888889999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH-HHHhhhccCCCCCCCCcch
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE-LMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 204 (315)
||.+++.+|.++|++|++++++++............... ........+.......+.. ......+.... ..+...
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 155 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQ--NDEQLAQRFEQEGLEAFLDDWYQQPLFASQK--NLPPEQ 155 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhh--cchhhhhHHHhcCccHHHHHHhcCceeeecc--cCChHH
Confidence 999999999999999999999876543322110000000 0000000000000000100 00000000000 011111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcc---CccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAI---PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
...+...............+... ........+.++++|+++|+|++|..++ +..+.+.+.. +++++++++++||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~ 233 (251)
T TIGR03695 156 RQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHN 233 (251)
T ss_pred hHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCC
Confidence 11111100000000000111100 0111223456789999999999998774 5667777777 68999999999999
Q ss_pred cccCChHHHHHHHHHHHh
Q 021229 282 FNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 282 ~~~e~p~~~~~~i~~fl~ 299 (315)
+++|+|+++++.|.+|++
T Consensus 234 ~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 234 IHLENPEAFAKILLAFLE 251 (251)
T ss_pred cCccChHHHHHHHHHHhC
Confidence 999999999999999984
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=217.94 Aligned_cols=246 Identities=22% Similarity=0.306 Sum_probs=159.0
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA 112 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~ 112 (315)
++..++|+.. +.+++++|||+||++++.. .|..+.+.|...|+|+++|+||||.|.......+....++++.++++.
T Consensus 117 ~~~~i~~~~~--g~~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 193 (371)
T PRK14875 117 GGRTVRYLRL--GEGDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA 193 (371)
T ss_pred cCcEEEEecc--cCCCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 3556777654 3345689999999999886 699999999888999999999999996544445566678889999999
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch--hhhhhhhcccchhhhhhhccCCCchHHHHHHHhh
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ--DLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT 190 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
++.++++|+||||||.+++.+|.++|+++.++|++++....... ....... .......+...+...
T Consensus 194 ~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 194 LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFV------------AAESRRELKPVLELL 261 (371)
T ss_pred cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhh------------cccchhHHHHHHHHH
Confidence 99999999999999999999999999999999998754322110 0000000 000011111111111
Q ss_pred hccCCCCCCCCcchhHHHHHHHH----HHHHHHH-HHhhhc-cCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 191 FFKRPPLSLVPSCLLSDYIDAMC----TEYLEEK-RELVRA-IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~-~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
+..... .............. ....... ...+.. .........+.++++|+|+|+|++|.++|.+.++.+
T Consensus 262 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l-- 336 (371)
T PRK14875 262 FADPAL---VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL-- 336 (371)
T ss_pred hcChhh---CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc--
Confidence 111000 00011111100000 0000000 000110 001112234567899999999999999998766543
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
..+.++.+++++||++++|+|+++++.|.+||++
T Consensus 337 --~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 337 --PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred --cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 2468999999999999999999999999999974
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=190.06 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=171.0
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc--ceEEeecCCCCCCCCCCCCCCCchh-
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY--FNVYVPDLLFFGDSFTTRPERSESF- 101 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~~~~- 101 (315)
.+..+.+ ||++++|.... .+ ...|++++|.-++....|.+++..+.+. ++|+++|.||+|.|..+.......+
T Consensus 22 te~kv~v-ng~ql~y~~~G--~G-~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff 97 (277)
T KOG2984|consen 22 TESKVHV-NGTQLGYCKYG--HG-PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFF 97 (277)
T ss_pred hhheeee-cCceeeeeecC--CC-CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHH
Confidence 3344555 68999999863 33 2379999997776656788888777553 8999999999999976544433322
Q ss_pred --HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 102 --QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 102 --~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
.++....+|++|..+++.++|||=||..|+..|+++++.|.++|+..++...+..+. .. ...++++.. +.+..
T Consensus 98 ~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~-ma---~kgiRdv~k-Ws~r~ 172 (277)
T KOG2984|consen 98 MKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGA-MA---FKGIRDVNK-WSARG 172 (277)
T ss_pred HHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhH-HH---HhchHHHhh-hhhhh
Confidence 377788999999999999999999999999999999999999999877665443210 00 111111110 00000
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccc-cccccccCCCCeEEEEeCCCCCCchHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDR-KISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
.+.+.+. | -++.+...+. ..... ...+..+..++ .+..+++++||+|+++|++|++++...
T Consensus 173 R~P~e~~-----Y-------g~e~f~~~wa-----~wvD~-v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~h 234 (277)
T KOG2984|consen 173 RQPYEDH-----Y-------GPETFRTQWA-----AWVDV-VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPH 234 (277)
T ss_pred cchHHHh-----c-------CHHHHHHHHH-----HHHHH-HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCC
Confidence 0000000 0 0111111110 00111 11112222222 456789999999999999999999999
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 259 ~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
...+.... +.+++++.|+++|.+++..+++|++.+.+||++.
T Consensus 235 v~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 235 VCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 98888887 7899999999999999999999999999999863
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=205.91 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=96.6
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCCC--CCCchh
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTRP--ERSESF 101 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~--~~~~~~ 101 (315)
.+.++...+|.+++|... +++++++|||+||++++... + .+...+ .+.|+|+++|+||||.|..... ..+...
T Consensus 5 ~~~~~~~~~~~~l~y~~~--g~~~~~~lvllHG~~~~~~~-~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQS--GNPDGKPVVFLHGGPGSGTD-P-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred cCCeEEcCCCcEEEEEEC--cCCCCCEEEEECCCCCCCCC-H-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 345778888999999875 33346789999998776532 3 333344 3569999999999999975432 234445
Q ss_pred HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 102 ~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
.++++..+++++++++++++||||||.+++.++.++|++|+++|++++..
T Consensus 81 ~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 81 LVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 68889999999999999999999999999999999999999999987654
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=211.85 Aligned_cols=265 Identities=18% Similarity=0.172 Sum_probs=154.0
Q ss_pred eeeeeeecCCCceEEE-EEec---CCCCCCCcEEEEccCCCChhhhH-HhhHh-hccccceEEeecCCCCCCCCCCCCCC
Q 021229 24 FRSSVTDLQDGSVMHC-WVPK---TRNDSKPDLVLIHGLGANALWQW-TNIIP-HMIHYFNVYVPDLLFFGDSFTTRPER 97 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~-~~~~---~~~~~~~~vvllHG~~~~~~~~w-~~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~ 97 (315)
++...+.+.||..+.+ |... ..+.++|+||++||+++++...| ..++. .+..+|+|+++|+||||.|....+..
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~ 150 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF 150 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE
Confidence 4445677888888775 4321 12345678999999976542123 34444 44667999999999999996543332
Q ss_pred CchhHHHHHHHHHHHcCC----CceEEEEEchhHHHHHHHHHhhhhh--hceeEEeeCCCccCc--hhhhhhhhcccchh
Q 021229 98 SESFQAECVMRVMEAHSV----KKLSLVGLSYGGFVGYSMAAQFKEK--IEKVVICCSGVCLEE--QDLRDRMFKVSDLE 169 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~----~~v~lvGhSmGG~ia~~~a~~~p~~--v~~lil~~~~~~~~~--~~~~~~~~~~~~~~ 169 (315)
......+++.++++.+.. .+++++||||||.+++.++.++|++ |.++++++++..... ..+...... ...
T Consensus 151 ~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~--~y~ 228 (388)
T PLN02511 151 YSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNN--VYD 228 (388)
T ss_pred EcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHH--HHH
Confidence 223346677777777654 6899999999999999999999987 888888766543210 000000000 000
Q ss_pred hhhhhccCCCchHHHHHHHh---hhccCCCCC----CCCcchhHHHHHHHHHHH--HHHHHHhhhccCccccccccccCC
Q 021229 170 EASKILVPQSPGKLKELMRY---TFFKRPPLS----LVPSCLLSDYIDAMCTEY--LEEKRELVRAIPKDRKISNIDKIT 240 (315)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i~ 240 (315)
... ...+.+.... .+....... ........++.+.+.... .......+ ........+.+|+
T Consensus 229 ~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy---~~~s~~~~L~~I~ 298 (388)
T PLN02511 229 KAL-------AKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYY---SNSSSSDSIKHVR 298 (388)
T ss_pred HHH-------HHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHH---HHcCchhhhccCC
Confidence 000 0000111100 000000000 000000111111000000 00000000 0111234678899
Q ss_pred CCeEEEEeCCCCCCchHHH-HHHHhhcCCCcEEEEEcCCCCccccCChHH------HHHHHHHHHhcC
Q 021229 241 QPTLILWGEHDQIFPLELG-RRLKSHLGDNAQLIVIKKAGHAFNYEKPKE------FYKHLKSFLLDS 301 (315)
Q Consensus 241 ~P~lvi~G~~D~~~~~~~~-~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~~ 301 (315)
+|+|+|+|++|+++|.+.. +.+.+.. +++++++++++||..++|+|+. +++.|.+||+..
T Consensus 299 vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 299 VPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred CCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 9999999999999998754 3455556 7899999999999999999976 589999998644
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=219.24 Aligned_cols=260 Identities=16% Similarity=0.163 Sum_probs=155.3
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCchhHHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSESFQAECVMRV 109 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~a~~~~~~ 109 (315)
.+|..++|+.. +++++|+|||+||++++.. .|.++++.|.++|+|+++|+||||.|+... ..++...+++++.++
T Consensus 10 ~~g~~l~~~~~--g~~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~ 86 (582)
T PRK05855 10 SDGVRLAVYEW--GDPDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAV 86 (582)
T ss_pred eCCEEEEEEEc--CCCCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHH
Confidence 46888898875 3345789999999998885 699999999888999999999999997543 245667789999999
Q ss_pred HHHcCCCc-eEEEEEchhHHHHHHHHHh--hhhhhceeEEeeCCCccCchhhhhhhh---cccchhhhhhhcc-------
Q 021229 110 MEAHSVKK-LSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCSGVCLEEQDLRDRMF---KVSDLEEASKILV------- 176 (315)
Q Consensus 110 l~~l~~~~-v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------- 176 (315)
+++++.++ ++|+||||||.+++.++.+ .|+++..++.++++............. .............
T Consensus 87 i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (582)
T PRK05855 87 IDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYL 166 (582)
T ss_pred HHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHH
Confidence 99998766 9999999999999988876 345555555443321100000000000 0000000000000
Q ss_pred ---CCCchH-----HHHHHHhhhccCCCCCCCCcchhHHHHHHH-HHHHHHHHHHhhhccCccccccccccCCCCeEEEE
Q 021229 177 ---PQSPGK-----LKELMRYTFFKRPPLSLVPSCLLSDYIDAM-CTEYLEEKRELVRAIPKDRKISNIDKITQPTLILW 247 (315)
Q Consensus 177 ---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~ 247 (315)
+..+.. ..+.+...+ .... ......+.... .......................+..+++|+|+|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 240 (582)
T PRK05855 167 FHLPVLPELLWRLGLGRAWPRLL-RRVE-----GTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIV 240 (582)
T ss_pred HhCCCCcHHHhccchhhHHHHhh-hhcc-----CCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEE
Confidence 000000 000000000 0000 00000000000 00000000000000000001122456899999999
Q ss_pred eCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 248 GEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 248 G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
|++|+++|.+..+.+.+.+ ++.++++++ +||+++.|+|+++++.|.+|+.+..
T Consensus 241 G~~D~~v~~~~~~~~~~~~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 241 PTGDPYVRPALYDDLSRWV-PRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eCCCcccCHHHhccccccC-CcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999999999999888877 578888875 7999999999999999999998654
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-25 Score=199.73 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=151.9
Q ss_pred CCCceEEEEEecCC-CCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC-CCCchhHHHHHHH
Q 021229 32 QDGSVMHCWVPKTR-NDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP-ERSESFQAECVMR 108 (315)
Q Consensus 32 ~~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~ 108 (315)
+++..++++...+. ...+++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.... ..+...+.+++.+
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~ 196 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEA 196 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 45556665544332 234568999999998875 58999999864 69999999999999975432 2234455677777
Q ss_pred HHHHcC----CCceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc-
Q 021229 109 VMEAHS----VKKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP- 180 (315)
Q Consensus 109 ~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 180 (315)
+++.+. ..+++|+||||||.+++.++. +|+ +++++|+.++.............. ........+...
T Consensus 197 ~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~-----~~l~~~~~p~~~~ 270 (395)
T PLN02652 197 FLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAV-----APIFSLVAPRFQF 270 (395)
T ss_pred HHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHH-----HHHHHHhCCCCcc
Confidence 777664 247999999999999998764 564 799999987654322110000000 000000000000
Q ss_pred ----------hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 181 ----------GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 181 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
..-.......+..+... .......... ..++.. ......+.++++|+|+++|++
T Consensus 271 ~~~~~~~~~~s~~~~~~~~~~~dp~~~---~g~i~~~~~~-----------~~~~~~--~~l~~~L~~I~vPvLIi~G~~ 334 (395)
T PLN02652 271 KGANKRGIPVSRDPAALLAKYSDPLVY---TGPIRVRTGH-----------EILRIS--SYLTRNFKSVTVPFMVLHGTA 334 (395)
T ss_pred cCcccccCCcCCCHHHHHHHhcCCCcc---cCCchHHHHH-----------HHHHHH--HHHHhhcccCCCCEEEEEeCC
Confidence 00000000000000000 0000000000 000000 001234678899999999999
Q ss_pred CCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccC-ChHHHHHHHHHHHhcCC
Q 021229 251 DQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYE-KPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 302 (315)
|.++|++.++.+++.+. ++.+++++++++|.++.| +++++.+.|.+||....
T Consensus 335 D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 335 DRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 99999999999988753 357899999999999777 78999999999998654
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=196.38 Aligned_cols=265 Identities=14% Similarity=0.130 Sum_probs=159.4
Q ss_pred ceEEEEEecCCC-CCCCcEEEEccCCCCh-------------hhhHHhhHhh---cc-ccceEEeecCCCCCCCCCC---
Q 021229 35 SVMHCWVPKTRN-DSKPDLVLIHGLGANA-------------LWQWTNIIPH---MI-HYFNVYVPDLLFFGDSFTT--- 93 (315)
Q Consensus 35 ~~~~~~~~~~~~-~~~~~vvllHG~~~~~-------------~~~w~~~~~~---l~-~~~~vi~~D~~G~G~S~~~--- 93 (315)
.+++|.....-+ .+...||++|++++++ .| |..++-. +. .+|.||++|..|-|.|+++
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gw-w~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGY-WDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCccc-HHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 467777654322 2345788889997753 23 7666532 32 3599999999987653211
Q ss_pred ------------------CCCCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccC
Q 021229 94 ------------------RPERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE 154 (315)
Q Consensus 94 ------------------~~~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~ 154 (315)
.|..+..++++++.++++++++++++ |+||||||++|+++|.++|++|+++|++++.....
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 12355667789999999999999997 99999999999999999999999999998765443
Q ss_pred chh---hhhhhhc-ccchhhhh-hhcc-CCCc----hHHHH----------HHHhhhccCCCCC------CCCcchhHHH
Q 021229 155 EQD---LRDRMFK-VSDLEEAS-KILV-PQSP----GKLKE----------LMRYTFFKRPPLS------LVPSCLLSDY 208 (315)
Q Consensus 155 ~~~---~~~~~~~-~~~~~~~~-~~~~-~~~~----~~~~~----------~~~~~~~~~~~~~------~~~~~~~~~~ 208 (315)
... ....... +....... .... ...+ ...+. .+...+.+..... .....-...|
T Consensus 200 ~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 200 AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 221 0000000 00000000 0000 0011 00111 1111111110000 0001112233
Q ss_pred HHHHHHHHH-----HHHHHhhhccCc-------cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEE
Q 021229 209 IDAMCTEYL-----EEKRELVRAIPK-------DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLI 273 (315)
Q Consensus 209 ~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~ 273 (315)
++....... .....+.+.+.. .+....+.++++|+|+|+|++|.++|++..+.+.+.++ ++++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 322211100 001111111111 12334577899999999999999999999999988884 368999
Q ss_pred EEcC-CCCccccCChHHHHHHHHHHHhc
Q 021229 274 VIKK-AGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 274 ~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++++ +||.+++|+|+++++.|.+||++
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9985 99999999999999999999975
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-25 Score=188.94 Aligned_cols=259 Identities=21% Similarity=0.271 Sum_probs=158.9
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCC-CCC-CCCCchhHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSF-TTR-PERSESFQA 103 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~-~~~-~~~~~~~~a 103 (315)
.+....||..+.|+..........+||++||++.+.. .|..++..|.. +|.|+++|+||||.|. ... .......+.
T Consensus 12 ~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~-ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~ 90 (298)
T COG2267 12 GYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSG-RYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYV 90 (298)
T ss_pred ceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHH
Confidence 3455567887777765433333368999999999886 58888887765 5999999999999996 222 222345567
Q ss_pred HHHHHHHHHcC----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC-
Q 021229 104 ECVMRVMEAHS----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ- 178 (315)
Q Consensus 104 ~~~~~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 178 (315)
+++.++++... ..+++|+||||||.|++.++.+++.++.++||.++................. ......+.+.
T Consensus 91 ~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~--~~~~~~~~p~~ 168 (298)
T COG2267 91 DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLA--LKLLGRIRPKL 168 (298)
T ss_pred HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHh--ccccccccccc
Confidence 77777777664 4689999999999999999999999999999987766544200000000000 0000000000
Q ss_pred --Cc--------hHH---HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEE
Q 021229 179 --SP--------GKL---KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 179 --~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 245 (315)
.. ..+ .+.. ..+...+.... ......++... ..... .........+++|+|+
T Consensus 169 ~~~~~~~~~~~~~~~sr~~~~~-~~~~~dP~~~~--~~~~~~w~~~~-----------~~a~~-~~~~~~~~~~~~PvLl 233 (298)
T COG2267 169 PVDSNLLEGVLTDDLSRDPAEV-AAYEADPLIGV--GGPVSRWVDLA-----------LLAGR-VPALRDAPAIALPVLL 233 (298)
T ss_pred ccCcccccCcCcchhhcCHHHH-HHHhcCCcccc--CCccHHHHHHH-----------HHhhc-ccchhccccccCCEEE
Confidence 00 000 0000 00001100000 00000010000 00000 1122335678999999
Q ss_pred EEeCCCCCCc-hHHHHHHHhhcC-CCcEEEEEcCCCCccccCCh---HHHHHHHHHHHhcCCC
Q 021229 246 LWGEHDQIFP-LELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLDSQP 303 (315)
Q Consensus 246 i~G~~D~~~~-~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~~~ 303 (315)
++|++|++++ .+.+.++.+..+ +++++++++|+.|.++.|.+ +++.+.+.+|+.+...
T Consensus 234 l~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 234 LQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred EecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999999 676666666554 56799999999999988764 6888999999986554
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=178.95 Aligned_cols=260 Identities=18% Similarity=0.211 Sum_probs=159.9
Q ss_pred eeeeeeecCCCceEEEEEecC--CCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCC-Cc
Q 021229 24 FRSSVTDLQDGSVMHCWVPKT--RNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPER-SE 99 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~--~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~-~~ 99 (315)
..+..+...+|..+.+....+ +...+..|+++||+|....+.+......|+. +|.|+++|++|||.|+...... +.
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 344566777887777644322 2234457899999999876677777777765 5999999999999998654332 23
Q ss_pred hhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhh
Q 021229 100 SFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASK 173 (315)
Q Consensus 100 ~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (315)
+..++++..+.+.. ...+..|+||||||+|++.++.++|+...++|++++.....+......... .+.....
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~--~~l~~l~ 184 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVI--SILTLLS 184 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHH--HHHHHHH
Confidence 44577777766642 234688999999999999999999999999999865433221110000000 0000011
Q ss_pred hccCCCc----h-----HHHHHH-HhhhccCCC-CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC
Q 021229 174 ILVPQSP----G-----KLKELM-RYTFFKRPP-LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP 242 (315)
Q Consensus 174 ~~~~~~~----~-----~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 242 (315)
.+.|.+. . ..++.. +.....++. +..-+. .....++++. ..+....+.++++|
T Consensus 185 ~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pR--------------l~T~~ElLr~--~~~le~~l~~vtvP 248 (313)
T KOG1455|consen 185 KLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPR--------------LKTAYELLRV--TADLEKNLNEVTVP 248 (313)
T ss_pred HhCCceeecCCccccccccCCHHHHHHhhcCCceecCCcc--------------HHHHHHHHHH--HHHHHHhccccccc
Confidence 1111110 0 000000 000011100 000000 0011111111 00123457789999
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCcccc-CC---hHHHHHHHHHHHhcC
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNY-EK---PKEFYKHLKSFLLDS 301 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~-e~---p~~~~~~i~~fl~~~ 301 (315)
.+++||+.|.++.++.++.+++... .+.++.++||.-|.... |- -+.+...|.+||.+.
T Consensus 249 flilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 249 FLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999999999999998764 57899999999998886 33 356778888998754
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=187.29 Aligned_cols=236 Identities=13% Similarity=0.107 Sum_probs=145.5
Q ss_pred eeeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 27 SVTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
.++...+|.++..+...+ .++..|.||++||+++.....|..+.+.|.+ +|.|+++|+||||.|.............+
T Consensus 171 v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~ 250 (414)
T PRK05077 171 LEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQ 250 (414)
T ss_pred EEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHH
Confidence 344445775666655332 2334555565566655432347777777765 49999999999999964321122222344
Q ss_pred HHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 105 CVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 105 ~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
.+.+++... +.+++.++||||||.+|+.+|..+|++++++|++++........ ..... ..+.
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~-~~~~~--------------~~p~ 315 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD-PKRQQ--------------QVPE 315 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc-hhhhh--------------hchH
Confidence 566666655 56889999999999999999999999999999886654210000 00000 0000
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccc-ccCCCCeEEEEeCCCCCCchHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI-DKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
.....+...+. . +......+... +..+... ....+ .++++|+|+|+|++|+++|.+.++
T Consensus 316 ~~~~~la~~lg-~------~~~~~~~l~~~------------l~~~sl~-~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~ 375 (414)
T PRK05077 316 MYLDVLASRLG-M------HDASDEALRVE------------LNRYSLK-VQGLLGRRCPTPMLSGYWKNDPFSPEEDSR 375 (414)
T ss_pred HHHHHHHHHhC-C------CCCChHHHHHH------------hhhccch-hhhhhccCCCCcEEEEecCCCCCCCHHHHH
Confidence 01111111110 0 00000111000 0000000 00011 568999999999999999999999
Q ss_pred HHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 261 RLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 261 ~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+.+.. +++++++++++ ++.+.++++++.|.+||++.
T Consensus 376 ~l~~~~-~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 376 LIASSS-ADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred HHHHhC-CCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 988887 68999999986 66789999999999999764
|
|
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=175.70 Aligned_cols=241 Identities=21% Similarity=0.303 Sum_probs=155.1
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcccc--ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC----CCceE
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHY--FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS----VKKLS 119 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~----~~~v~ 119 (315)
....|+++++||+-++.. .|..+...|++. ..|++.|.|.||.|..... .+...+++++..+++..+ ..+++
T Consensus 49 ~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred cCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCce
Confidence 446789999999988885 799999888875 7899999999999965433 335567999999999884 57899
Q ss_pred EEEEchhH-HHHHHHHHhhhhhhceeEEeeCCCccCchh------hhhhhhccc-------chhhhhhhccCCCc-hHHH
Q 021229 120 LVGLSYGG-FVGYSMAAQFKEKIEKVVICCSGVCLEEQD------LRDRMFKVS-------DLEEASKILVPQSP-GKLK 184 (315)
Q Consensus 120 lvGhSmGG-~ia~~~a~~~p~~v~~lil~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~ 184 (315)
|+|||||| .+++..+...|+.+.++|+++..+...... ....+.... ...++...+..... ..+.
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 99999999 888888889999999999987544211110 000100000 00000000000000 0011
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc--cCccc-cccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA--IPKDR-KISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
.++...+.+... ...+... .......+++.. ..... ...+ .....|||++.|.++..++.+.-..
T Consensus 207 ~fi~~nl~~~~~----~~s~~w~-------~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 207 QFILTNLKKSPS----DGSFLWR-------VNLDSIASLLDEYEILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred HHHHHhcCcCCC----CCceEEE-------eCHHHHHHHHHHHHhhcccccccc-cccccceeEEecCCCCCcChhHHHH
Confidence 111111110000 0000000 000011111111 01111 2223 5678999999999999999998899
Q ss_pred HHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 262 LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 262 l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.+.+ ++++++++++|||+++.|+|++|++.|.+|++..
T Consensus 275 ~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99888 7899999999999999999999999999999764
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=164.38 Aligned_cols=221 Identities=19% Similarity=0.329 Sum_probs=145.2
Q ss_pred CcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchh---HHHHHHHHHHHcCCCceEEEEEch
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESF---QAECVMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~---~a~~~~~~l~~l~~~~v~lvGhSm 125 (315)
..|||||||.++.. ..+.+...|.++ |+|++|.+||||.....--..+..+ .+.+..+.|...+.+.|.++|.||
T Consensus 16 ~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSm 94 (243)
T COG1647 16 RAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSM 94 (243)
T ss_pred EEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecc
Confidence 68999999988875 577888888754 9999999999997742212222222 245555666667889999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcch
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (315)
||.+++.+|.++| ++++|.++++....... +........ +..........+.+.+.+.. +... +...
T Consensus 95 GGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~---~~~kk~e~k~~e~~~~e~~~-~~~~------~~~~ 162 (243)
T COG1647 95 GGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYF---RNAKKYEGKDQEQIDKEMKS-YKDT------PMTT 162 (243)
T ss_pred hhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHH---HHhhhccCCCHHHHHHHHHH-hhcc------hHHH
Confidence 9999999999998 89999988776432211 111111100 01111111112222211111 0000 0000
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFN 283 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~ 283 (315)
..+...++. +....+..|..|++++.|++|.++|.+.+..+..++. ...++.+++++||.+.
T Consensus 163 ------------~~~~~~~i~-----~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt 225 (243)
T COG1647 163 ------------TAQLKKLIK-----DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVIT 225 (243)
T ss_pred ------------HHHHHHHHH-----HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceee
Confidence 011111111 1234567899999999999999999999999998875 3579999999999987
Q ss_pred cCC-hHHHHHHHHHHHhc
Q 021229 284 YEK-PKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e~-p~~~~~~i~~fl~~ 300 (315)
.+. .+.+.+.|..||++
T Consensus 226 ~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 226 LDKERDQVEEDVITFLEK 243 (243)
T ss_pred cchhHHHHHHHHHHHhhC
Confidence 754 68999999999973
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.91 E-value=7e-23 Score=180.00 Aligned_cols=250 Identities=16% Similarity=0.179 Sum_probs=144.1
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhH-------------------------HhhHhhccc-cceEEeecCC
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQW-------------------------TNIIPHMIH-YFNVYVPDLL 85 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w-------------------------~~~~~~l~~-~~~vi~~D~~ 85 (315)
.+|..++++...+. ..+.+|+++||++.+..+.+ ..+++.|.+ +|+|+++|+|
T Consensus 5 ~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 5 KDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 47777777654332 23458999999998874221 234677754 6999999999
Q ss_pred CCCCCCCCC--CC--CCchhHHHHHHHHHHHcC------------------------CCceEEEEEchhHHHHHHHHHhh
Q 021229 86 FFGDSFTTR--PE--RSESFQAECVMRVMEAHS------------------------VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 86 G~G~S~~~~--~~--~~~~~~a~~~~~~l~~l~------------------------~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
|||.|.... .. .....+++++.++++... ..+++|+||||||.|++.++.++
T Consensus 84 GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~ 163 (332)
T TIGR01607 84 GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELL 163 (332)
T ss_pred ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHh
Confidence 999997432 11 234456777777776531 24799999999999999998876
Q ss_pred hh--------hhceeEEeeCCCccCchh-----hhhhhhcccchhhhhhhccCC----CchHHH--HHHHhhhccCCCCC
Q 021229 138 KE--------KIEKVVICCSGVCLEEQD-----LRDRMFKVSDLEEASKILVPQ----SPGKLK--ELMRYTFFKRPPLS 198 (315)
Q Consensus 138 p~--------~v~~lil~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~ 198 (315)
++ .++++|++++........ ..... ...+......+.+. ....+. ......+...+..
T Consensus 164 ~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~--~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~- 240 (332)
T TIGR01607 164 GKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYF--YLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFR- 240 (332)
T ss_pred ccccccccccccceEEEeccceEEecccCCCcchhhhh--HHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccc-
Confidence 53 478888776554221100 00000 00000000000000 000000 0000000011000
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC--CCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEE
Q 021229 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI--TQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVI 275 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i 275 (315)
........+...+... ... ....+.++ ++|+|+|+|++|.+++++.++.+.+... ++.+++++
T Consensus 241 -~~~~~s~~~~~~l~~~--------~~~-----~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~ 306 (332)
T TIGR01607 241 -YDGGITFNLASELIKA--------TDT-----LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTL 306 (332)
T ss_pred -cCCcccHHHHHHHHHH--------HHH-----HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEE
Confidence 0000001111111110 000 01123344 7899999999999999999988876653 46899999
Q ss_pred cCCCCccccCC-hHHHHHHHHHHHh
Q 021229 276 KKAGHAFNYEK-PKEFYKHLKSFLL 299 (315)
Q Consensus 276 ~~~gH~~~~e~-p~~~~~~i~~fl~ 299 (315)
++++|.++.|. ++++.+.|.+||.
T Consensus 307 ~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 307 EDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999999986 6899999999986
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-24 Score=180.07 Aligned_cols=215 Identities=25% Similarity=0.302 Sum_probs=128.1
Q ss_pred ceEEeecCCCCCCCCC---C-CCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 77 FNVYVPDLLFFGDSFT---T-RPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 77 ~~vi~~D~~G~G~S~~---~-~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
|+|+++|+||+|.|+. . .+.++....++++..+++.++.++++++||||||.+++.+|.++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999984 2 35556677889999999999999999999999999999999999999999999876420
Q ss_pred ----cCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH-hhhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHH----
Q 021229 153 ----LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR-YTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRE---- 222 (315)
Q Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 222 (315)
.................................... ........ ................ .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREF---VEDFLKQFQSQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCcc---ccchhhccchhhhhHHHHHHHHhhhccc
Confidence 000000000000000000000000000000000000 00000000 0000000000000000 0000000
Q ss_pred hhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHH
Q 021229 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 223 ~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
.............+.++++|+++++|++|.++|++..+.+.+.+ ++.++++++++||+.++++|+++++.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00001111123345679999999999999999999999999988 6899999999999999999999999885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=171.10 Aligned_cols=230 Identities=15% Similarity=0.245 Sum_probs=143.2
Q ss_pred eeecCCCceEEEEEecCC---CCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCC-CCCCCCCCCCCchh-
Q 021229 28 VTDLQDGSVMHCWVPKTR---NDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFF-GDSFTTRPERSESF- 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~---~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~-G~S~~~~~~~~~~~- 101 (315)
.+.+.+|.++..|...+. ..+.++||+.||++.+.. .+..++..|.+ +|.|+.+|.+|| |+|+....+.+...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g 91 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG 91 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc
Confidence 467789999999887653 234578999999999875 47788888865 599999999988 99965432222222
Q ss_pred --HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 102 --QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 102 --~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
....+.++++..+.+++.|+||||||.+|+..|... .++.+|+.++...+.. .......
T Consensus 92 ~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d--~l~~~~~--------------- 152 (307)
T PRK13604 92 KNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRD--TLERALG--------------- 152 (307)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHH--HHHHhhh---------------
Confidence 233446666666778999999999999997777643 3788887665443221 0100000
Q ss_pred chHHHHHHHhhhccCCCCCCCCcch--------hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCC
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCL--------LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHD 251 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 251 (315)
..+. ..+....+..+ ...++....... .. ......+.+.+++.|+|+|||++|
T Consensus 153 ---------~~~~-~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~------~~---~~~s~i~~~~~l~~PvLiIHG~~D 213 (307)
T PRK13604 153 ---------YDYL-SLPIDELPEDLDFEGHNLGSEVFVTDCFKHG------WD---TLDSTINKMKGLDIPFIAFTANND 213 (307)
T ss_pred ---------cccc-cCcccccccccccccccccHHHHHHHHHhcC------cc---ccccHHHHHhhcCCCEEEEEcCCC
Confidence 0000 00000000000 011111100000 00 001122345668899999999999
Q ss_pred CCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 252 QIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+||.+.++.+.+.+. .++++++++|++|.+.. ++ -.+++|.++.
T Consensus 214 ~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~----~~~~~~~~~~ 259 (307)
T PRK13604 214 SWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE-NL----VVLRNFYQSV 259 (307)
T ss_pred CccCHHHHHHHHHHhccCCcEEEEeCCCccccCc-ch----HHHHHHHHHH
Confidence 9999999999998774 47999999999998874 23 2345565543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-23 Score=180.93 Aligned_cols=266 Identities=16% Similarity=0.167 Sum_probs=143.1
Q ss_pred eeeecCCCceEEE-EEec-CCCCCCCcEEEEccCCCChhh-hHHhhHhhccc-cceEEeecCCCCCCCCCCCCC-CCc--
Q 021229 27 SVTDLQDGSVMHC-WVPK-TRNDSKPDLVLIHGLGANALW-QWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE-RSE-- 99 (315)
Q Consensus 27 ~~~~~~~g~~~~~-~~~~-~~~~~~~~vvllHG~~~~~~~-~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~~~-- 99 (315)
..+.++||..+.+ |... ....++|+||++||++++... .+..++..|.+ +|+|+++|+||||.+....+. +..
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~ 113 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGE 113 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCc
Confidence 4577788876654 3321 122346799999999876321 24456666654 599999999999977432221 111
Q ss_pred -hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhh--hceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 100 -SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK--IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 100 -~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
.+....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++....... ..... ..........
T Consensus 114 ~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~--~~~~~--~~~~~~~~~l 189 (324)
T PRK10985 114 TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS--YRMEQ--GFSRVYQRYL 189 (324)
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH--HHHhh--hHHHHHHHHH
Confidence 11122222233446778899999999999988888887654 88888887765432110 00000 0000000000
Q ss_pred CCCchHHHHHHHh---hhccCCCCC--CC-CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 177 PQSPGKLKELMRY---TFFKRPPLS--LV-PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 177 ~~~~~~~~~~~~~---~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
...+.+.... .+....... .+ ....+.++-+.. ......................++++++|+++|+|++
T Consensus 190 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~-~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~ 265 (324)
T PRK10985 190 ---LNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLI-TARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKD 265 (324)
T ss_pred ---HHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhh-eeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCC
Confidence 0000000000 000000000 00 000001110000 0000000000000001112345678999999999999
Q ss_pred CCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCCh-----HHHHHHHHHHHhcC
Q 021229 251 DQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP-----KEFYKHLKSFLLDS 301 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~ 301 (315)
|++++.+..+.+.+.. ++.++++++++||+.++|-. -..-+.+.+|++..
T Consensus 266 D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 266 DPFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 9999998888776665 68899999999999998742 35567778888654
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=160.12 Aligned_cols=182 Identities=18% Similarity=0.220 Sum_probs=122.5
Q ss_pred CcEEEEccCCCChhhhHHh--hHhhccc---cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 50 PDLVLIHGLGANALWQWTN--IIPHMIH---YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~--~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
|+||||||++++.. .|.. +.+.+.+ +|+|+++|+||||. ..++.+.+++++++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~-----------~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYPA-----------DAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCHH-----------HHHHHHHHHHHHcCCCCeEEEEEC
Confidence 57999999998875 5763 3355543 69999999999852 357788999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc-
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC- 203 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 203 (315)
|||.+++.+|.++|. ++|+++++... ..... ...... .+... ....
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~--~~~~~------------------------~~~~~~-~~~~~---~~~~~ 116 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRP--FELLT------------------------DYLGEN-ENPYT---GQQYV 116 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCH--HHHHH------------------------HhcCCc-ccccC---CCcEE
Confidence 999999999999983 46777765421 00000 000000 00000 0001
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~ 283 (315)
+..++++.. .. . ....+. ..+|+++|+|++|+++|.+.+.++.+. ++.++++|++|..
T Consensus 117 ~~~~~~~d~--------~~-------~-~~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f- 174 (190)
T PRK11071 117 LESRHIYDL--------KV-------M-QIDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF- 174 (190)
T ss_pred EcHHHHHHH--------Hh-------c-CCccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch-
Confidence 111221111 00 0 111233 667889999999999999999988874 4677889999988
Q ss_pred cCChHHHHHHHHHHHh
Q 021229 284 YEKPKEFYKHLKSFLL 299 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~ 299 (315)
+..+++.+.+.+|+.
T Consensus 175 -~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 175 -VGFERYFNQIVDFLG 189 (190)
T ss_pred -hhHHHhHHHHHHHhc
Confidence 445889999999975
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-21 Score=167.78 Aligned_cols=247 Identities=14% Similarity=0.096 Sum_probs=133.2
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCCh---hhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANA---LWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~---~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~ 108 (315)
+|.++..+...+.+.++++||++||++... ...|..+.+.|++ +|+|+++|++|||.|.... .......+++.+
T Consensus 10 ~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~~~~~d~~~ 87 (274)
T TIGR03100 10 EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFEGIDADIAA 87 (274)
T ss_pred CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHHHHHHHHHH
Confidence 454444333323333456899898864311 1135667777765 5999999999999986432 222333455555
Q ss_pred HHHHc-----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 109 VMEAH-----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 109 ~l~~l-----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
+++.+ +.++++++||||||.+++.+|.. +.+|+++|++++............... ...... .....+
T Consensus 88 ~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~ 159 (274)
T TIGR03100 88 AIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRH-----YYLGQL--LSADFW 159 (274)
T ss_pred HHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHH-----HHHHHH--hChHHH
Confidence 55544 56789999999999999999765 468999999976532211100000000 000000 000000
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcc-CccccccccccCCCCeEEEEeCCCCCCchHH----
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI-PKDRKISNIDKITQPTLILWGEHDQIFPLEL---- 258 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~---- 258 (315)
..+ .... +........+......... ........ ...+....+.++++|+|+++|++|...+.-.
T Consensus 160 ~~~----~~g~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~ 229 (274)
T TIGR03100 160 RKL----LSGE----VNLGSSLRGLGDALLKARQ--KGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVL 229 (274)
T ss_pred HHh----cCCC----ccHHHHHHHHHHHHHhhhh--cCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhc
Confidence 000 0000 0000000111000000000 00000000 0000123455779999999999998864221
Q ss_pred -HHHHHhhcC-CCcEEEEEcCCCCccccCC-hHHHHHHHHHHHh
Q 021229 259 -GRRLKSHLG-DNAQLIVIKKAGHAFNYEK-PKEFYKHLKSFLL 299 (315)
Q Consensus 259 -~~~l~~~~~-~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 299 (315)
+..+.+.+. ++++++.++++||++..|. ++++.+.|.+||+
T Consensus 230 ~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 230 GEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred cChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 134444442 5789999999999995555 5999999999995
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=164.23 Aligned_cols=204 Identities=18% Similarity=0.270 Sum_probs=122.2
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCc-------hhHHHHHHHHHHH---c--
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSE-------SFQAECVMRVMEA---H-- 113 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~-------~~~a~~~~~~l~~---l-- 113 (315)
++.|+||++||++.+.. .|..+...|.+ +|+|+++|+||||.|....+.... ....+++.++++. .
T Consensus 25 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34689999999988875 58888888876 599999999999986432111111 0112333333332 2
Q ss_pred -CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhc
Q 021229 114 -SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFF 192 (315)
Q Consensus 114 -~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (315)
+.++++++||||||.+++.++.++|+....++++.++.. . ..... .+.
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~--~~~~~----------------------------~~~ 152 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-T--SLART----------------------------LFP 152 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-H--HHHHH----------------------------hcc
Confidence 357899999999999999999988864333444332210 0 00000 000
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC-CCCeEEEEeCCCCCCchHHHHHHHhhcCC---
Q 021229 193 KRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI-TQPTLILWGEHDQIFPLELGRRLKSHLGD--- 268 (315)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lvi~G~~D~~~~~~~~~~l~~~~~~--- 268 (315)
.... ..+. ..... ... +..+...+....+.++ ++|+|+|+|++|.++|++.++.+.+.+..
T Consensus 153 ~~~~--~~~~-~~~~~-~~~-----------~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 153 PLIP--ETAA-QQAEF-NNI-----------VAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred cccc--cccc-cHHHH-HHH-----------HHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 0000 0000 00000 000 0000001111234555 68999999999999999999999887632
Q ss_pred --CcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 269 --NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 269 --~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.++++++++||.+. + ...+.+.+||++.
T Consensus 218 ~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 257788999999864 3 4568888998753
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=171.60 Aligned_cols=273 Identities=16% Similarity=0.251 Sum_probs=149.0
Q ss_pred hcceeeeeeecCCC-ceEEEEEecCCCCCCCcEEEEccCCCChhhhH-----HhhHhhccc-cceEEeecCCCCCCCCCC
Q 021229 21 RLGFRSSVTDLQDG-SVMHCWVPKTRNDSKPDLVLIHGLGANALWQW-----TNIIPHMIH-YFNVYVPDLLFFGDSFTT 93 (315)
Q Consensus 21 ~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w-----~~~~~~l~~-~~~vi~~D~~G~G~S~~~ 93 (315)
..|..+..+...++ ..++.+.+..+...++|||++||+..+. +.| ..+++.|.+ +|+|+++|++|+|.|...
T Consensus 33 ~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~ 111 (350)
T TIGR01836 33 EVGVTPKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY 111 (350)
T ss_pred ccCCCCCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc
Confidence 44555544444433 3444443222223456899999975544 333 467777765 599999999999987532
Q ss_pred CCCCCchh-----HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccc
Q 021229 94 RPERSESF-----QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSD 167 (315)
Q Consensus 94 ~~~~~~~~-----~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~ 167 (315)
.+... ....+..+++..+.++++++||||||++++.++..+|++|+++|+++++....... ..........
T Consensus 112 ---~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~ 188 (350)
T TIGR01836 112 ---LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVD 188 (350)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccC
Confidence 12222 22334455566788999999999999999999999999999999998766543211 0000000000
Q ss_pred hhhhhhhccCCCchHHHHHHHhhhccCCCC----------CCCCcchhHHHHHHH--HHH----HHHHHH----Hhhhc-
Q 021229 168 LEEASKILVPQSPGKLKELMRYTFFKRPPL----------SLVPSCLLSDYIDAM--CTE----YLEEKR----ELVRA- 226 (315)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~----~~~~~~----~~~~~- 226 (315)
.......+.......+...+. +..+... ....+....++.... ... ...... .++..
T Consensus 189 ~~~~~~~~~~~p~~~~~~~f~--~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 189 IDLAVDTMGNIPGELLNLTFL--MLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred HHHHHHhcCCCCHHHHHHHHH--hcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 111110000000000000000 0000000 000000001110000 000 000000 11110
Q ss_pred -cCcc-----ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCCh---HHHHHHHHH
Q 021229 227 -IPKD-----RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKP---KEFYKHLKS 296 (315)
Q Consensus 227 -~~~~-----~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~ 296 (315)
+... .....+.++++|+++++|++|.++|++.++.+.+.++ ++.++++++ +||...+..+ +++...|.+
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~ 345 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGK 345 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHH
Confidence 1111 1123467899999999999999999999999988874 245677776 7998877654 789999999
Q ss_pred HHhc
Q 021229 297 FLLD 300 (315)
Q Consensus 297 fl~~ 300 (315)
||.+
T Consensus 346 wl~~ 349 (350)
T TIGR01836 346 WLQA 349 (350)
T ss_pred HHHh
Confidence 9874
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-21 Score=174.05 Aligned_cols=234 Identities=13% Similarity=0.145 Sum_probs=139.5
Q ss_pred CCCcEEEEccCCCChhhhHH-----hhHhhcc-ccceEEeecCCCCCCCCCCCC--CCCchhHHHHHHHHHHHcCCCceE
Q 021229 48 SKPDLVLIHGLGANALWQWT-----NIIPHMI-HYFNVYVPDLLFFGDSFTTRP--ERSESFQAECVMRVMEAHSVKKLS 119 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~-----~~~~~l~-~~~~vi~~D~~G~G~S~~~~~--~~~~~~~a~~~~~~l~~l~~~~v~ 119 (315)
.++|||++||+.... +.|+ .++..|. ++|+|+++|++|+|.|..... ++......+.+..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 568999999986554 4575 5777776 469999999999998864321 222233455677777778999999
Q ss_pred EEEEchhHHHHH----HHHHhh-hhhhceeEEeeCCCccCchhhhhhhhccc---chhhhhhhccCCCchHHHH------
Q 021229 120 LVGLSYGGFVGY----SMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVS---DLEEASKILVPQSPGKLKE------ 185 (315)
Q Consensus 120 lvGhSmGG~ia~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------ 185 (315)
++||||||.++. .+++.+ |++|++++++++...+............. .++.............+..
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 345555 78899999998877655332111111000 0111110000000011111
Q ss_pred --------HHHhhhccCCCC-----------CCCCcchhHHHHHHHHHHHHHHHHHhh-hccCccccccccccCCCCeEE
Q 021229 186 --------LMRYTFFKRPPL-----------SLVPSCLLSDYIDAMCTEYLEEKRELV-RAIPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 186 --------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lv 245 (315)
.+.......... ..+|..+..+++..++.+. .+. ..+........+.+|++|+++
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N-----~L~~G~~~v~g~~~dL~~I~vPvLv 420 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQN-----ALTTGGLEVCGVRLDLSKVKVPVYI 420 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcC-----CCcCCeeEECCEecchhhCCCCEEE
Confidence 111011111000 0011112222222111110 000 011111234567899999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChH
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPK 288 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~ 288 (315)
|+|++|.++|.+.++.+.+.+ ++.+..+++++||.+++++|.
T Consensus 421 V~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 421 IATREDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 999999999999999999888 578888999999999999885
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=158.63 Aligned_cols=245 Identities=27% Similarity=0.343 Sum_probs=139.3
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc---cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH---YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSm 125 (315)
+++|+++||++.+.. .|......+.. .|+++++|+||||.|. .. .......++++..+++.++..+++|+||||
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 97 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDALGLEKVVLVGHSM 97 (282)
T ss_pred CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 558999999998775 47663233322 2999999999999996 11 122223378899999999998999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh-hhcccchhhhhhhccCCC-chHHHHHHHhhh-ccC-CC-----
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR-MFKVSDLEEASKILVPQS-PGKLKELMRYTF-FKR-PP----- 196 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~----- 196 (315)
||.+++.++.++|+++++++++++............ ............ ..... ............ ... ..
T Consensus 98 Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (282)
T COG0596 98 GGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD-LLLGLDAAAFAALLAALGLLAALAAAARAG 176 (282)
T ss_pred cHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh-hhhccchhhhhhhhhcccccccccccchhc
Confidence 999999999999999999999986543110000000 000000000000 00000 000000000000 000 00
Q ss_pred -CCCCCcchhHHHHHHHHHHHHH-HHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCC-cEEE
Q 021229 197 -LSLVPSCLLSDYIDAMCTEYLE-EKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN-AQLI 273 (315)
Q Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~-~~~~ 273 (315)
............ ......... ....................+++|+++++|++|.+.|......+.+.+ ++ .+++
T Consensus 177 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~-~~~~~~~ 254 (282)
T COG0596 177 LAEALRAPLLGAA-AAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLV 254 (282)
T ss_pred cccccccccchhH-hhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC-CCCceEE
Confidence 000000000000 000000000 000000000000112345678899999999999777776666666666 54 8999
Q ss_pred EEcCCCCccccCChHHHHHHHHHHHh
Q 021229 274 VIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 274 ~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+++++||+++.++|+.+++.+.+|++
T Consensus 255 ~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 255 VIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred EeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99999999999999999999988554
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-20 Score=162.88 Aligned_cols=272 Identities=17% Similarity=0.184 Sum_probs=152.0
Q ss_pred eeeeeecCCCceEEEEEecCC-----CCCCCcEEEEccCCCChhhhHHh------hHhhccc-cceEEeecCCCCCCCCC
Q 021229 25 RSSVTDLQDGSVMHCWVPKTR-----NDSKPDLVLIHGLGANALWQWTN------IIPHMIH-YFNVYVPDLLFFGDSFT 92 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~-----~~~~~~vvllHG~~~~~~~~w~~------~~~~l~~-~~~vi~~D~~G~G~S~~ 92 (315)
++..+++.||..+.++..+.. ..++++|||+||++.++. .|.. +...|++ +|+|+++|+||+|.|..
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 556899999998888775422 123678999999987775 4642 2223544 69999999999886632
Q ss_pred -----C-CC---CCCchhHH-HHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCccCch
Q 021229 93 -----T-RP---ERSESFQA-ECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLEEQ 156 (315)
Q Consensus 93 -----~-~~---~~~~~~~a-~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~~~ 156 (315)
. .. +.+...++ .|+.++++.+ ..+++++|||||||.+++.++ .+|+ +|+.++++++.......
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~ 202 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHV 202 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccC
Confidence 1 11 23344445 6777777765 347999999999999998554 5776 67787777665432210
Q ss_pred --hhhhhhhcccchhhhhh-----hccCCCchHHHHHHHh-------------hhccC-CC--CCC-------CCcch-h
Q 021229 157 --DLRDRMFKVSDLEEASK-----ILVPQSPGKLKELMRY-------------TFFKR-PP--LSL-------VPSCL-L 205 (315)
Q Consensus 157 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------~~~~~-~~--~~~-------~~~~~-~ 205 (315)
.+...... ........ .+.+... .+..+... .+... .. ... .|... .
T Consensus 203 ~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~ 280 (395)
T PLN02872 203 TAPLVLRMVF-MHLDQMVVAMGIHQLNFRSD-VLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSV 280 (395)
T ss_pred CCHHHHHHHH-HhHHHHHHHhcCceecCCcH-HHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchH
Confidence 01100000 00000000 0111111 11111000 00000 00 000 00000 0
Q ss_pred HHHHH--HHHH-HHHH-------HHHHhhhccCccccccccccC--CCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEE
Q 021229 206 SDYID--AMCT-EYLE-------EKRELVRAIPKDRKISNIDKI--TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273 (315)
Q Consensus 206 ~~~~~--~~~~-~~~~-------~~~~~~~~~~~~~~~~~l~~i--~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~ 273 (315)
..... ++.. ...+ .....+.... ...-.+.++ ++|+++++|++|.+++++.++.+.+.++...+++
T Consensus 281 k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~--pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 281 KNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVN--PPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred HHHHHHHHHHhcCCcccCCCCchhhHHHhCCCC--CCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 01100 0000 0000 0000000000 011235566 5799999999999999999999998885436889
Q ss_pred EEcCCCCc---cccCChHHHHHHHHHHHhcCC
Q 021229 274 VIKKAGHA---FNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 274 ~i~~~gH~---~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.++++||. +..|.|+++.+.|.+|+++..
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 99999995 455889999999999998543
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=146.04 Aligned_cols=214 Identities=21% Similarity=0.293 Sum_probs=146.8
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAEC 105 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~ 105 (315)
.+.++.|..+-+....+.....++|++.||...+.. .-..+.-.|.. +++|+.+|++|+|.|.....+.......+.
T Consensus 39 ~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~a 117 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKA 117 (258)
T ss_pred EeecCCCCEEEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHH
Confidence 455555654443332222233579999999865543 23334444444 589999999999999876655555556777
Q ss_pred HHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 106 VMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 106 ~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
+.+++++-. .++++|+|+|||+..++.+|.+.| +.++||.++....-
T Consensus 118 vye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~----------------------------- 166 (258)
T KOG1552|consen 118 VYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM----------------------------- 166 (258)
T ss_pred HHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh-----------------------------
Confidence 788887654 689999999999999999999998 89999876532110
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHH
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~ 263 (315)
+.+ +.......+.+ .+ ...+.+..|++|+|++||++|.+++...++++.
T Consensus 167 -rv~---~~~~~~~~~~d-----~f----------------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Ly 215 (258)
T KOG1552|consen 167 -RVA---FPDTKTTYCFD-----AF----------------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALY 215 (258)
T ss_pred -hhh---ccCcceEEeec-----cc----------------------cccCcceeccCCEEEEecccCceecccccHHHH
Confidence 000 00000000000 00 013456789999999999999999999999999
Q ss_pred hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCCC
Q 021229 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 264 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
+......+..++.|+||.-..- ..++.+.+..|+......+
T Consensus 216 e~~k~~~epl~v~g~gH~~~~~-~~~yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 216 ERCKEKVEPLWVKGAGHNDIEL-YPEYIEHLRRFISSVLPSQ 256 (258)
T ss_pred HhccccCCCcEEecCCCccccc-CHHHHHHHHHHHHHhcccC
Confidence 9884345788999999987654 4478899999987665543
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-21 Score=153.64 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=89.6
Q ss_pred eeecCCCc-eEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc--ceEEeecCCCCCCCCCCCC-CCCchhHH
Q 021229 28 VTDLQDGS-VMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY--FNVYVPDLLFFGDSFTTRP-ERSESFQA 103 (315)
Q Consensus 28 ~~~~~~g~-~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~-~~~~~~~a 103 (315)
.+.+.++. +++.+...+....+|.++++||+|.++. .|..+...+... .+|+++|+||||+|....+ +.+.+-++
T Consensus 52 dv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~L-SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~ 130 (343)
T KOG2564|consen 52 DVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSAL-SFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMS 130 (343)
T ss_pred ccccCCCcceEEEEEecCCCCCccEEEEeecCcccch-hHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHH
Confidence 45555443 5666654433557888899999988885 799999988765 7788899999999965433 33444457
Q ss_pred HHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeC
Q 021229 104 ECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCS 149 (315)
Q Consensus 104 ~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~ 149 (315)
.|+-.+++.+ ...+++||||||||.||...|.. .|. +.++++++-
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 7888888876 25789999999999999888765 365 888888763
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-19 Score=175.03 Aligned_cols=248 Identities=17% Similarity=0.236 Sum_probs=140.6
Q ss_pred CCCcEEEEccCCCChhhhHHhh-----Hhhccc-cceEEeecCCCCCCCCCCCCC--CCchhHHHHHHHHHHH---cCCC
Q 021229 48 SKPDLVLIHGLGANALWQWTNI-----IPHMIH-YFNVYVPDLLFFGDSFTTRPE--RSESFQAECVMRVMEA---HSVK 116 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~-----~~~l~~-~~~vi~~D~~G~G~S~~~~~~--~~~~~~a~~~~~~l~~---l~~~ 116 (315)
.++|||||||++.+.. .|+.+ ++.|.+ +|+|+++|+ |.|+.+... .+...+...+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~-~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD-MWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCcEEEECCCCCCcc-ceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 5689999999988875 69865 677755 599999994 766543221 2222233333333332 3357
Q ss_pred ceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCch---hhhhhhhcc--cchh-hhhhh-ccC----------C
Q 021229 117 KLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQ---DLRDRMFKV--SDLE-EASKI-LVP----------Q 178 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~---~~~~~~~~~--~~~~-~~~~~-~~~----------~ 178 (315)
+++|+||||||++++.+++.+ |++|+++|+++++..+... .+....... .... .+... ..+ .
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999998755 5689999998877543211 100000000 0000 00000 000 0
Q ss_pred CchH-H---HHHHHhhhccCCCCCCCCcchhHHHHHHH------HHHHHHHHHHhhh--ccCccc-----cccccccCCC
Q 021229 179 SPGK-L---KELMRYTFFKRPPLSLVPSCLLSDYIDAM------CTEYLEEKRELVR--AIPKDR-----KISNIDKITQ 241 (315)
Q Consensus 179 ~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~~-----~~~~l~~i~~ 241 (315)
.+.. . ..++.. +..+.. ..+......+.... .....+....+.. .+..+. ....+.+|++
T Consensus 222 ~p~~~~~~~~~~~~~-l~~~~~--~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~ 298 (994)
T PRK07868 222 DPVKTAKARVDFLRQ-LHDREA--LLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITC 298 (994)
T ss_pred ChhHHHHHHHHHHHh-cCchhh--hccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCC
Confidence 0000 0 011111 111100 01111111221111 0000111111111 111111 1235789999
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhcCCCcEE-EEEcCCCCcccc---CChHHHHHHHHHHHhcCCC
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQL-IVIKKAGHAFNY---EKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~-~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~~~ 303 (315)
|+|+|+|++|.++|++.++.+.+.+ +++++ .+++++||+.++ ..++++...|.+||.+...
T Consensus 299 P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 299 PVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 9999999999999999999999988 67887 688999998766 4578899999999986543
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=135.03 Aligned_cols=142 Identities=27% Similarity=0.409 Sum_probs=108.0
Q ss_pred cEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH-H-HcCCCceEEEEEchhH
Q 021229 51 DLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM-E-AHSVKKLSLVGLSYGG 127 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l-~-~l~~~~v~lvGhSmGG 127 (315)
+||++||++.+.. .|..+...|.+. |.|+++|+||+|.+.... ..+.+.+.+ . ..+.+++.|+|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-------AVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-------HHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchhH-------HHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 5899999998876 588888888765 999999999999873111 222233332 1 2367899999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
.+++.++.+. .+++++|++++.. ..
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~---~~--------------------------------------------------- 97 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYP---DS--------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESS---GC---------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCcc---ch---------------------------------------------------
Confidence 9999999988 6899999875410 00
Q ss_pred HHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 208 YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
..+.+.++|+++++|++|.+++.+..+.+.+.++.+.+++++++++|+
T Consensus 98 --------------------------~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 --------------------------EDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------------HHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------------------hhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 011234569999999999999999999998888657899999999995
|
... |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=133.70 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=142.4
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH-HcCCCceEEEEEch
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME-AHSVKKLSLVGLSY 125 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~-~l~~~~v~lvGhSm 125 (315)
+.++.++++|=-|+++. .|......+.....++++++||+|.........+...+++.+...+. -.-.+++.+.||||
T Consensus 5 ~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 44668899986666665 36666667777899999999999988766666666667777777776 34456899999999
Q ss_pred hHHHHHHHHHhhhhh---hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 126 GGFVGYSMAAQFKEK---IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 126 GG~ia~~~a~~~p~~---v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||++|.++|.+.... +..+.+.+...+.... ........+ ...+..+... .. .+.
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i~~~~D------------~~~l~~l~~l--gG------~p~ 141 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQIHHLDD------------ADFLADLVDL--GG------TPP 141 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCccCCCH------------HHHHHHHHHh--CC------CCh
Confidence 999999999987542 4445444332221100 011111111 0111111111 00 111
Q ss_pred chh--HHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 203 CLL--SDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 203 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
.+. .++...+ ....+..+..+..++... -..++||+.++.|++|..+..+....+.+......++.+++| ||
T Consensus 142 e~led~El~~l~----LPilRAD~~~~e~Y~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gH 215 (244)
T COG3208 142 ELLEDPELMALF----LPILRADFRALESYRYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GH 215 (244)
T ss_pred HHhcCHHHHHHH----HHHHHHHHHHhcccccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cc
Confidence 111 1111111 111122222222332222 257899999999999999999999989988866789999975 99
Q ss_pred ccccCChHHHHHHHHHHHh
Q 021229 281 AFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 281 ~~~~e~p~~~~~~i~~fl~ 299 (315)
+...++.+++.+.|.+.+.
T Consensus 216 Ffl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 216 FFLNQQREEVLARLEQHLA 234 (244)
T ss_pred eehhhhHHHHHHHHHHHhh
Confidence 9999999999999999885
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=145.56 Aligned_cols=123 Identities=17% Similarity=0.140 Sum_probs=89.3
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCCCCh---hhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANA---LWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~---~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
++.+.|....++..+.+.+..++|||+||++.+. ...|..+.+.|++ +|+|+++|+||||.|.......+.....+
T Consensus 5 l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~ 84 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKE 84 (266)
T ss_pred ecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHH
Confidence 4455666555555443333356899999998642 2257777888874 59999999999999965433333333444
Q ss_pred HHH---HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 105 CVM---RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 105 ~~~---~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
++. +++++.+.++++|+||||||.+++.++.++|++++++|++++..
T Consensus 85 Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 85 DVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 444 45666678899999999999999999999999999999987543
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.1e-18 Score=133.47 Aligned_cols=222 Identities=18% Similarity=0.258 Sum_probs=146.8
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
-++.+.|.++++-|...+ ..+.|+++.+||..++-.. .-+++.-+-. +.+|+.+++||+|+|.....+......++
T Consensus 57 i~l~T~D~vtL~a~~~~~-E~S~pTlLyfh~NAGNmGh-r~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~ 134 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLS-ESSRPTLLYFHANAGNMGH-RLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSE 134 (300)
T ss_pred EEEEcCcceeEeeeeecc-cCCCceEEEEccCCCcccc-hhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHH
Confidence 356677888888776543 3478999999998777543 3333333322 37899999999999976544443333444
Q ss_pred HHHHHHHH---cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 105 CVMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 105 ~~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
.+.+.+.. +...|++|.|.|+||++|+.+|++..+++.++|+-++....+.. +...+.+..
T Consensus 135 avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~--------------~i~~v~p~~-- 198 (300)
T KOG4391|consen 135 AVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHM--------------AIPLVFPFP-- 198 (300)
T ss_pred HHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhh--------------hhheeccch--
Confidence 44444432 24578999999999999999999999999999887654322111 000000000
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
.+. ++.+...+.. . ....+++-++|.|+|.|.+|.++|+-+-++
T Consensus 199 -~k~--------------i~~lc~kn~~------------------~---S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~ 242 (300)
T KOG4391|consen 199 -MKY--------------IPLLCYKNKW------------------L---SYRKIGQCRMPFLFISGLKDELVPPVMMRQ 242 (300)
T ss_pred -hhH--------------HHHHHHHhhh------------------c---chhhhccccCceEEeecCccccCCcHHHHH
Confidence 000 0100000000 0 011234556899999999999999999999
Q ss_pred HHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 262 LKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 262 l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
+.+..+ ...++.++|++.|.-.+- -+-+.++|.+||.+...
T Consensus 243 Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 243 LYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred HHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 998875 347899999999987764 35778999999976544
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.6e-16 Score=132.67 Aligned_cols=262 Identities=20% Similarity=0.254 Sum_probs=153.5
Q ss_pred eEEEEEecCCCC-CCCcEEEEccCCCCh---h--------hhHHhhHhh---cc-ccceEEeecCCCCC-CCCCCC----
Q 021229 36 VMHCWVPKTRND-SKPDLVLIHGLGANA---L--------WQWTNIIPH---MI-HYFNVYVPDLLFFG-DSFTTR---- 94 (315)
Q Consensus 36 ~~~~~~~~~~~~-~~~~vvllHG~~~~~---~--------~~w~~~~~~---l~-~~~~vi~~D~~G~G-~S~~~~---- 94 (315)
.+.|.++.+-+. ....||++||+.+++ . | |+.++-. +. .+|.|||.|..|.+ .|+.+.
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GW-W~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p 115 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGW-WDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINP 115 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCcc-HHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCC
Confidence 344544432222 334788899987743 2 5 7766532 32 45999999999876 332221
Q ss_pred ---------CCCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc
Q 021229 95 ---------PERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164 (315)
Q Consensus 95 ---------~~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (315)
|..+..+++..-..++++||++++. +||-|||||.|++++..+|++|++++.++++....+..+.-....
T Consensus 116 ~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~ 195 (368)
T COG2021 116 GGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQ 195 (368)
T ss_pred CCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHH
Confidence 2234445555556788999999986 999999999999999999999999999987765554332100000
Q ss_pred ccchhhhhhhc---------cCCCchHHHHHH-----------HhhhccCCCCC----CCCcchhHHHHHHHHHHHHHH-
Q 021229 165 VSDLEEASKIL---------VPQSPGKLKELM-----------RYTFFKRPPLS----LVPSCLLSDYIDAMCTEYLEE- 219 (315)
Q Consensus 165 ~~~~~~~~~~~---------~~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~- 219 (315)
...+. ....+ .|...-.+.+.+ ...|.+..... ......++.|++.........
T Consensus 196 r~AI~-~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rf 274 (368)
T COG2021 196 RQAIE-ADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARF 274 (368)
T ss_pred HHHHH-hCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhcc
Confidence 00000 00000 000011111111 11222211000 001123344444332221111
Q ss_pred ----HHHhhhccCccc-------cccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcE-EEEE-cCCCCccccCC
Q 021229 220 ----KRELVRAIPKDR-------KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ-LIVI-KKAGHAFNYEK 286 (315)
Q Consensus 220 ----~~~~~~~~~~~~-------~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~-~~~i-~~~gH~~~~e~ 286 (315)
...+.+++...+ ....+.++++|+|++.=+.|.++|++..+.+.+.++ .+. +++| ...||..++..
T Consensus 275 DaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~-~~~~~~~i~S~~GHDaFL~e 353 (368)
T COG2021 275 DANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALP-AAGALREIDSPYGHDAFLVE 353 (368)
T ss_pred CcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhcc-ccCceEEecCCCCchhhhcc
Confidence 111222222222 223477899999999999999999999999999984 443 5444 56899999988
Q ss_pred hHHHHHHHHHHHhc
Q 021229 287 PKEFYKHLKSFLLD 300 (315)
Q Consensus 287 p~~~~~~i~~fl~~ 300 (315)
.+.+...|.+||+.
T Consensus 354 ~~~~~~~i~~fL~~ 367 (368)
T COG2021 354 SEAVGPLIRKFLAL 367 (368)
T ss_pred hhhhhHHHHHHhhc
Confidence 88999999999974
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.8e-17 Score=134.19 Aligned_cols=177 Identities=14% Similarity=0.141 Sum_probs=112.7
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCC-----------CCCCCch---hHHHHH----
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTT-----------RPERSES---FQAECV---- 106 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~-----------~~~~~~~---~~a~~~---- 106 (315)
.+..+.|||+||+|++.. .|.++.+.|... +.+..++++|...+... ....... ...+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 445678999999999986 599998888754 33444444454321100 0000000 111122
Q ss_pred HHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
..+.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------------------------- 139 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------------------------- 139 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------------------------
Confidence 223334443 5799999999999999999999877666654422100
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
. .+. ....+.|+++++|++|+++|.+.++.+.+
T Consensus 140 -----------~---~~~---------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 140 -----------S---LPE---------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred -----------c---ccc---------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 0 000 01135799999999999999998888877
Q ss_pred hcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 265 HLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 265 ~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.+. .++++++++++||.+..+.-+...+.+.++|.+.+
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~~~ 213 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPKRY 213 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcchhh
Confidence 652 34688899999999976555555566666554443
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.1e-15 Score=129.43 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=71.2
Q ss_pred CCCCcEEEEccCCCChhhhHHh--hHhhccc--cceEEeecC--CCCCCCCCC-----------------CC---CCC-c
Q 021229 47 DSKPDLVLIHGLGANALWQWTN--IIPHMIH--YFNVYVPDL--LFFGDSFTT-----------------RP---ERS-E 99 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~--~~~~l~~--~~~vi~~D~--~G~G~S~~~-----------------~~---~~~-~ 99 (315)
++.|+|+|+||++.+.. .|.. .+..+.. ++.|++||. +|+|.+... .+ ... .
T Consensus 40 ~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~ 118 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMY 118 (275)
T ss_pred CCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHH
Confidence 34688999999988764 4643 2344443 599999998 455433210 00 001 1
Q ss_pred hhHHHHHHHHHHH---cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 100 SFQAECVMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 100 ~~~a~~~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
.+..+++..++++ ++.+++.++||||||.+|+.++.++|+.+++++++++.
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 2235566667766 35578999999999999999999999999999887654
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-15 Score=129.76 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=68.3
Q ss_pred CCCcEEEEccCCCChhhhHHhh---Hhhccc-cceEEeecCCCCCCC-----CC-------------CCCC----CCchh
Q 021229 48 SKPDLVLIHGLGANALWQWTNI---IPHMIH-YFNVYVPDLLFFGDS-----FT-------------TRPE----RSESF 101 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~---~~~l~~-~~~vi~~D~~G~G~S-----~~-------------~~~~----~~~~~ 101 (315)
+.|.|+|+||++++.. .|... ...+.. .+.|+.+|..++|.. .. ..+. ....+
T Consensus 46 ~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 46 KVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 5688999999988764 45432 233333 599999999877621 10 0000 11122
Q ss_pred HHHH----HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 102 QAEC----VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 102 ~a~~----~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
..++ +.+..+.++.++++|+||||||..|+.++.++|+++++++.+++.
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2333 333344457789999999999999999999999999998887654
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-16 Score=132.35 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=141.9
Q ss_pred eeeeeeecCCC-ceEEEEEecCCCCCCCcEEEEccCCCChhhhH-HhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCch
Q 021229 24 FRSSVTDLQDG-SVMHCWVPKTRNDSKPDLVLIHGLGANALWQW-TNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 24 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
+....+.+++| .....|...+.+..+|.||++||+.+++.-.+ ..+...+. ++|.|+++|.||||.+....+...-+
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc
Confidence 33346777665 55667876556677889999999866543223 33444454 45999999999999886433332222
Q ss_pred hHHHHHHHHHHH----cCCCceEEEEEchhH-HHHHHHHHhhhh-hhceeEEeeCCCccCchh-hhhhhhcccchhhhhh
Q 021229 101 FQAECVMRVMEA----HSVKKLSLVGLSYGG-FVGYSMAAQFKE-KIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASK 173 (315)
Q Consensus 101 ~~a~~~~~~l~~----l~~~~v~lvGhSmGG-~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 173 (315)
...+|+..+++. ....++..||.|+|| +++..++..--+ .+.+.+.++.+..+.... ..+.-+.. . -...
T Consensus 129 G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~-~--ly~r 205 (345)
T COG0429 129 GETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL-R--LYSR 205 (345)
T ss_pred cchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh-h--hhHH
Confidence 223444444443 346789999999999 666666554432 456666666554332100 00000000 0 0000
Q ss_pred hccCCCchHHHHHHHhhhcc-CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh-----------ccCccccccccccCCC
Q 021229 174 ILVPQSPGKLKELMRYTFFK-RPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR-----------AIPKDRKISNIDKITQ 241 (315)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~i~~ 241 (315)
.+ ...+.+.+...... .+. .+... .+.+..+. ...++-+.+. ...+......+++|.+
T Consensus 206 ~l----~~~L~~~~~~kl~~l~~~---~p~~~-~~~ik~~~--ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~ 275 (345)
T COG0429 206 YL----LRNLKRNAARKLKELEPS---LPGTV-LAAIKRCR--TIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRK 275 (345)
T ss_pred HH----HHHHHHHHHHHHHhcCcc---cCcHH-HHHHHhhc--hHHhccceeeecccCCCcHHHHHHhcccccccccccc
Confidence 00 00000000000000 000 01110 00001000 0000000000 0001113456889999
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC----ChH-HHHHHHHHHHhc
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE----KPK-EFYKHLKSFLLD 300 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~ 300 (315)
|+|+|+..+|++++++.........+++..+.+-+.+||.-++. +|. ...+.|.+|++.
T Consensus 276 PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 276 PTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred ceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 99999999999999977666665455788999999999988887 443 455677777764
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.2e-15 Score=117.27 Aligned_cols=219 Identities=19% Similarity=0.233 Sum_probs=133.0
Q ss_pred CCCCcEEEEccCCCChhhh-HHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCC-c--eEEE
Q 021229 47 DSKPDLVLIHGLGANALWQ-WTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVK-K--LSLV 121 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~-w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~-~--v~lv 121 (315)
++...+|++||+-++.... ...++..+++ .+.++.+|++|-|+|............++++..+++.+-.. . -+++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~ 110 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVIL 110 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEE
Confidence 4566899999998776432 3345556654 49999999999999975433333444578999999888432 3 3588
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCC-CCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPL-SLV 200 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 200 (315)
|||-||-+++.++.++++ ++.+|.++ +-......+... ..+..+.+.....|...+.. ...
T Consensus 111 gHSkGg~Vvl~ya~K~~d-~~~viNcs-GRydl~~~I~eR----------------lg~~~l~~ike~Gfid~~~rkG~y 172 (269)
T KOG4667|consen 111 GHSKGGDVVLLYASKYHD-IRNVINCS-GRYDLKNGINER----------------LGEDYLERIKEQGFIDVGPRKGKY 172 (269)
T ss_pred eecCccHHHHHHHHhhcC-chheEEcc-cccchhcchhhh----------------hcccHHHHHHhCCceecCcccCCc
Confidence 999999999999999987 56665543 321111100000 01112222322233221110 000
Q ss_pred CcchhHH-HHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCC
Q 021229 201 PSCLLSD-YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 201 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~g 279 (315)
+..+..+ ..+.+... +..+..+ -..+||+|-+||..|.+||.+.+..+++.+ ++.+++++||+.
T Consensus 173 ~~rvt~eSlmdrLntd-------~h~aclk-------Id~~C~VLTvhGs~D~IVPve~AkefAk~i-~nH~L~iIEgAD 237 (269)
T KOG4667|consen 173 GYRVTEESLMDRLNTD-------IHEACLK-------IDKQCRVLTVHGSEDEIVPVEDAKEFAKII-PNHKLEIIEGAD 237 (269)
T ss_pred CceecHHHHHHHHhch-------hhhhhcC-------cCccCceEEEeccCCceeechhHHHHHHhc-cCCceEEecCCC
Confidence 1111111 10111000 0011110 135799999999999999999999999999 689999999999
Q ss_pred CccccCChHHHHHHHHHHHh
Q 021229 280 HAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 280 H~~~~e~p~~~~~~i~~fl~ 299 (315)
|.....+- +.+.....|..
T Consensus 238 Hnyt~~q~-~l~~lgl~f~k 256 (269)
T KOG4667|consen 238 HNYTGHQS-QLVSLGLEFIK 256 (269)
T ss_pred cCccchhh-hHhhhcceeEE
Confidence 98776443 45566666654
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.7e-15 Score=128.46 Aligned_cols=109 Identities=19% Similarity=0.293 Sum_probs=73.9
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH-
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA- 112 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~- 112 (315)
..+..+.+ ...+..|+|||+||++.+.. .|..+.+.|++. |.|+++|++|++.+.. . .... .+..+.+++.+
T Consensus 39 ~p~~v~~P-~~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~--~-~~i~-d~~~~~~~l~~~ 112 (313)
T PLN00021 39 KPLLVATP-SEAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDG--T-DEIK-DAAAVINWLSSG 112 (313)
T ss_pred ceEEEEeC-CCCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCc--h-hhHH-HHHHHHHHHHhh
Confidence 33444443 23456789999999998876 488888888765 9999999998753321 1 1111 12222333321
Q ss_pred ----------cCCCceEEEEEchhHHHHHHHHHhhhh-----hhceeEEeeC
Q 021229 113 ----------HSVKKLSLVGLSYGGFVGYSMAAQFKE-----KIEKVVICCS 149 (315)
Q Consensus 113 ----------l~~~~v~lvGhSmGG~ia~~~a~~~p~-----~v~~lil~~~ 149 (315)
.+.++++|+||||||.+|+.+|.++++ +++++|++++
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 234789999999999999999999875 4677776654
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.7e-15 Score=121.65 Aligned_cols=264 Identities=16% Similarity=0.209 Sum_probs=143.9
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhh-----HhhccccceEEeecCCCCCCCCCCCC-C---C
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNI-----IPHMIHYFNVYVPDLLFFGDSFTTRP-E---R 97 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~-----~~~l~~~~~vi~~D~~G~G~S~~~~~-~---~ 97 (315)
..+.++-| .+++......++++|+||=.|-.|.|...+|..+ ...+.+++-|+=+|.||+.+.....+ + -
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccccccc
Confidence 34566656 3566554333345899999999888865445544 34566779999999999976643322 2 2
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc-
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV- 176 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (315)
+.+.+++++.+++++++++.++-+|--.|+.|-..+|.++|++|.++||+++...... +.+.... .+....+
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g--w~Ew~~~-----K~~~~~L~ 153 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG--WMEWFYQ-----KLSSWLLY 153 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHH-----HHH-----
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc--HHHHHHH-----HHhccccc
Confidence 4556789999999999999999999999999999999999999999999976443221 1111110 0000000
Q ss_pred -CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHHhhhccCcc-ccccccccCCCCeEEEEeCCCCC
Q 021229 177 -PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVRAIPKD-RKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
........+.+...++..... .....+++.+.+.+... .......+++++... +.....+...||+|+|.|+..+.
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~-~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~ 232 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEE-ENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH 232 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHH-HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT
T ss_pred ccccccchHHhhhhcccccccc-cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc
Confidence 001111222222221111000 00111223332222111 112222223332222 22234456679999999999877
Q ss_pred CchHHHHHHHhhcCC-CcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 254 FPLELGRRLKSHLGD-NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
. +.+..+.+.++| ..++..+++||=.+..|+|+++.+.+.=||+..
T Consensus 233 ~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 233 V--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp H--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred h--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 4 455677777753 589999999999999999999999999999754
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-16 Score=139.11 Aligned_cols=107 Identities=17% Similarity=0.220 Sum_probs=80.1
Q ss_pred CCCCCcEEEEccCCCChh-hhHHh-hHhhcc---ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc------C
Q 021229 46 NDSKPDLVLIHGLGANAL-WQWTN-IIPHMI---HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH------S 114 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~-~~w~~-~~~~l~---~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l------~ 114 (315)
+.++|++|+||||+.+.. ..|.+ +...+. .+++|+++|++|||.|..+.........++++.++++.+ +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 356789999999987542 24665 455442 359999999999998864422222334456666666654 3
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+++++||||||||.||..++.++|++|.++++++++.+
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 68999999999999999999999999999999987543
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.3e-15 Score=141.58 Aligned_cols=230 Identities=21% Similarity=0.299 Sum_probs=136.3
Q ss_pred eeeecCCCceEEEEEecCCCCC----CCcEEEEccCCCChh-hhHHhhHhhc-cccceEEeecCCC---CCCCCCC----
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDS----KPDLVLIHGLGANAL-WQWTNIIPHM-IHYFNVYVPDLLF---FGDSFTT---- 93 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~----~~~vvllHG~~~~~~-~~w~~~~~~l-~~~~~vi~~D~~G---~G~S~~~---- 93 (315)
.+....||.+++.|...+.+.+ -|.||++||.+.... +.+......+ ..+|.|+.+++|| +|.....
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~ 447 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG 447 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence 3455568999999986553332 278999999754321 1233334444 4569999999995 4433211
Q ss_pred CCCCCchhHHHHHHHHHHHcC-C--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhh
Q 021229 94 RPERSESFQAECVMRVMEAHS-V--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEE 170 (315)
Q Consensus 94 ~~~~~~~~~a~~~~~~l~~l~-~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 170 (315)
..............+++++.+ + +++.++|||+||.+++..+.+.| .+++.+...++...... .....
T Consensus 448 ~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~------~~~~~--- 517 (620)
T COG1506 448 DWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY------FGEST--- 517 (620)
T ss_pred ccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh------ccccc---
Confidence 111111111222223555554 2 48999999999999999999988 66666554333211100 00000
Q ss_pred hhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 171 ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
. .+.-........ +.. ..+.+. .........++++|+|+|||++
T Consensus 518 ---------~-~~~~~~~~~~~~-------~~~-~~~~~~------------------~~sp~~~~~~i~~P~LliHG~~ 561 (620)
T COG1506 518 ---------E-GLRFDPEENGGG-------PPE-DREKYE------------------DRSPIFYADNIKTPLLLIHGEE 561 (620)
T ss_pred ---------h-hhcCCHHHhCCC-------ccc-ChHHHH------------------hcChhhhhcccCCCEEEEeecC
Confidence 0 000000000000 000 000000 0112334578999999999999
Q ss_pred CCCCchHHHHHHHhhcC---CCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhcCC
Q 021229 251 DQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 302 (315)
|.-||.+.++++.+.+. ...+++++|+.||.+.. ++-..+.+.+.+|+++..
T Consensus 562 D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 562 DDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 99999999998887652 45899999999998877 556678888899987654
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.1e-14 Score=114.31 Aligned_cols=266 Identities=17% Similarity=0.217 Sum_probs=164.1
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhh-----HhhccccceEEeecCCCCCCCCCCCC---
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNI-----IPHMIHYFNVYVPDLLFFGDSFTTRP--- 95 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~-----~~~l~~~~~vi~~D~~G~G~S~~~~~--- 95 (315)
.++..+.+.-|. +|+......++.+|.||=.|..|.+...+|..+ +..+..++-|+-+|.|||-.....-+
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeecccccc-EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCC
Confidence 345556665564 455544322335778888999998875445443 34455668999999999865533222
Q ss_pred -CCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhh
Q 021229 96 -ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKI 174 (315)
Q Consensus 96 -~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
.-+.+..++++..++++++++.|+-+|.-.|+.|-..+|..||++|.+|||++.-..... |.+.... .+...
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~-----K~~s~ 173 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYN-----KVSSN 173 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHH-----HHHHH
Confidence 234566799999999999999999999999999999999999999999999986443322 1211110 00000
Q ss_pred ccC--CCchHHHHHHHh-hhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHHhhhccCccccc-c----ccccCCCCeEE
Q 021229 175 LVP--QSPGKLKELMRY-TFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVRAIPKDRKI-S----NIDKITQPTLI 245 (315)
Q Consensus 175 ~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~l~~i~~P~lv 245 (315)
+.. -......+++.. .|.+... .....++++|.+.+... .......++.++...++. . ....++||+|+
T Consensus 174 ~l~~~Gmt~~~~d~ll~H~Fg~e~~--~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vll 251 (326)
T KOG2931|consen 174 LLYYYGMTQGVKDYLLAHHFGKEEL--GNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLL 251 (326)
T ss_pred HHHhhchhhhHHHHHHHHHhccccc--cccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEE
Confidence 000 001122333322 2322211 01223344443322221 112222233333322211 1 11267799999
Q ss_pred EEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.|+..+.+. ....+...+. .+..+..+.+||=.++.++|.++.+.+.=||+..
T Consensus 252 vvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 252 VVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred EecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 9999988753 4555666664 4578999999999999999999999999999854
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=119.77 Aligned_cols=105 Identities=14% Similarity=0.148 Sum_probs=68.1
Q ss_pred CCCCCcEEEEccCCCChhhhHH---hhHhhcc-ccceEEeecCCCCCCCCCCC----CC-----CCchh-HHHHHHHHHH
Q 021229 46 NDSKPDLVLIHGLGANALWQWT---NIIPHMI-HYFNVYVPDLLFFGDSFTTR----PE-----RSESF-QAECVMRVME 111 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~---~~~~~l~-~~~~vi~~D~~G~G~S~~~~----~~-----~~~~~-~a~~~~~~l~ 111 (315)
++..|.||++||.+.+.. .+. .....+. .+|.|++||++|+|.+.... +. ..... ..+.+..+.+
T Consensus 10 ~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 345788999999987654 233 1222332 35999999999987543210 00 00111 1122223333
Q ss_pred HcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 112 AHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 112 ~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
..++ ++++|+||||||.+++.++.++|+.+.+++.+++..
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3333 589999999999999999999999999988876544
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-15 Score=122.46 Aligned_cols=191 Identities=20% Similarity=0.277 Sum_probs=112.5
Q ss_pred HhhHhhc-cccceEEeecCCCCCCCCCC---C-CCCCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHH
Q 021229 67 TNIIPHM-IHYFNVYVPDLLFFGDSFTT---R-PERSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 67 ~~~~~~l-~~~~~vi~~D~~G~G~S~~~---~-~~~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
......| ..+|.|+.+|+||.+..... . .........+|+.+.++.+ +.+++.++|||+||.+++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 3345566 45799999999987643211 0 1111122344555555443 3478999999999999999999
Q ss_pred hhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHH
Q 021229 136 QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE 215 (315)
Q Consensus 136 ~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (315)
++|+++++++..++........... . . +..... .....+. . ..+......
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~~~~~~------~------------~--~~~~~~-~~~~~~~------~-~~~~~~~~s-- 133 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFSYYGTT------D------------I--YTKAEY-LEYGDPW------D-NPEFYRELS-- 133 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTCSBHHT------C------------C--HHHGHH-HHHSSTT------T-SHHHHHHHH--
T ss_pred ccceeeeeeeccceecchhcccccc------c------------c--cccccc-cccCccc------h-hhhhhhhhc--
Confidence 9999999988776543322110000 0 0 000000 0001100 0 011111000
Q ss_pred HHHHHHHhhhccCcccccccccc--CCCCeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCccc-cCChHH
Q 021229 216 YLEEKRELVRAIPKDRKISNIDK--ITQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFN-YEKPKE 289 (315)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~--i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~-~e~p~~ 289 (315)
....+.+ +++|+|+++|++|..||++.+..+.+.+ +.+++++++|++||.+. .+...+
T Consensus 134 ----------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 134 ----------------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp ----------------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHH
T ss_pred ----------------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHH
Confidence 1112333 7899999999999999999888887665 23589999999999555 344568
Q ss_pred HHHHHHHHHhcCCC
Q 021229 290 FYKHLKSFLLDSQP 303 (315)
Q Consensus 290 ~~~~i~~fl~~~~~ 303 (315)
..+.+.+|+++...
T Consensus 198 ~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 198 WYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC
Confidence 88899999986543
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.2e-14 Score=123.02 Aligned_cols=267 Identities=18% Similarity=0.232 Sum_probs=135.8
Q ss_pred eeeeeeecCCCceEEE-EE-ecCC-----CCCCCcEEEEccCCCChhhh-HHhhHhh-ccccceEEeecCCCCCCCCCCC
Q 021229 24 FRSSVTDLQDGSVMHC-WV-PKTR-----NDSKPDLVLIHGLGANALWQ-WTNIIPH-MIHYFNVYVPDLLFFGDSFTTR 94 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~-~~-~~~~-----~~~~~~vvllHG~~~~~~~~-w~~~~~~-l~~~~~vi~~D~~G~G~S~~~~ 94 (315)
++...++++||-++.+ |. .+.. .+..|.||++||+.+++... -..++.. ..++|+|+++..||+|.|.-+.
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 4556788887754443 33 2211 24678999999986654322 2333333 3456999999999999886444
Q ss_pred CCCCchhHHHHHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhh--hhceeEEeeCCCccC--chhhhhhhhccc
Q 021229 95 PERSESFQAECVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKE--KIEKVVICCSGVCLE--EQDLRDRMFKVS 166 (315)
Q Consensus 95 ~~~~~~~~a~~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~--~v~~lil~~~~~~~~--~~~~~~~~~~~~ 166 (315)
+........+|+.++++++ ...+...+|.||||.+...|...-.+ .+.+.+.++.+...- ...+......
T Consensus 173 pr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~-- 250 (409)
T KOG1838|consen 173 PRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYR-- 250 (409)
T ss_pred CceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccch--
Confidence 3322222344555555544 45689999999999999999887544 355555555554321 1100000000
Q ss_pred chhhhhhhccCCCchHHHHHHH---hhhccC-CCCCCC-CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC
Q 021229 167 DLEEASKILVPQSPGKLKELMR---YTFFKR-PPLSLV-PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ 241 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 241 (315)
........ ..+.+++. ..+... ..+..+ ...-++++-+.. ....-......+...+......+.+|++
T Consensus 251 ---~~y~~~l~---~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~-t~~~~gf~~~deYY~~aSs~~~v~~I~V 323 (409)
T KOG1838|consen 251 ---RFYNRALT---LNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEAL-TRPMFGFKSVDEYYKKASSSNYVDKIKV 323 (409)
T ss_pred ---HHHHHHHH---HhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhh-hhhhcCCCcHHHHHhhcchhhhcccccc
Confidence 00000000 00011100 000000 000000 000111111100 0000000000000111223457889999
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCC----hHHHHHH-HHHHHh
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEK----PKEFYKH-LKSFLL 299 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~~-i~~fl~ 299 (315)
|+|+|...+|+++|++..-.-.-.-+++.-+++-..+||.-++|. +....+. +.+|+.
T Consensus 324 P~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 324 PLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 999999999999998643222222236777777788999998887 2333333 666664
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-13 Score=113.99 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=81.3
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcCCC-ceEEEEEchh
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHSVK-KLSLVGLSYG 126 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~~~-~v~lvGhSmG 126 (315)
.+||-+||-+++.. .|..+.+.|.+ +.|+|.+.+||+|.+.... -.++-...+..+.++++.++++ +++.+|||.|
T Consensus 36 gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrG 114 (297)
T PF06342_consen 36 GTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRG 114 (297)
T ss_pred eeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccc
Confidence 38999999988875 68889999976 4999999999999997543 2334444577889999999974 6789999999
Q ss_pred HHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 127 GFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 127 G~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+-.|+.+|..+| +.+++|+++..
T Consensus 115 cenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 115 CENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred hHHHHHHHhcCc--cceEEEecCCc
Confidence 999999999996 57999997654
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.1e-13 Score=113.89 Aligned_cols=220 Identities=16% Similarity=0.188 Sum_probs=129.1
Q ss_pred CcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCC-ceEEEEEchhH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVK-KLSLVGLSYGG 127 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~-~v~lvGhSmGG 127 (315)
++|+|+||.+++.. .|.++.+.+... +.|+.++.+|++.. ..+..+...+++...+.+.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 37999999988875 699999999997 99999999998822 234455666666666666665544 99999999999
Q ss_pred HHHHHHHHhhhh---hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcch
Q 021229 128 FVGYSMAAQFKE---KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 128 ~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (315)
.+|+++|.+.-+ .|..++++++..+..... ... .. ..... ..+.+....... . ....
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~-~~~-~~-~~~~~------------~~~~~~~~~~~~-~----~~~~ 137 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKER-PRS-RE-PSDEQ------------FIEELRRIGGTP-D----ASLE 137 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSC-HHH-HH-CHHHH------------HHHHHHHHCHHH-H----HHCH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccc-hhh-hh-hhHHH------------HHHHHHHhcCCc-h----hhhc
Confidence 999999998754 478899998654322110 000 00 00000 001110000000 0 0000
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH---HHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE---LGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~---~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
..+....+........ ....... ......-.+|.++.....|+..... ....+.+......+++.++| +|+
T Consensus 138 ~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~ 211 (229)
T PF00975_consen 138 DEELLARLLRALRDDF-QALENYS----IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHF 211 (229)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHTCS-----TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETT
T ss_pred CHHHHHHHHHHHHHHH-HHHhhcc----CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCc
Confidence 0011111111111111 1111110 0001111567899999999888766 34446777655578889975 999
Q ss_pred cccC-ChHHHHHHHHHHH
Q 021229 282 FNYE-KPKEFYKHLKSFL 298 (315)
Q Consensus 282 ~~~e-~p~~~~~~i~~fl 298 (315)
.++. +..++.+.|.++|
T Consensus 212 ~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 212 SMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp GHHSTTHHHHHHHHHHHH
T ss_pred EecchHHHHHHHHHhccC
Confidence 9887 6678888888775
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.2e-15 Score=126.98 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=73.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhh-Hhh-cc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc------CCC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNI-IPH-MI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH------SVK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~-~~~-l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l------~~~ 116 (315)
+.++|++|+||||+++....|... ... +. .+++|+++|+++++.+............++++.++++.+ +.+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 456789999999988763246543 333 33 459999999998743321111111112234444444433 457
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+++||||||||.+|..++.++|++|.++++++++.+
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 899999999999999999999999999999986543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=114.15 Aligned_cols=177 Identities=21% Similarity=0.343 Sum_probs=102.2
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhh--ccccceEEeecCCC------CCC---CCCC----CCCC--Cch---hHHH
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPH--MIHYFNVYVPDLLF------FGD---SFTT----RPER--SES---FQAE 104 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~--l~~~~~vi~~D~~G------~G~---S~~~----~~~~--~~~---~~a~ 104 (315)
.+...+.|||+||+|.+.. .|...... .....++++++-|- .|. +--+ .+.. ... ..++
T Consensus 10 ~~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 3456779999999999885 46555441 22346777665431 233 1110 1111 111 1233
Q ss_pred HHHHHHHHc-----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 105 CVMRVMEAH-----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 105 ~~~~~l~~l-----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
.+.++++.. ..++++|.|.|.||++|+.++.++|+.+.++|.+++.......
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~----------------------- 145 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE----------------------- 145 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC-----------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc-----------------------
Confidence 445555432 3468999999999999999999999999999988654321100
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
... ..... -++|++++||++|+++|.+.+
T Consensus 146 --------------------~~~-----------------------------~~~~~--~~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 146 --------------------LED-----------------------------RPEAL--AKTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp --------------------CHC-----------------------------CHCCC--CTS-EEEEEETT-SSSTHHHH
T ss_pred --------------------ccc-----------------------------ccccc--CCCcEEEEecCCCCcccHHHH
Confidence 000 00001 168999999999999999888
Q ss_pred HHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 260 RRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 260 ~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+...+.+. .+.++..++++||.+. .+..+.+.+||++
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 77776652 3578999999999886 3445667788764
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.8e-13 Score=115.73 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=73.6
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCch--
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSES-- 100 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~-- 100 (315)
.+...+|. +..+...+.....|.||++||.| ++.. .|..+...|.+ ++.|+.+|+|...+.. .+....+
T Consensus 61 ~i~~~~g~-i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~--~p~~~~D~~ 136 (318)
T PRK10162 61 MVPTPYGQ-VETRLYYPQPDSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEAR--FPQAIEEIV 136 (318)
T ss_pred EEecCCCc-eEEEEECCCCCCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCC--CCCcHHHHH
Confidence 34444553 33332222233467899999966 3333 47777777765 5999999999654331 1111111
Q ss_pred hHHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhh------hhhceeEEeeCCC
Q 021229 101 FQAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFK------EKIEKVVICCSGV 151 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p------~~v~~lil~~~~~ 151 (315)
...+.+.+..+.+++ ++++|+|+|+||.+|+.++.+.. .++.+++++.+..
T Consensus 137 ~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 137 AVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 112233333445554 58999999999999999998653 4678888776543
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-13 Score=123.90 Aligned_cols=227 Identities=13% Similarity=0.185 Sum_probs=124.7
Q ss_pred CCCCcEEEEccCCCChhhhHH-----hhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH----HHcCCC
Q 021229 47 DSKPDLVLIHGLGANALWQWT-----NIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM----EAHSVK 116 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~-----~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l----~~l~~~ 116 (315)
..+.|||+++.+- +..+.|+ .++..|. ++|+|+++|+++-+.+.. ..+.+.+.+.+.+.+ +.-|.+
T Consensus 213 v~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 213 QHARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred cCCCcEEEechhh-hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 4567999999975 4434453 4566554 569999999987665532 233333333444433 444788
Q ss_pred ceEEEEEchhHHHHHH----HHHhhhh-hhceeEEeeCCCccCchhhhhhhhcccch---hhhhhhccCCCchHHHH---
Q 021229 117 KLSLVGLSYGGFVGYS----MAAQFKE-KIEKVVICCSGVCLEEQDLRDRMFKVSDL---EEASKILVPQSPGKLKE--- 185 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~----~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--- 185 (315)
+++++|+||||.++.. +++++++ +|++++++.+...+..............+ +.............+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~ 368 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFA 368 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 9999999999999887 8888886 79999999887766532100000000000 00000000000111111
Q ss_pred ----------HHHhhh-c-cCCCCC----CCCcchhHHHHHHHHHHHHHHHHHhhh--ccCc-c-----ccccccccCCC
Q 021229 186 ----------LMRYTF-F-KRPPLS----LVPSCLLSDYIDAMCTEYLEEKRELVR--AIPK-D-----RKISNIDKITQ 241 (315)
Q Consensus 186 ----------~~~~~~-~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----~~~~~l~~i~~ 241 (315)
.+...+ . +.+... |..+.. .+-..+..++. .++. .+.+ + ...-.+.+|++
T Consensus 369 ~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t--~lPg~~~~e~l----~ly~~N~L~~pG~l~v~G~~idL~~I~~ 442 (560)
T TIGR01839 369 WMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTT--RLPAAFHGDLL----DMFKSNPLTRPDALEVCGTPIDLKKVKC 442 (560)
T ss_pred hcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCc--cchHHHHHHHH----HHHhcCCCCCCCCEEECCEEechhcCCC
Confidence 110001 0 110000 000000 00001111111 1111 1122 1 12346789999
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~ 284 (315)
|++++.|++|.++|.+.+..+.+.++.+.+++.. .+||.--+
T Consensus 443 Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIggi 484 (560)
T TIGR01839 443 DSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQSI 484 (560)
T ss_pred CeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccccc
Confidence 9999999999999999999999998766777666 57996543
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-12 Score=113.17 Aligned_cols=226 Identities=18% Similarity=0.263 Sum_probs=119.0
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC-C-------C-------
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT-R-------P------- 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~-~-------~------- 95 (315)
+|..++.|...+. .++-|.||.+||.+.... .|...+.....+|-|+.+|.||.|..... . .
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~ 143 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGI 143 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTT
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCc
Confidence 5677777765443 455678899999988764 47666666667899999999999932210 0 0
Q ss_pred CC-Cch-hH---HHHHH---HHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc
Q 021229 96 ER-SES-FQ---AECVM---RVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164 (315)
Q Consensus 96 ~~-~~~-~~---a~~~~---~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (315)
.. ... ++ ..+.. +++..+ +.+++.+.|.|.||.+++.+|+..| +|++++...+..+.... ...
T Consensus 144 ~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~-----~~~ 217 (320)
T PF05448_consen 144 DDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRR-----ALE 217 (320)
T ss_dssp TS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHH-----HHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhh-----hhh
Confidence 00 111 11 12222 233333 3468999999999999999999876 68888766543322110 000
Q ss_pred ccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeE
Q 021229 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTL 244 (315)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 244 (315)
... .......+..+++.. .. . + ......++.+...+.....++|++|++
T Consensus 218 ~~~--------~~~~y~~~~~~~~~~--d~-~----~----------------~~~~~v~~~L~Y~D~~nfA~ri~~pvl 266 (320)
T PF05448_consen 218 LRA--------DEGPYPEIRRYFRWR--DP-H----H----------------EREPEVFETLSYFDAVNFARRIKCPVL 266 (320)
T ss_dssp HT----------STTTHHHHHHHHHH--SC-T----H----------------CHHHHHHHHHHTT-HHHHGGG--SEEE
T ss_pred cCC--------ccccHHHHHHHHhcc--CC-C----c----------------ccHHHHHHHHhhhhHHHHHHHcCCCEE
Confidence 000 000001111111100 00 0 0 000011111111122223468999999
Q ss_pred EEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHH-HHHHHHHHhc
Q 021229 245 ILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEF-YKHLKSFLLD 300 (315)
Q Consensus 245 vi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~-~~~i~~fl~~ 300 (315)
+-.|-.|++||+.........++...++.+++..||...- ++ .+...+||.+
T Consensus 267 ~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~----~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 267 FSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP----EFQEDKQLNFLKE 319 (320)
T ss_dssp EEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH----HHHHHHHHHHHHH
T ss_pred EEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh----hHHHHHHHHHHhc
Confidence 9999999999999999999988767899999999997643 33 6667777754
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-12 Score=121.24 Aligned_cols=121 Identities=14% Similarity=0.064 Sum_probs=82.6
Q ss_pred ecCCCceEEEEEecC-CCCCCCcEEEEccCCCChh--hhHH-hhHhhc-cccceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 30 DLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANAL--WQWT-NIIPHM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 30 ~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~--~~w~-~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
...||..+++....+ +.++.|+||++||++.+.. +.+. .....+ ..+|.|+++|+||+|.|........ ...++
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~~ 80 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEAA 80 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccch
Confidence 346888888654432 2345688999999987542 1122 122333 4579999999999999975422221 22344
Q ss_pred HHHHHHHHc-----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 105 CVMRVMEAH-----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 105 ~~~~~l~~l-----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
++.++++.+ ...+|.++||||||.+++.+|..+|+++++++..++..
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 444444433 23589999999999999999999999999998776543
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-12 Score=110.61 Aligned_cols=246 Identities=12% Similarity=0.140 Sum_probs=140.1
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFV 129 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~i 129 (315)
|+||++..+..+...--...++.|..++.|+..|+.--+...........+++.+.+.++++++|.+ ++|+|+|+||..
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~ 181 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVP 181 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHH
Confidence 7999999887554332345677776699999999965443322223445556677889999999877 999999999999
Q ss_pred HHHHHHhh-----hhhhceeEEeeCCCccCch-hhhhhhhcccchhhhhhhc---cC---------CCchHHH-------
Q 021229 130 GYSMAAQF-----KEKIEKVVICCSGVCLEEQ-DLRDRMFKVSDLEEASKIL---VP---------QSPGKLK------- 184 (315)
Q Consensus 130 a~~~a~~~-----p~~v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~------- 184 (315)
++.+++.+ |+++++++++.+++..... .....+.....+....... .+ ..+..+.
T Consensus 182 ~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~m 261 (406)
T TIGR01849 182 VLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISM 261 (406)
T ss_pred HHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHc
Confidence 88777766 5679999999888765431 2111111100110111000 00 0111100
Q ss_pred ----------HHHHhhhccCCCCCCCCcchhHHHHHHHH-------HHHHHHHHHhhhc--cCccc-----cccccccCC
Q 021229 185 ----------ELMRYTFFKRPPLSLVPSCLLSDYIDAMC-------TEYLEEKRELVRA--IPKDR-----KISNIDKIT 240 (315)
Q Consensus 185 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~-----~~~~l~~i~ 240 (315)
+++......... ...-...+.+... .-+.+....++.. +.++. ..-++++|+
T Consensus 262 np~r~~~~~~~~~~~l~~gd~~----~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~ 337 (406)
T TIGR01849 262 NLDRHTKAHSDFFLHLVKGDGQ----EADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAIT 337 (406)
T ss_pred CcchHHHHHHHHHHHHhcCCcc----hHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCc
Confidence 000000000000 0000000001000 0011111112211 11211 233567899
Q ss_pred -CCeEEEEeCCCCCCchHHHHHHHhh---cC-CCcEEEEEcCCCCccccC---ChHHHHHHHHHHHhc
Q 021229 241 -QPTLILWGEHDQIFPLELGRRLKSH---LG-DNAQLIVIKKAGHAFNYE---KPKEFYKHLKSFLLD 300 (315)
Q Consensus 241 -~P~lvi~G~~D~~~~~~~~~~l~~~---~~-~~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~ 300 (315)
+|+|.|.|++|.++|+...+.+.+. ++ .+.+.++.+++||.-.+- -++++.-.|.+||.+
T Consensus 338 ~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 338 RVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 9999999999999999988888776 34 245577777999977663 246888899999874
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.6e-13 Score=106.64 Aligned_cols=173 Identities=20% Similarity=0.297 Sum_probs=113.1
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCC--CCCCCC----CCCCCCCc-------hhHHHHHHHHHH
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLL--FFGDSF----TTRPERSE-------SFQAECVMRVME 111 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~--G~G~S~----~~~~~~~~-------~~~a~~~~~~l~ 111 (315)
+++..|.||++||+|++.. .+-+....+..+++++.+-=+ -.|.-. ........ ..+++.+.+..+
T Consensus 14 ~~p~~~~iilLHG~Ggde~-~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDEL-DLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChh-hhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 3445667999999998763 566655556666777665311 111000 00000111 112445566666
Q ss_pred HcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHh
Q 021229 112 AHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRY 189 (315)
Q Consensus 112 ~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (315)
+.++ ++++++|+|-||++++.+..++|+.++++++.++....+..
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 7776 79999999999999999999999999999887543321100
Q ss_pred hhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC--
Q 021229 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-- 267 (315)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-- 267 (315)
. . -..-..|+++++|++|++||...+.++.+.+.
T Consensus 140 ----~-~---------------------------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~ 175 (207)
T COG0400 140 ----L-L---------------------------------------PDLAGTPILLSHGTEDPVVPLALAEALAEYLTAS 175 (207)
T ss_pred ----c-c---------------------------------------cccCCCeEEEeccCcCCccCHHHHHHHHHHHHHc
Confidence 0 0 00124699999999999999998888877652
Q ss_pred -CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 268 -DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 268 -~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+++...++ .||.+..|. .+.+.+|+.+
T Consensus 176 g~~v~~~~~~-~GH~i~~e~----~~~~~~wl~~ 204 (207)
T COG0400 176 GADVEVRWHE-GGHEIPPEE----LEAARSWLAN 204 (207)
T ss_pred CCCEEEEEec-CCCcCCHHH----HHHHHHHHHh
Confidence 457888887 799887543 3555557654
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-11 Score=107.16 Aligned_cols=234 Identities=13% Similarity=0.098 Sum_probs=118.0
Q ss_pred eeeeecCCCceEEEE-EecCCCCCCCcEEEEccCCCC-hhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 26 SSVTDLQDGSVMHCW-VPKTRNDSKPDLVLIHGLGAN-ALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~-~~~~~~~~~~~vvllHG~~~~-~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
+-.+...+ .++-.+ ..+.++ ++.|+|++.|...+ ....|....+.+. .++.++++|.||-|.|....-....+..
T Consensus 167 ~v~iP~eg-~~I~g~LhlP~~~-~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l 244 (411)
T PF06500_consen 167 EVEIPFEG-KTIPGYLHLPSGE-KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRL 244 (411)
T ss_dssp EEEEEETT-CEEEEEEEESSSS-S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHH
T ss_pred EEEEeeCC-cEEEEEEEcCCCC-CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHH
Confidence 33444444 444433 333333 33455555553333 3222444445565 5699999999999998643222222334
Q ss_pred HHHHHHHHHHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 103 AECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 103 a~~~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
-+.|.+.+.... .++|.++|.||||.+|..+|..++++++++|..+++...--. +. .. ....
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft---~~--------~~----~~~~ 309 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT---DP--------EW----QQRV 309 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH----H--------HH----HTTS
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc---cH--------HH----HhcC
Confidence 455666666654 468999999999999999999999999999887665421100 00 00 0011
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccc--ccCCCCeEEEEeCCCCCCchH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI--DKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lvi~G~~D~~~~~~ 257 (315)
|..+...+...+... ..-...+... ..-+.-..+ ..+ ++.++|+|.+.|++|+++|.+
T Consensus 310 P~my~d~LA~rlG~~-------~~~~~~l~~e---------l~~~SLk~q----GlL~~rr~~~plL~i~~~~D~v~P~e 369 (411)
T PF06500_consen 310 PDMYLDVLASRLGMA-------AVSDESLRGE---------LNKFSLKTQ----GLLSGRRCPTPLLAINGEDDPVSPIE 369 (411)
T ss_dssp -HHHHHHHHHHCT-S-------CE-HHHHHHH---------GGGGSTTTT----TTTTSS-BSS-EEEEEETT-SSS-HH
T ss_pred CHHHHHHHHHHhCCc-------cCCHHHHHHH---------HHhcCcchh----ccccCCCCCcceEEeecCCCCCCCHH
Confidence 222222222221110 0000011000 000010011 122 567899999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 258 LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 258 ~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
..+-++..- .+.+...++... ..+.-+.-...+.+||++
T Consensus 370 D~~lia~~s-~~gk~~~~~~~~---~~~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 370 DSRLIAESS-TDGKALRIPSKP---LHMGYPQALDEIYKWLED 408 (411)
T ss_dssp HHHHHHHTB-TT-EEEEE-SSS---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCCceeecCCCc---cccchHHHHHHHHHHHHH
Confidence 988888765 567888887654 122223556777888865
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.5e-12 Score=106.61 Aligned_cols=177 Identities=24% Similarity=0.378 Sum_probs=100.9
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCc-----------hhHHHHHHHHHHHc-
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSE-----------SFQAECVMRVMEAH- 113 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~-----------~~~a~~~~~~l~~l- 113 (315)
++.|.||++|++.+-.. .-..+...|++ +|.|++||+-+-............ .....++.+.++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 46789999998644322 24456667765 599999998542220111111100 11223343334433
Q ss_pred --C---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 114 --S---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 114 --~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
. .+++.++|+||||.+++.++.+. ..+++.+..-+...
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------------------------------------ 133 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------------------------------------ 133 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------------------------------------
Confidence 3 36899999999999999998877 56777765422000
Q ss_pred hhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc--
Q 021229 189 YTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL-- 266 (315)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~-- 266 (315)
+. . ......++++|+++++|++|+.++.+..+.+.+.+
T Consensus 134 ------------~~---~-------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 134 ------------PP---P-------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp ------------GG---G-------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred ------------CC---c-------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 00 0 00113457899999999999999998766666655
Q ss_pred -CCCcEEEEEcCCCCccccCChH--------HHHHHHHHHHhcC
Q 021229 267 -GDNAQLIVIKKAGHAFNYEKPK--------EFYKHLKSFLLDS 301 (315)
Q Consensus 267 -~~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~~ 301 (315)
+...++++++|++|.+.....+ +-.+.+.+||++.
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 4578999999999987664432 3335667777653
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-12 Score=102.71 Aligned_cols=157 Identities=20% Similarity=0.301 Sum_probs=95.8
Q ss_pred EEEEccCCCChhhhHHhhHh-hccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC--CCceEEEEEchhHH
Q 021229 52 LVLIHGLGANALWQWTNIIP-HMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS--VKKLSLVGLSYGGF 128 (315)
Q Consensus 52 vvllHG~~~~~~~~w~~~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~--~~~v~lvGhSmGG~ 128 (315)
|+++||++++....|.+-.. .+...++|-.+|+ + .|. ..+.+.++-++++ .++++|||||+|+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~--~P~-----~~~W~~~l~~~i~~~~~~~ilVaHSLGc~ 67 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------D--NPD-----LDEWVQALDQAIDAIDEPTILVAHSLGCL 67 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------T--S-------HHHHHHHHHHCCHC-TTTEEEEEETHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------C--CCC-----HHHHHHHHHHHHhhcCCCeEEEEeCHHHH
Confidence 68999998876545766443 4555578877776 1 121 2333333333332 35699999999999
Q ss_pred HHHHHH-HhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 129 VGYSMA-AQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 129 ia~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
.++.++ ...+.+|.+++|+++.-.. ... .. ... + . .+ .+
T Consensus 68 ~~l~~l~~~~~~~v~g~lLVAp~~~~-~~~--~~---~~~-----------------------~-~--~f--~~------ 107 (171)
T PF06821_consen 68 TALRWLAEQSQKKVAGALLVAPFDPD-DPE--PF---PPE-----------------------L-D--GF--TP------ 107 (171)
T ss_dssp HHHHHHHHTCCSSEEEEEEES--SCG-CHH--CC---TCG-----------------------G-C--CC--TT------
T ss_pred HHHHHHhhcccccccEEEEEcCCCcc-ccc--ch---hhh-----------------------c-c--cc--cc------
Confidence 999999 6677899999999654211 000 00 000 0 0 00 00
Q ss_pred HHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCCh
Q 021229 208 YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP 287 (315)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p 287 (315)
.....+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+-..+--
T Consensus 108 --------------------------~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 108 --------------------------LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp --------------------------SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGTH
T ss_pred --------------------------CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccCC
Confidence 001124467799999999999999999999998 6899999999999876544
Q ss_pred HH
Q 021229 288 KE 289 (315)
Q Consensus 288 ~~ 289 (315)
..
T Consensus 160 ~~ 161 (171)
T PF06821_consen 160 GP 161 (171)
T ss_dssp SS
T ss_pred Cc
Confidence 33
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.7e-12 Score=102.30 Aligned_cols=224 Identities=20% Similarity=0.284 Sum_probs=135.8
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC---CCCC----------
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT---RPER---------- 97 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~---~~~~---------- 97 (315)
+|.+++.|...+. .+.-|.||-.||.+++.. .|..++..-..+|.|+.+|-||-|.|+.. .+..
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrG 143 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRG 143 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEee
Confidence 5778898875443 356688999999999875 68888888888999999999999987431 1111
Q ss_pred ----Cchh----HHHHHHHHHHH---c---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh
Q 021229 98 ----SESF----QAECVMRVMEA---H---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163 (315)
Q Consensus 98 ----~~~~----~a~~~~~~l~~---l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 163 (315)
...+ .-.++..+++. + .-+++.+.|.|.||.|++..++..| ++++++.+-+..+...
T Consensus 144 ilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~-------- 214 (321)
T COG3458 144 ILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFP-------- 214 (321)
T ss_pred cccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccch--------
Confidence 0000 01222333332 2 3478999999999999999988776 7888775433221110
Q ss_pred cccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCe
Q 021229 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 243 (315)
++... .......++.. |.++-. +. ....++.+..-+......++++|+
T Consensus 215 ------r~i~~---~~~~~ydei~~--y~k~h~----~~-----------------e~~v~~TL~yfD~~n~A~RiK~pv 262 (321)
T COG3458 215 ------RAIEL---ATEGPYDEIQT--YFKRHD----PK-----------------EAEVFETLSYFDIVNLAARIKVPV 262 (321)
T ss_pred ------hheee---cccCcHHHHHH--HHHhcC----ch-----------------HHHHHHHHhhhhhhhHHHhhccce
Confidence 11110 00111111111 111100 00 000111111111112245799999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+..|-.|++||+...-..++.+....++.+++.-+|. +-|.--++.+..|++..
T Consensus 263 L~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe---~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 263 LMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHE---GGPGFQSRQQVHFLKIL 317 (321)
T ss_pred EEeecccCCCCCChhhHHHhhcccCCceEEEeeccccc---cCcchhHHHHHHHHHhh
Confidence 99999999999999999999988666778888876664 34555566677777643
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.5e-12 Score=106.15 Aligned_cols=113 Identities=20% Similarity=0.328 Sum_probs=90.2
Q ss_pred CCceEEEEEecCC---CC-CCCcEEEEccCCCChhhhHHhhHhhcccc----------ceEEeecCCCCCCCCCCC-CCC
Q 021229 33 DGSVMHCWVPKTR---ND-SKPDLVLIHGLGANALWQWTNIIPHMIHY----------FNVYVPDLLFFGDSFTTR-PER 97 (315)
Q Consensus 33 ~g~~~~~~~~~~~---~~-~~~~vvllHG~~~~~~~~w~~~~~~l~~~----------~~vi~~D~~G~G~S~~~~-~~~ 97 (315)
.|..+|+....+. .+ .-.||+++|||+++-. .+.++++.|.+- |.||+|.+||+|-|+.+. ...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCc
Confidence 5778888654321 11 2238999999999874 688999988532 799999999999998653 455
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEE
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil 146 (315)
.....|..+..+|-.+|..++.+=|-.||..|+..+|..+|++|.++-+
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 5555677788888889999999999999999999999999999987643
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=95.70 Aligned_cols=194 Identities=15% Similarity=0.184 Sum_probs=123.1
Q ss_pred eeeeeecCCC-ceEEEEEecCCCCCCCcEEEEccC---CCChh-hhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC-C
Q 021229 25 RSSVTDLQDG-SVMHCWVPKTRNDSKPDLVLIHGL---GANAL-WQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE-R 97 (315)
Q Consensus 25 ~~~~~~~~~g-~~~~~~~~~~~~~~~~~vvllHG~---~~~~~-~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~ 97 (315)
.+.++.+++- -++.....++..+..|..|.+|.. |++-. -.-..+...|.+ +|.++.||+||-|.|...... .
T Consensus 3 ~~~~v~i~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~Gi 82 (210)
T COG2945 3 HMPTVIINGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGI 82 (210)
T ss_pred CCCcEEecCCcccceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCc
Confidence 3445556421 134444433333445555777743 22210 122334444544 499999999999999765322 2
Q ss_pred CchhHHHHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 98 SESFQAECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
-+...+..+.+++++...+ .+.|.|.|+|+.|++.+|.+.|+. ...+.+.+... .
T Consensus 83 GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~--~-------------------- 139 (210)
T COG2945 83 GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPIN--A-------------------- 139 (210)
T ss_pred chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCC--c--------------------
Confidence 3344566677888777533 346899999999999999998763 22221111000 0
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
.+ ...+....+|.++|+|+.|.+++
T Consensus 140 ------------------------------~d-------------------------fs~l~P~P~~~lvi~g~~Ddvv~ 164 (210)
T COG2945 140 ------------------------------YD-------------------------FSFLAPCPSPGLVIQGDADDVVD 164 (210)
T ss_pred ------------------------------hh-------------------------hhhccCCCCCceeEecChhhhhc
Confidence 00 00122345799999999999999
Q ss_pred hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 256 LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 256 ~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.....++++.. ..+++++++++|+++-. -+.+.+.|.+||.
T Consensus 165 l~~~l~~~~~~--~~~~i~i~~a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 165 LVAVLKWQESI--KITVITIPGADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred HHHHHHhhcCC--CCceEEecCCCceeccc-HHHHHHHHHHHhh
Confidence 98888888774 46788999999999874 5688999999996
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.5e-10 Score=92.53 Aligned_cols=181 Identities=17% Similarity=0.252 Sum_probs=102.2
Q ss_pred EEEEccCCCChhh-hHHhhHhhccc---cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhH
Q 021229 52 LVLIHGLGANALW-QWTNIIPHMIH---YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGG 127 (315)
Q Consensus 52 vvllHG~~~~~~~-~w~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG 127 (315)
|+.||||.++..- .-..+...+.+ ..++.++|++. ......+.+.+++++...+.+.|||.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-----------~p~~a~~~l~~~i~~~~~~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-----------FPEEAIAQLEQLIEELKPENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-----------CHHHHHHHHHHHHHhCCCCCeEEEEEChHH
Confidence 7999999876531 11122333433 35677787742 122335567788888877779999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc-hhH
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC-LLS 206 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 206 (315)
..|..+|.+++ +++ ||+++....... +...+.... ... +-... +..
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav~p~~~--------------------------l~~~iG~~~--~~~--~~e~~~~~~ 117 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAVRPYEL--------------------------LQDYIGEQT--NPY--TGESYELTE 117 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCCCHHHH--------------------------HHHhhCccc--cCC--CCccceech
Confidence 99999999885 334 777766532110 000000000 000 00000 000
Q ss_pred HHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCC
Q 021229 207 DYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEK 286 (315)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~ 286 (315)
+.+.. ++.+.. ....-..+++++.++.|.+++.+.+. ... .++..++.+|++|.+. .
T Consensus 118 ~~~~~------------l~~l~~-----~~~~~~~~~lvll~~~DEvLd~~~a~---~~~-~~~~~~i~~ggdH~f~--~ 174 (187)
T PF05728_consen 118 EHIEE------------LKALEV-----PYPTNPERYLVLLQTGDEVLDYREAV---AKY-RGCAQIIEEGGDHSFQ--D 174 (187)
T ss_pred Hhhhh------------cceEec-----cccCCCccEEEEEecCCcccCHHHHH---HHh-cCceEEEEeCCCCCCc--c
Confidence 11000 000000 00223468999999999999985433 233 3455567788899775 4
Q ss_pred hHHHHHHHHHHHh
Q 021229 287 PKEFYKHLKSFLL 299 (315)
Q Consensus 287 p~~~~~~i~~fl~ 299 (315)
-++....|.+|+.
T Consensus 175 f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 175 FEEYLPQIIAFLQ 187 (187)
T ss_pred HHHHHHHHHHhhC
Confidence 6677788888863
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.1e-11 Score=123.21 Aligned_cols=100 Identities=16% Similarity=0.161 Sum_probs=82.7
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC-CceEEEEEchh
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV-KKLSLVGLSYG 126 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~-~~v~lvGhSmG 126 (315)
++++|+|+||+++++. .|..+.+.|...++|+++|++|+|.+. ....+...+++++.+.++.+.. .+++++|||||
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 4578999999998875 699999999989999999999998652 3345666778888888887654 58999999999
Q ss_pred HHHHHHHHHhh---hhhhceeEEeeCC
Q 021229 127 GFVGYSMAAQF---KEKIEKVVICCSG 150 (315)
Q Consensus 127 G~ia~~~a~~~---p~~v~~lil~~~~ 150 (315)
|.+|+++|.+. ++++..++++++.
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 99999999975 5678888888653
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.7e-11 Score=100.55 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=75.9
Q ss_pred CcEEEEccCCCChhhhHHhhHhhc----cccceEEeecCCCCCCCCCC------CCCCCchhHHHHHHHHHHHc------
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHM----IHYFNVYVPDLLFFGDSFTT------RPERSESFQAECVMRVMEAH------ 113 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l----~~~~~vi~~D~~G~G~S~~~------~~~~~~~~~a~~~~~~l~~l------ 113 (315)
..||||+|.++--.+ +.+.+..| ...+.|++....||-.+... ...++..++.+...++++++
T Consensus 3 ~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred EEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 468999999987764 66665554 35699999999999877543 13345555666666666554
Q ss_pred CCCceEEEEEchhHHHHHHHHHhhh---hhhceeEEeeCCC
Q 021229 114 SVKKLSLVGLSYGGFVGYSMAAQFK---EKIEKVVICCSGV 151 (315)
Q Consensus 114 ~~~~v~lvGhSmGG~ia~~~a~~~p---~~v~~lil~~~~~ 151 (315)
...+++|+|||+|+.|++++..+++ .+|.+++++-+.+
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3467999999999999999999999 6888888886654
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.5e-10 Score=95.13 Aligned_cols=196 Identities=17% Similarity=0.276 Sum_probs=123.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCC-CCCCCCC--C----C---
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFF-GDSFTTR--P----E--- 96 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~-G~S~~~~--~----~--- 96 (315)
.+..+++..-.|+..+.+.+..|.||++|+..+-.. ....+.+.|+.. |.|++||+-+. |.+.... + .
T Consensus 6 ~~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~ 84 (236)
T COG0412 6 TIPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLV 84 (236)
T ss_pred EeeCCCceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhh
Confidence 344455333334444333333488999999654333 367788888764 99999999763 3332111 0 0
Q ss_pred --CCchhHHHHHHHHHHHc---C---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccch
Q 021229 97 --RSESFQAECVMRVMEAH---S---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL 168 (315)
Q Consensus 97 --~~~~~~a~~~~~~l~~l---~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 168 (315)
........++.+.++.+ . .++|.++|+||||.+++.++.+.| .+++.+..-+..
T Consensus 85 ~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~----------------- 146 (236)
T COG0412 85 ERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL----------------- 146 (236)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC-----------------
Confidence 01122233444444433 3 567999999999999999999887 566665431110
Q ss_pred hhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEe
Q 021229 169 EEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWG 248 (315)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 248 (315)
. .. ......++++|+|+++|
T Consensus 147 ---------------------------~----~~-----------------------------~~~~~~~~~~pvl~~~~ 166 (236)
T COG0412 147 ---------------------------I----AD-----------------------------DTADAPKIKVPVLLHLA 166 (236)
T ss_pred ---------------------------C----CC-----------------------------cccccccccCcEEEEec
Confidence 0 00 00013468899999999
Q ss_pred CCCCCCchHHHHHHHhhcCC---CcEEEEEcCCCCccccCC--------h---HHHHHHHHHHHhcCC
Q 021229 249 EHDQIFPLELGRRLKSHLGD---NAQLIVIKKAGHAFNYEK--------P---KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~~---~~~~~~i~~~gH~~~~e~--------p---~~~~~~i~~fl~~~~ 302 (315)
+.|..+|.+....+.+.+.. ..++.+++++.|.++-+. + +.-.+.+.+|+++.+
T Consensus 167 ~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 167 GEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999877777766532 478899999999887543 1 344567777777554
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.1e-12 Score=118.84 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=67.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCC---------CCC--------------CCchhHHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTT---------RPE--------------RSESFQAE 104 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~---------~~~--------------~~~~~~a~ 104 (315)
.|+|||+||++++.. .|..+.+.|. .+|+|+++|+||||+|... ... ...+..+.
T Consensus 449 ~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 449 WPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 358999999999986 5999999997 4699999999999999432 000 12334456
Q ss_pred HHHHHHHHcC----------------CCceEEEEEchhHHHHHHHHHhh
Q 021229 105 CVMRVMEAHS----------------VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 105 ~~~~~l~~l~----------------~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
|+..+...++ ..+++++||||||.++..++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 6666665554 35899999999999999999763
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-10 Score=92.22 Aligned_cols=228 Identities=15% Similarity=0.255 Sum_probs=110.1
Q ss_pred eeeecCCCceEEEEEecCCC---CCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCC-CCCCCCCCCCCchh
Q 021229 27 SVTDLQDGSVMHCWVPKTRN---DSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFF-GDSFTTRPERSESF 101 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~---~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~-G~S~~~~~~~~~~~ 101 (315)
..+.+.||.++++|...+.+ ...++||+-.||+..-. .+..++.+|+.+ |+|+.+|...| |.|+..-.+.+.+.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~ 83 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSI 83 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------HHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHH
Confidence 45778899999999865532 24578999999988765 588889988765 99999999876 88876655555544
Q ss_pred HH---HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 102 QA---ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 102 ~a---~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
.. ..+.++++..|..++-|+.-|+.|-||+..|.+- .+.-+|...+...+.. . ..+..+.- ++..
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~-T-Le~al~~D--------yl~~ 151 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD-T-LEKALGYD--------YLQL 151 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH-H-HHHHHSS---------GGGS
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH-H-HHHHhccc--------hhhc
Confidence 33 3466777788999999999999999999999854 3566665432221110 0 00000000 0000
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcch-hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCL-LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
+.+.+.+- ..| ....+ ...|+........... ......++.+++|++.+++++|.+|...
T Consensus 152 ~i~~lp~d--ldf--------eGh~l~~~vFv~dc~e~~w~~l---------~ST~~~~k~l~iP~iaF~A~~D~WV~q~ 212 (294)
T PF02273_consen 152 PIEQLPED--LDF--------EGHNLGAEVFVTDCFEHGWDDL---------DSTINDMKRLSIPFIAFTANDDDWVKQS 212 (294)
T ss_dssp -GGG--SE--EEE--------TTEEEEHHHHHHHHHHTT-SSH---------HHHHHHHTT--S-EEEEEETT-TTS-HH
T ss_pred chhhCCCc--ccc--------cccccchHHHHHHHHHcCCccc---------hhHHHHHhhCCCCEEEEEeCCCccccHH
Confidence 00000000 000 00000 0112111111100000 0022345678999999999999999988
Q ss_pred HHHHHHhhcC-CCcEEEEEcCCCCccccCCh
Q 021229 258 LGRRLKSHLG-DNAQLIVIKKAGHAFNYEKP 287 (315)
Q Consensus 258 ~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p 287 (315)
....+...++ ..++++.++|++|-... +|
T Consensus 213 eV~~~~~~~~s~~~klysl~Gs~HdL~e-nl 242 (294)
T PF02273_consen 213 EVEELLDNINSNKCKLYSLPGSSHDLGE-NL 242 (294)
T ss_dssp HHHHHHTT-TT--EEEEEETT-SS-TTS-SH
T ss_pred HHHHHHHhcCCCceeEEEecCccchhhh-Ch
Confidence 8888877664 45899999999998764 44
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-10 Score=100.55 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=133.3
Q ss_pred CCCcEEEEccCCCChhhhHHh-----hHh-hccccceEEeecCCCCCCCCCCC--CCCCchhHHHHHHHHHHHcCCCceE
Q 021229 48 SKPDLVLIHGLGANALWQWTN-----IIP-HMIHYFNVYVPDLLFFGDSFTTR--PERSESFQAECVMRVMEAHSVKKLS 119 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~-----~~~-~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~a~~~~~~l~~l~~~~v~ 119 (315)
-+.|++++|-+--.. +.|+- .+. .+.+++.|..+|+++-..+.... .++......+.+..+.+..+.++|+
T Consensus 106 ~~~PlLiVpP~iNk~-yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~In 184 (445)
T COG3243 106 LKRPLLIVPPWINKF-YILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDIN 184 (445)
T ss_pred CCCceEeeccccCce-eEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 467899999864332 33431 222 34566999999998655554311 1111122345566666777889999
Q ss_pred EEEEchhHHHHHHHHHhhhhh-hceeEEeeCCCccCchhhhhhhhc---ccchh------------hh---hhhccCCCc
Q 021229 120 LVGLSYGGFVGYSMAAQFKEK-IEKVVICCSGVCLEEQDLRDRMFK---VSDLE------------EA---SKILVPQSP 180 (315)
Q Consensus 120 lvGhSmGG~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~---~~~~~------------~~---~~~~~~~~~ 180 (315)
++|+|.||++...+++.++.+ |++++++.+...+........... +...+ .+ ...+.+...
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndl 264 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDL 264 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCcccc
Confidence 999999999999999999988 999999877765543110000000 00000 00 000000000
Q ss_pred hHHHHHHHhhhccCCCC-----------CCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC
Q 021229 181 GKLKELMRYTFFKRPPL-----------SLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 249 (315)
- ...++.....+..+. ..++.....++++..+.+.. -+-..+.-....-.+.+|+||++.+.|+
T Consensus 265 i-w~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~----l~~g~~~v~G~~VdL~~It~pvy~~a~~ 339 (445)
T COG3243 265 I-WNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENR----LIRGGLEVSGTMVDLGDITCPVYNLAAE 339 (445)
T ss_pred c-hHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhCh----hhccceEECCEEechhhcccceEEEeec
Confidence 0 000000000010000 01222222233222221110 0001111112334678999999999999
Q ss_pred CCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCC-hHH--------HHHHHHHHHhcCCC
Q 021229 250 HDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEK-PKE--------FYKHLKSFLLDSQP 303 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~-p~~--------~~~~i~~fl~~~~~ 303 (315)
+|.++|.+.....++.++...+++.. ++||...+=+ |.. .......|+.+..+
T Consensus 340 ~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 340 EDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKE 401 (445)
T ss_pred ccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhcc
Confidence 99999999999898888544666555 7899876544 221 12355667665443
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.4e-09 Score=104.20 Aligned_cols=237 Identities=16% Similarity=0.141 Sum_probs=129.9
Q ss_pred eeecCCCceEEEEE-ecC---CCCCCCcEEEEccCCCCh-hhhHHhhHh-hccccceEEeecCCCCC---CCCCC-----
Q 021229 28 VTDLQDGSVMHCWV-PKT---RNDSKPDLVLIHGLGANA-LWQWTNIIP-HMIHYFNVYVPDLLFFG---DSFTT----- 93 (315)
Q Consensus 28 ~~~~~~g~~~~~~~-~~~---~~~~~~~vvllHG~~~~~-~~~w~~~~~-~l~~~~~vi~~D~~G~G---~S~~~----- 93 (315)
.++..||..+++|. .++ .+++.|.||++||....+ ...|..... .+..+|-|+.++.||-| .....
T Consensus 420 ~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~ 499 (686)
T PRK10115 420 WITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL 499 (686)
T ss_pred EEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh
Confidence 34457899888753 222 234568899999954433 122443333 44567999999999743 22111
Q ss_pred CCCCCchhHHHHHHHHHHHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhh
Q 021229 94 RPERSESFQAECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEE 170 (315)
Q Consensus 94 ~~~~~~~~~a~~~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 170 (315)
....+..+....+..++ ..+ .+++.+.|.|.||.++...+.++|++++++|...+...+.. .+.. ..
T Consensus 500 ~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~-----~~~~-~~--- 569 (686)
T PRK10115 500 KKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVT-----TMLD-ES--- 569 (686)
T ss_pred cCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhh-----hccc-CC---
Confidence 11122222222222333 334 46899999999999999999999999999886544322110 0000 00
Q ss_pred hhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC-eEEEEeC
Q 021229 171 ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP-TLILWGE 249 (315)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~ 249 (315)
.+....... .+..+. . .+.. ..+ ........+.+++.| +|+++|+
T Consensus 570 -----~p~~~~~~~------e~G~p~---~-----~~~~------------~~l---~~~SP~~~v~~~~~P~lLi~~g~ 615 (686)
T PRK10115 570 -----IPLTTGEFE------EWGNPQ---D-----PQYY------------EYM---KSYSPYDNVTAQAYPHLLVTTGL 615 (686)
T ss_pred -----CCCChhHHH------HhCCCC---C-----HHHH------------HHH---HHcCchhccCccCCCceeEEecC
Confidence 000000000 011110 0 0000 000 011233455677889 5667999
Q ss_pred CCCCCchHHHHHHHhhcC---CCcEEEEE---cCCCCccccCChHHHH--HHHHHHHhcCCCCCCCC
Q 021229 250 HDQIFPLELGRRLKSHLG---DNAQLIVI---KKAGHAFNYEKPKEFY--KHLKSFLLDSQPSPLPP 308 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~---~~~~~~~i---~~~gH~~~~e~p~~~~--~~i~~fl~~~~~~~~~~ 308 (315)
+|.-||+..+.++...+. ...+++++ +++||...-.+-+.+. .....||......-.|+
T Consensus 616 ~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~~~~ 682 (686)
T PRK10115 616 HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGTLPA 682 (686)
T ss_pred CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCcCCC
Confidence 999999988888876652 34677788 8999984333332222 23356776555544443
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=96.81 Aligned_cols=103 Identities=21% Similarity=0.299 Sum_probs=67.3
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcc---------ccceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHc----
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMI---------HYFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAH---- 113 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l---- 113 (315)
++.|||||||.+++.. .|+.+...+. ..+++++.|+.......... ......+..+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4679999999988765 4655544431 23789999987543221111 1112223345555666555
Q ss_pred -CCCceEEEEEchhHHHHHHHHHhhh---hhhceeEEeeCCC
Q 021229 114 -SVKKLSLVGLSYGGFVGYSMAAQFK---EKIEKVVICCSGV 151 (315)
Q Consensus 114 -~~~~v~lvGhSmGG~ia~~~a~~~p---~~v~~lil~~~~~ 151 (315)
+.++++||||||||.+|..++...+ +.|+.+|.++++.
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 5689999999999999988877543 4688888876654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=91.73 Aligned_cols=255 Identities=15% Similarity=0.100 Sum_probs=131.3
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC---CC-chhHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE---RS-ESFQA 103 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~---~~-~~~~a 103 (315)
+-..||..+.....+..+.....|+.-.+.|.... .++++...+++ .|+|+.+|+||-|.|+..... .. .+...
T Consensus 10 l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~ 88 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWAR 88 (281)
T ss_pred cccCCCccCccccccCCCCCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhh
Confidence 34468876666554433332334555555555543 36667776665 499999999999999754322 11 11112
Q ss_pred HHHH----HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 104 ECVM----RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 104 ~~~~----~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
.|+. .+-+.+...+...|||||||.+.- ++.++| +........++..+....-.........+.. ...+ .
T Consensus 89 ~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~g-L~~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~---lv~p-~ 162 (281)
T COG4757 89 LDFPAALAALKKALPGHPLYFVGHSFGGQALG-LLGQHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWN---LVGP-P 162 (281)
T ss_pred cchHHHHHHHHhhCCCCceEEeeccccceeec-ccccCc-ccceeeEeccccccccchhhhhcccceeecc---cccc-c
Confidence 2233 333334556889999999998764 445555 5555555555444332110000000000000 0000 0
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
...+...+.+.+..... .+|..+..++........ ..+.........+....+++|+..+...+|+.+|+...
T Consensus 163 lt~w~g~~p~~l~G~G~--d~p~~v~RdW~RwcR~p~-----y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~ 235 (281)
T COG4757 163 LTFWKGYMPKDLLGLGS--DLPGTVMRDWARWCRHPR-----YYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASR 235 (281)
T ss_pred hhhccccCcHhhcCCCc--cCcchHHHHHHHHhcCcc-----ccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHH
Confidence 00011111111111111 234444444432211100 00000000001233456889999999999999999999
Q ss_pred HHHHhhcCCCcEE--EEEcC----CCCccccCCh-HHHHHHHHHHH
Q 021229 260 RRLKSHLGDNAQL--IVIKK----AGHAFNYEKP-KEFYKHLKSFL 298 (315)
Q Consensus 260 ~~l~~~~~~~~~~--~~i~~----~gH~~~~e~p-~~~~~~i~~fl 298 (315)
+.+.+.. .++.+ ..++. .||+-.+-+| |...+.+.+|+
T Consensus 236 d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 236 DAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9998877 45543 44444 5999988777 77777777765
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.3e-10 Score=93.59 Aligned_cols=202 Identities=22% Similarity=0.243 Sum_probs=110.2
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcc-cc---ceEEee--cCCCC----CC-C-CCCCC--------C--CCchhHHHH
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HY---FNVYVP--DLLFF----GD-S-FTTRP--------E--RSESFQAEC 105 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~-~~---~~vi~~--D~~G~----G~-S-~~~~~--------~--~~~~~~a~~ 105 (315)
+..|.|||||++++.. .+..++..+. +. ..++.. +--|+ |. + ....| . .+...++.+
T Consensus 10 ~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 4558999999999874 6888988886 33 344333 22221 21 1 11111 1 123345666
Q ss_pred HHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhh-----hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 106 VMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKE-----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 106 ~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
+..+|..| +++++.+|||||||++++.|+..+.. ++.++|.++++....... . .. .. . .
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~---~-~~-~~---~-~--- 156 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGM---N-DD-QN---Q-N--- 156 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCC---S-C--TT---T-T---
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccc---c-cc-ch---h-h---
Confidence 66666554 78999999999999999999887532 478999887654221100 0 00 00 0 0
Q ss_pred CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC------C
Q 021229 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE------H 250 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~------~ 250 (315)
...... |......| +.+. ... ...+ .-++.+|-|.|. .
T Consensus 157 -------------~~~~~g-----p~~~~~~y-~~l~--------~~~--------~~~~-p~~i~VLnI~G~~~~g~~s 200 (255)
T PF06028_consen 157 -------------DLNKNG-----PKSMTPMY-QDLL--------KNR--------RKNF-PKNIQVLNIYGDLEDGSNS 200 (255)
T ss_dssp --------------CSTT------BSS--HHH-HHHH--------HTH--------GGGS-TTT-EEEEEEEESBTTCSB
T ss_pred -------------hhcccC-----CcccCHHH-HHHH--------HHH--------HhhC-CCCeEEEEEecccCCCCCC
Confidence 000000 11111111 1111 000 0001 124679999998 7
Q ss_pred CCCCchHHHHHHHhhcCCC---cEEEEEcC--CCCccccCChHHHHHHHHHHHh
Q 021229 251 DQIFPLELGRRLKSHLGDN---AQLIVIKK--AGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~~---~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
|..||...++.+...+.+. -+-.++.| +.|.-.-|+| ++.+.|.+||-
T Consensus 201 DG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 201 DGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp TSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 9999999888887776432 34455644 6898888877 77899999984
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.9e-09 Score=96.57 Aligned_cols=122 Identities=19% Similarity=0.199 Sum_probs=79.7
Q ss_pred eeecCC---CceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhH------------------hhccccceEEeecC
Q 021229 28 VTDLQD---GSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNII------------------PHMIHYFNVYVPDL 84 (315)
Q Consensus 28 ~~~~~~---g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~------------------~~l~~~~~vi~~D~ 84 (315)
++++.+ +..++||...+. +.+.|.||+++|.++++.. +.-+. ....+...++.+|+
T Consensus 51 y~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDq 129 (462)
T PTZ00472 51 YFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQ 129 (462)
T ss_pred EEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCcccccccCeEEEeC
Confidence 566643 567888876432 3456888999998766642 32111 01233478999998
Q ss_pred C-CCCCCCCCCCC--CCchhHHHHHHHHHHH-------cCCCceEEEEEchhHHHHHHHHHhhh----------hhhcee
Q 021229 85 L-FFGDSFTTRPE--RSESFQAECVMRVMEA-------HSVKKLSLVGLSYGGFVGYSMAAQFK----------EKIEKV 144 (315)
Q Consensus 85 ~-G~G~S~~~~~~--~~~~~~a~~~~~~l~~-------l~~~~v~lvGhSmGG~ia~~~a~~~p----------~~v~~l 144 (315)
| |+|.|...... .+....++++.++++. +...+++|+||||||..+..+|.+.- -.++++
T Consensus 130 P~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi 209 (462)
T PTZ00472 130 PAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGL 209 (462)
T ss_pred CCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEE
Confidence 6 89988654322 2334557777777763 34578999999999999988887642 135677
Q ss_pred EEeeCC
Q 021229 145 VICCSG 150 (315)
Q Consensus 145 il~~~~ 150 (315)
++-++.
T Consensus 210 ~IGNg~ 215 (462)
T PTZ00472 210 AVGNGL 215 (462)
T ss_pred EEeccc
Confidence 665543
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=78.97 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=54.4
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCC-CCchhHHHHHHHHH
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPE-RSESFQAECVMRVM 110 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~-~~~~~~a~~~~~~l 110 (315)
|..+++....+.++.+.+|+++||++.++. .+..+++.|++. |.|+++|+||||.|...... .+.+.+.+|+..++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~-ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSG-RYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHH-HHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 445666554333334668999999999886 588999998765 99999999999999754322 23445566666665
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-09 Score=82.40 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=107.6
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC--CCceEEEEEchhH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS--VKKLSLVGLSYGG 127 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~--~~~v~lvGhSmGG 127 (315)
+.+|++||++.|..-.|....+.-..+ +-.+++. .+.. ...++.+.++-+++. .++++||+||+|+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~--------~w~~--P~~~dWi~~l~~~v~a~~~~~vlVAHSLGc 70 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN--ARRVEQD--------DWEA--PVLDDWIARLEKEVNAAEGPVVLVAHSLGC 70 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc--chhcccC--------CCCC--CCHHHHHHHHHHHHhccCCCeEEEEecccH
Confidence 468999999877655687665543322 2222321 1111 123445555544443 3459999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
..++.++.+....|+++.|++++-...+.. .. .....|. .
T Consensus 71 ~~v~h~~~~~~~~V~GalLVAppd~~~~~~-----~~---------------------~~~~tf~-~------------- 110 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPPDVSRPEI-----RP---------------------KHLMTFD-P------------- 110 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCCCcccccc-----ch---------------------hhccccC-C-------------
Confidence 999999998877999999986432110000 00 0000000 0
Q ss_pred HHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc---
Q 021229 208 YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY--- 284 (315)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~--- 284 (315)
.....+.-|.+++..++|++++.+.++.+++.. ++.++.+.++||+--.
T Consensus 111 --------------------------~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~ 162 (181)
T COG3545 111 --------------------------IPREPLPFPSVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGF 162 (181)
T ss_pred --------------------------CccccCCCceeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcC
Confidence 011235569999999999999999999999988 4688999999997533
Q ss_pred CChHHHHHHHHHHHhc
Q 021229 285 EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 285 e~p~~~~~~i~~fl~~ 300 (315)
..-.+....+.+|+.+
T Consensus 163 g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 163 GPWPEGYALLAQLLSR 178 (181)
T ss_pred CCcHHHHHHHHHHhhh
Confidence 3334556666666654
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.8e-09 Score=87.68 Aligned_cols=102 Identities=23% Similarity=0.373 Sum_probs=71.1
Q ss_pred CCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH-----c----
Q 021229 44 TRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA-----H---- 113 (315)
Q Consensus 44 ~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~-----l---- 113 (315)
...+.-|.|||+||++....+ +..++.+++.. |-|+.+|+...+.... ......+..+.+++.+ +
T Consensus 12 ~~~g~yPVv~f~~G~~~~~s~-Ys~ll~hvAShGyIVV~~d~~~~~~~~~----~~~~~~~~~vi~Wl~~~L~~~l~~~v 86 (259)
T PF12740_consen 12 SSAGTYPVVLFLHGFLLINSW-YSQLLEHVASHGYIVVAPDLYSIGGPDD----TDEVASAAEVIDWLAKGLESKLPLGV 86 (259)
T ss_pred CCCCCcCEEEEeCCcCCCHHH-HHHHHHHHHhCceEEEEecccccCCCCc----chhHHHHHHHHHHHHhcchhhccccc
Confidence 345678899999999977665 77888888765 9999999765332111 1111122233333321 1
Q ss_pred --CCCceEEEEEchhHHHHHHHHHhh-----hhhhceeEEeeCC
Q 021229 114 --SVKKLSLVGLSYGGFVGYSMAAQF-----KEKIEKVVICCSG 150 (315)
Q Consensus 114 --~~~~v~lvGhSmGG~ia~~~a~~~-----p~~v~~lil~~~~ 150 (315)
+.+++.|.|||-||-+|+.++..+ +.++++++++++.
T Consensus 87 ~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 87 KPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred cccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 456899999999999999999987 5579999998754
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.6e-10 Score=91.46 Aligned_cols=163 Identities=21% Similarity=0.246 Sum_probs=81.7
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhh----ccc-cceEEeecCCC-----CCCCC----------CCCCC-----------
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPH----MIH-YFNVYVPDLLF-----FGDSF----------TTRPE----------- 96 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~----l~~-~~~vi~~D~~G-----~G~S~----------~~~~~----------- 96 (315)
.++.||+|||++.|+. .+..+... |.+ .++++.+|-|- -|-.. ...+.
T Consensus 3 ~k~riLcLHG~~~na~-if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE-IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HH-HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHH-HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 3678999999999987 47655544 445 68888877652 11110 00010
Q ss_pred --CCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh--------hhceeEEeeCCCccCchhhhhhhhccc
Q 021229 97 --RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE--------KIEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 97 --~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
.......+.+.+.+++.|. =.-|+|+|.||.+|..++..... .++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 0011223455666666552 24699999999999998875432 24555555432211000
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
+. + .. .-.+|++|+|.|
T Consensus 151 -------------------------~~-------------~------------------------~~-~~~~i~iPtlHv 167 (212)
T PF03959_consen 151 -------------------------YQ-------------E------------------------LY-DEPKISIPTLHV 167 (212)
T ss_dssp -------------------------GT-------------T------------------------TT---TT---EEEEE
T ss_pred -------------------------hh-------------h------------------------hh-ccccCCCCeEEE
Confidence 00 0 00 124578999999
Q ss_pred EeCCCCCCchHHHHHHHhhcCCC-cEEEEEcCCCCccccCCh
Q 021229 247 WGEHDQIFPLELGRRLKSHLGDN-AQLIVIKKAGHAFNYEKP 287 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~~~-~~~~~i~~~gH~~~~e~p 287 (315)
+|++|.+++++.++.+.+.. .+ .+++..+ +||.++...+
T Consensus 168 ~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 168 IGENDPVVPPERSEALAEMF-DPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp EETT-SSS-HHHHHHHHHHH-HHHEEEEEES-SSSS----HH
T ss_pred EeCCCCCcchHHHHHHHHhc-cCCcEEEEEC-CCCcCcCChh
Confidence 99999999999999999888 34 6666664 6998887543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.7e-09 Score=99.97 Aligned_cols=219 Identities=13% Similarity=0.075 Sum_probs=110.5
Q ss_pred cccceEEeecCCCCCCCCCCCCC--CCchhHHHHHHHHHHHcC-----------------CCceEEEEEchhHHHHHHHH
Q 021229 74 IHYFNVYVPDLLFFGDSFTTRPE--RSESFQAECVMRVMEAHS-----------------VKKLSLVGLSYGGFVGYSMA 134 (315)
Q Consensus 74 ~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~a~~~~~~l~~l~-----------------~~~v~lvGhSmGG~ia~~~a 134 (315)
..+|.|+..|.||.|.|...... ..+.....++.+++.... ..+|.++|.|+||.+++.+|
T Consensus 277 ~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aA 356 (767)
T PRK05371 277 PRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVA 356 (767)
T ss_pred hCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHH
Confidence 34699999999999999764221 122223445666666321 36999999999999999999
Q ss_pred HhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH
Q 021229 135 AQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT 214 (315)
Q Consensus 135 ~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (315)
...|..++.+|.+++...+...-......... ..+.......+.+................. ....+...+..
T Consensus 357 a~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~------~g~~ged~d~l~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~ 429 (767)
T PRK05371 357 TTGVEGLETIIPEAAISSWYDYYRENGLVRAP------GGYQGEDLDVLAELTYSRNLLAGDYLRHNE-ACEKLLAELTA 429 (767)
T ss_pred hhCCCcceEEEeeCCCCcHHHHhhcCCceecc------CCcCCcchhhHHHHhhhcccCcchhhcchH-HHHHHHhhhhh
Confidence 99888899888764432211000000000000 000000001111111000000000000000 00000000000
Q ss_pred HHHHHHHHhhh-ccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCcccc-CChHH
Q 021229 215 EYLEEKRELVR-AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNY-EKPKE 289 (315)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~-e~p~~ 289 (315)
. .......+. .+........+.+|++|+|+|+|..|..++++.+.++.+.+. ...++.+. ..+|.... ..+.+
T Consensus 430 ~-~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d 507 (767)
T PRK05371 430 A-QDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSID 507 (767)
T ss_pred h-hhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHH
Confidence 0 000000000 000111224567899999999999999999877766666552 24566544 56896443 34567
Q ss_pred HHHHHHHHHhcC
Q 021229 290 FYKHLKSFLLDS 301 (315)
Q Consensus 290 ~~~~i~~fl~~~ 301 (315)
+.+.+..|+...
T Consensus 508 ~~e~~~~Wfd~~ 519 (767)
T PRK05371 508 FRDTMNAWFTHK 519 (767)
T ss_pred HHHHHHHHHHhc
Confidence 778888887543
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.9e-08 Score=85.27 Aligned_cols=234 Identities=14% Similarity=0.153 Sum_probs=123.2
Q ss_pred CCCCcEEEEccCCCChhhhHHh--h-H-hhccccceEEeecCCCCCCCCCCCCCC----Cchh----------HHHHHHH
Q 021229 47 DSKPDLVLIHGLGANALWQWTN--I-I-PHMIHYFNVYVPDLLFFGDSFTTRPER----SESF----------QAECVMR 108 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~--~-~-~~l~~~~~vi~~D~~G~G~S~~~~~~~----~~~~----------~a~~~~~ 108 (315)
..+|.+|.+.|-|.+.. |+. + . +.+.++..-+.+..|-||......... +-++ .+..+..
T Consensus 90 ~~rp~~IhLagTGDh~f--~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF--WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccch--hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 34677788889888763 443 3 2 445567888999999999774321111 1111 1234566
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc---cCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC---LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
++++.|..++.+.|.||||.+|...|...|..+..+-.++.... +....+... ..+......+.. ..+.+
T Consensus 168 Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~----i~W~~L~~q~~~---~~~~~ 240 (348)
T PF09752_consen 168 WLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNS----INWDALEKQFED---TVYEE 240 (348)
T ss_pred HHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcC----CCHHHHHHHhcc---cchhh
Confidence 77777999999999999999999999999987665544432211 111111100 000000000000 00000
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccc--ccCCCCeEEEEeCCCCCCchHHHHHHH
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI--DKITQPTLILWGEHDQIFPLELGRRLK 263 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lvi~G~~D~~~~~~~~~~l~ 263 (315)
.....-..... ......-.... ..+....+...+.......++ +.-.-.+++|.+++|.++|......+.
T Consensus 241 ~~~~~~~~~~~-----~~~~~~~~~~~---~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq 312 (348)
T PF09752_consen 241 EISDIPAQNKS-----LPLDSMEERRR---DREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQ 312 (348)
T ss_pred hhcccccCccc-----ccchhhccccc---hHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHH
Confidence 00000000000 00000000000 000000000000000011111 112235888999999999998888999
Q ss_pred hhcCCCcEEEEEcCCCCcc-ccCChHHHHHHHHHHHh
Q 021229 264 SHLGDNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 264 ~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 299 (315)
+.. |++++..+++ ||.. ++-+.+.|.++|.+=++
T Consensus 313 ~~W-PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 313 EIW-PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HhC-CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 988 7999999976 9955 56778888888877443
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-09 Score=87.54 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=54.7
Q ss_pred EEEEccCCCC---hhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHH----HHHHHHH-----cCCCce
Q 021229 52 LVLIHGLGAN---ALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAEC----VMRVMEA-----HSVKKL 118 (315)
Q Consensus 52 vvllHG~~~~---~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~----~~~~l~~-----l~~~~v 118 (315)
||++||.|-. ....|........ .++.|+.+|+|-. |+.......++ +.-++++ .+.+++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccce
Confidence 7899996532 2223333333333 4699999999843 22222222222 2223333 346799
Q ss_pred EEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCC
Q 021229 119 SLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGV 151 (315)
Q Consensus 119 ~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~ 151 (315)
+|+|+|-||.+++.++.+..+. +++++++++..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999999876653 78888887644
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1e-08 Score=87.90 Aligned_cols=120 Identities=19% Similarity=0.164 Sum_probs=75.6
Q ss_pred CCceEEEEEecC---CCCCCCcEEEEccCCCChhhhHHh--hHh--------hccccceEEeecCCCCCCCCCCCCC--C
Q 021229 33 DGSVMHCWVPKT---RNDSKPDLVLIHGLGANALWQWTN--IIP--------HMIHYFNVYVPDLLFFGDSFTTRPE--R 97 (315)
Q Consensus 33 ~g~~~~~~~~~~---~~~~~~~vvllHG~~~~~~~~w~~--~~~--------~l~~~~~vi~~D~~G~G~S~~~~~~--~ 97 (315)
||+++......+ ..+.-|+||..|+++.+....... ..+ ....+|-|+..|.||.|.|...... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 566666543322 344567888889988643111221 111 3345699999999999999764322 2
Q ss_pred CchhHHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 98 SESFQAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
.+.....++.+++....+ .+|.++|.|++|..++.+|...|..+++++...+...
T Consensus 81 ~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 223335567777777754 4899999999999999999988889999887655443
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.02 E-value=2e-09 Score=91.05 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=55.1
Q ss_pred CCCcEEEEccCCCChh-h-hHHhhHhhccc-cceEEeecCC----CCCCCCCCCCCCCchhHHHHHHHHHH---Hc----
Q 021229 48 SKPDLVLIHGLGANAL-W-QWTNIIPHMIH-YFNVYVPDLL----FFGDSFTTRPERSESFQAECVMRVME---AH---- 113 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~-~-~w~~~~~~l~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~a~~~~~~l~---~l---- 113 (315)
....||||-|++..-. . ....+...|.. ++.|+-+-++ |+|.++ ....+++|.++++ ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~S-------L~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSS-------LDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcch-------hhhHHHHHHHHHHHHHHhhccc
Confidence 4457999999875431 1 24456666654 5888877654 566442 2334555555554 33
Q ss_pred -CCCceEEEEEchhHHHHHHHHHhhh-----hhhceeEEeeCCC
Q 021229 114 -SVKKLSLVGLSYGGFVGYSMAAQFK-----EKIEKVVICCSGV 151 (315)
Q Consensus 114 -~~~~v~lvGhSmGG~ia~~~a~~~p-----~~v~~lil~~~~~ 151 (315)
+.++|+|+|||-|..-+++|..+.. ..|.++||-++..
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE--
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCC
Confidence 3579999999999999999988753 4689999886543
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.4e-08 Score=74.52 Aligned_cols=161 Identities=18% Similarity=0.220 Sum_probs=102.9
Q ss_pred CCcEEEEccCCCChh-hhHHhhHhhccc-cceEEeecCCCC-----CCCCCCCCCCC-chhHHHHHHHHHHHcCCCceEE
Q 021229 49 KPDLVLIHGLGANAL-WQWTNIIPHMIH-YFNVYVPDLLFF-----GDSFTTRPERS-ESFQAECVMRVMEAHSVKKLSL 120 (315)
Q Consensus 49 ~~~vvllHG~~~~~~-~~w~~~~~~l~~-~~~vi~~D~~G~-----G~S~~~~~~~~-~~~~a~~~~~~l~~l~~~~v~l 120 (315)
..+|||-||.|.+-+ .....+...++. .+.|..|+++-. |....++...+ ...+...+.++.+.+...+.++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~ 93 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLII 93 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceee
Confidence 347888899876532 235566666654 488888888743 31111222222 2334555666766666678999
Q ss_pred EEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCC
Q 021229 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
-|+||||-++-.++......|.++++++-+.. ++ ..
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfh--pp--------------------------------------GK---- 129 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFH--PP--------------------------------------GK---- 129 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccC--CC--------------------------------------CC----
Confidence 99999999998888776556888877642211 10 00
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
|+.. ..+.+.-+++|+|+.+|+.|.+-..+..-... +++..++++++++.|
T Consensus 130 Pe~~---------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adH 180 (213)
T COG3571 130 PEQL---------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADH 180 (213)
T ss_pred cccc---------------------------hhhhccCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCcc
Confidence 0000 12245678999999999999998766542222 335689999999999
Q ss_pred cc
Q 021229 281 AF 282 (315)
Q Consensus 281 ~~ 282 (315)
..
T Consensus 181 DL 182 (213)
T COG3571 181 DL 182 (213)
T ss_pred cc
Confidence 65
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.7e-08 Score=77.28 Aligned_cols=51 Identities=14% Similarity=0.278 Sum_probs=37.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhcCCCc-EEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHLGDNA-QLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.+++..+.|.+.+...+... + .++ +..+.+|+.|.+. .-++....|.+|++
T Consensus 127 ~~vllq~gDEvLDyr~a~~~---y-~~~y~~~v~~GGdH~f~--~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEE---L-HPYYEIVWDEEQTHKFK--NISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHH---h-ccCceEEEECCCCCCCC--CHHHHHHHHHHHHh
Confidence 58999999999987654433 3 344 7888888888654 45667888889885
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.92 E-value=3e-09 Score=95.99 Aligned_cols=88 Identities=15% Similarity=0.215 Sum_probs=66.7
Q ss_pred hhHHhhHhhccccceEEeecCCCCCCCCCCCCC--CCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhh-
Q 021229 64 WQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE--RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK- 140 (315)
Q Consensus 64 ~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~- 140 (315)
..|..+++.|.+...+...|++|+|.+...... .......+.+.++.+..+.++++|+||||||.++..++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~ 187 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVF 187 (440)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhH
Confidence 469999999988766668999999998654211 11223345555666667888999999999999999999988864
Q ss_pred ---hceeEEeeCCC
Q 021229 141 ---IEKVVICCSGV 151 (315)
Q Consensus 141 ---v~~lil~~~~~ 151 (315)
|+++|.++++.
T Consensus 188 ~k~I~~~I~la~P~ 201 (440)
T PLN02733 188 EKYVNSWIAIAAPF 201 (440)
T ss_pred HhHhccEEEECCCC
Confidence 67888886654
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.4e-08 Score=78.75 Aligned_cols=94 Identities=19% Similarity=0.183 Sum_probs=65.2
Q ss_pred EEccCC--CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHH-HHHHcCCCceEEEEEchhHHHH
Q 021229 54 LIHGLG--ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMR-VMEAHSVKKLSLVGLSYGGFVG 130 (315)
Q Consensus 54 llHG~~--~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~-~l~~l~~~~v~lvGhSmGG~ia 130 (315)
++|+.+ ++. ..|..+...+...++|+++|++|+|.+... .......++...+ +.+..+..+++++||||||.++
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGP-HEYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcH-HHHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445433 344 368899999988899999999999866432 2233333433333 3344456789999999999999
Q ss_pred HHHHHhhh---hhhceeEEeeCC
Q 021229 131 YSMAAQFK---EKIEKVVICCSG 150 (315)
Q Consensus 131 ~~~a~~~p---~~v~~lil~~~~ 150 (315)
...+.+.. ..+.+++++++.
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccC
Confidence 99998754 458888877653
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.2e-07 Score=75.28 Aligned_cols=254 Identities=16% Similarity=0.192 Sum_probs=135.5
Q ss_pred eEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc----ccceEEeecCCCCCCCC---C------CCCCCCchhH
Q 021229 36 VMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI----HYFNVYVPDLLFFGDSF---T------TRPERSESFQ 102 (315)
Q Consensus 36 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~----~~~~vi~~D~~G~G~S~---~------~~~~~~~~~~ 102 (315)
++..|...+ +..++.|++|.|.++...+ +.++...|- ++.++..+--.||-.-. . ..+-.+...+
T Consensus 17 ~~~~~v~~~-~~~~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~Q 94 (301)
T KOG3975|consen 17 TLKPWVTKS-GEDKPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQ 94 (301)
T ss_pred eeeeeeccC-CCCceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhH
Confidence 455565433 2456788999999988764 666655543 33567777777764321 1 1123445566
Q ss_pred HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh-h-hhhceeEEeeCCCc-c-Cchhhhhhhhc-ccchhhhh---
Q 021229 103 AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF-K-EKIEKVVICCSGVC-L-EEQDLRDRMFK-VSDLEEAS--- 172 (315)
Q Consensus 103 a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~-p-~~v~~lil~~~~~~-~-~~~~~~~~~~~-~~~~~~~~--- 172 (315)
.+.-.+++++.- ..|++++|||.|+.+.+.+.... + -.|.+++++-+.+. + +.+.-. .+.. ..-+....
T Consensus 95 V~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~-~~t~~l~~~~hv~~lt 173 (301)
T KOG3975|consen 95 VDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGI-RLTKVLRYLPHVVSLT 173 (301)
T ss_pred HHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCce-Eeeeeeeeehhhhhee
Confidence 777788888763 46899999999999999887632 2 24677776644321 1 000000 0000 00000000
Q ss_pred -hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHH-----HHhhhccCccccccccccCCCCeEEE
Q 021229 173 -KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK-----RELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
..+....+...+.++......-.+ .+..+....+........+.. .++.+- ..+..+.+++-.+-+-+.
T Consensus 174 ~yi~~~~lp~~ir~~Li~~~l~~~n---~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV--~~~d~e~~een~d~l~Fy 248 (301)
T KOG3975|consen 174 SYIYWILLPGFIRFILIKFMLCGSN---GPQEFLSTALFLTHPQVVRNSVGLAAQEMEEV--TTRDIEYCEENLDSLWFY 248 (301)
T ss_pred eeeeeecChHHHHHHHHHHhcccCC---CcHHHHhhHHHhhcHHHHHHHhhhchHHHHHH--HHhHHHHHHhcCcEEEEE
Confidence 001111223333332222211111 122221110000000000000 000000 001122233445678889
Q ss_pred EeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 247 WGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
+|..|.+||.+..+.+++.++ .+.++-+ +++-|.+...+.+..+..+.+.+
T Consensus 249 ygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 249 YGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred ccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999999999999985 2466666 78999999999999988888765
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-07 Score=75.99 Aligned_cols=59 Identities=22% Similarity=0.494 Sum_probs=47.4
Q ss_pred ccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 237 DKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 237 ~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+.+++|.|.|.|+.|.++|...++.|++.+ +++.++.-+ +||+++-.. .+.+.|.+|+.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHP-GGHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecC-CCccCCCch--HHHHHHHHHHH
Confidence 468999999999999999999999999999 677655554 699998755 45566666654
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.8e-08 Score=84.16 Aligned_cols=100 Identities=20% Similarity=0.241 Sum_probs=77.9
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH-cCCCceEEEEEchhHH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA-HSVKKLSLVGLSYGGF 128 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~-l~~~~v~lvGhSmGG~ 128 (315)
|||+++||.++.. +.|.++...+.....|+..+.||+|.-. ....+.+.+++...+.|.. ..-.+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPLLPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccCceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 5899999988876 4788999999989999999999988532 3444555555554444444 4567999999999999
Q ss_pred HHHHHHHhhh---hhhceeEEeeCCCc
Q 021229 129 VGYSMAAQFK---EKIEKVVICCSGVC 152 (315)
Q Consensus 129 ia~~~a~~~p---~~v~~lil~~~~~~ 152 (315)
+|++.|.+.- +.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999863 36889999987665
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.4e-07 Score=80.65 Aligned_cols=126 Identities=20% Similarity=0.221 Sum_probs=87.5
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhh------cc-ccceEEeecCCCCCCCCCC---C
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPH------MI-HYFNVYVPDLLFFGDSFTT---R 94 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~------l~-~~~~vi~~D~~G~G~S~~~---~ 94 (315)
.+..+++.||..+-....+.+.+++|+|+|.||+-+++. .|-...+. |+ ++|.|-.-..||--.|..- .
T Consensus 49 E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~ 127 (403)
T KOG2624|consen 49 EEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLS 127 (403)
T ss_pred EEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcccchhhcccC
Confidence 456788899986666655544477899999999988876 47544322 22 4599999999986666421 1
Q ss_pred C-------CCCchhH-----HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCC
Q 021229 95 P-------ERSESFQ-----AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGV 151 (315)
Q Consensus 95 ~-------~~~~~~~-----a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~ 151 (315)
+ +.+..++ ...+.-+++.-+-++++.||||-|+.+.+......|+ +|+.++++++..
T Consensus 128 ~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 128 PSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred CcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 1 1122222 2334455555578999999999999999999888765 688888887655
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-07 Score=75.46 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=62.4
Q ss_pred CCCcEEEEccCCCChhhhHHh--hHhhcccc--ceEEeecCCCCCCCCC-----CC---CCCCc-hhHHHHHHHHHHHcC
Q 021229 48 SKPDLVLIHGLGANALWQWTN--IIPHMIHY--FNVYVPDLLFFGDSFT-----TR---PERSE-SFQAECVMRVMEAHS 114 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~--~~~~l~~~--~~vi~~D~~G~G~S~~-----~~---~~~~~-~~~a~~~~~~l~~l~ 114 (315)
+.|.||+|||.+.+.. .+.. -...+++. |-|+.|+...-..... .. ....+ ...+..+.++....+
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 3577899999988775 3433 22345443 7778887542111110 00 00011 112333344444444
Q ss_pred --CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 115 --VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 115 --~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
.++|.+.|+|.||+.+..++..+|+.+.++.+++..
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 458999999999999999999999999988776543
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-09 Score=87.24 Aligned_cols=87 Identities=23% Similarity=0.300 Sum_probs=50.3
Q ss_pred CcEEEEccCCCChhhhHHhhHhhcccc-ce---EEeecCCCCCCCCCCCC-C---CCchhHHHHHHHHHHHcCCCceEEE
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHY-FN---VYVPDLLFFGDSFTTRP-E---RSESFQAECVMRVMEAHSVKKLSLV 121 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~-~~---vi~~D~~G~G~S~~~~~-~---~~~~~~a~~~~~~l~~l~~~~v~lv 121 (315)
.||||+||.+.+....|..+.+.|.+. |. |+++++-....+..... . .+....+..|.++++.-|. ||.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 479999999885555799999998764 77 89999843222110000 0 0112234555666666788 99999
Q ss_pred EEchhHHHHHHHHHhh
Q 021229 122 GLSYGGFVGYSMAAQF 137 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~ 137 (315)
||||||+++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999997776543
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.3e-08 Score=77.67 Aligned_cols=200 Identities=15% Similarity=0.143 Sum_probs=111.7
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHH----HH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAEC----VM 107 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~----~~ 107 (315)
..+..|.+ ....+.+|||||.- ++...+...+-+.+..+|+|...++ |.+.. ..+......+ +.
T Consensus 56 q~VDIwg~---~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q---~htL~qt~~~~~~gv~ 126 (270)
T KOG4627|consen 56 QLVDIWGS---TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQ---VHTLEQTMTQFTHGVN 126 (270)
T ss_pred eEEEEecC---CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcc---cccHHHHHHHHHHHHH
Confidence 35666764 34566889999941 1111122334455566799998876 54432 2222222222 22
Q ss_pred HHHHHc-CCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 108 RVMEAH-SVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 108 ~~l~~l-~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
-+++.. +.+++.+-|||.|+.+|+....+. ..+|.++++.++...+ ++
T Consensus 127 filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l------------------------------~E 176 (270)
T KOG4627|consen 127 FILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL------------------------------RE 176 (270)
T ss_pred HHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH------------------------------HH
Confidence 233333 356677789999999988877664 4478888776432211 11
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~ 265 (315)
+....+.+... .. .+- . +. -......+..+++|+|++.|++|.-.-.+..+.++..
T Consensus 177 L~~te~g~dlg---Lt----~~~--------a----e~-----~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q 232 (270)
T KOG4627|consen 177 LSNTESGNDLG---LT----ERN--------A----ES-----VSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQ 232 (270)
T ss_pred HhCCccccccC---cc----cch--------h----hh-----cCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHH
Confidence 10000000000 00 000 0 00 0001223456889999999999965556667777776
Q ss_pred cCCCcEEEEEcCCCCccccCCh----HHHHHHHHHHH
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKP----KEFYKHLKSFL 298 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 298 (315)
+ ..+++..+++.+|+-.+++- ..+...+++|+
T Consensus 233 ~-~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 233 L-RKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred h-hhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 6 46899999999998877654 24445555554
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=6e-07 Score=78.58 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=59.3
Q ss_pred CCCcEEEEccCCC---ChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH----HcC--CCc
Q 021229 48 SKPDLVLIHGLGA---NALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME----AHS--VKK 117 (315)
Q Consensus 48 ~~~~vvllHG~~~---~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~----~l~--~~~ 117 (315)
..|.||++||.|- +....+..+...+. .++.|+.+|+|---+-. .+. ...+ +.....++. +++ .++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~--~p~-~~~d-~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP--FPA-ALED-AYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC--CCc-hHHH-HHHHHHHHHhhhHhhCCCccc
Confidence 4789999999653 22221222333332 45999999998432221 111 1111 222222332 233 578
Q ss_pred eEEEEEchhHHHHHHHHHhhhh----hhceeEEeeCCCc
Q 021229 118 LSLVGLSYGGFVGYSMAAQFKE----KIEKVVICCSGVC 152 (315)
Q Consensus 118 v~lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~~~~ 152 (315)
+.|+|+|.||.+++.++..-.+ .....+++.+...
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 9999999999999999987765 3566677665543
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.7e-09 Score=84.47 Aligned_cols=47 Identities=23% Similarity=0.427 Sum_probs=36.2
Q ss_pred HHHHHHHHHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 104 ECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 104 ~~~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+...+++.... .++|.|+|.|.||-+|+.+|.++| .|+.+|.+++..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 44556666552 368999999999999999999999 799998886543
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.6e-08 Score=88.25 Aligned_cols=167 Identities=20% Similarity=0.299 Sum_probs=103.0
Q ss_pred CCcEEEEccCC-----CChhhhHHhhHhhccccceEEeecCCC-CCC-CCCCCCCCCchhHHHHHHHHHHHcCCCceEEE
Q 021229 49 KPDLVLIHGLG-----ANALWQWTNIIPHMIHYFNVYVPDLLF-FGD-SFTTRPERSESFQAECVMRVMEAHSVKKLSLV 121 (315)
Q Consensus 49 ~~~vvllHG~~-----~~~~~~w~~~~~~l~~~~~vi~~D~~G-~G~-S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lv 121 (315)
.|.++++||.+ .+..|.|..+.....+.-.|.+||++. .|. +-....++..++...-+.++-.++...+++|+
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~IiLv 255 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPIILV 255 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceEEE
Confidence 46778999976 233456777777777778888999973 221 11001111111111112233334556789999
Q ss_pred EEchhHHHHHHHHHhhhh-hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCC
Q 021229 122 GLSYGGFVGYSMAAQFKE-KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
|+|||+.++...+...-+ .|.++|.+. ..+... .++
T Consensus 256 GrsmGAlVachVSpsnsdv~V~~vVCig--ypl~~v-------------------------------------dgp---- 292 (784)
T KOG3253|consen 256 GRSMGALVACHVSPSNSDVEVDAVVCIG--YPLDTV-------------------------------------DGP---- 292 (784)
T ss_pred ecccCceeeEEeccccCCceEEEEEEec--ccccCC-------------------------------------Ccc----
Confidence 999998888777765432 355555432 111100 000
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
..+ ..+.+-.++.|+|+|.|..|..+++...+.+++.+-...+++++.+++|
T Consensus 293 -rgi---------------------------rDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adh 344 (784)
T KOG3253|consen 293 -RGI---------------------------RDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADH 344 (784)
T ss_pred -cCC---------------------------cchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCc
Confidence 000 0112335778999999999999999999999988855689999999999
Q ss_pred ccccCC
Q 021229 281 AFNYEK 286 (315)
Q Consensus 281 ~~~~e~ 286 (315)
.+-.-.
T Consensus 345 smaipk 350 (784)
T KOG3253|consen 345 SMAIPK 350 (784)
T ss_pred cccCCc
Confidence 875533
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.6e-09 Score=90.70 Aligned_cols=102 Identities=21% Similarity=0.281 Sum_probs=59.9
Q ss_pred CCCCCcEEEEccCCCCh-hhhHH-hhHh-hccc---cceEEeecCCCCCCCCCCCCCCCch-----hHHHHHHHHHH---
Q 021229 46 NDSKPDLVLIHGLGANA-LWQWT-NIIP-HMIH---YFNVYVPDLLFFGDSFTTRPERSES-----FQAECVMRVME--- 111 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~-~~~w~-~~~~-~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~-----~~a~~~~~~l~--- 111 (315)
+.++|++|+||||..+. ...|- .++. .+.. ++.||++|+... +. ..+... ..+..+..+++
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~--a~---~~Y~~a~~n~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG--AS---NNYPQAVANTRLVGRQLAKFLSFLI 142 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH--HS---S-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh--cc---ccccchhhhHHHHHHHHHHHHHHHH
Confidence 45788999999998776 32354 3344 3443 599999999521 11 111111 11223333333
Q ss_pred -Hc--CCCceEEEEEchhHHHHHHHHHhhhh--hhceeEEeeCCCc
Q 021229 112 -AH--SVKKLSLVGLSYGGFVGYSMAAQFKE--KIEKVVICCSGVC 152 (315)
Q Consensus 112 -~l--~~~~v~lvGhSmGG~ia~~~a~~~p~--~v~~lil~~~~~~ 152 (315)
.. ..++++|||||+||.||-.++..... +|.+++-++++.+
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 33 36899999999999999999888877 8999998886543
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.6e-07 Score=73.25 Aligned_cols=173 Identities=17% Similarity=0.339 Sum_probs=105.0
Q ss_pred CcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCC--------CCCC-------CC-CCC--CCchhHHHHHHHHH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFF--------GDSF-------TT-RPE--RSESFQAECVMRVM 110 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~--------G~S~-------~~-~~~--~~~~~~a~~~~~~l 110 (315)
.+||++||.|.++. .|.+++..+. ++.+.|+|..|-. +... .. .++ ......++.+..++
T Consensus 4 atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred EEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 47999999999886 6887777664 4577788755421 1110 00 001 11112245566666
Q ss_pred HHc---C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 111 EAH---S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 111 ~~l---~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
++. | .+++.+-|.||||++++..+..+|..+.+++-.++.... .. .
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~-~~----------------------------~ 133 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPR-AS----------------------------I 133 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccccc-ch----------------------------h
Confidence 543 3 357889999999999999999997766655432111000 00 0
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~ 265 (315)
. .+.+ ... . + ..|++..||+.|++||....+..++.
T Consensus 134 ----~---------~~~~------------------------~~~-----~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~ 169 (206)
T KOG2112|consen 134 ----G---------LPGW------------------------LPG-----V-N-YTPILLCHGTADPLVPFRFGEKSAQF 169 (206)
T ss_pred ----h---------ccCC------------------------ccc-----c-C-cchhheecccCCceeehHHHHHHHHH
Confidence 0 0000 000 0 0 57999999999999998765555544
Q ss_pred c---CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 266 L---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 266 ~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+ ...+++..+++.+|... |+++ +.+..|+++
T Consensus 170 l~~~~~~~~f~~y~g~~h~~~---~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 170 LKSLGVRVTFKPYPGLGHSTS---PQEL-DDLKSWIKT 203 (206)
T ss_pred HHHcCCceeeeecCCcccccc---HHHH-HHHHHHHHH
Confidence 3 23489999999999876 4443 455566654
|
|
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.6e-06 Score=82.47 Aligned_cols=227 Identities=20% Similarity=0.259 Sum_probs=128.8
Q ss_pred eeeecCCCceEEEEEecCC---CC-CCCcEEEEccCCCChh------hhHHhhHhhccccceEEeecCCCCCCCCCCC--
Q 021229 27 SVTDLQDGSVMHCWVPKTR---ND-SKPDLVLIHGLGANAL------WQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-- 94 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~---~~-~~~~vvllHG~~~~~~------~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-- 94 (315)
.++.. +|...+++...+. +. +-|.||.+||.+.+.. ..|..++ .-..++-|+.+|.||-|......
T Consensus 501 ~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~-~s~~g~~v~~vd~RGs~~~G~~~~~ 578 (755)
T KOG2100|consen 501 GKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVV-VSSRGFAVLQVDGRGSGGYGWDFRS 578 (755)
T ss_pred EEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHh-hccCCeEEEEEcCCCcCCcchhHHH
Confidence 34555 6777777764431 22 3455567788665321 1343331 12235889999999876443210
Q ss_pred --C----CCCchhHHHHHHHHHHHc--CCCceEEEEEchhHHHHHHHHHhhhhhhce-eEEeeCCCccCchhhhhhhhcc
Q 021229 95 --P----ERSESFQAECVMRVMEAH--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEK-VVICCSGVCLEEQDLRDRMFKV 165 (315)
Q Consensus 95 --~----~~~~~~~a~~~~~~l~~l--~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~-lil~~~~~~~~~~~~~~~~~~~ 165 (315)
+ .....++...+..+++.. +.+++.++|+|.||.+++.++...|+.+-+ .+.+++...+.- .+...
T Consensus 579 ~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~---yds~~-- 653 (755)
T KOG2100|consen 579 ALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY---YDSTY-- 653 (755)
T ss_pred HhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee---ecccc--
Confidence 0 111122223333344333 457899999999999999999999855544 355544322110 00000
Q ss_pred cchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCe-E
Q 021229 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT-L 244 (315)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~-l 244 (315)
. . .+... +......|.+. .....+..++.|. |
T Consensus 654 -------------t----e-----rymg~------p~~~~~~y~e~-------------------~~~~~~~~~~~~~~L 686 (755)
T KOG2100|consen 654 -------------T----E-----RYMGL------PSENDKGYEES-------------------SVSSPANNIKTPKLL 686 (755)
T ss_pred -------------c----H-----hhcCC------Cccccchhhhc-------------------cccchhhhhccCCEE
Confidence 0 0 00010 10000011100 0122344566666 9
Q ss_pred EEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCCh-HHHHHHHHHHHhcCCCCCCC
Q 021229 245 ILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKP-KEFYKHLKSFLLDSQPSPLP 307 (315)
Q Consensus 245 vi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~~~~~~~ 307 (315)
++||+.|.-|..+.+..+.+.+. -..++.++|+.+|.+..-.. ..+...+..|+..+...+..
T Consensus 687 liHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (755)
T KOG2100|consen 687 LIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPVD 753 (755)
T ss_pred EEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCcccC
Confidence 99999999999887777776552 23789999999999987554 57778889999876665543
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.7e-08 Score=78.64 Aligned_cols=99 Identities=20% Similarity=0.401 Sum_probs=66.6
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCch-hHHHHHHHHHH----Hc-----
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSES-FQAECVMRVME----AH----- 113 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~-~~a~~~~~~l~----~l----- 113 (315)
..+.-|.|+|+||+.....+ +.+++.+++.+ |-|+++++-.- . .++...+ ..+..+.+++. .+
T Consensus 42 ~~G~yPVilF~HG~~l~ns~-Ys~lL~HIASHGfIVVAPQl~~~--~---~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V 115 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYNSF-YSQLLAHIASHGFIVVAPQLYTL--F---PPDGQDEIKSAASVINWLPEGLQHVLPENV 115 (307)
T ss_pred cCCCccEEEEeechhhhhHH-HHHHHHHHhhcCeEEEechhhcc--c---CCCchHHHHHHHHHHHHHHhhhhhhCCCCc
Confidence 45667888999999876654 77888888765 99999998531 1 1222211 22333444442 21
Q ss_pred --CCCceEEEEEchhHHHHHHHHHhhhh--hhceeEEeeC
Q 021229 114 --SVKKLSLVGLSYGGFVGYSMAAQFKE--KIEKVVICCS 149 (315)
Q Consensus 114 --~~~~v~lvGhSmGG~ia~~~a~~~p~--~v~~lil~~~ 149 (315)
+++++.|+|||.||-.|..+|..+.. ++.+||-+++
T Consensus 116 ~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDP 155 (307)
T PF07224_consen 116 EANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDP 155 (307)
T ss_pred ccccceEEEeecCCccHHHHHHHhcccccCchhheecccc
Confidence 35799999999999999999997732 3566666554
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-05 Score=70.09 Aligned_cols=102 Identities=18% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCCcEEEEccCCC---C-hhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH------cC
Q 021229 47 DSKPDLVLIHGLGA---N-ALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA------HS 114 (315)
Q Consensus 47 ~~~~~vvllHG~~~---~-~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~------l~ 114 (315)
...|.||++||.|- + ..-.++.+...++. +.-|+.+|+|---+..- |-. .++.-+.+.-+.++ .+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~--Pa~-y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF--PAA-YDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC--Ccc-chHHHHHHHHHHHhHHHHhCCC
Confidence 35678899999652 1 11135555556544 36788999984332211 111 11112222222221 24
Q ss_pred CCceEEEEEchhHHHHHHHHHhhh------hhhceeEEeeCCC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFK------EKIEKVVICCSGV 151 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p------~~v~~lil~~~~~ 151 (315)
.++|.|+|-|-||-||..+|.+.- -++++.|++-+..
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 678999999999999999988753 3578888886654
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.7e-07 Score=71.20 Aligned_cols=151 Identities=23% Similarity=0.404 Sum_probs=96.3
Q ss_pred hhHhhccc-cceEEeecCCCCCCCCCCC--------------CCCCchhHHHHHHHHHHHcC-CCceEEEEEchhHHHHH
Q 021229 68 NIIPHMIH-YFNVYVPDLLFFGDSFTTR--------------PERSESFQAECVMRVMEAHS-VKKLSLVGLSYGGFVGY 131 (315)
Q Consensus 68 ~~~~~l~~-~~~vi~~D~~G~G~S~~~~--------------~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSmGG~ia~ 131 (315)
..+..++. +|.|++||+-. |..-++. ++.... ....+.++|+..+ .+++-++|.+|||.++.
T Consensus 58 ~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~-~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 58 EGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWK-DITAVVKWLKNHGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchh-HHHHHHHHHHHcCCcceeeEEEEeecceEEE
Confidence 34455543 59999999863 4221111 011111 1334566667667 67899999999999988
Q ss_pred HHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHH
Q 021229 132 SMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDA 211 (315)
Q Consensus 132 ~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (315)
.+....| .+.+++.+-+.. .
T Consensus 136 ~~~~~~~-~f~a~v~~hps~------------------------------------------------~----------- 155 (242)
T KOG3043|consen 136 TLSAKDP-EFDAGVSFHPSF------------------------------------------------V----------- 155 (242)
T ss_pred Eeeccch-hheeeeEecCCc------------------------------------------------C-----------
Confidence 8887776 455554321100 0
Q ss_pred HHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCC----cEEEEEcCCCCcccc---
Q 021229 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN----AQLIVIKKAGHAFNY--- 284 (315)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~----~~~~~i~~~gH~~~~--- 284 (315)
....+..+++|+|++.|+.|.++|++....+.+.+..+ .++.++++.+|-+..
T Consensus 156 --------------------d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~ 215 (242)
T KOG3043|consen 156 --------------------DSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRA 215 (242)
T ss_pred --------------------ChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhcc
Confidence 00123467899999999999999999888887776422 469999999997763
Q ss_pred --CChH------HHHHHHHHHHhc
Q 021229 285 --EKPK------EFYKHLKSFLLD 300 (315)
Q Consensus 285 --e~p~------~~~~~i~~fl~~ 300 (315)
+.|+ +-...+.+|+++
T Consensus 216 ~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 216 NISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHH
Confidence 4453 333455566654
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.6e-05 Score=72.47 Aligned_cols=123 Identities=17% Similarity=0.270 Sum_probs=74.2
Q ss_pred eeecC--CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHh-------------------hccccceEEeecC
Q 021229 28 VTDLQ--DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIP-------------------HMIHYFNVYVPDL 84 (315)
Q Consensus 28 ~~~~~--~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~-------------------~l~~~~~vi~~D~ 84 (315)
++.++ .+..++||..... ..+.|.||.+.|.+++++. |..+.+ ...+..+++.+|+
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~ 93 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQ 93 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccccccccccceEEEee
Confidence 45665 5678999976543 3567888999998776653 432211 0122368999997
Q ss_pred C-CCCCCCCCCCCC---CchhHHHHHHHHHHHc-------CCCceEEEEEchhHHHHHHHHHhh----------hhhhce
Q 021229 85 L-FFGDSFTTRPER---SESFQAECVMRVMEAH-------SVKKLSLVGLSYGGFVGYSMAAQF----------KEKIEK 143 (315)
Q Consensus 85 ~-G~G~S~~~~~~~---~~~~~a~~~~~~l~~l-------~~~~v~lvGhSmGG~ia~~~a~~~----------p~~v~~ 143 (315)
| |-|.|....... +....++++.++|+.+ ...+++|.|.|+||.-+-.+|.+. +-.+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 7 899997544332 4455577777766643 345899999999998776666542 123667
Q ss_pred eEEeeCCC
Q 021229 144 VVICCSGV 151 (315)
Q Consensus 144 lil~~~~~ 151 (315)
+++.++..
T Consensus 174 i~IGng~~ 181 (415)
T PF00450_consen 174 IAIGNGWI 181 (415)
T ss_dssp EEEESE-S
T ss_pred ceecCccc
Confidence 77765544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.1e-07 Score=79.31 Aligned_cols=39 Identities=18% Similarity=0.259 Sum_probs=23.5
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCC
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLF 86 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G 86 (315)
++-|.|||-||++++.. .+..+...|+. +|-|+++|.|.
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---S
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCC
Confidence 45678899999999886 47777777765 59999999994
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.3e-06 Score=66.85 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=65.7
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccce------EEeecCCCC----CCCC--CCCC---------CCCchhHHHHHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFN------VYVPDLLFF----GDSF--TTRP---------ERSESFQAECVM 107 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~------vi~~D~~G~----G~S~--~~~~---------~~~~~~~a~~~~ 107 (315)
.-|.+||||.+++++ ....++..+.+.++ ++..|--|- |.=+ ...| ..+...+..++.
T Consensus 45 ~iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 347899999999986 58888888877663 344555441 1000 0111 112223344444
Q ss_pred HHH----HHcCCCceEEEEEchhHHHHHHHHHhhhh-----hhceeEEeeCCC
Q 021229 108 RVM----EAHSVKKLSLVGLSYGGFVGYSMAAQFKE-----KIEKVVICCSGV 151 (315)
Q Consensus 108 ~~l----~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-----~v~~lil~~~~~ 151 (315)
.+| ++.+++++.+|||||||.-...|+..+.. .++++|.++++.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 444 45579999999999999999999887643 377888776543
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-07 Score=75.25 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=62.4
Q ss_pred CCCCcEEEEccCCCChhh---hHHhhHhhccccceEEeecCCCCCCCCC-CCCCCCchhHHHHHHHHHHHc----CCCce
Q 021229 47 DSKPDLVLIHGLGANALW---QWTNIIPHMIHYFNVYVPDLLFFGDSFT-TRPERSESFQAECVMRVMEAH----SVKKL 118 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~---~w~~~~~~l~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~a~~~~~~l~~l----~~~~v 118 (315)
+++..+|||||+..+... ...++...+.-...++.+.+|+.|.-.. .....+....+..+.++++.+ +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 346689999999876321 1222233333235899999998775321 011111222344455555543 57899
Q ss_pred EEEEEchhHHHHHHHHHhhh---------hhhceeEEeeC
Q 021229 119 SLVGLSYGGFVGYSMAAQFK---------EKIEKVVICCS 149 (315)
Q Consensus 119 ~lvGhSmGG~ia~~~a~~~p---------~~v~~lil~~~ 149 (315)
+|++||||+.+.++...... .++..++|+++
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 99999999999988865421 25667777654
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-05 Score=71.93 Aligned_cols=101 Identities=19% Similarity=0.251 Sum_probs=62.9
Q ss_pred CCCCcEEEE-----ccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH----cC-CC
Q 021229 47 DSKPDLVLI-----HGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA----HS-VK 116 (315)
Q Consensus 47 ~~~~~vvll-----HG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~----l~-~~ 116 (315)
..+.|+|.| ||-|-...-.=..+--.|..++.|+.+... ..+.+..+..+......++++. .. ..
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~ 140 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKPDSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAP 140 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCcccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCC
Confidence 345567666 443222211112334456667888776653 1234556655433333344433 32 34
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
|++|+|.+-||+.++.+|+.+|+++..+|+..+++.
T Consensus 141 kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 141 KPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred CceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 899999999999999999999999999998766654
|
Their function is unknown. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.40 E-value=7.2e-07 Score=78.51 Aligned_cols=100 Identities=22% Similarity=0.207 Sum_probs=70.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcccc-ce---EEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHY-FN---VYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~---vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
.-++|++||++.+.. .|..+...+... +. ++++++++- +...+...........+.+.+...+.+++.|+|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 348999999866654 577666665543 44 778888753 11111122223334556777777888999999999
Q ss_pred hhHHHHHHHHHhhh--hhhceeEEeeCCC
Q 021229 125 YGGFVGYSMAAQFK--EKIEKVVICCSGV 151 (315)
Q Consensus 125 mGG~ia~~~a~~~p--~~v~~lil~~~~~ 151 (315)
|||.++..++..++ .+|++++.++++-
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999999888 7899998886543
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.36 E-value=6e-07 Score=74.10 Aligned_cols=85 Identities=18% Similarity=0.211 Sum_probs=45.5
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc---cceEEeecCCCCCCCCCCCCCCCchh----HHHHHHHHHHHcCC--CceE
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH---YFNVYVPDLLFFGDSFTTRPERSESF----QAECVMRVMEAHSV--KKLS 119 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~----~a~~~~~~l~~l~~--~~v~ 119 (315)
.--|||+||+.++.. .|..+...+.. .+.-..+...++.... ......... .++++.+.++.... .+++
T Consensus 4 ~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 346899999998875 57666555544 2221122222211111 111112222 23444444444443 4899
Q ss_pred EEEEchhHHHHHHHHH
Q 021229 120 LVGLSYGGFVGYSMAA 135 (315)
Q Consensus 120 lvGhSmGG~ia~~~a~ 135 (315)
+|||||||.|+-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999865544
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=98.36 E-value=6.7e-06 Score=71.73 Aligned_cols=101 Identities=19% Similarity=0.261 Sum_probs=52.5
Q ss_pred CCCCCcEEEEccCCCChhh---hHH--------------hhHhhccc-cceEEeecCCCCCCCCCCCCC---CCch--hH
Q 021229 46 NDSKPDLVLIHGLGANALW---QWT--------------NIIPHMIH-YFNVYVPDLLFFGDSFTTRPE---RSES--FQ 102 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~---~w~--------------~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~---~~~~--~~ 102 (315)
.+.-|.||++||-|..... .+. .+...|++ +|-|+++|.+|+|+....... ...+ ..
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 4556799999997665421 010 12333444 499999999999987532211 1111 11
Q ss_pred H---------------HH---HHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEe
Q 021229 103 A---------------EC---VMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC 147 (315)
Q Consensus 103 a---------------~~---~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~ 147 (315)
+ -+ +.++|..+ +.++|.++|+||||..++.+|+.- ++|+..|..
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~ 256 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVAN 256 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhh
Confidence 1 11 22333333 246899999999999999999876 478776654
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.9e-06 Score=66.94 Aligned_cols=94 Identities=20% Similarity=0.159 Sum_probs=59.4
Q ss_pred cEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH----HHcCCCceEEEEEch
Q 021229 51 DLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM----EAHSVKKLSLVGLSY 125 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l----~~l~~~~v~lvGhSm 125 (315)
-+||+-|=|+-... =..+...|++ ++.|+-+|-+-|=-+. .+....+.++.+++ +..+.++++|+|.|+
T Consensus 4 ~~v~~SGDgGw~~~-d~~~a~~l~~~G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL-DKQIAEALAKQGVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhh-hHHHHHHHHHCCCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 46777774442221 2245566654 4999999976443331 22233455555555 455789999999999
Q ss_pred hHHHHHHHHHhhhh----hhceeEEeeCC
Q 021229 126 GGFVGYSMAAQFKE----KIEKVVICCSG 150 (315)
Q Consensus 126 GG~ia~~~a~~~p~----~v~~lil~~~~ 150 (315)
|+-+.-....+.|. +|..++|+++.
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99777777666665 56777777543
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.7e-06 Score=73.15 Aligned_cols=50 Identities=18% Similarity=0.332 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHc-CCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 102 QAECVMRVMEAH-SVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 102 ~a~~~~~~l~~l-~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
..++|..++++. ... +..|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 455566666543 322 26899999999999999999999999999887543
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.3e-06 Score=72.41 Aligned_cols=91 Identities=20% Similarity=0.301 Sum_probs=57.7
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCC--CCCCCCCCC---CC-------chhHHHHHHHHHH---
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFF--GDSFTTRPE---RS-------ESFQAECVMRVME--- 111 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~--G~S~~~~~~---~~-------~~~~a~~~~~~l~--- 111 (315)
..|.|||-||.|+... .+..+.+.+++. |-|.++|.+|- |........ +. ..+....+..+++
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4567788899998864 577788888764 99999999972 333211100 11 0011111222222
Q ss_pred ------HcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 112 ------AHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 112 ------~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
.++..+|.++|||+||..+++++.-..+
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhcccccc
Confidence 2345689999999999999999876543
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.9e-06 Score=69.69 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCCcEEEEccCCCChh---hhHHhhHhhccccceEEeecCCCCCCCC-----CCCCCCCchhHHHHHHHHHHHcCCCceE
Q 021229 48 SKPDLVLIHGLGANAL---WQWTNIIPHMIHYFNVYVPDLLFFGDSF-----TTRPERSESFQAECVMRVMEAHSVKKLS 119 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~---~~w~~~~~~l~~~~~vi~~D~~G~G~S~-----~~~~~~~~~~~a~~~~~~l~~l~~~~v~ 119 (315)
.+..+||+||+.-+-. +...++..........+.+.+|.-|.-. ..+..++-..++..+..+.+....++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 4567899999865421 1233334444445788899999655321 1111222222233333333444578999
Q ss_pred EEEEchhHHHHHHHHHh--------hhhhhceeEEeeC
Q 021229 120 LVGLSYGGFVGYSMAAQ--------FKEKIEKVVICCS 149 (315)
Q Consensus 120 lvGhSmGG~ia~~~a~~--------~p~~v~~lil~~~ 149 (315)
|++||||..+.++...+ .+.+++.+||.++
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 99999999999988664 3445667776543
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.3e-05 Score=72.51 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=60.2
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcc-cc----ceEEeecCCCCCCCCCCCC--CCCchhHHHHHHHHHHHc-----C
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMI-HY----FNVYVPDLLFFGDSFTTRP--ERSESFQAECVMRVMEAH-----S 114 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~----~~vi~~D~~G~G~S~~~~~--~~~~~~~a~~~~~~l~~l-----~ 114 (315)
...|.|+|+||-.-.....-...+..+. .+ .-++.+|..+-.......+ .....+..+++.-++++. +
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3457888999943111000112233332 22 3457777532111111111 111223455666666654 3
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
.++.+|+|+||||..|+.++.++|+.+.+++.+++.
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 457899999999999999999999999999888654
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-05 Score=65.23 Aligned_cols=117 Identities=19% Similarity=0.310 Sum_probs=73.2
Q ss_pred CCceEEEEEecC-C-CCCCCcEEEEccCCCChh-----hhHHhhHhhccccceEEeecCC-------CCCCCCCCCCCCC
Q 021229 33 DGSVMHCWVPKT-R-NDSKPDLVLIHGLGANAL-----WQWTNIIPHMIHYFNVYVPDLL-------FFGDSFTTRPERS 98 (315)
Q Consensus 33 ~g~~~~~~~~~~-~-~~~~~~vvllHG~~~~~~-----~~w~~~~~~l~~~~~vi~~D~~-------G~G~S~~~~~~~~ 98 (315)
+|...+||...+ + +.+.|.||.|||-+.+.. ..|+.+.+. ..|-|+.||-- +.|.+..+.....
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~ 120 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWNANGCGNWFGPADRRR 120 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccCCCcccccCCcccccC
Confidence 566666665432 2 334467889999776653 134444433 24888888532 2223321111011
Q ss_pred ----chhHHHHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 99 ----ESFQAECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 99 ----~~~~a~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
..+..+.+..++.+.+++ +|.+.|.|-||.++..++..+|+.+.++.++++..
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 112344455566666776 89999999999999999999999999888876544
|
|
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.7e-05 Score=65.50 Aligned_cols=42 Identities=24% Similarity=0.282 Sum_probs=31.0
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFG 88 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G 88 (315)
+++-|.|||-||+|++... +..+.-.|+. +|-|.++..|-+.
T Consensus 115 ~~k~PvvvFSHGLggsRt~-YSa~c~~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTL-YSAYCTSLASHGFVVAAVEHRDRS 157 (399)
T ss_pred CCCccEEEEecccccchhh-HHHHhhhHhhCceEEEEeecccCc
Confidence 3456788999999998864 6666666655 4888899888544
|
|
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.17 E-value=9.7e-06 Score=68.94 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=64.9
Q ss_pred cEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH-HHcC--CCceEEEEEchhH
Q 021229 51 DLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM-EAHS--VKKLSLVGLSYGG 127 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l-~~l~--~~~v~lvGhSmGG 127 (315)
-|++.-|..+=. .-.-+...+.-+|.|+-++.||++.|...+-.......++.+.++. +.++ .++++|.|||.||
T Consensus 245 LvIC~EGNAGFY--EvG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGG 322 (517)
T KOG1553|consen 245 LVICFEGNAGFY--EVGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGG 322 (517)
T ss_pred EEEEecCCccce--EeeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCC
Confidence 456666643211 0111233455579999999999999976543333333355555544 5565 4789999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeC
Q 021229 128 FVGYSMAAQFKEKIEKVVICCS 149 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~ 149 (315)
.-+..+|..+|+ |+++||-.+
T Consensus 323 F~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 323 FPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred chHHHHhhcCCC-ceEEEeecc
Confidence 999999999996 888887543
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=57.90 Aligned_cols=61 Identities=30% Similarity=0.500 Sum_probs=54.4
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
..|+|+|.++.|+++|.+.++.+++.+ ++++++.+++.||......-.-+.+++.+||.+.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 589999999999999999999999999 6799999999999998644567889999999843
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.3e-05 Score=65.49 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=61.2
Q ss_pred CCceEEEEEec-CCCCCCCcEEEEccCCCChhh--hH---HhhHhhcc--ccceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 33 DGSVMHCWVPK-TRNDSKPDLVLIHGLGANALW--QW---TNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 33 ~g~~~~~~~~~-~~~~~~~~vvllHG~~~~~~~--~w---~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
|+..+...... +.......||+.-|.++.-+. .. +..+..++ .+.+|+.+.+||.|.|.............+
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~ 199 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQ 199 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHH
Confidence 66655554322 223345599999997764332 10 01122232 247999999999999964332111111123
Q ss_pred HHHHHHHH--cC--CCceEEEEEchhHHHHHHHHHhh
Q 021229 105 CVMRVMEA--HS--VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 105 ~~~~~l~~--l~--~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.+.+.+++ .| .+++++-|||+||.++.+...++
T Consensus 200 a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 200 ACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 34444432 23 37899999999999998866554
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.1e-05 Score=64.23 Aligned_cols=62 Identities=21% Similarity=0.198 Sum_probs=43.2
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhc---C-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHL---G-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
-++|+++.+|..|.++|....+.+.+.+ + .+.++..+++.+|....-. -.....+||.+.++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 3689999999999999998887776654 2 3567888889999764311 11233366665544
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.09 E-value=4e-05 Score=67.50 Aligned_cols=166 Identities=17% Similarity=0.239 Sum_probs=98.4
Q ss_pred HHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 105 CVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 105 ~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
.+.++++.. .++++++.|.|==|..++..|+ ...||++++=+.-...-.... +......+.+.++.
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~----------l~h~y~~yG~~ws~ 226 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKAN----------LEHQYRSYGGNWSF 226 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHH----------HHHHHHHhCCCCcc
Confidence 344555555 6899999999999999999998 556888886432111000000 01111111112222
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
.+..+....+. +.+..........+ -+......++++|.++|.|..|.+..++....
T Consensus 227 a~~dY~~~gi~-----------------~~l~tp~f~~L~~i------vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~ 283 (367)
T PF10142_consen 227 AFQDYYNEGIT-----------------QQLDTPEFDKLMQI------VDPYSYRDRLTMPKYIINATGDEFFVPDSSNF 283 (367)
T ss_pred chhhhhHhCch-----------------hhcCCHHHHHHHHh------cCHHHHHHhcCccEEEEecCCCceeccCchHH
Confidence 22221111110 00000001111111 11223345779999999999999999999999
Q ss_pred HHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC-CCCCCC
Q 021229 262 LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS-QPSPLP 307 (315)
Q Consensus 262 l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~-~~~~~~ 307 (315)
+...++....+..+|+++|.... ..+...|..|+... .+.+.|
T Consensus 284 y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 284 YYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred HHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcCCCCC
Confidence 99998656789999999998876 67778888888763 334444
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.2e-05 Score=64.46 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=47.7
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcc-ccCChHHHHHHHHHHHhcC
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~ 301 (315)
++++.+++|..+|......+.+.. |++++..++ +||.. .+-+-+.|-++|.+-|.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC-CCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 677889999999998888888888 799999997 69955 5567789999999887643
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.1e-05 Score=60.10 Aligned_cols=77 Identities=13% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccce-EEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFN-VYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGG 127 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG 127 (315)
+..|||+-|||++... +.++. +..++. ++++|++-.- .+ . +-.+.+++.||+||||=
T Consensus 11 ~~LilfF~GWg~d~~~-f~hL~--~~~~~D~l~~yDYr~l~------~d----~---------~~~~y~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSP-FSHLI--LPENYDVLICYDYRDLD------FD----F---------DLSGYREIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHH-hhhcc--CCCCccEEEEecCcccc------cc----c---------ccccCceEEEEEEeHHH
Confidence 4578999999998753 44432 123454 4578886211 11 0 11246789999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeC
Q 021229 128 FVGYSMAAQFKEKIEKVVICCS 149 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~ 149 (315)
.+|..+.... .+.+.|.+++
T Consensus 69 w~A~~~l~~~--~~~~aiAING 88 (213)
T PF04301_consen 69 WAANRVLQGI--PFKRAIAING 88 (213)
T ss_pred HHHHHHhccC--CcceeEEEEC
Confidence 9998875544 3566666654
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00012 Score=67.36 Aligned_cols=205 Identities=16% Similarity=0.187 Sum_probs=114.4
Q ss_pred CCCCcEEEEccCCCCh----hhhHHhhH--hhcc-ccceEEeecCCCCCCCCCC-------CCCC-CchhHHHHHHHHHH
Q 021229 47 DSKPDLVLIHGLGANA----LWQWTNII--PHMI-HYFNVYVPDLLFFGDSFTT-------RPER-SESFQAECVMRVME 111 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~----~~~w~~~~--~~l~-~~~~vi~~D~~G~G~S~~~-------~~~~-~~~~~a~~~~~~l~ 111 (315)
.+-|+++++=|.+.-. .|.|-..+ ..|+ .+|-|+++|.||--...-. ...+ -..++++-+.-+.+
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 3468999998865422 23343333 2333 4599999999985433211 1111 12234444444555
Q ss_pred HcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 112 AHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 112 ~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
..| .++|.+-|||.||.+++....++|+-++.+|. .++ .......+. ....+
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA-Gap--VT~W~~YDT-------------------gYTER--- 774 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA-GAP--VTDWRLYDT-------------------GYTER--- 774 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEec-cCc--ceeeeeecc-------------------cchhh---
Confidence 553 57899999999999999999999987666552 111 111100000 00001
Q ss_pred hhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc--
Q 021229 189 YTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL-- 266 (315)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~-- 266 (315)
++.. |+.--..|.. .+. .. ..+.++.=..-.|++||--|.-|-..+.-.+...+
T Consensus 775 --YMg~------P~~nE~gY~a----gSV---~~---------~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvk 830 (867)
T KOG2281|consen 775 --YMGY------PDNNEHGYGA----GSV---AG---------HVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVK 830 (867)
T ss_pred --hcCC------Cccchhcccc----hhH---HH---------HHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHh
Confidence 1111 1000000100 000 00 01122333345899999999988766554454333
Q ss_pred -CCCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhc
Q 021229 267 -GDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 267 -~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 300 (315)
++.-++.++|+--|.+-- |.-.-+...|..||++
T Consensus 831 agKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 831 AGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 245799999999999854 5556777788899875
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00013 Score=61.25 Aligned_cols=61 Identities=15% Similarity=0.317 Sum_probs=50.2
Q ss_pred cCCCCeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-CChHHHHHHHHHHH
Q 021229 238 KITQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFL 298 (315)
Q Consensus 238 ~i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 298 (315)
...+|.|+|+++.|.+++.+..+...+.. +-+.+...++++.|.-++ ++|+++.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 45689999999999999998777766543 234778889999998877 78999999999985
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.02 E-value=7.5e-05 Score=62.50 Aligned_cols=40 Identities=25% Similarity=0.531 Sum_probs=34.5
Q ss_pred HHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 111 EAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 111 ~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
++.++ .++.++|.|+||+-++.++.++|+.+.+.++++++
T Consensus 262 s~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 262 STYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred hccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 44454 57999999999999999999999999999988654
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00013 Score=63.45 Aligned_cols=122 Identities=12% Similarity=0.174 Sum_probs=75.5
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc----c-cceEEeecCCC--CCCCC--------
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI----H-YFNVYVPDLLF--FGDSF-------- 91 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~----~-~~~vi~~D~~G--~G~S~-------- 91 (315)
+++...+...+..|.....+.....||+|||.|.+.. |...+..|. + ++..+++.+|. ...+.
T Consensus 65 ~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d--~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~ 142 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPD--WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEE 142 (310)
T ss_pred EEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCC--cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCC
Confidence 3455555556777775443444458999999999874 666555543 2 37777776664 11000
Q ss_pred ------C--CCCC-----------CCchhH-------HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh-hhcee
Q 021229 92 ------T--TRPE-----------RSESFQ-------AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE-KIEKV 144 (315)
Q Consensus 92 ------~--~~~~-----------~~~~~~-------a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-~v~~l 144 (315)
. ..+. .....+ .+....++...+.++++||||+.|+..++.+....+. .+.++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daL 222 (310)
T PF12048_consen 143 VPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDAL 222 (310)
T ss_pred CCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeE
Confidence 0 0000 000011 1234445556677789999999999999999998864 58999
Q ss_pred EEeeCC
Q 021229 145 VICCSG 150 (315)
Q Consensus 145 il~~~~ 150 (315)
|++++-
T Consensus 223 V~I~a~ 228 (310)
T PF12048_consen 223 VLINAY 228 (310)
T ss_pred EEEeCC
Confidence 998753
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.5e-06 Score=71.36 Aligned_cols=67 Identities=27% Similarity=0.519 Sum_probs=53.3
Q ss_pred ccccCC-CCeEEEEeCCCCCCchHHHHHHHhhcCC-CcEEEEEcCCCCccccCChH---HHHHHHHHHHhcC
Q 021229 235 NIDKIT-QPTLILWGEHDQIFPLELGRRLKSHLGD-NAQLIVIKKAGHAFNYEKPK---EFYKHLKSFLLDS 301 (315)
Q Consensus 235 ~l~~i~-~P~lvi~G~~D~~~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 301 (315)
.+.++. .|+|+++|+.|.++|...++.+.+.... ..+...+++++|......+. +..+.+.+|+.+.
T Consensus 226 ~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 226 DAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 344555 7999999999999999988888877644 46788899999998875544 6778888888754
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.8e-05 Score=70.83 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=22.4
Q ss_pred CceEEEEEchhHHHHHHHHHhhhh----hhceeEEeeC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKE----KIEKVVICCS 149 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~ 149 (315)
+.|+||||||||.+|...+. +|. .|.-++..++
T Consensus 182 ~sVILVGHSMGGiVAra~~t-lkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 182 HSVILVGHSMGGIVARATLT-LKNEVQGSVNTIITLSS 218 (973)
T ss_pred ceEEEEeccchhHHHHHHHh-hhhhccchhhhhhhhcC
Confidence 35999999999999977655 443 3444444443
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00011 Score=68.52 Aligned_cols=118 Identities=18% Similarity=0.137 Sum_probs=67.6
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCC----ChhhhHHhhHhhccccceEEeecCC----CCCCCCCCC--CCCCch
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGA----NALWQWTNIIPHMIHYFNVYVPDLL----FFGDSFTTR--PERSES 100 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~----~~~~~w~~~~~~l~~~~~vi~~D~~----G~G~S~~~~--~~~~~~ 100 (315)
|-..+++|.+... ..+.|.||+|||.+. ........++.... .+-|+.+++| |+..+.... .+.-..
T Consensus 77 dcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~ 155 (493)
T cd00312 77 DCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLK 155 (493)
T ss_pred cCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHH
Confidence 3357788876422 345688999999532 21111112222111 3788999999 333332111 111111
Q ss_pred hH---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeCCC
Q 021229 101 FQ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCSGV 151 (315)
Q Consensus 101 ~~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~~~ 151 (315)
++ .+++.+-++.+| .++|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 156 D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 156 DQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 21 233444455555 4689999999999998888775 345688888886543
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00024 Score=65.50 Aligned_cols=126 Identities=17% Similarity=0.127 Sum_probs=85.3
Q ss_pred eeeecCCCceEEEEEecC-CCCCCCcEEEEc--cCCCChhhhH--HhhHh----hccccceEEeecCCCCCCCCCCC-CC
Q 021229 27 SVTDLQDGSVMHCWVPKT-RNDSKPDLVLIH--GLGANALWQW--TNIIP----HMIHYFNVYVPDLLFFGDSFTTR-PE 96 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~-~~~~~~~vvllH--G~~~~~~~~w--~~~~~----~l~~~~~vi~~D~~G~G~S~~~~-~~ 96 (315)
..+...||++++.-...+ +.++.|.++..+ -..-+....+ ....+ ..+.+|.|+..|.||.|.|.... +.
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 467778999887644332 345566777777 2221100011 11233 23456999999999999998653 33
Q ss_pred CC-chhHHHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 97 RS-ESFQAECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 97 ~~-~~~~a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
.+ +....-++.+++..+. ..+|..+|.|++|...+.+|+..|..++.++-..+...
T Consensus 102 ~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 102 SSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 34 3344567888888775 46899999999999999999999888888886655543
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.1e-05 Score=56.68 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=56.6
Q ss_pred EEEEccCCCChhhhHHhh--HhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHH
Q 021229 52 LVLIHGLGANALWQWTNI--IPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFV 129 (315)
Q Consensus 52 vvllHG~~~~~~~~w~~~--~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~i 129 (315)
||.||||-++.. ....+ .+.+.+ |.|-.+.|. +.+.......++.+..++..++.+...|||.|+||..
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~-------~~~~i~y~~-p~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDE-------DVRDIEYST-PHLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhc-------cccceeeec-CCCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999977653 23222 223332 333333332 2233344456778889999998888999999999999
Q ss_pred HHHHHHhhhhhhceeEEeeCCC
Q 021229 130 GYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~ 151 (315)
|..++.++- +++++ ++++.
T Consensus 73 At~l~~~~G--irav~-~NPav 91 (191)
T COG3150 73 ATWLGFLCG--IRAVV-FNPAV 91 (191)
T ss_pred HHHHHHHhC--Chhhh-cCCCc
Confidence 999998873 45443 44443
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0013 Score=53.01 Aligned_cols=94 Identities=21% Similarity=0.184 Sum_probs=62.0
Q ss_pred CCcEEEEccCCCChhh--hHHhhHhhccc-cceEEeecCC----CCCCCCCCCCCCCchhHHHHHHHHHHHcCC----Cc
Q 021229 49 KPDLVLIHGLGANALW--QWTNIIPHMIH-YFNVYVPDLL----FFGDSFTTRPERSESFQAECVMRVMEAHSV----KK 117 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~--~w~~~~~~l~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~----~~ 117 (315)
+..||||-|+|..--. .-..+...|.+ .+.++-+-++ |+|.+ +....++++..++++++. ++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~-------slk~D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF-------SLKDDVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc-------cccccHHHHHHHHHHhhccCcccc
Confidence 3578999888764321 12233444433 4888877665 45544 333457888999998753 48
Q ss_pred eEEEEEchhHHHHHHHHHh--hhhhhceeEEeeC
Q 021229 118 LSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCS 149 (315)
Q Consensus 118 v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~ 149 (315)
|+|+|||-|..=.+.|... .|..++..|+..+
T Consensus 109 vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred eEEEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 9999999999888888743 4667777776544
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00033 Score=63.01 Aligned_cols=118 Identities=18% Similarity=0.168 Sum_probs=70.5
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCC---ChhhhHHhhHhhccc-c-ceEEeecCCC--CCC---C-CC----CCCCC
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGA---NALWQWTNIIPHMIH-Y-FNVYVPDLLF--FGD---S-FT----TRPER 97 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~---~~~~~w~~~~~~l~~-~-~~vi~~D~~G--~G~---S-~~----~~~~~ 97 (315)
|...++.|.+.....+.|.+|+|||.+. +....+..-. .|++ + .-|+.+++|- +|. | .. ...+.
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs-~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~ 156 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGS-ALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNL 156 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChH-HHHhcCCEEEEEeCcccccceeeehhhccccccccccc
Confidence 4468899987534455689999999532 2211232222 3333 3 6677777771 221 1 11 11111
Q ss_pred CchhH---HHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCc
Q 021229 98 SESFQ---AECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVC 152 (315)
Q Consensus 98 ~~~~~---a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~ 152 (315)
-..++ .+++.+-|+++|. ++|.|+|+|.||+.++.+.+. |. .+.++|+.+++..
T Consensus 157 Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 157 GLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 11221 4567788888874 579999999999998887653 43 5778888776553
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0007 Score=57.67 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=57.8
Q ss_pred CCcEEEEccCC--CChhhhHHhhHhhcc--ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH---cCCCceEEE
Q 021229 49 KPDLVLIHGLG--ANALWQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA---HSVKKLSLV 121 (315)
Q Consensus 49 ~~~vvllHG~~--~~~~~~w~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~---l~~~~v~lv 121 (315)
..|||+.||+| ++.. .+..+.+.+. ..+.+.++-. |-|.. ..-......+++.+.+-+.. +. +-+++|
T Consensus 26 ~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~i-g~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~-~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVEI-GNGVQ--DSLFMPLRQQASIACEKIKQMKELS-EGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEEE-CCCcc--cccccCHHHHHHHHHHHHhcchhhc-CceEEE
Confidence 45899999998 4433 4556666554 2444444432 21210 11112222334433333332 22 349999
Q ss_pred EEchhHHHHHHHHHhhhh--hhceeEEeeC
Q 021229 122 GLSYGGFVGYSMAAQFKE--KIEKVVICCS 149 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~--~v~~lil~~~ 149 (315)
|+|-||.++=.++.++|+ .|+.+|-+++
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 999999999999999987 4999988764
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00014 Score=65.60 Aligned_cols=80 Identities=15% Similarity=0.264 Sum_probs=51.2
Q ss_pred hHHhhHhhcccc-c----eEE--eecCCCCCCCCCCCCCCCchhHHHHHHHHHHH---cCCCceEEEEEchhHHHHHHHH
Q 021229 65 QWTNIIPHMIHY-F----NVY--VPDLLFFGDSFTTRPERSESFQAECVMRVMEA---HSVKKLSLVGLSYGGFVGYSMA 134 (315)
Q Consensus 65 ~w~~~~~~l~~~-~----~vi--~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a 134 (315)
.|..+++.|.+. | .+. -+|+|- .+. ........+..+++. ...+||+||||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~-------~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL-------SPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh-------chh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 588999988752 2 222 368762 111 111222333333332 2368999999999999999998
Q ss_pred Hhhhh------hhceeEEeeCCCc
Q 021229 135 AQFKE------KIEKVVICCSGVC 152 (315)
Q Consensus 135 ~~~p~------~v~~lil~~~~~~ 152 (315)
...+. .|+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 88743 5899998876543
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00099 Score=56.83 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=58.6
Q ss_pred CCcEEEEccCCCChhh-hHHhhHhhcc--ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH---cCCCceEEEE
Q 021229 49 KPDLVLIHGLGANALW-QWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA---HSVKKLSLVG 122 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~-~w~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~---l~~~~v~lvG 122 (315)
..|+|+.||+|.+..- ....+.+.+. .+..++++.. |.+....-......+++.+.+-+.. +. +-+++||
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEEE
Confidence 4589999999875421 2233333332 2355666654 4442111122223344443333332 22 3499999
Q ss_pred EchhHHHHHHHHHhhhh--hhceeEEeeC
Q 021229 123 LSYGGFVGYSMAAQFKE--KIEKVVICCS 149 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~--~v~~lil~~~ 149 (315)
+|-||.++=.++.+.|+ .|+.+|-+++
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 99999999999999987 5999988764
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0031 Score=55.59 Aligned_cols=105 Identities=20% Similarity=0.166 Sum_probs=60.5
Q ss_pred CCCcEEEEccCCCChhh-----h-HHhhHhhccccceEEeecCCCCCCCCCC-CCCCCchhHHHHHHHHHHHcCCCceEE
Q 021229 48 SKPDLVLIHGLGANALW-----Q-WTNIIPHMIHYFNVYVPDLLFFGDSFTT-RPERSESFQAECVMRVMEAHSVKKLSL 120 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~-----~-w~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~~~l~~l~~~~v~l 120 (315)
+.|.||++||.|---.. . ...+...+. ...+++.|+.-...-... .-.....+....-..+++..|.++++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~L 199 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIIL 199 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEE
Confidence 46888999997643211 1 111222233 458888898532200000 011111122333345555678899999
Q ss_pred EEEchhHHHHHHHHHhhhh-----hhceeEEeeCCCcc
Q 021229 121 VGLSYGGFVGYSMAAQFKE-----KIEKVVICCSGVCL 153 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~-----~v~~lil~~~~~~~ 153 (315)
+|-|.||-+++.+...... ..+++||+++....
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 9999999999988764321 25788998876544
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00084 Score=52.13 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=29.1
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhh----hhceeEEeeCC
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKE----KIEKVVICCSG 150 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~~ 150 (315)
....+++++||||||.+|..++...+. .+..++..+++
T Consensus 25 ~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 25 YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 357899999999999999999998865 34455544443
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=57.31 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHH-HcCC----CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 100 SFQAECVMRVME-AHSV----KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 100 ~~~a~~~~~~l~-~l~~----~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
.+..+++-..++ +... ++..++||||||.=|+.+|+++|+++..+.-.++.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 344555554444 4432 26889999999999999999999999988765543
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00062 Score=57.45 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=49.8
Q ss_pred CCCcEEEEccCCCChh--hhHHhh---HhhccccceEEeecCCCCCCCCCCC---C-CCCchhHHHHHHHHHHHcC--CC
Q 021229 48 SKPDLVLIHGLGANAL--WQWTNI---IPHMIHYFNVYVPDLLFFGDSFTTR---P-ERSESFQAECVMRVMEAHS--VK 116 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~--~~w~~~---~~~l~~~~~vi~~D~~G~G~S~~~~---~-~~~~~~~a~~~~~~l~~l~--~~ 116 (315)
+..|||+.||+|.+.. ..+..+ ++..-++--|+++++ |.+.... . ......+.+.+.+.+.... .+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i---g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~ 80 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI---GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELAN 80 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S---SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE---CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhc
Confidence 3458999999986531 124443 333334466777777 3221000 0 0112223444555554421 14
Q ss_pred ceEEEEEchhHHHHHHHHHhhhh-hhceeEEeeC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKE-KIEKVVICCS 149 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~-~v~~lil~~~ 149 (315)
-+++||+|-||.+.=.++.++|+ .|+.+|-+++
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 59999999999999999999876 6888887764
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00079 Score=51.28 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
.+.+.++++.....++++.|||+||.+|..++....+
T Consensus 51 ~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 51 LDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 4556666666666789999999999999999987644
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0049 Score=56.59 Aligned_cols=83 Identities=11% Similarity=0.068 Sum_probs=51.1
Q ss_pred hHhhcccc--ceEEeecCCCCCCCCCCCC-------CCCchhHHHHHHHHHHHcC-------CCceEEEEEchhHHHHHH
Q 021229 69 IIPHMIHY--FNVYVPDLLFFGDSFTTRP-------ERSESFQAECVMRVMEAHS-------VKKLSLVGLSYGGFVGYS 132 (315)
Q Consensus 69 ~~~~l~~~--~~vi~~D~~G~G~S~~~~~-------~~~~~~~a~~~~~~l~~l~-------~~~v~lvGhSmGG~ia~~ 132 (315)
++-.+++. --|+++..|-+|+|..... ..+......|++.+++++. ..|++++|-|.||++|.-
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw 129 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAW 129 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHH
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHH
Confidence 44455554 5789999999999963211 1122223455666665432 247999999999999999
Q ss_pred HHHhhhhhhceeEEeeCCC
Q 021229 133 MAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 133 ~a~~~p~~v~~lil~~~~~ 151 (315)
+-.++|+.|.+.+.-++++
T Consensus 130 ~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 130 FRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHHH-TTT-SEEEEET--C
T ss_pred HHhhCCCeeEEEEecccee
Confidence 9999999999887655443
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0022 Score=53.20 Aligned_cols=97 Identities=15% Similarity=0.259 Sum_probs=60.3
Q ss_pred CcEEEEccCCCChh-hhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-C-CceEEEEEc
Q 021229 50 PDLVLIHGLGANAL-WQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-V-KKLSLVGLS 124 (315)
Q Consensus 50 ~~vvllHG~~~~~~-~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~-~~v~lvGhS 124 (315)
.|+|++||+|.+.. .....+.+.+.+ +..|++.|. |+............+++.+.+.+.... . .-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei---g~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI---GDGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe---cCCcchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 58999999987543 224455555543 478999997 433211112223334444444443211 1 348999999
Q ss_pred hhHHHHHHHHHhhhh-hhceeEEeeC
Q 021229 125 YGGFVGYSMAAQFKE-KIEKVVICCS 149 (315)
Q Consensus 125 mGG~ia~~~a~~~p~-~v~~lil~~~ 149 (315)
-||.++=.++...|+ .|...|-+++
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccC
Confidence 999999999988765 5777776654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0053 Score=55.98 Aligned_cols=61 Identities=23% Similarity=0.383 Sum_probs=48.4
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC-----------------------CC-cEEEEEcCCCCccccCChHHHHHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG-----------------------DN-AQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~-----------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
.+++|+..|+.|.+||.-..+.+.+.+. .+ .+++.+-+|||+++ ++|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999876666654331 12 46778889999997 58999999999
Q ss_pred HHHhcC
Q 021229 296 SFLLDS 301 (315)
Q Consensus 296 ~fl~~~ 301 (315)
+|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999753
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0022 Score=60.41 Aligned_cols=118 Identities=14% Similarity=0.044 Sum_probs=61.4
Q ss_pred CceEEEEEecCCCC--CCCcEEEEccCCCC---hh-hhHHhhHhhccccceEEeecCC----CCCCCCCCC---CCCCch
Q 021229 34 GSVMHCWVPKTRND--SKPDLVLIHGLGAN---AL-WQWTNIIPHMIHYFNVYVPDLL----FFGDSFTTR---PERSES 100 (315)
Q Consensus 34 g~~~~~~~~~~~~~--~~~~vvllHG~~~~---~~-~~w~~~~~~l~~~~~vi~~D~~----G~G~S~~~~---~~~~~~ 100 (315)
=..++.|.+..... +.|.+|+|||.+.. +. ..+....-...+..=||.+.+| ||-.+.... .+.-..
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~ 187 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLL 187 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhh
Confidence 35788888754332 35888999995432 10 1122211122345778888988 332222111 122222
Q ss_pred hH---HHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 101 FQ---AECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 101 ~~---a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
++ -++|.+-+.++|. ++|.|+|||-||..+..+...- ...+.++|+.++..
T Consensus 188 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 22 2345555556663 6799999999998887776652 23689999887643
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.002 Score=41.53 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=25.3
Q ss_pred eeeeeeecCCCceEEEEEecCCC------CCCCcEEEEccCCCChhhhH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRN------DSKPDLVLIHGLGANALWQW 66 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~------~~~~~vvllHG~~~~~~~~w 66 (315)
..+..+++.||..+..+..+.+. ..+|+|+|.||+.+++. .|
T Consensus 12 ~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 12 CEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp -EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred cEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 35678999999888888765433 45789999999988875 46
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0019 Score=59.79 Aligned_cols=84 Identities=15% Similarity=0.208 Sum_probs=48.2
Q ss_pred hhHHhhHhhcccc-ce-----EEeecCCCCCCCCCCCCCCCchh---HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHH
Q 021229 64 WQWTNIIPHMIHY-FN-----VYVPDLLFFGDSFTTRPERSESF---QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMA 134 (315)
Q Consensus 64 ~~w~~~~~~l~~~-~~-----vi~~D~~G~G~S~~~~~~~~~~~---~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a 134 (315)
+.|..+++.|.+. |. ...+|+|- |.. ..+....+ +...|....+..+.+||+|+||||||.+++.+.
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~~-~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRL---SFQ-NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeeccccccc---Ccc-chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 4688999988753 53 33445541 100 01111111 122222232333468999999999999999987
Q ss_pred Hhh---------------hhhhceeEEeeCCC
Q 021229 135 AQF---------------KEKIEKVVICCSGV 151 (315)
Q Consensus 135 ~~~---------------p~~v~~lil~~~~~ 151 (315)
... ...|++.|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 632 12478888876543
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0021 Score=57.64 Aligned_cols=74 Identities=16% Similarity=0.309 Sum_probs=46.7
Q ss_pred hhHHhhHhhcccc-ce----E--EeecCCC-CCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 64 WQWTNIIPHMIHY-FN----V--YVPDLLF-FGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 64 ~~w~~~~~~l~~~-~~----v--i~~D~~G-~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
+.|..+++.+..- |+ + ..+|+|- +-.+ ...+.....+...++...+..|.+||+||+|||||.+.+.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~--e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~ 201 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNS--EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLK 201 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCCh--hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHh
Confidence 4788988887642 43 3 4567762 1111 1112222233444444445556799999999999999999998
Q ss_pred hhhh
Q 021229 136 QFKE 139 (315)
Q Consensus 136 ~~p~ 139 (315)
.+++
T Consensus 202 w~~~ 205 (473)
T KOG2369|consen 202 WVEA 205 (473)
T ss_pred cccc
Confidence 8876
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0041 Score=45.21 Aligned_cols=44 Identities=23% Similarity=0.421 Sum_probs=24.6
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhh
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNI 69 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~ 69 (315)
+.-.++.+ +|..+|+....+.+.+..||||+|||+++-. .|.++
T Consensus 68 ~phf~t~I-~g~~iHFih~rs~~~~aiPLll~HGWPgSf~-Ef~~v 111 (112)
T PF06441_consen 68 FPHFKTEI-DGLDIHFIHVRSKRPNAIPLLLLHGWPGSFL-EFLKV 111 (112)
T ss_dssp S-EEEEEE-TTEEEEEEEE--S-TT-EEEEEE--SS--GG-GGHHH
T ss_pred CCCeeEEE-eeEEEEEEEeeCCCCCCeEEEEECCCCccHH-hHHhh
Confidence 33345555 5889999876655566779999999998763 45544
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0021 Score=51.39 Aligned_cols=112 Identities=18% Similarity=0.221 Sum_probs=61.9
Q ss_pred ceEEEEEecCC--CCCCCcEEEEccCCCChh-hhHHhhHhhcc--ccceEEeecCCCCC-----CCCCC-----------
Q 021229 35 SVMHCWVPKTR--NDSKPDLVLIHGLGANAL-WQWTNIIPHMI--HYFNVYVPDLLFFG-----DSFTT----------- 93 (315)
Q Consensus 35 ~~~~~~~~~~~--~~~~~~vvllHG~~~~~~-~~w~~~~~~l~--~~~~vi~~D~~G~G-----~S~~~----------- 93 (315)
.+..++.++.. +...|+|.+|.|+.+... +.=..-.+..+ .+.-|+.||-.-.| ++++-
T Consensus 28 Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvn 107 (283)
T KOG3101|consen 28 MTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVN 107 (283)
T ss_pred eEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEe
Confidence 34555654322 233578889999987653 11111122222 23678888854322 22110
Q ss_pred ---CCC----CCchhHHHHHHHHHHH----cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEE
Q 021229 94 ---RPE----RSESFQAECVMRVMEA----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146 (315)
Q Consensus 94 ---~~~----~~~~~~a~~~~~~l~~----l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil 146 (315)
.+. +..++..+++-+++.. ++..++.+.||||||.=|+..+.+.|.+.+++-.
T Consensus 108 At~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSA 171 (283)
T KOG3101|consen 108 ATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSA 171 (283)
T ss_pred cccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceec
Confidence 000 0112223334444431 2235789999999999999999999998877643
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=52.01 Aligned_cols=60 Identities=22% Similarity=0.360 Sum_probs=48.2
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC-----------------------CC-cEEEEEcCCCCccccCChHHHHHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG-----------------------DN-AQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~-----------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
.+++|+..|+.|-+|+.-..+.+.+.+. .+ .+++.+.+|||+++ ++|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999999876666655431 12 56777889999996 59999999999
Q ss_pred HHHhc
Q 021229 296 SFLLD 300 (315)
Q Consensus 296 ~fl~~ 300 (315)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0058 Score=50.53 Aligned_cols=46 Identities=22% Similarity=0.255 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh----hhhceeEEeeCC
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK----EKIEKVVICCSG 150 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p----~~v~~lil~~~~ 150 (315)
+.+..+++..+ .++.+.|||.||.+|+..+...+ ++|.++...+++
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 34445555544 35999999999999999998854 356777666543
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0057 Score=50.93 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=24.0
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+.++.....++++.||||||.+|..++....
T Consensus 120 ~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 120 SALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3333334578999999999999999988754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0052 Score=51.31 Aligned_cols=40 Identities=10% Similarity=0.236 Sum_probs=34.4
Q ss_pred CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCcc
Q 021229 114 SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCL 153 (315)
Q Consensus 114 ~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~ 153 (315)
+.++-.++|||+||.+++.....+|+.+...+++++..-+
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 3456889999999999999999999999999988766533
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.019 Score=46.02 Aligned_cols=42 Identities=17% Similarity=0.344 Sum_probs=33.3
Q ss_pred HHHcCCCceEEEEEchhHHHHHHHHHhhhh--hhceeEEeeCCC
Q 021229 110 MEAHSVKKLSLVGLSYGGFVGYSMAAQFKE--KIEKVVICCSGV 151 (315)
Q Consensus 110 l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~--~v~~lil~~~~~ 151 (315)
+.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 184 v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 184 VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 333456889999999999999999999986 566777766653
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.1 Score=48.41 Aligned_cols=125 Identities=15% Similarity=0.169 Sum_probs=71.9
Q ss_pred chhhcceee--eeeecCCCceEEEEEecCC--CCCCCcEEEEccCCC---ChhhhHHh-hHhhccccceEEeecCCCCCC
Q 021229 18 CFKRLGFRS--SVTDLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGA---NALWQWTN-IIPHMIHYFNVYVPDLLFFGD 89 (315)
Q Consensus 18 ~~~~~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~---~~~~~w~~-~~~~l~~~~~vi~~D~~G~G~ 89 (315)
+|-+.++.. ...+-.||++++|.....+ ..+.|++| ||+|+ +-.=.+.. +...|.++...+...+||=|+
T Consensus 386 ~FDa~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll--~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGE 463 (648)
T COG1505 386 QFDADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLL--YAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGE 463 (648)
T ss_pred CcCccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEE--EeccccccccCCccchhhHHHHhcCCeEEEEecccCCc
Confidence 344456543 3455579999998765311 12355554 44432 11102333 344456667778889998654
Q ss_pred CCC------CCCCCCchhHHHHHHHHHHH---cCC---CceEEEEEchhHHHHHHHHHhhhhhhceeEE
Q 021229 90 SFT------TRPERSESFQAECVMRVMEA---HSV---KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146 (315)
Q Consensus 90 S~~------~~~~~~~~~~a~~~~~~l~~---l~~---~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil 146 (315)
=.. ...+... --++..++.+. .|+ +++.+.|-|-||.+.-....++|+.+.++|.
T Consensus 464 fGp~WH~Aa~k~nrq~--vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 464 FGPEWHQAGMKENKQN--VFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred cCHHHHHHHhhhcchh--hhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 321 0111111 12233333333 354 5789999999999998889999998887764
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.038 Score=50.34 Aligned_cols=107 Identities=13% Similarity=0.216 Sum_probs=67.2
Q ss_pred eeeecC--CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHhhc-------------------cccceEEeec
Q 021229 27 SVTDLQ--DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIPHM-------------------IHYFNVYVPD 83 (315)
Q Consensus 27 ~~~~~~--~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~~l-------------------~~~~~vi~~D 83 (315)
-+++++ .+..++||...+. +..+|.||.|-|.++.+.. ...+.++ .+...++.+|
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl--~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd 124 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL--GGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLD 124 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch--hhhhhhcCCeEEcCCCCcceeCCccccccccEEEEe
Confidence 367776 5788999986542 3346788999998766532 1222111 1225789999
Q ss_pred CC-CCCCCCCCCC-C--CCchhHHHHHHHHHHH----c---CCCceEEEEEchhHHHHHHHHH
Q 021229 84 LL-FFGDSFTTRP-E--RSESFQAECVMRVMEA----H---SVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 84 ~~-G~G~S~~~~~-~--~~~~~~a~~~~~~l~~----l---~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
.| |-|.|.+..+ + ..+...|++..++|.. . .-.++.|.|-|.+|...-.+|.
T Consensus 125 ~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 125 QPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 99 8888864332 1 2334446665555543 2 3468999999999965555544
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.037 Score=49.24 Aligned_cols=63 Identities=25% Similarity=0.222 Sum_probs=44.5
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEE-----------cCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVI-----------KKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i-----------~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
-.+..|+..|..+|.+.-+.+.+.+ +=++++++| .+..|..-+..-..|.+.+-..|++...+
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~~ 371 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQGR 371 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhcc
Confidence 3455899999999999888887654 235777777 45678776666667777766666654443
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.037 Score=48.98 Aligned_cols=99 Identities=12% Similarity=0.278 Sum_probs=62.1
Q ss_pred CcEEEEccCCCChhh-------hHHhhHhhccccceEEeecCCCCCCCCCC-CC--------CC-CchhHHHHHHHHHHH
Q 021229 50 PDLVLIHGLGANALW-------QWTNIIPHMIHYFNVYVPDLLFFGDSFTT-RP--------ER-SESFQAECVMRVMEA 112 (315)
Q Consensus 50 ~~vvllHG~~~~~~~-------~w~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~--------~~-~~~~~a~~~~~~l~~ 112 (315)
.||+|--|.-++-.+ +| .+.+.+ +.-+|....|-+|+|..= +. .+ +......|.++++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~-D~Ap~~--~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMW-DLAPEL--KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHH-hhhHhh--CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 479999987554322 22 233333 246788899999998521 11 01 111112233444444
Q ss_pred c------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 113 H------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 113 l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+ ...+|+.+|-|.|||+|.-+=.++|..|.+....++++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 4 23589999999999999999999999888876554443
|
|
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.019 Score=50.63 Aligned_cols=84 Identities=26% Similarity=0.245 Sum_probs=48.0
Q ss_pred CCcEEEEccCCC-ChhhhHHhhHhhccccceEEeecCCCC-CCCCCC-CC-CCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 49 KPDLVLIHGLGA-NALWQWTNIIPHMIHYFNVYVPDLLFF-GDSFTT-RP-ERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 49 ~~~vvllHG~~~-~~~~~w~~~~~~l~~~~~vi~~D~~G~-G~S~~~-~~-~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
+--+||.||+-+ +.. .|...+....+.+.-..+.-+|+ |....+ .. ...-...++++.+.+....++++.+||||
T Consensus 80 ~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 346899999755 343 57766666655533323333332 222111 11 11112245566666655668999999999
Q ss_pred hhHHHHHHH
Q 021229 125 YGGFVGYSM 133 (315)
Q Consensus 125 mGG~ia~~~ 133 (315)
+||.++-..
T Consensus 159 LGGLvar~A 167 (405)
T KOG4372|consen 159 LGGLVARYA 167 (405)
T ss_pred cCCeeeeEE
Confidence 999887444
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.021 Score=51.69 Aligned_cols=32 Identities=22% Similarity=0.248 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
+.+.+++......++++.|||+||++|..+|.
T Consensus 266 ~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 266 QMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34555665556678999999999999998865
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.027 Score=49.43 Aligned_cols=42 Identities=29% Similarity=0.390 Sum_probs=32.9
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhhh-----hceeEEeeCCCccC
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKEK-----IEKVVICCSGVCLE 154 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~~-----v~~lil~~~~~~~~ 154 (315)
+|..+|.|||||+|+.+.........++ |+.++|+.++...+
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3667899999999999998887766554 78888887665443
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.019 Score=51.42 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCc--eEEEEEchhHHHHHHHHHhh
Q 021229 106 VMRVMEAHSVKK--LSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 106 ~~~~l~~l~~~~--v~lvGhSmGG~ia~~~a~~~ 137 (315)
+.++++....++ +++.||||||++|+..|...
T Consensus 216 V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 216 IKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 444444444444 99999999999999998754
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.02 Score=51.91 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHh
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ 136 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~ 136 (315)
.+.+.++++.....++++.|||+||++|..+|..
T Consensus 271 ~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 271 LRHLKEIFDQNPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHH
Confidence 4566777777777789999999999999988853
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.59 E-value=1.3 Score=37.79 Aligned_cols=103 Identities=6% Similarity=0.054 Sum_probs=66.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGF 128 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ 128 (315)
.|.|+++-.+.++...-.+.-++.|.....|+.-|+-.--.-.-.......+++.+.+.++++.+|.+ +|+++.+--+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~v 181 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTV 181 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCc
Confidence 45677776666655444566677777788899988852111111122344556788899999999864 88888876653
Q ss_pred -----HHHHHHHhhhhhhceeEEeeCCCc
Q 021229 129 -----VGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 129 -----ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+++.-+...|....+++++.+++.
T Consensus 182 PvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 182 PVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred hHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 333333345666788888877654
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.022 Score=51.00 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhh
Q 021229 104 ECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 104 ~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.++.++++....+ ++++.||||||++|...|...
T Consensus 212 ~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 212 NEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 4455555554433 689999999999999988753
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.062 Score=42.85 Aligned_cols=46 Identities=20% Similarity=0.206 Sum_probs=34.0
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHh------hhhhhceeEEeeCCC
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ------FKEKIEKVVICCSGV 151 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~------~p~~v~~lil~~~~~ 151 (315)
+.+........+++|+|+|.|+.++..++.. ..++|.+++++..+.
T Consensus 71 i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 71 IEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 3344444456799999999999999999877 346788888886544
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.028 Score=49.60 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhhhh
Q 021229 104 ECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 104 ~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
+.+.++++....+ ++++.|||+||.+|...|.....
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 4455566655433 58999999999999999886543
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.19 Score=45.82 Aligned_cols=100 Identities=16% Similarity=0.038 Sum_probs=59.5
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhh--------------cc-----ccceEEeecCC-CCCCCCCCCCCCC--chhHHHH
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPH--------------MI-----HYFNVYVPDLL-FFGDSFTTRPERS--ESFQAEC 105 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~--------------l~-----~~~~vi~~D~~-G~G~S~~~~~~~~--~~~~a~~ 105 (315)
+.|.|+.+.|.++++.. |-.+.+. +. ..-.++-+|+| |-|.|.....+.. .....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchh
Confidence 57788999998877753 5443210 11 12478999966 8888874221111 1111222
Q ss_pred HH-------HHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhh---hceeEEee
Q 021229 106 VM-------RVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEK---IEKVVICC 148 (315)
Q Consensus 106 ~~-------~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~---v~~lil~~ 148 (315)
+. +.+.+.. ..+.+|+|-|+||.-+..+|...-++ .+++++++
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nls 233 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLS 233 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEee
Confidence 22 2333333 35899999999999888888765543 45555544
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.098 Score=45.64 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=48.2
Q ss_pred cccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 236 IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 236 l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
-.++..|-.++.|+.|.+++++.+......++...-+.++|+..|... +..+.+.|..|+..
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnr 386 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNR 386 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHH
Confidence 357889999999999999999999989999965567889999999765 34445555555543
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.031 Score=51.11 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=27.5
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHh
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ 136 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~ 136 (315)
...+.++++.....++++.|||+||++|..+|..
T Consensus 308 ~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 308 RSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 4456677777767799999999999999998754
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.057 Score=42.77 Aligned_cols=48 Identities=29% Similarity=0.302 Sum_probs=37.0
Q ss_pred HHHHHHHHHHcC-----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 103 AECVMRVMEAHS-----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 103 a~~~~~~l~~l~-----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
+..+.+|++.+. ..++.++|||+|+.++-..+...+..+..++++.++
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 566777777663 346899999999999988777756789999988643
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.13 Score=42.75 Aligned_cols=96 Identities=11% Similarity=0.151 Sum_probs=51.1
Q ss_pred EEEEcc--CCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC----CceEEEEEc
Q 021229 52 LVLIHG--LGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV----KKLSLVGLS 124 (315)
Q Consensus 52 vvllHG--~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~----~~v~lvGhS 124 (315)
|-||=| +|......++.+++.|.+ +|.|++.-+.- |.....-.......+...+.++.+..+. -++.-+|||
T Consensus 20 ihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHS 98 (250)
T PF07082_consen 20 IHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHS 98 (250)
T ss_pred EEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecc
Confidence 344444 244444567788888875 49999876631 1000000000000111122222222222 256789999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEee
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICC 148 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~ 148 (315)
||+.+-+.+...++..-++.++++
T Consensus 99 lGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 99 LGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cchHHHHHHhhhccCcccceEEEe
Confidence 999998888877765556667664
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.056 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhh
Q 021229 104 ECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 104 ~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
..|.++++.... .+|.+.|||+||++|...|...
T Consensus 201 ~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 201 GELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 345556665543 2689999999999999988753
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.061 Score=48.11 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=24.4
Q ss_pred HHHHHHHHHcC----CCceEEEEEchhHHHHHHHHHhh
Q 021229 104 ECVMRVMEAHS----VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 104 ~~~~~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
+.+.++++... ..++++.||||||++|...|...
T Consensus 193 ~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 193 QEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34455555442 24799999999999999888654
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.075 Score=48.69 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=24.8
Q ss_pred HHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhh
Q 021229 105 CVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 105 ~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
.+.++++.... .++++.|||+||.+|...|...-
T Consensus 317 eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 317 EVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 44555555432 36899999999999999887653
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.065 Score=49.93 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=22.7
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhh
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.++....-+++++|||+||.+|..++...
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 33444456899999999999999988764
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.08 E-value=5.6 Score=37.90 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=30.3
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~ 149 (315)
+.++++|-|.||+++-..+-..|+.++++|+-.+
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 5799999999999999999999999999986544
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.086 Score=48.50 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=24.4
Q ss_pred HHHHHHHHcC-----CCceEEEEEchhHHHHHHHHHhh
Q 021229 105 CVMRVMEAHS-----VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 105 ~~~~~l~~l~-----~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.+.++++... ..+|.+.|||+||++|...|...
T Consensus 296 eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 296 EVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 3445555443 24899999999999999998653
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.22 Score=43.76 Aligned_cols=60 Identities=23% Similarity=0.388 Sum_probs=47.6
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC-----------------------CC-cEEEEEcCCCCccccCChHHHHHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG-----------------------DN-AQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~-----------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
.+++|+..|+.|.+|+.-..+.+.+.+. .+ .+++.+-+|||+++ ++|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999998766666655432 12 56677779999997 59999999999
Q ss_pred HHHhc
Q 021229 296 SFLLD 300 (315)
Q Consensus 296 ~fl~~ 300 (315)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.16 Score=41.22 Aligned_cols=69 Identities=13% Similarity=-0.010 Sum_probs=42.1
Q ss_pred hHhhccccceEEeecCCCCCCCC-C-CC-CCC------CchhHHHHHHHHHHHcC-CCceEEEEEchhHHHHHHHHHhh
Q 021229 69 IIPHMIHYFNVYVPDLLFFGDSF-T-TR-PER------SESFQAECVMRVMEAHS-VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 69 ~~~~l~~~~~vi~~D~~G~G~S~-~-~~-~~~------~~~~~a~~~~~~l~~l~-~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
+...++...+|++|=+|-..... . .. ... ...+..+....+|++.+ ..+|+|+|||-|+++...+....
T Consensus 38 qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44455566789998887322111 1 01 110 11112334555666665 46899999999999999998865
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.11 Score=47.69 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.1
Q ss_pred CceEEEEEchhHHHHHHHHHhh
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.++.+.|||+||++|...|...
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 3799999999999999988654
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.11 Score=47.71 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=24.1
Q ss_pred HHHHHHHHHcC------CCceEEEEEchhHHHHHHHHHhh
Q 021229 104 ECVMRVMEAHS------VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 104 ~~~~~~l~~l~------~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
..|..+++... ..++.+.|||+||++|...|...
T Consensus 276 ~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 276 AEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 34455555442 23699999999999999888643
|
|
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.54 Score=42.89 Aligned_cols=103 Identities=19% Similarity=0.271 Sum_probs=67.1
Q ss_pred CCCCcEEEEccCCCCh-hh------hHHhhHhhccccceEEeecCCCCCCCCCCCCCC-------CchhHHHHHHHHHHH
Q 021229 47 DSKPDLVLIHGLGANA-LW------QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-------SESFQAECVMRVMEA 112 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~-~~------~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~-------~~~~~a~~~~~~l~~ 112 (315)
.++|..|+|-|=|... .| .|...+..+ +..|+....|-+|.|....... +......|+++++++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 4566677777744332 11 222222222 3689999999999885322211 112234567777776
Q ss_pred cCC-------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 113 HSV-------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 113 l~~-------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
++. .+.+..|-|.-|.++.-+=.++|+.+.+.|.-++++
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 632 278999999999999999999999998887655443
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.59 Score=44.32 Aligned_cols=117 Identities=17% Similarity=0.125 Sum_probs=60.1
Q ss_pred CceEEEEEecCCCCC-CCcEEEEccCCCC--hhhhHHhhHh-hccc--cceEEeecCC----CCCCCCC--CCCCCCchh
Q 021229 34 GSVMHCWVPKTRNDS-KPDLVLIHGLGAN--ALWQWTNIIP-HMIH--YFNVYVPDLL----FFGDSFT--TRPERSESF 101 (315)
Q Consensus 34 g~~~~~~~~~~~~~~-~~~vvllHG~~~~--~~~~w~~~~~-~l~~--~~~vi~~D~~----G~G~S~~--~~~~~~~~~ 101 (315)
-..++++.+...... .|.+|+|||.+.. +...+....+ .+.. +.=|+.+.+| |+..... ...+....+
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~D 175 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFD 175 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHH
Confidence 346777765322211 6889999996431 1011211111 1111 2345566666 3322211 112222222
Q ss_pred H---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCC
Q 021229 102 Q---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSG 150 (315)
Q Consensus 102 ~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~ 150 (315)
+ -+++.+-+...| .++|.|+|||.||..+..+...- ...+.++|.+++.
T Consensus 176 q~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 176 QLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 2 234555556665 46799999999999987776532 2346666665543
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.13 Score=47.37 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=24.3
Q ss_pred HHHHHHHHHcC----CCceEEEEEchhHHHHHHHHHhh
Q 021229 104 ECVMRVMEAHS----VKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 104 ~~~~~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
++|.++++... ..++.+.|||+||++|...|...
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 34555555442 23699999999999999888654
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.33 Score=45.55 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=29.2
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEe
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC 147 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~ 147 (315)
.++..+.|.|.||.++..+.-++|+.+..+|+-
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhhc
Confidence 367889999999999999999999999888753
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.24 Score=46.07 Aligned_cols=31 Identities=16% Similarity=0.398 Sum_probs=20.8
Q ss_pred HHHHHHHcC---CCceEEEEEchhHHHHHHHHHh
Q 021229 106 VMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQ 136 (315)
Q Consensus 106 ~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~ 136 (315)
+.+.+.+.+ ..+++.+||||||.++=.+...
T Consensus 513 lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 513 LLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 444444433 3579999999999887666543
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.79 E-value=0.091 Score=44.76 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=30.5
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+.-+|+|-|+||.+++..+..+|+.+-.++..++..
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 456799999999999999999999998887665443
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.18 Score=44.48 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhh
Q 021229 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.+.+.+..+++....-++.+-|||+||.+|...|..-
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHH
Confidence 3456677788887777899999999999998888753
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.45 Score=41.77 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=39.6
Q ss_pred ceEEeecCC-CCCCCCCCCC-CC-CchhHHHHHHHHHHHc-------CCCceEEEEEchhHHHHHHHHHh
Q 021229 77 FNVYVPDLL-FFGDSFTTRP-ER-SESFQAECVMRVMEAH-------SVKKLSLVGLSYGGFVGYSMAAQ 136 (315)
Q Consensus 77 ~~vi~~D~~-G~G~S~~~~~-~~-~~~~~a~~~~~~l~~l-------~~~~v~lvGhSmGG~ia~~~a~~ 136 (315)
.+++.+|.| |-|.|....+ .. +....++++..+|+.+ ...+++|.|-|.||.-+-.+|..
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 368899999 8888864432 22 2223345555555442 34689999999999876666664
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.73 Score=46.61 Aligned_cols=95 Identities=19% Similarity=0.297 Sum_probs=60.5
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC-CCCCCchhHHHHHHHHHHHcC-CCceEEEEEc
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT-RPERSESFQAECVMRVMEAHS-VKKLSLVGLS 124 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhS 124 (315)
.+.|++.|+|..-+... ....++..+. .|-||.-... .|..+....+..-.+-++.+. ..+..|+|.|
T Consensus 2121 se~~~~Ffv~pIEG~tt-~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTT-ALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchH-HHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 45789999997654442 3555544443 3445544322 344455444554445555554 5688999999
Q ss_pred hhHHHHHHHHHhhhh--hhceeEEeeCCC
Q 021229 125 YGGFVGYSMAAQFKE--KIEKVVICCSGV 151 (315)
Q Consensus 125 mGG~ia~~~a~~~p~--~v~~lil~~~~~ 151 (315)
+|+.++.++|....+ ....+|+++..+
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999887644 356688887554
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.57 Score=42.92 Aligned_cols=123 Identities=14% Similarity=0.195 Sum_probs=72.5
Q ss_pred eeeecCC--CceEEEEEecCC--CCCCCcEEEEccCCCChhh--hHHhhHh-------------hc-------cccceEE
Q 021229 27 SVTDLQD--GSVMHCWVPKTR--NDSKPDLVLIHGLGANALW--QWTNIIP-------------HM-------IHYFNVY 80 (315)
Q Consensus 27 ~~~~~~~--g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~--~w~~~~~-------------~l-------~~~~~vi 80 (315)
-++++.+ +..++||...+. ....|.|+.+-|.++++.. .|..+-| .+ .+...++
T Consensus 40 Gy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 119 (433)
T PLN03016 40 GYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANII 119 (433)
T ss_pred EEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEE
Confidence 3566643 567899885432 3356888999998665542 1222111 12 1237899
Q ss_pred eecCC-CCCCCCCCCCC-CC-chhHHHHHHHHHHH----c---CCCceEEEEEchhHHHHHHHHHhhh----------hh
Q 021229 81 VPDLL-FFGDSFTTRPE-RS-ESFQAECVMRVMEA----H---SVKKLSLVGLSYGGFVGYSMAAQFK----------EK 140 (315)
Q Consensus 81 ~~D~~-G~G~S~~~~~~-~~-~~~~a~~~~~~l~~----l---~~~~v~lvGhSmGG~ia~~~a~~~p----------~~ 140 (315)
.+|.| |.|.|....+. .. ....++++.+++.. . ...+++|.|.|.||..+-.+|..-- -.
T Consensus 120 fiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~in 199 (433)
T PLN03016 120 FLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPIN 199 (433)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccc
Confidence 99966 89988644322 12 11234455555543 2 3467999999999986666655421 14
Q ss_pred hceeEEeeC
Q 021229 141 IEKVVICCS 149 (315)
Q Consensus 141 v~~lil~~~ 149 (315)
++++++-++
T Consensus 200 LkGi~iGNg 208 (433)
T PLN03016 200 LQGYMLGNP 208 (433)
T ss_pred ceeeEecCC
Confidence 567766554
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.65 Score=42.62 Aligned_cols=122 Identities=14% Similarity=0.202 Sum_probs=72.5
Q ss_pred eeecCC--CceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhH---h-------------hc-------cccceEE
Q 021229 28 VTDLQD--GSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNII---P-------------HM-------IHYFNVY 80 (315)
Q Consensus 28 ~~~~~~--g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~---~-------------~l-------~~~~~vi 80 (315)
++++.+ +..++||...+. ....|.|+.+-|.++++.. +..+. | .+ .+..+++
T Consensus 43 y~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 566643 567888875433 2346788999998666542 32111 1 11 1236899
Q ss_pred eecCC-CCCCCCCCCC-C-CCchhHHHHHHHHHHHc-------CCCceEEEEEchhHHHHHHHHHhhh----------hh
Q 021229 81 VPDLL-FFGDSFTTRP-E-RSESFQAECVMRVMEAH-------SVKKLSLVGLSYGGFVGYSMAAQFK----------EK 140 (315)
Q Consensus 81 ~~D~~-G~G~S~~~~~-~-~~~~~~a~~~~~~l~~l-------~~~~v~lvGhSmGG~ia~~~a~~~p----------~~ 140 (315)
.+|.| |.|.|....+ . .+....++++.++++.. ...+++|.|.|.||.-+-.+|..-- -.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 99966 8888864322 1 22223455666655542 2357999999999986666665421 13
Q ss_pred hceeEEeeCC
Q 021229 141 IEKVVICCSG 150 (315)
Q Consensus 141 v~~lil~~~~ 150 (315)
++++++.++.
T Consensus 202 l~Gi~igng~ 211 (437)
T PLN02209 202 LQGYVLGNPI 211 (437)
T ss_pred eeeEEecCcc
Confidence 5677665543
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=91.21 E-value=1.7 Score=37.53 Aligned_cols=114 Identities=16% Similarity=0.203 Sum_probs=69.7
Q ss_pred eeecCCCceEEEEEecCC--C-CCCCcEEEEccCCCChhh---hHHhhHhh---cc-------ccceEEeecCC-CCCCC
Q 021229 28 VTDLQDGSVMHCWVPKTR--N-DSKPDLVLIHGLGANALW---QWTNIIPH---MI-------HYFNVYVPDLL-FFGDS 90 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~--~-~~~~~vvllHG~~~~~~~---~w~~~~~~---l~-------~~~~vi~~D~~-G~G~S 90 (315)
++++..+.++.+|..... . ...|-.+.+.|.++.+.. .|+.+-|. +. +...++.+|.| |-|.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS 86 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee
Confidence 466667778888864321 2 234455777776544332 23332221 11 22568888988 78877
Q ss_pred CCC-CCCCC--chhHHHHHHHHHHHc-------CCCceEEEEEchhHHHHHHHHHhhhhhh
Q 021229 91 FTT-RPERS--ESFQAECVMRVMEAH-------SVKKLSLVGLSYGGFVGYSMAAQFKEKI 141 (315)
Q Consensus 91 ~~~-~~~~~--~~~~a~~~~~~l~~l-------~~~~v~lvGhSmGG~ia~~~a~~~p~~v 141 (315)
.-. +..++ ....+.++.++++.+ ...+++++-.|.||-+|..++...-+.|
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aI 147 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAI 147 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHH
Confidence 522 22222 334577888888754 3458999999999999999987654444
|
|
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=90.31 E-value=15 Score=33.94 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=64.2
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA 112 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~ 112 (315)
.+..+.|+..+ |+=++|-.|.+-|+-..-.+.=..++..|.. =-.+.=|.|--|.+...-....+....+.+.+-|+.
T Consensus 274 ~reEi~yYFnP-GD~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~ 351 (511)
T TIGR03712 274 KRQEFIYYFNP-GDFKPPLNVYFSGYRPAEGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDY 351 (511)
T ss_pred CCCeeEEecCC-cCCCCCeEEeeccCcccCcchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHH
Confidence 35555666543 4444555589999744322222234555532 123344888777665432222344456667788888
Q ss_pred cCC--CceEEEEEchhHHHHHHHHHhh
Q 021229 113 HSV--KKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 113 l~~--~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
||. ++.+|-|-|||..=|+.|+++.
T Consensus 352 LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 352 LGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred hCCCHHHeeeccccccchhhhhhcccC
Confidence 886 4699999999999999999986
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.05 E-value=13 Score=32.93 Aligned_cols=65 Identities=20% Similarity=0.334 Sum_probs=50.1
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhcCCCC
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~ 304 (315)
..+.+.+.+..|.++|.+..+++..... .+.+.+-+.++-|..++ ..|..+.+...+|+++....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 4678888899999999998888854331 24555667788897766 67999999999999866543
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.57 E-value=0.9 Score=41.63 Aligned_cols=60 Identities=25% Similarity=0.415 Sum_probs=47.9
Q ss_pred CCeEEEEeCCCCCCchHHHHHHHhhcC------------------------CCcEEEEEcCCCCccccCChHHHHHHHHH
Q 021229 241 QPTLILWGEHDQIFPLELGRRLKSHLG------------------------DNAQLIVIKKAGHAFNYEKPKEFYKHLKS 296 (315)
Q Consensus 241 ~P~lvi~G~~D~~~~~~~~~~l~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 296 (315)
.+++|..|+.|.+||.-..+.+.+.+. .+..+..+.||||+++.++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 799999999999999876666533221 11345778899999999999999999999
Q ss_pred HHhc
Q 021229 297 FLLD 300 (315)
Q Consensus 297 fl~~ 300 (315)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9975
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.88 E-value=2 Score=33.16 Aligned_cols=74 Identities=15% Similarity=0.168 Sum_probs=45.1
Q ss_pred cEEEEccCCCChhhhHHhhHhhccccce-EEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHH
Q 021229 51 DLVLIHGLGANALWQWTNIIPHMIHYFN-VYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFV 129 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~i 129 (315)
-||.+-|||...+. ..+++ +.++|. ++++|+..... +...+ ....+-||.+|||-.+
T Consensus 13 LIvyFaGwgtpps~-v~HLi--lpeN~dl~lcYDY~dl~l------dfDfs-------------Ay~hirlvAwSMGVwv 70 (214)
T COG2830 13 LIVYFAGWGTPPSA-VNHLI--LPENHDLLLCYDYQDLNL------DFDFS-------------AYRHIRLVAWSMGVWV 70 (214)
T ss_pred EEEEEecCCCCHHH-Hhhcc--CCCCCcEEEEeehhhcCc------ccchh-------------hhhhhhhhhhhHHHHH
Confidence 67888899887753 43332 234555 56889853211 11111 1234568999999999
Q ss_pred HHHHHHhhhhhhceeEEee
Q 021229 130 GYSMAAQFKEKIEKVVICC 148 (315)
Q Consensus 130 a~~~a~~~p~~v~~lil~~ 148 (315)
|-.+..-. ++++.+.++
T Consensus 71 AeR~lqg~--~lksatAiN 87 (214)
T COG2830 71 AERVLQGI--RLKSATAIN 87 (214)
T ss_pred HHHHHhhc--cccceeeec
Confidence 98887655 456666664
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=88.83 E-value=0.57 Score=39.58 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+..+.+.....++.|-|||+||.+|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334444445568999999999999999988773
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.83 E-value=0.57 Score=39.58 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+..+.+.....++.|-|||+||.+|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 334444445568999999999999999988773
|
|
| >PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function | Back alignment and domain information |
|---|
Probab=87.83 E-value=3.3 Score=29.44 Aligned_cols=70 Identities=20% Similarity=0.205 Sum_probs=46.2
Q ss_pred ceEEeecCCCCCCCCCCCC-CCCchhHHHHHHHHHHHcCCCceEEEEEchhH--HHHHHHHHhhhhhhceeEE
Q 021229 77 FNVYVPDLLFFGDSFTTRP-ERSESFQAECVMRVMEAHSVKKLSLVGLSYGG--FVGYSMAAQFKEKIEKVVI 146 (315)
Q Consensus 77 ~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG--~ia~~~a~~~p~~v~~lil 146 (315)
+..-.+.++.+|.+..... ......-...+.++++.+...+++|||=|=-. -+-..+|.++|++|.++.+
T Consensus 25 ~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 25 FPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred CCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 5544556665555532211 11112335678889999988999999988655 5566778899999988754
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=87.81 E-value=0.84 Score=36.47 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=46.0
Q ss_pred ccCC-CCeEEEEeCCCCCCchH---HHHHHHhhcCC-CcEEEEEcCCCCccccCCh---HHHHHHHHHHHhc
Q 021229 237 DKIT-QPTLILWGEHDQIFPLE---LGRRLKSHLGD-NAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLD 300 (315)
Q Consensus 237 ~~i~-~P~lvi~G~~D~~~~~~---~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 300 (315)
..|+ ++.|-|-|+.|.++.+. .+..|...+++ ...-++.++|||+-.+.=+ +++.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 4454 56777999999999765 45666666642 2456788899998877544 6777888888864
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=87.66 E-value=1.6 Score=38.94 Aligned_cols=82 Identities=21% Similarity=0.116 Sum_probs=48.5
Q ss_pred EEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH----cCCCceEEEEEchh
Q 021229 52 LVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA----HSVKKLSLVGLSYG 126 (315)
Q Consensus 52 vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~----l~~~~v~lvGhSmG 126 (315)
-||+.|=|+-... =..+...|.+ ++.|+-+|-.-|=-| ..+....+.++.++++. .+.+++.|+|.|+|
T Consensus 263 av~~SGDGGWr~l-Dk~v~~~l~~~gvpVvGvdsLRYfW~-----~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfG 336 (456)
T COG3946 263 AVFYSGDGGWRDL-DKEVAEALQKQGVPVVGVDSLRYFWS-----ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFG 336 (456)
T ss_pred EEEEecCCchhhh-hHHHHHHHHHCCCceeeeehhhhhhc-----cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeeccc
Confidence 3666664432211 1234455554 499999986533323 22333456666666654 46789999999999
Q ss_pred HHHHHHHHHhhhh
Q 021229 127 GFVGYSMAAQFKE 139 (315)
Q Consensus 127 G~ia~~~a~~~p~ 139 (315)
+=|.-..-.+.|.
T Consensus 337 ADvlP~~~n~L~~ 349 (456)
T COG3946 337 ADVLPFAYNRLPP 349 (456)
T ss_pred chhhHHHHHhCCH
Confidence 9765444444443
|
|
| >KOG2385 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=85.31 E-value=2.1 Score=39.40 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=33.6
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhhh-----hhhceeEEeeCCCccCch
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFK-----EKIEKVVICCSGVCLEEQ 156 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~p-----~~v~~lil~~~~~~~~~~ 156 (315)
..+|..+|.|||+|+|+-+.+......- ..|+.++|+.++......
T Consensus 442 r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 442 RSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred hccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 3457889999999999999886555332 247888888777655443
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=83.28 E-value=13 Score=34.56 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=67.0
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhhhHHh----hHhhccccceEEeecCCCCCCCCC--C-CCCCCch---------
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTN----IIPHMIHYFNVYVPDLLFFGDSFT--T-RPERSES--------- 100 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~----~~~~l~~~~~vi~~D~~G~G~S~~--~-~~~~~~~--------- 100 (315)
+.+|.+ .+-.+ -++.+=|.|.+....+.. +...+...|-++.=|- ||..+.. . .......
T Consensus 19 fev~LP--~~WNg-R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra 94 (474)
T PF07519_consen 19 FEVWLP--DNWNG-RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRA 94 (474)
T ss_pred EEEECC--hhhcc-CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhH
Confidence 345554 33333 466555444444334444 5566777899999886 6654432 1 1111111
Q ss_pred --hHHHHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 101 --FQAECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 101 --~~a~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
..+..-.++++.. ..+.-...|-|-||.-++..|.++|+...+++.-+++.
T Consensus 95 ~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 95 LHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 1122233444443 34667899999999999999999999999998765554
|
It also includes several bacterial homologues of unknown function. |
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=82.64 E-value=5.7 Score=32.92 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=26.0
Q ss_pred HHHHHHHHHH-c-CCCceEEEEEchhHHHHHHHHHhh
Q 021229 103 AECVMRVMEA-H-SVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 103 a~~~~~~l~~-l-~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
++.+.+.+++ . ..++++++|+|.|+.++...+.+.
T Consensus 33 ~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 33 VANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 4445555554 2 347899999999999999888765
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 315 | ||||
| 1iun_A | 282 | Meta-Cleavage Product Hydrolase From Pseudomonas Fl | 7e-13 | ||
| 2d0d_A | 282 | Crystal Structure Of A Meta-Cleavage Product Hydrol | 8e-13 | ||
| 1c4x_A | 285 | 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase | 1e-08 | ||
| 3om8_A | 266 | The Crystal Structure Of A Hydrolase From Pseudomon | 6e-07 | ||
| 2og1_A | 286 | Crystal Structure Of Bphd, A C-C Hydrolase From Bur | 1e-06 | ||
| 1j1i_A | 296 | Crystal Structure Of A His-Tagged Serine Hydrolase | 2e-06 | ||
| 2puh_A | 286 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 2e-06 | ||
| 2rht_A | 283 | Crystal Structure Of The S112a Mutant Of A C-C Hydr | 2e-06 | ||
| 1u2e_A | 289 | Crystal Structure Of The C-C Bond Hydrolase Mhpc Le | 3e-06 | ||
| 3v1k_A | 286 | Crystal Structure Of The H265q Mutant Of A C-C Hydr | 7e-06 | ||
| 2vf2_A | 311 | X-Ray Crystal Structure Of Hsad From Mycobacterium | 1e-05 | ||
| 3v1l_A | 286 | Crystal Structure Of The S112aH265Q MUTANT OF A C-C | 2e-05 | ||
| 2wud_A | 291 | Crystal Structure Of S114a Mutant Of Hsad From Myco | 2e-05 | ||
| 2pu7_A | 286 | Crystal Structure Of S112aH265A DOUBLE MUTANT OF A | 3e-05 | ||
| 2xua_A | 266 | Crystal Structure Of The Enol-Lactonase From Burkho | 3e-05 | ||
| 1ehy_A | 294 | X-Ray Structure Of The Epoxide Hydrolase From Agrob | 3e-05 | ||
| 4etw_A | 264 | Structure Of The Enzyme-Acp Substrate Gatekeeper Co | 4e-05 | ||
| 1m33_A | 258 | Crystal Structure Of Bioh At 1.7 A Length = 258 | 5e-05 | ||
| 3bdi_A | 207 | Crystal Structure Of Predicted Cib-Like Hydrolase ( | 8e-05 | ||
| 3t4u_A | 271 | L29i Mutation In An Aryl Esterase From Pseudomonas | 3e-04 | ||
| 3ia2_A | 271 | Pseudomonas Fluorescens Esterase Complexed To The R | 3e-04 | ||
| 3hi4_A | 271 | Switching Catalysis From Hydrolysis To Perhydrolysi | 3e-04 | ||
| 3hea_A | 271 | The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS E | 3e-04 | ||
| 1va4_A | 279 | Pseudomonas Fluorescens Aryl Esterase Length = 279 | 3e-04 | ||
| 3fob_A | 281 | Crystal Structure Of Bromoperoxidase From Bacillus | 5e-04 |
| >pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal Length = 282 | Back alignment and structure |
|
| >pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase (Cumd) A129v Mutant Length = 282 | Back alignment and structure |
|
| >pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd) From Rhodococcus Sp. Strain Rha1 Length = 285 | Back alignment and structure |
|
| >pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Aeruginosa Pa01 Length = 266 | Back alignment and structure |
|
| >pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase Involved In The Carbazole Degradation (Carc Enzyme) Length = 296 | Back alignment and structure |
|
| >pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With Its Substrate Hopda Length = 286 | Back alignment and structure |
|
| >pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In Complex With 3-Cl Hopda Length = 283 | Back alignment and structure |
|
| >pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc Length = 289 | Back alignment and structure |
|
| >pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400. Length = 286 | Back alignment and structure |
|
| >pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium Tuberculosis Length = 311 | Back alignment and structure |
|
| >pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C Hydrolase, Bphd From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From Mycobacterium Tuberculosis Length = 291 | Back alignment and structure |
|
| >pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C Hydrolase, Bphd, From Burkholderia Xenovorans Lb400 Length = 286 | Back alignment and structure |
|
| >pdb|2XUA|A Chain A, Crystal Structure Of The Enol-Lactonase From Burkholderia Xenovorans Lb400 Length = 266 | Back alignment and structure |
|
| >pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From Agrobacterium Radiobacter Ad1 Length = 294 | Back alignment and structure |
|
| >pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex Required For Biotin Synthesis Length = 264 | Back alignment and structure |
|
| >pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A Length = 258 | Back alignment and structure |
|
| >pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase (Np_393672.1) From Thermoplasma Acidophilum At 1.45 A Resolution Length = 207 | Back alignment and structure |
|
| >pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas Fluorescens Leads To Unique Peptide Flip And Increased Activity Length = 271 | Back alignment and structure |
|
| >pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The R-Enantiomer Of A Sulfonate Transition State Analog Length = 271 | Back alignment and structure |
|
| >pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P. Fluorescens Esterase Length = 271 | Back alignment and structure |
|
| >pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE Length = 271 | Back alignment and structure |
|
| >pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase Length = 279 | Back alignment and structure |
|
| >pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus Anthracis Length = 281 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 6e-47
Identities = 41/256 (16%), Positives = 95/256 (37%), Gaps = 19/256 (7%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHY--FNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
++ +HGL + + + + DL G+S P S++ +
Sbjct: 22 TPIIFLHGLSLDK-QSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPISPSTSDNVLETLIE 80
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
+ E ++ L G SYGG++ ++A K++ V + C + + R ++
Sbjct: 81 AIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSK-RLTGKHINI 139
Query: 168 LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI 227
LEE I ++ + + DY + + +E + + +
Sbjct: 140 LEE--DINPVENKEYFADFLSMNVIINNQ-------AWHDYQNLIIPGLQKEDKTFIDQL 190
Query: 228 PKDRKISNID-----KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282
+ + + P I+ G +DQ+ + +L +H +N +++++ + GH
Sbjct: 191 QNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHN-ENGEIVLLNRTGHNL 249
Query: 283 NYEKPKEFYKHLKSFL 298
++ + H FL
Sbjct: 250 MIDQREAVGFHFDLFL 265
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 9e-47
Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 23/263 (8%)
Query: 52 LVLIHGLGANA---LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER---SESFQAEC 105
+VL+HG G A NI P + + V + D +G S A
Sbjct: 39 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSVVNSGSRSDLNARI 96
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
+ V++ + K+ L+G S GG + ++ E++ K+V+ G +
Sbjct: 97 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGI 156
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
L + + LK +M F S + L ++ M + + V+
Sbjct: 157 KRLNQL---YRQPTIENLKLMMDIFVFDT---SDLTDALFEARLNNMLSRR-DHLENFVK 209
Query: 226 AIPKDRKI-----SNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280
++ + K + +I TLI+WG +D+ P++ G RL S + ++L + + GH
Sbjct: 210 SLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGI-AGSELHIFRDCGH 268
Query: 281 AFNYEKPKEFYKHLKSFLLDSQP 303
+E F + + +FL ++P
Sbjct: 269 WAQWEHADAFNQLVLNFL--ARP 289
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A Length = 286 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 1e-46
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 15/257 (5%)
Query: 50 PDLVLIHGLGANA---LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-SESFQAEC 105
++++HG G A + N+ P + + V + D F S + A
Sbjct: 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 93
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
V +M+A + + LVG + GG + A ++ ++I K+++ G M
Sbjct: 94 VKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPM--- 150
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKREL 223
++ K+ S LK++++ + + SL+ LL +A+ E+L+
Sbjct: 151 EGIKLLFKLYAEPSYETLKQMLQVFLYDQ---SLITEELLQGRWEAIQRQPEHLKNFLIS 207
Query: 224 VRAIPKDRK--ISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281
+ P + + +I T I WG D+ PL+ G +L ++ D+A+L V K G
Sbjct: 208 AQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGAW 266
Query: 282 FNYEKPKEFYKHLKSFL 298
+E EF + + FL
Sbjct: 267 AQWEHADEFNRLVIDFL 283
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 Length = 285 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 2e-46
Identities = 54/267 (20%), Positives = 96/267 (35%), Gaps = 22/267 (8%)
Query: 48 SKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDS-----FTTRPERSES 100
P +VL+HG G A W IIP + F V PDL+ FG S +
Sbjct: 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVG 87
Query: 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160
+ E ++ +M ++K +VG S GG V + + E+ +KV + S
Sbjct: 88 MRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARP-- 145
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK 220
+L +EL+ + + ++ + +
Sbjct: 146 -----PELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEE-IVKSRFEVANDPEVRRI 199
Query: 221 RELVRAIPKDRKISN------IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIV 274
+E++ K S + ++ L+ G D+I PL+ L HL +A+L+V
Sbjct: 200 QEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL-KHAELVV 258
Query: 275 IKKAGHAFNYEKPKEFYKHLKSFLLDS 301
+ + GH E+ L +
Sbjct: 259 LDRCGHWAQLERWDAMGPMLMEHFRAA 285
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 9e-46
Identities = 44/258 (17%), Positives = 98/258 (37%), Gaps = 32/258 (12%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
S L+ +HG G N + + ++ Y N + DL G+S P + + V
Sbjct: 14 KSPNTLLFVHGSGCNLKI-FGELEKYLEDY-NCILLDLKGHGESKGQCPSTVYGY-IDNV 70
Query: 107 MRVMEA----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE--EQDLRD 160
+ K ++L+G S GG + +A + + KVV G + ++D +
Sbjct: 71 ANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFME 130
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK 220
+++ + + + G + + +F+ L P +++D + A L +
Sbjct: 131 KIYH----NQLDNNYLLECIGGIDNPLSEKYFET--LEKDPDIMIND-LIACKLIDLVD- 182
Query: 221 RELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280
N+ I P + + + + +E +K + +N++L + + H
Sbjct: 183 --------------NLKNIDIPVKAIVAKDELLTLVEYSEIIKKEV-ENSELKIFETGKH 227
Query: 281 AFNYEKPKEFYKHLKSFL 298
K + +K+F+
Sbjct: 228 FLLVVNAKGVAEEIKNFI 245
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A Length = 282 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-45
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 30/274 (10%)
Query: 48 SKPDLVLIHGLGAN--ALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSE---SFQ 102
++LIHG G A W IP + ++ V PD++ FG + RPE
Sbjct: 24 EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFT--DRPENYNYSKDSW 81
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV-ICCSGVCLEEQDLRDR 161
+ ++ +M+A ++K +VG ++GG + + A ++ E+++++V + +G + + +
Sbjct: 82 VDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNA 141
Query: 162 MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKR 221
++ S ++ L+ + R SLV L +A +E
Sbjct: 142 VWGY-----------TPSIENMRNLLDIFAYDR---SLVTDELARLRYEASIQPGFQESF 187
Query: 222 ELVRAIPKDRKISNID-------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIV 274
+ P+ R I + + TLI+ G DQ+ PL RL + D AQL V
Sbjct: 188 SSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHV 246
Query: 275 IKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLPP 308
+ GH E+ F + + F ++ L
Sbjct: 247 FGRCGHWTQIEQTDRFNRLVVEFFNEANTPKLVG 280
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A Length = 291 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 2e-43
Identities = 55/265 (20%), Positives = 101/265 (38%), Gaps = 26/265 (9%)
Query: 48 SKPDLVLIHGLGANA-LW-QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSES---FQ 102
+ +VL+HG G A W ++ I + +F+V D +G S + +
Sbjct: 35 NDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHS--DKRAEHGQFNRYA 92
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162
A + + + + ++ LVG + GG A + + ++V+ G D
Sbjct: 93 AMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPT 152
Query: 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
++ SK V + L+ +R + + +L+ L+ E
Sbjct: 153 EG---VKRLSKFSVAPTRENLEAFLRVMVYDK---NLITPELVDQRFALA---STPESLT 203
Query: 223 LVRAIPKDRKISNID---------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273
RA+ K ++ + ++ QP L++WG D++ PL+ + AQL
Sbjct: 204 ATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLDGALVALKTI-PRAQLH 262
Query: 274 VIKKAGHAFNYEKPKEFYKHLKSFL 298
V + GH EK EF K FL
Sbjct: 263 VFGQCGHWVQVEKFDEFNKLTIEFL 287
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 3e-42
Identities = 42/255 (16%), Positives = 89/255 (34%), Gaps = 18/255 (7%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS-FTTRPERSESFQAEC 105
+ P LVL+HG ++ W I + Y D++ + + + A
Sbjct: 65 EDAPPLVLLHGALFSS-TMWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDYANW 123
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
++ V + ++K ++GLS GG + + E+++ I +K
Sbjct: 124 LLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFL--PFHHDFYKY 181
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK-RELV 224
+ L + ++ + + +++ + + + +
Sbjct: 182 A--------LGLTASNGVETFLNWMM---NDQNVLHPIFVKQFKAGVMWQDGSRNPNPNA 230
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIF-PLELGRRLKSHLGDNAQLIVIKKAGHAFN 283
P + P L+L GEH+ I+ P R S + + + VIK AGH +
Sbjct: 231 DGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFV-PDIEAEVIKNAGHVLS 289
Query: 284 YEKPKEFYKHLKSFL 298
E+P + + F
Sbjct: 290 MEQPTYVNERVMRFF 304
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 Length = 296 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 4e-42
Identities = 52/271 (19%), Positives = 108/271 (39%), Gaps = 29/271 (10%)
Query: 50 PDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSES--FQAEC 105
++LIHG GA A W N+IP + ++ V D+L FG + +P+ + +
Sbjct: 37 QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKT--AKPDIEYTQDRRIRH 94
Query: 106 VMRVMEAHSVK-KLSLVGLSYGGFVGYSMAAQFKEKIEKVV-ICCSGVCLEEQDLRDRMF 163
+ ++A + K+S+VG S GG G ++ E + +V + +G+ +E + +
Sbjct: 95 LHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPII 154
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
+ + L++ + +++ E +
Sbjct: 155 NY-----------DFTREGMVHLVKALTNDG---FKIDDAMINSRYTYATDEATRKAYVA 200
Query: 224 VRAIPKDRKISNID-----KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA 278
+++ D K+ PTL++ G+ D++ P+E + + D++ +I
Sbjct: 201 TMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHC 259
Query: 279 GHAFNYEKPKEFYKHLKSFLLDSQPSPLPPS 309
GH E P++F SF L + P +
Sbjct: 260 GHWAMIEHPEDFANATLSF-LSLRVDITPAA 289
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A Length = 254 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 4e-42
Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 31/256 (12%)
Query: 49 KPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESF-----Q 102
++L+ G+ + + + ++ F V D +G S P+R
Sbjct: 23 DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHS--RPPDRDFPADFFERD 80
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162
A+ + +M+A KK+SL+G S GG AA++ I K+VI + + ++D
Sbjct: 81 AKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDED----- 135
Query: 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
++++ +++ R PL + DY C ++++ R+
Sbjct: 136 --------------SMIYEGIRDVSKWSERTRKPLEAL---YGYDYFARTCEKWVDGIRQ 178
Query: 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282
+ + ++ P LI+ GE D + P + H+ ++L ++ + H
Sbjct: 179 FKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHV-KGSRLHLMPEGKHNL 237
Query: 283 NYEKPKEFYKHLKSFL 298
+ EF K + FL
Sbjct: 238 HLRFADEFNKLAEDFL 253
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 6e-42
Identities = 47/259 (18%), Positives = 108/259 (41%), Gaps = 10/259 (3%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-SESFQAECV 106
+ LV +HG +++ + N I ++V DL G+ ++ E + + +
Sbjct: 15 TNQVLVFLHGFLSDS-RTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLL 73
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
R+++ + K ++L G S GG V A I +++ + ++E+ + ++
Sbjct: 74 DRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQ-LERRLV 132
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA 226
D A + + + + + F+ +P + ++ + + +R
Sbjct: 133 DDARAKVLDIAGIELFVNDWEKLPLFQSQLE--LPVEIQHQIRQQRLSQSPHKMAKALRD 190
Query: 227 IPKDRKISNID---KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283
+ + +I PTLIL GE+D+ F ++ +++ + + N++ +I GH +
Sbjct: 191 YGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV-QIAKKMANLI-PNSKCKLISATGHTIH 248
Query: 284 YEKPKEFYKHLKSFLLDSQ 302
E EF + FL + Q
Sbjct: 249 VEDSDEFDTMILGFLKEEQ 267
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 Length = 258 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 3e-39
Identities = 50/250 (20%), Positives = 88/250 (35%), Gaps = 9/250 (3%)
Query: 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108
LVL+HG G NA W I + +F +++ DL FG S R + S +
Sbjct: 13 NVHLVLLHGWGLNAEV-WRCIDEELSSHFTLHLVDLPGFGRS---RGFGALSLAD--MAE 66
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL 168
+ + K +G S GG V +A E++ +V S C +D K L
Sbjct: 67 AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARD-EWPGIKPDVL 125
Query: 169 EEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIP 228
+ L ++ + L + A+ ++ + +
Sbjct: 126 AGFQQQLSDDQQRTVERFLALQTMGTETARQDARALK-KTVLALPMPEVDVLNGGLEILK 184
Query: 229 KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPK 288
+ ++ P L L+G D + P ++ L +++ + KA HA P
Sbjct: 185 TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAPFISHPA 243
Query: 289 EFYKHLKSFL 298
EF L +
Sbjct: 244 EFCHLLVALK 253
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} Length = 278 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 2e-37
Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 14/259 (5%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF----QAEC 105
P L + H +++VY+ +L G+S + + +
Sbjct: 24 PPLCVTHLYSEYN-DNGNTFANPFTDHYSVYLVNLKGCGNS--DSAKNDSEYSMTETIKD 80
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF-- 163
+ + EA + K G S GG + A + +E + K+++ + E +D ++
Sbjct: 81 LEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCS 140
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKR-PPLSLVPSCLLSDYIDAMCTEYL--EEK 220
K I+ + + R + +S L + + +
Sbjct: 141 KNVKFNRIVSIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRL 200
Query: 221 RELVRAIPKDRKISNIDK-ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279
+ KD + K + P+ I G+HD P + + + NA L +++
Sbjct: 201 NYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLI-PNATLTKFEESN 259
Query: 280 HAFNYEKPKEFYKHLKSFL 298
H E+ +F + + L
Sbjct: 260 HNPFVEEIDKFNQFVNDTL 278
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} Length = 315 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-37
Identities = 52/297 (17%), Positives = 95/297 (31%), Gaps = 25/297 (8%)
Query: 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLL 85
T M + + ++L+HG A W I + + V D +
Sbjct: 24 DFTSQGQPLSMAYLDVAPKKANGRTILLMHGKNFCA-GTWERTIDVLADAGYRVIAVDQV 82
Query: 86 FFGDSFTTRPERSE---SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIE 142
F S ++P + A ++E V + S++G S GG + A + ++E
Sbjct: 83 GFCKS--SKPAHYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVE 140
Query: 143 KVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202
++V+ + + L V D + + ++ Y RP
Sbjct: 141 RLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQ 200
Query: 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL------ 256
Y I + +D++ PTL+L GE D
Sbjct: 201 MQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPA 260
Query: 257 ----------ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303
+LG+ + A L+ GH + P+ F++ L L +QP
Sbjct: 261 ELKARLGNYAQLGKDAARRI-PQATLVEFPDLGHTPQIQAPERFHQALLEG-LQTQP 315
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* Length = 271 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 5e-36
Identities = 48/268 (17%), Positives = 87/268 (32%), Gaps = 38/268 (14%)
Query: 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS--FTTRPERSESFQ--AE 104
K ++ G G + W + P V + D + G S R ++ A+
Sbjct: 20 KASIMFAPGFGCDQ-SVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQ 78
Query: 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCL--EEQDLRDRM 162
V+ V EA +K+ VG S G +G + + E +V+ C + +
Sbjct: 79 DVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGG- 137
Query: 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
F+ L +++ G + + EE
Sbjct: 138 FEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIK-----------------EELES 180
Query: 223 LVRAIPKD------RKISNID------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNA 270
+ + D K+T P+LIL D I P +G+ + HL +
Sbjct: 181 RFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP-YS 239
Query: 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L ++ GH + P E + + +L
Sbjct: 240 SLKQMEARGHCPHMSHPDETIQLIGDYL 267
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} Length = 282 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 1e-35
Identities = 52/280 (18%), Positives = 101/280 (36%), Gaps = 50/280 (17%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS--FTTRPERSESFQ--A 103
+ ++L HG G + W ++P + F V V D + G S + +R S + A
Sbjct: 27 GEKTVLLAHGFGCDQ-NMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYA 85
Query: 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE--------- 154
+ V ++ A + +S++G S + + ++I + + C C
Sbjct: 86 KDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGG 145
Query: 155 -EQDLRDRMFKV--SDLEEASKILVPQSPGK-----LKELMRYTFFKRPPLSLVPSC--- 203
E+D + + + + + L P G L + +F P+
Sbjct: 146 FERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKAT 205
Query: 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263
SDY R L ++ I+ P LI D + E+G+ +
Sbjct: 206 FFSDY------------RSL------------LEDISTPALIFQSAKDSLASPEVGQYMA 241
Query: 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303
++ N+QL +I+ GH + L F+ ++Q
Sbjct: 242 ENIP-NSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQT 280
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} Length = 314 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 15/254 (5%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER--SESFQAECVM 107
P ++ HG+ +N+ + ++ + F D G S +PE + A+ +
Sbjct: 69 PLMLFFHGITSNS-AVFEPLMIRLSDRFTTIAVDQRGHGLS--DKPETGYEANDYADDIA 125
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE---EQDLRDRMFK 164
++ + LVG S G + AA++ + + VV +E L R+
Sbjct: 126 GLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNA 185
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
S L E K + G+ + R P + + + + +
Sbjct: 186 GSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQP--VDGGLRPLASSAAMAQTARGL 243
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284
R+ +T+P LI+ GE ++ + + ++V+ A H N
Sbjct: 244 RSDLVPA----YRDVTKPVLIVRGESSKLVSAAALAKTSRLR-PDLPVVVVPGADHYVNE 298
Query: 285 EKPKEFYKHLKSFL 298
P+ K + +F+
Sbjct: 299 VSPEITLKAITNFI 312
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} Length = 268 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 6e-34
Identities = 47/264 (17%), Positives = 94/264 (35%), Gaps = 12/264 (4%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-SESFQAECV 106
P +VLI GLG + W + + + V D G++ T E S + A +
Sbjct: 14 DAPVVVLISGLGGS-GSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAEL 72
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
+ + A ++ ++VG + G VG +A + + ++ + + R
Sbjct: 73 HQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRC------ 126
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY-LEEKRELVR 225
+ ++L E + ++ L ++ A+ +
Sbjct: 127 -FQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLN 185
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285
A+ + + D+I P I+ D + P L + L ++Q +V+ GHA N
Sbjct: 186 ALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL-PDSQKMVMPYGGHACNVT 244
Query: 286 KPKEFYKHLKSFLLDSQPSPLPPS 309
P+ F L + L S +
Sbjct: 245 DPETFNALLLNG-LASLLHHREAA 267
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} Length = 266 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 4e-33
Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 39/279 (13%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
+G+ +H + R+ + P +VL + LG + L W + + +F V D G S
Sbjct: 10 NGTELHYRIDGERHGNAPWIVLSNSLGTD-LSMWAPQVAALSKHFRVLRYDTRGHGHSEA 68
Query: 93 TRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152
+ + V+ +M+ + + + GLS GG G ++AA+ ++IE+V +C +
Sbjct: 69 PKGPYTIEQLTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAAR 128
Query: 153 LEEQDL-RDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDA 211
+ ++ R K ++ + + L + +R P
Sbjct: 129 IGSPEVWVPRAVKA-----RTEGMHALADAVLPRWFTADYMEREP--------------- 168
Query: 212 MCTEYLEEKRELVRAIPKD------RKISNID------KITQPTLILWGEHDQIFPLELG 259
L R++ K+ I D I P L++ G HD G
Sbjct: 169 ---VVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQG 225
Query: 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
R L + A+ + + A H N E+ F K + FL
Sbjct: 226 RELAQAIA-GARYVEL-DASHISNIERADAFTKTVVDFL 262
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A Length = 293 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 9e-33
Identities = 38/251 (15%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 50 PDLVLIHGLGAN-ALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108
+V I G G W + + + D G + +++
Sbjct: 44 DPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFTTQTM-VADTAA 102
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS-GVCLEEQDLRDRMFKVSD 167
++E + +VG+S G F+ + E + V+ + G + ++
Sbjct: 103 LIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELY 162
Query: 168 LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI 227
+ +L E + S + R +
Sbjct: 163 DSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGL----RCQLDCA 218
Query: 228 PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP 287
P+ ++ I P L++ D + P LGR + L N + + I AGH +E+P
Sbjct: 219 PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL-PNGRYLQIPDAGHLGFFERP 277
Query: 288 KEFYKHLKSFL 298
+ + F
Sbjct: 278 EAVNTAMLKFF 288
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} Length = 266 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-32
Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 22/256 (8%)
Query: 48 SKPDLVLIHGLGAN-ALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ--AE 104
KP L L + +G +W +P + +F V D G S + P + E
Sbjct: 26 EKPLLALSNSIGTTLHMWDA--QLPALTRHFRVLRYDARGHGAS--SVPPGPYTLARLGE 81
Query: 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
V+ +++A V++ +GLS GG VG +A ++IE++V+ + L D
Sbjct: 82 DVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIA 141
Query: 165 VSDLEEASKILVPQSPGKLKELMRYT--FFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
E G + +R ++ + +
Sbjct: 142 AVLQAEDMSETAAGFLGNW-----FPPALLERAEP------VVERFRAMLMATNRHGLAG 190
Query: 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282
A+ + + +I +PTL++ G +D + G + + + A+L+ + A H
Sbjct: 191 SFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIA-GARLVTL-PAVHLS 248
Query: 283 NYEKPKEFYKHLKSFL 298
N E P+ F + SFL
Sbjct: 249 NVEFPQAFEGAVLSFL 264
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* Length = 276 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 4e-32
Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 14/273 (5%)
Query: 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFG 88
L + + ++ R+ P ++L+ G + + +I + F V VP+ G
Sbjct: 8 ETLVFDNKLS-YIDNQRDTDGPAILLLPGWCHDH-RVYKYLIQELDADFRVIVPNWRGHG 65
Query: 89 DSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVIC 147
S + P+ Q + + +++ V+ V S+GG+V + Q E+ + +I
Sbjct: 66 LSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIM 125
Query: 148 CSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL--L 205
+ + D + + D E + L + L +
Sbjct: 126 DWLMWAPKPDFAKSLTLLKDPERWREGTHG--------LFDVWLDGHDEKRVRHHLLEEM 177
Query: 206 SDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265
+DY + ++ T+P ++ + + ++
Sbjct: 178 ADYGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQ 237
Query: 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ H + P H++ F
Sbjct: 238 H-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFA 269
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A Length = 255 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 4e-32
Identities = 49/253 (19%), Positives = 93/253 (36%), Gaps = 13/253 (5%)
Query: 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAEC 105
+ +VL+HGL + + +++ N+ D+ G S P + A+
Sbjct: 13 QHNNSPIVLVHGLFGSLDN-LGVLARDLVNDHNIIQVDVRNHGLSPRE-PVMNYPAMAQD 70
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
++ ++A + K + +G S GG ++ A ++I+K+V D +F
Sbjct: 71 LVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAA 130
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
+ S Q+ + +MR + V LL ++D E+ L
Sbjct: 131 INAVSESDA---QTRQQAAAIMR----QHLNEEGVIQFLLKSFVD---GEWRFNVPVLWD 180
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285
P I P L + G + + L + A+ VI AGH + E
Sbjct: 181 QYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF-PQARAHVIAGAGHWVHAE 239
Query: 286 KPKEFYKHLKSFL 298
KP + ++ +L
Sbjct: 240 KPDAVLRAIRRYL 252
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} Length = 281 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 7e-32
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 19/260 (7%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECV 106
+VLIHG + W +P ++ + V D FG S ++P + +
Sbjct: 28 KPVVLIHGWPLSG-RSWEYQVPALVEAGYRVITYDRRGFGKS--SQPWEGYEYDTFTSDL 84
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCS--GVCLEEQDLRDRMF 163
+++E ++ ++LVG S GG + + ++IEKVV + + +D +
Sbjct: 85 HQLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGAL 144
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-----YLE 218
+ +E ++ L E + FF + + S Y + L+
Sbjct: 145 DDATIETFKSGVINDRLAFLDEFTK-GFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLD 203
Query: 219 EKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA 278
+ + ++K PTLI+ G+ D P E +L N+++ +IK
Sbjct: 204 CITAFSKTDFRKD----LEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGG 259
Query: 279 GHAFNYEKPKEFYKHLKSFL 298
H N KEF + L FL
Sbjct: 260 PHGLNATHAKEFNEALLLFL 279
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-30
Identities = 37/254 (14%), Positives = 80/254 (31%), Gaps = 12/254 (4%)
Query: 49 KPDLVLIHGLGANA-LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT-RPERSESFQAECV 106
P V + G G + + NII + + D G S + + +
Sbjct: 41 NPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRDWVNAI 100
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV-ICCSGVCLEEQDLRDRMFKV 165
+ + E + L S GGF + Q + + + + V + ++
Sbjct: 101 LMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQ 160
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC-LLSDYIDAMCTEYLEEKRELV 224
L LK+L R F + L ++ + + L + + +
Sbjct: 161 LALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDV--QSLPDFKIRL 218
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284
+D K +KI P+++ + LE + +LI+ H ++
Sbjct: 219 ALGEEDFKTGISEKI--PSIVFSESFREKEYLE--SEYLNKHT-QTKLILC-GQHHYLHW 272
Query: 285 EKPKEFYKHLKSFL 298
+ + ++ L
Sbjct: 273 SETNSILEKVEQLL 286
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} PDB: 1va4_A 3hi4_A 3hea_A Length = 271 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-30
Identities = 54/278 (19%), Positives = 111/278 (39%), Gaps = 14/278 (5%)
Query: 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDL 84
S+ +DG+ ++ K KP ++ HG +A W + ++ + D
Sbjct: 1 STFVA-KDGTQIYF---KDWGSGKP-VLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDR 54
Query: 85 LFFGDSFTTRPERSESFQ--AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKI 141
FG S +P + A+ + +++E +K+++LVG S GG A+ ++
Sbjct: 55 RGFGRS--DQPWTGNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARV 112
Query: 142 EKVVICCSGV-CLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200
+V+ + ++ + + L+ + + F+ +V
Sbjct: 113 AGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDFNA-PFYGINKGQVV 171
Query: 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260
+ + + L+ + V A + ++ KI PTL++ G+ DQI P E
Sbjct: 172 SQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTG 231
Query: 261 RLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
++ + L A+L V K A H F ++ + L +FL
Sbjct: 232 KVAAELIKGAELKVYKDAPHGFAVTHAQQLNEDLLAFL 269
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 Length = 273 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-29
Identities = 47/279 (16%), Positives = 101/279 (36%), Gaps = 14/279 (5%)
Query: 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDL 84
++ T +DG+ ++ K +P +V HG NA W + + + + V D
Sbjct: 1 TTFTT-RDGTQIYY---KDWGSGQP-IVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDR 54
Query: 85 LFFGDSFTTRPERSESFQ--AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKI 141
G S ++P A+ + +++E ++ L G S GG + ++
Sbjct: 55 RGHGRS--SQPWSGNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARV 112
Query: 142 EKVVICCSGV-CLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200
K + + + + + + + + + K+L FF
Sbjct: 113 AKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAK 172
Query: 201 PSCLLSDYIDAMC-TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259
S + D+ + + ++A + ++ KI PTL++ G+ DQ+ P+E
Sbjct: 173 SSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEAS 232
Query: 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ L + L + A H + L +F+
Sbjct: 233 GIASAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* Length = 279 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-29
Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 13/256 (5%)
Query: 52 LVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECVMR 108
+VLIHG + W ++ + V D FG S ++ + A +
Sbjct: 26 VVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGS--SKVNTGYDYDTFAADLHT 82
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCSGV-CLEEQDLRDRMFKVS 166
V+E ++ + LVG S G A++ E++ K+ S L ++D
Sbjct: 83 VLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQE 142
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS-CLLSDYIDAMCTEYLEEKRELVR 225
+ + + + L S ++ + +V
Sbjct: 143 VFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVP 202
Query: 226 AIPKDRK--ISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSHLGDNAQLIVIKKAGHAF 282
A +D + + + +PTLIL G D I P++ RR + A + ++ A H
Sbjct: 203 AWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV-PEADYVEVEGAPHGL 261
Query: 283 NYEKPKEFYKHLKSFL 298
+ E LK+FL
Sbjct: 262 LWTHADEVNAALKTFL 277
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 Length = 274 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-27
Identities = 46/258 (17%), Positives = 90/258 (34%), Gaps = 14/258 (5%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECV 106
+V IHG N W + + ++ + D G S T F A+ +
Sbjct: 20 RPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHS--TPVWDGYDFDTFADDL 76
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCSGV-CLEEQDLRDRMFK 164
++ ++ ++LV S GG + ++ V+ + + + D
Sbjct: 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY-LEEKREL 223
+ ++ + K+ FF + D M +E
Sbjct: 137 DEVFDALKNGVLTERSQFWKDTAE-GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRC 195
Query: 224 VRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRLKSHLGDNAQLIVIKKAGHAF 282
V A ++ K PTL++ G+ DQ+ P++ GR+ + NA+L V + + H
Sbjct: 196 VDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIP-NAELKVYEGSSHGI 254
Query: 283 NY--EKPKEFYKHLKSFL 298
++F + L FL
Sbjct: 255 AMVPGDKEKFNRDLLEFL 272
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A Length = 277 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-27
Identities = 48/257 (18%), Positives = 84/257 (32%), Gaps = 17/257 (6%)
Query: 52 LVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECVMR 108
+VLIHG + W ++ + V D FG S ++P + A +
Sbjct: 26 VVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQS--SQPTTGYDYDTFAADLNT 82
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCS--GVCLEEQDLRDRMFKV 165
V+E ++ LVG S G + + +I KV S L+ D D
Sbjct: 83 VLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQ 142
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEE----KR 221
+ + + L S + +
Sbjct: 143 EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRIS---EEAVRNSWNTAASGGFFAAA 199
Query: 222 ELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281
D + ++I +I P LIL G D+ P+E R+ +A+ + ++ A H
Sbjct: 200 AAPTTWYTDFR-ADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHG 258
Query: 282 FNYEKPKEFYKHLKSFL 298
+ +E L +FL
Sbjct: 259 LLWTHAEEVNTALLAFL 275
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} Length = 285 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-27
Identities = 43/296 (14%), Positives = 98/296 (33%), Gaps = 39/296 (13%)
Query: 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD 83
+ DG +H + S+P ++ + GL NA + ++ + + V P+
Sbjct: 5 YEDRYWTSSDGLRLHFRA-YEGDISRPPVLCLPGLTRNA-RDFEDLATRLAGDWRVLCPE 62
Query: 84 LLFFGDSFTTRPERSESFQ----AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139
+ GDS + ++Q + + ++ +++ +G S GG + +AA
Sbjct: 63 MRGRGDS--DYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPA 120
Query: 140 KIEKVVICCSGVCLEEQDLR------DRMFKVSDLEEASKIL--------VPQSPGKLKE 185
+I V+ G + + L + A++ L +
Sbjct: 121 RIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLR 180
Query: 186 LMRYTFFKRPPLSLVPSC---LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP 242
+ + + + + + L A+ T+P
Sbjct: 181 YAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDAL-----------ATRP 229
Query: 243 TLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L+L GE I + ++ S +L+ + + GHA ++P+ + L
Sbjct: 230 LLVLRGETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLL 282
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-27
Identities = 44/271 (16%), Positives = 88/271 (32%), Gaps = 38/271 (14%)
Query: 44 TRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ 102
P +VL+HGL + W ++ H+ DL G + +
Sbjct: 11 KPTARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEA- 68
Query: 103 AECVMRVMEAH--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICC---SGVCLEEQD 157
E + + ++AH S + LVG S GG + AQ + L+E +
Sbjct: 69 VEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENE 128
Query: 158 LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL----------LSD 207
+ ++ D + A + L + + F + + ++
Sbjct: 129 EKAARWQH-DQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAH 187
Query: 208 YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG 267
+ A ++A + P + GE D F +L
Sbjct: 188 MLLATSLAKQPYLLPALQA------------LKLPIHYVCGEQDSKFQ-QLAESS----- 229
Query: 268 DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ +AGH ++E+P+ F K +++ +
Sbjct: 230 -GLSYSQVAQAGHNVHHEQPQAFAKIVQAMI 259
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* Length = 298 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-27
Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 42/285 (14%)
Query: 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSE-SFQ 102
+ + P L+L+ G +AL W + + +V D G S T F
Sbjct: 20 DPADPALLLVMGGNLSALG-WPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFG 78
Query: 103 --AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160
A + V++ V + +VGLS G + +A +++ + + G + D
Sbjct: 79 ELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANI 138
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT------ 214
+ + PG + + P + ++ +
Sbjct: 139 E------RVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAA-EVAKRVSKWRILSGTGV 191
Query: 215 -EYLEEKRELVRAIPKDRKISN--------------------IDKITQPTLILWGEHDQI 253
E D + ++T PTL++ EHD I
Sbjct: 192 PFDDAEYARWEERAI-DHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPI 250
Query: 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
P G+ L + A+L I GHA + + +
Sbjct: 251 APAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVILAHT 294
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A Length = 276 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-25
Identities = 46/261 (17%), Positives = 80/261 (30%), Gaps = 21/261 (8%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECV 106
P + HG +A W + + H + V D G S ++ A+ V
Sbjct: 23 PVIHFHHGWPLSA-DDWDAQLLFFLAHGYRVVAHDRRGHGRS--SQVWDGHDMDHYADDV 79
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK-IEKVVICCSGV-CLEEQDLRDRMFK 164
V+ ++ VG S GG A+ E + K V+ + + +
Sbjct: 80 AAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLP 139
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY-LEEKREL 223
S + + +++ F+ + S + + +
Sbjct: 140 KSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDG 199
Query: 224 VRAIPKDRKISNID------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK 277
+ A S D I QP L++ G+ DQI P E L + L N L K
Sbjct: 200 IVAF------SQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKG 253
Query: 278 AGHAFNYEKPKEFYKHLKSFL 298
H L +F+
Sbjct: 254 YPHGMPTTHADVINADLLAFI 274
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A Length = 456 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-25
Identities = 48/260 (18%), Positives = 81/260 (31%), Gaps = 23/260 (8%)
Query: 52 LVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECVMR 108
+VLIHG + W ++ + V D FG S ++P + A +
Sbjct: 27 VVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQS--SQPTTGYDYDTFAADLNT 83
Query: 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCS--GVCLEEQDLRDRMFKV 165
V+E ++ LVG S G + + +I V S L+ D D
Sbjct: 84 VLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQ 143
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
+ + + L S + + +
Sbjct: 144 EFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRIS---EEAVRNS---WNTAASGGFF 197
Query: 226 AIPKDRKISNID------KITQPTLILWGEHDQIFPLE-LGRRLKSHLGDNAQLIVIKKA 278
A D +I P LIL G D+ P+E R L +A+ + ++ A
Sbjct: 198 AAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALP-SAEYVEVEGA 256
Query: 279 GHAFNYEKPKEFYKHLKSFL 298
H + +E L +FL
Sbjct: 257 PHGLLWTHAEEVNTALLAFL 276
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A Length = 286 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-25
Identities = 37/290 (12%), Positives = 87/290 (30%), Gaps = 21/290 (7%)
Query: 19 FKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGAN-ALWQ----WTNIIPHM 73
+ + GSV V T +P + H +G N + +
Sbjct: 6 IHHHHHHTHSVETPYGSV-TFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEI 64
Query: 74 IHYFNVYVPDLLFFGDSFTTRPERSESF----QAECVMRVMEAHSVKKLSLVGLSYGGFV 129
I F D + P + A+ + +++ + + VG+ G ++
Sbjct: 65 IQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYI 124
Query: 130 GYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRY 189
A + +E +V+ + K++ L + ++ +EL
Sbjct: 125 LSRYALNHPDTVEGLVLINIDPNAKGWMDWAA-HKLTGLTSSIPDMILGHLFSQEELSGN 183
Query: 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249
+ + ++ + I+ Y R + +R + P +++ G+
Sbjct: 184 SELIQKYRGIIQHAPNLENIELYWNSYNN-----RRDLNFER--GGETTLKCPVMLVVGD 236
Query: 250 HDQIFPLELGRRLKSHL-GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ S L + + +G +P + + K FL
Sbjct: 237 QAP--HEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFL 284
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} Length = 262 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-25
Identities = 44/266 (16%), Positives = 85/266 (31%), Gaps = 46/266 (17%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRV 109
P +VL+ G + + + +F V D GDS T P E E + +
Sbjct: 24 PPVVLVGGALSTR-AGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVERE-IEDLAAI 81
Query: 110 ME-----AHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE------QDL 158
++ A + G+S G + AA I ++ + +++ D
Sbjct: 82 IDAAGGAAF------VFGMSSGAGLSLLAAASGLP-ITRLAVFEPPYAVDDSRPPVPPDY 134
Query: 159 RDRMFKV---SDLEEASKILVPQ---SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212
+ R+ + +A + + P L M+ ++ + Y A+
Sbjct: 135 QTRLDALLAEGRRGDAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLP---YDHAV 191
Query: 213 CTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQL 272
+ IP R I+ PTL++ G + + L + NA+
Sbjct: 192 MGD---------NTIPTAR----FASISIPTLVMDGGASPAWIRHTAQELADTI-PNARY 237
Query: 273 IVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ ++ H P L F
Sbjct: 238 VTLENQTHT---VAPDAIAPVLVEFF 260
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} Length = 330 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 2e-24
Identities = 52/280 (18%), Positives = 97/280 (34%), Gaps = 26/280 (9%)
Query: 40 WVPKTRNDSKPDLVLIHGL-GANALWQWTNIIPHM--IHYFNVYVPDLLFFGDSFTTRPE 96
P+ L+++HG G + I + V D + G+S T P+
Sbjct: 45 TTPENAQPHALPLIVLHGGPGMAHNYVAN--IAALADETGRTVIHYDQVGCGNS-THLPD 101
Query: 97 RSESF-----QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151
F + V A +++ ++G S+GG +G +A + + + IC S
Sbjct: 102 APADFWTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPA 161
Query: 152 CLEE-----QDLRDRMFK--VSDLEEASKILVPQSPGKLKELM----RYTFFKRPPLSLV 200
+ DLR ++ + L+ P L+ R+ P
Sbjct: 162 SMRLWSEAAGDLRAQLPAETRAALDRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDF 221
Query: 201 PSCLLSDYIDAMCTEYLEEKRELVR--AIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258
+ + + E + I + +T P L++ GEHD+ P +
Sbjct: 222 ADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIAGEHDEATP-KT 280
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ H+ + + V H + EKP+EF + FL
Sbjct: 281 WQPFVDHI-PDVRSHVFPGTSHCTHLEKPEEFRAVVAQFL 319
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 98.7 bits (245), Expect = 1e-23
Identities = 48/299 (16%), Positives = 91/299 (30%), Gaps = 44/299 (14%)
Query: 42 PKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFN--------VYVPDLLFFGDSFTT 93
++R ++ +LV +HG G + + W +P ++ V + D + GDS
Sbjct: 45 RRSRTATRLNLVFLHGSGMSKVV-WEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVR 103
Query: 94 RPERSESF-----QAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIE 142
R + A V+++ ++G S GGF +
Sbjct: 104 NRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFH 163
Query: 143 KVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL------KELMRYTFFKRPP 196
+++ V + R D + + L K +
Sbjct: 164 LLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSF 223
Query: 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPK-----------------DRKISNIDKI 239
+ S +L + ID T+ + + K ISN+ +
Sbjct: 224 FTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISNVKFV 283
Query: 240 TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ T+ + G P + L+ L N L VI H N E P + + +
Sbjct: 284 RKRTIHIVGARSNWCPPQNQLFLQKTLQ-NYHLDVIPGGSHLVNVEAPDLVIERINHHI 341
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 Length = 275 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-23
Identities = 50/259 (19%), Positives = 82/259 (31%), Gaps = 21/259 (8%)
Query: 52 LVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AECVMR 108
+V HG +A W N + + H + V D G S +P A V
Sbjct: 24 VVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRS--DQPSTGHDMDTYAADVAA 80
Query: 109 VMEAHSVKKLSLVGLSYGG-FVGYSMAAQFKEKIEKVVICCS-GVCLEEQDLRDRMFKVS 166
+ EA ++ +G S GG V +A ++ K V+ + + + D +
Sbjct: 81 LTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLE 140
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVR 225
+E L ++ F+ S L D+ E +
Sbjct: 141 VFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIA 200
Query: 226 AIPKDRKISNID------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279
A S D +I P L+ G DQ+ P + L NA L +
Sbjct: 201 AF------SETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLP 254
Query: 280 HAFNYEKPKEFYKHLKSFL 298
H P+ L +F+
Sbjct: 255 HGMLSTHPEVLNPDLLAFV 273
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} Length = 264 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 2e-23
Identities = 36/260 (13%), Positives = 77/260 (29%), Gaps = 26/260 (10%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF--QAEC 105
P L L+ G + + N+ P + F+V PD A+
Sbjct: 20 HAPTLFLLSGWCQDH-RLFKNLAPLLARDFHVICPDWRGHDAK--QTDSGDFDSQTLAQD 76
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKVVICCSGVCLEEQDLRDRMFK 164
++ ++A ++ +V S+G +V + Q ++ K +I + +
Sbjct: 77 LLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAE- 135
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
Q P + R +FF + + +L+ + M + E +
Sbjct: 136 ------------GQHPTEYVA-GRQSFFDEWAETTDNADVLNHLRNEMPWFHGEMWQRAC 182
Query: 225 RAIPKDRKISNID------KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA 278
R I + + +P + + + I
Sbjct: 183 REIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFAAGHSWFHPRHIPGR 242
Query: 279 GHAFNYEKPKEFYKHLKSFL 298
H + E P + ++ FL
Sbjct: 243 THFPSLENPVAVAQAIREFL 262
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} Length = 330 | Back alignment and structure |
|---|
Score = 96.8 bits (241), Expect = 3e-23
Identities = 41/292 (14%), Positives = 94/292 (32%), Gaps = 51/292 (17%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
+ S P ++ +HG G NA W +I + DL G S
Sbjct: 68 QAGAISAL---RWGGSAPRVIFLHGGGQNAHT-WDTVIVGLGEP--ALAVDLPGHGHSAW 121
Query: 93 TRPERSESFQ--AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC--- 147
R + + S Q +E + V+ + +VG+S GG +AA + + ++V+
Sbjct: 122 -REDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVT 180
Query: 148 ---------CSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG----KLKELMRYTFFKR 194
+ L + + + + +P L+ + + +
Sbjct: 181 PSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRL 240
Query: 195 PPLSLV----PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250
+ V D+ ++D ++ P ++ G
Sbjct: 241 DNGNWVWRYDAIRTFGDFAGLW---------------------DDVDALSAPITLVRGGS 279
Query: 251 DQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302
+ L + +++K+GH+ ++P+ + ++ LD++
Sbjct: 280 SGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGV-LDTR 330
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} Length = 309 | Back alignment and structure |
|---|
Score = 95.1 bits (237), Expect = 8e-23
Identities = 47/287 (16%), Positives = 99/287 (34%), Gaps = 29/287 (10%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ--AE 104
S ++ +HG ++ + W NIIP+++ + PDL+ GDS +P+ Q
Sbjct: 28 SGQPVLFLHGNPTSS-YLWRNIIPYVVAAGYRAVAPDLIGMGDS--AKPDIEYRLQDHVA 84
Query: 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
+ ++A + + LV +G +G A +++ V + +
Sbjct: 85 YMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFM-EALVPPALPMPSYEAM 143
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKR--PPLSLVPSCLLSD-----YIDAMCT-EY 216
L + L G+ L F + P + +V S LS+ Y T +
Sbjct: 144 GPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRS--LSEAEMAAYRAPFPTRQS 201
Query: 217 LEEKRELVRAIPKDRKISNID-----------KITQPTLILWGEHDQIFPLELGRRLKSH 265
+ R +P + + + P L+ E + P + L +
Sbjct: 202 RLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKLLFHAEPGALAPKPVVDYLSEN 261
Query: 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLPPSNQS 312
+ N ++ + H + P + + +L ++P +
Sbjct: 262 V-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHASLEHHHH 307
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A Length = 299 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 2e-22
Identities = 47/273 (17%), Positives = 91/273 (33%), Gaps = 35/273 (12%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ--AEC 105
++ +HG ++ + W NIIPH+ PDL+ G S +P+ F
Sbjct: 31 DGTPVLFLHGNPTSS-YLWRNIIPHVAPSHRCIAPDLIGMGKS--DKPDLDYFFDDHVRY 87
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
+ +EA ++++ LV +G +G+ A + E+++ + D +
Sbjct: 88 LDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFAR- 146
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFF---KRPPLSLVPSCLLSD-----YIDAMCT-EY 216
++ +EL+ P +V L++ Y +
Sbjct: 147 ------ETFQAFRTADVGRELIIDQNAFIEGALPKCVVRP--LTEVEMDHYREPFLKPVD 198
Query: 217 LEEKRELVRAIPKDRKISNID-----------KITQPTLILWGEHDQIFPLELGRRLKSH 265
E +P + +NI + P L+ WG + P RL
Sbjct: 199 REPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAES 258
Query: 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L N + + I H + P + +L
Sbjct: 259 L-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 290
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* Length = 316 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 3e-22
Identities = 45/273 (16%), Positives = 91/273 (33%), Gaps = 28/273 (10%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ--AECVM 107
P ++ +HG ++ W NI+P + + PDL+ FG S +P+ + F +
Sbjct: 30 PVVLFLHGNPTSS-HIWRNILPLVSPVAHCIAPDLIGFGQS--GKPDIAYRFFDHVRYLD 86
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC---CSGVCLEEQDLRDRMFK 164
+E V LV +G + + +AA+ + + + ++ + +
Sbjct: 87 AFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEE 146
Query: 165 VSDLEEASKILVP-QSPGKLKELMR-YTFFKRPPLSLVPSCLLSD-----YIDAMCT-EY 216
E A + ++PG+ + ++ F L L D Y T E
Sbjct: 147 QDHAEAARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPES 206
Query: 217 LEEKRELVRAIPKDRK-ISNID----------KITQPTLILWGEHDQIFPLELGRRLKSH 265
R +P + + + P L+ GE + E R +
Sbjct: 207 RRPVLAFPRELPIAGEPADVYEALQSAHAALAASSYPKLLFTGEPGALVSPEFAERFAAS 266
Query: 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L LI + H + + + ++
Sbjct: 267 L-TRCALIRLGAGLHYLQEDHADAIGRSVAGWI 298
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} Length = 286 | Back alignment and structure |
|---|
Score = 90.6 bits (225), Expect = 2e-21
Identities = 44/272 (16%), Positives = 81/272 (29%), Gaps = 20/272 (7%)
Query: 46 NDSKPDLVLIHG-LGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF--- 101
P L ++HG G NA + + F V D G S P+ F
Sbjct: 22 PVEGPALFVLHGGPGGNAYV-LREGLQDYLEGFRVVYFDQRGSGRS-LELPQDPRLFTVD 79
Query: 102 -QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160
E + + EA V++ L+ +G V + +F + +++
Sbjct: 80 ALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARLA 139
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK 220
++ L + LK F R + +++ +
Sbjct: 140 EAAGLAPLPDPE----ENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDA 195
Query: 221 RELVRAIPKDRKISNID---KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK 277
L ++ +P +L GE D A + V+ +
Sbjct: 196 PGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYPYAEEVAS---RLRAPIRVLPE 252
Query: 278 AGHAFNYEKPKEFYKHLKSFL---LDSQPSPL 306
AGH + P+ F + K L + + PL
Sbjct: 253 AGHYLWIDAPEAFEEAFKEALAALVPALRGPL 284
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A Length = 310 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 2e-20
Identities = 41/287 (14%), Positives = 94/287 (32%), Gaps = 52/287 (18%)
Query: 47 DSKPDLVLIHGLGANALW--QWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQA 103
D++ + +HG W + +IP V PD FG S +P E +
Sbjct: 45 DAEDVFLCLHG---EPTWSYLYRKMIPVFAESGARVIAPDFFGFGKS--DKPVDEEDYTF 99
Query: 104 ECVMRVMEA----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR 159
E + A ++ ++LV +GGF+G ++ + ++++I + + +
Sbjct: 100 EFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTD----- 154
Query: 160 DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSL------VPSCLLSDYIDAMC 213
+ + + P +Y L L L A
Sbjct: 155 -------PVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLTEAEASAYA 207
Query: 214 TEYLEEK-----RELVRAIPKDRKISNI----------DKITQPTLILWGEHDQIFPLEL 258
+ + R+ + + + + + T + G D++ ++
Sbjct: 208 APFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDV 267
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNY---EKPKEFYKHLKSFLLDSQ 302
+K+ + + + I AGH + + + LK F +++
Sbjct: 268 MYPMKALINGCPEPLEIADAGH---FVQEFGEQVAREALKHF-AETE 310
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A Length = 304 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 6e-20
Identities = 53/299 (17%), Positives = 98/299 (32%), Gaps = 51/299 (17%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF------ 101
S P L+L+HG N W + P + + + V DL +G S ++P +
Sbjct: 24 SGPALLLLHGFPQNL-HMWARVAPLLANEYTVVCADLRGYGGS--SKPVGAPDHANYSFR 80
Query: 102 -QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS---GVCLEEQD 157
A +M ++ LVG + GG G+ MA + + + + V EE D
Sbjct: 81 AMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVD 140
Query: 158 LRDR--------MFKVSDLEEASKILVPQSPGKLKELMRYTFFKR--PPLSLVPSCLLSD 207
+ + + E ++ P F L +
Sbjct: 141 RFVARAYWHWYFLQQPAPYPEK---VIGADPD---TFYEGCLFGWGATGADGFDPEQLEE 194
Query: 208 YID---------AMCTEYLEEKRELVRAIPK-DRKISNID---KITQPTLILWGEHDQIF 254
Y C +Y RA D ++ + D ++ P L+ G +
Sbjct: 195 YRKQWRDPAAIHGSCCDY--------RAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMH 246
Query: 255 PLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLPPSNQSA 313
L + + + N + + GH F P + + L+ FL D++ + +
Sbjct: 247 SLFEMQVVWAPRLANMRFASL-PGGHFFVDRFPDDTARILREFLSDARSGIHQTERRES 304
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P Length = 316 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 2e-19
Identities = 48/275 (17%), Positives = 94/275 (34%), Gaps = 22/275 (8%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPE--RSESFQ 102
P L+L+HG G +AL W +I + DL G++ PE +E+
Sbjct: 36 SEGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMA 94
Query: 103 A--ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ-FKEKIEKVVICC-------SGVC 152
V+ M + L+G S GG + A+ + + + +
Sbjct: 95 KDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALN 154
Query: 153 LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212
+ LR R LE A + V + E R + + + D
Sbjct: 155 SMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHP 214
Query: 213 CTEY--LEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA 270
T L + + + + P L+L D++ +++
Sbjct: 215 YTWRIELAKTEKYWDGWFRG-LSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGK----F 269
Query: 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSP 305
Q+ V+ + GHA + + P + + + +FL+ + +
Sbjct: 270 QMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAE 304
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A Length = 306 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 2e-19
Identities = 59/282 (20%), Positives = 92/282 (32%), Gaps = 48/282 (17%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF-------Q 102
P L+L+HG W + P + F V V DL +G S PE E
Sbjct: 34 PPLLLLHGFPQTH-VMWHRVAPKLAERFKVIVADLPGYGWS--DMPESDEQHTPYTKRAM 90
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR- 161
A+ ++ ME +L G + G V Y +A ++ K+ + E +R
Sbjct: 91 AKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRA 150
Query: 162 ----------MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYID- 210
+ + + L E L+ P + ++ + LS + Y
Sbjct: 151 YALKIYHWSFLAQPAPLPEN---LLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIA 207
Query: 211 --------AMCTEYLEEKRELVRAIP-KDRKISNID-----KITQPTLILWGEHDQIFPL 256
MC +Y RA D + ID KI P L LWG
Sbjct: 208 FADPMRRHVMCEDY--------RAGAYADFEHDKIDVEAGNKIPVPMLALWGASGIAQSA 259
Query: 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ + Q I ++GH E P + + L F
Sbjct: 260 ATPLDVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRFF 300
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} Length = 297 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 7e-19
Identities = 46/299 (15%), Positives = 99/299 (33%), Gaps = 54/299 (18%)
Query: 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLL 85
+G MH +V + D++ + +HG + + + + ++P V PDL
Sbjct: 25 EGLPGFEGLRMH-YVDEGPRDAEHTFLCLHGEPSWS-FLYRKMLPVFTAAGGRVVAPDLF 82
Query: 86 FFGDSFTTRPERSESFQAECVMRVMEA----HSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
FG S +P + R + A +++++LV +GG +G ++ + +
Sbjct: 83 GFGRS--DKPTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLV 140
Query: 142 EKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP--PLSL 199
+++++ + + V SPGK E R P +
Sbjct: 141 DRLIVMNTA-----------------------LAVGLSPGKGFESWRDFVANSPDLDVGK 177
Query: 200 VPSCLLSDYIDAMCTEYLEE---------KRELVRAIPKDRKISNID-----------KI 239
+ + DA Y R +P + + +
Sbjct: 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQW 237
Query: 240 TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ PT + G D + E+ L+ + + ++++ GH L +F
Sbjct: 238 SGPTFMAVGAQDPVLGPEVMGMLRQAIRGCPEPMIVEAGGHFVQEHGEPIARAALAAFG 296
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A Length = 301 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 7e-19
Identities = 45/279 (16%), Positives = 89/279 (31%), Gaps = 44/279 (15%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ--AEC 105
P ++L+HG G ++W ++P + F V PDL G S P+ S + A
Sbjct: 29 QGPLVMLVHGFGQTW-YEWHQLMPELAKRFTVIAPDLPGLGQS--EPPKTGYSGEQVAVY 85
Query: 106 VMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC---CSGVCLEEQDLRDR 161
+ ++ S + LV G + Y M + + I ++V +
Sbjct: 86 LHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTA 145
Query: 162 MFKVSDLEEASKILVPQSPGKLKELM----RYTFFKR------PPLSLVPSCLLSDYIDA 211
+ + +L E + F + + LL Y +
Sbjct: 146 QGESL----VWHFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARS 201
Query: 212 ---------MCTEYLEEKRELVRAIPKDRKISNID---KITQPTLILWGEHDQIFPLELG 259
Y RA+ + + + ++ PT+ L G
Sbjct: 202 YAKPHSLNASFEYY--------RALNESVRQNAELAKTRLQMPTMTLAGGGAGGMGTFQL 253
Query: 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
++K++ ++ + V+ GH E + + FL
Sbjct: 254 EQMKAY-AEDVEGHVLPGCGHWLPEECAAPMNRLVIDFL 291
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A Length = 293 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 1e-18
Identities = 49/280 (17%), Positives = 105/280 (37%), Gaps = 42/280 (15%)
Query: 46 NDSKPDLVLIHGL-GANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSE---SF 101
+ K L+ +HG G + + ++ V D G S P++S+ +
Sbjct: 25 PEEKAKLMTMHGGPGMSHDY-LLSLRDMTKEGITVLFYDQFGCGRS--EEPDQSKFTIDY 81
Query: 102 QAECVMRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCL---EEQD 157
E + +K+ L+G SYGG + + A ++++ ++ +++ SG
Sbjct: 82 GVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIV--SGGLSSVPLTVK 139
Query: 158 LRDRMFK------VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDA 211
+R+ +++ ++P + +E + Y + + D+
Sbjct: 140 EMNRLIDELPAKYRDAIKKYGSSGSYENP-EYQEAVNYFYHQH-------LLRSEDWPPE 191
Query: 212 MCTEYLEEKRELV---RAIPKDRKIS----------NIDKITQPTLILWGEHDQIFPLEL 258
+ +R V P + I+ I I PTLI GE+D++ P +
Sbjct: 192 VLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NV 250
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
R + + ++L V + H +E + + K L F+
Sbjct: 251 ARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFI 289
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 Length = 294 | Back alignment and structure |
|---|
Score = 83.1 bits (206), Expect = 1e-18
Identities = 51/277 (18%), Positives = 97/277 (35%), Gaps = 37/277 (13%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF------ 101
+ P L+L+HG W+W+ +I + +++V VPDL FGDS +P+ ++
Sbjct: 28 AGPTLLLLHGWPGFW-WEWSKVIGPLAEHYDVIVPDLRGFGDS--EKPDLNDLSKYSLDK 84
Query: 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS---GVCLEEQDL 158
A+ +++A ++K +VG + V + ++ +++ K I L
Sbjct: 85 AADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGL 144
Query: 159 RDRM-------FKVSDLEEASKILVPQSPGKLKELMRYTFFKR-PPLSLVPSCLLSDYID 210
++ E +V S K+ ++ F L+ L ++D
Sbjct: 145 GHVHESWYSQFHQLDMAVE----VVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVD 200
Query: 211 ---------AMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261
Y R +R + P ++WG D P
Sbjct: 201 NCMKPDNIHGGFNYY----RANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIE 256
Query: 262 LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
N + I+ GH EKP+ +K+
Sbjct: 257 FVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 82.0 bits (202), Expect = 5e-18
Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 56/284 (19%)
Query: 27 SVTDLQDGSVMHCWV---PKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY------- 76
V + +G +H W + +++ G + H
Sbjct: 10 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARR--------MDHFAGLAEYLSTN 61
Query: 77 -FNVYVPDLL-FFGDS---FTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGY 131
F+V+ D L G S + V ++ + + L+ S V Y
Sbjct: 62 GFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAY 121
Query: 132 SMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTF 191
+ + + +I GV +LRD + K + +L + +
Sbjct: 122 EVISDLELS---FLITAVGVV----NLRDTLEKALG-----FDYLSLPIDELPNDLDFEG 169
Query: 192 FKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHD 251
K V C + D + + + P + +D
Sbjct: 170 HKLGSEVFVRDCFEHHWDT------------------LDSTLDKVANTSVPLIAFTANND 211
Query: 252 QIFPLELGRRLKSHLG-DNAQLIVIKKAGHAF--NYEKPKEFYK 292
E + +H+ + +L + + H N + FY+
Sbjct: 212 DWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQ 255
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* Length = 264 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 6e-18
Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 21/260 (8%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFT-TRPERSESFQAE 104
+ VL+HG A W W + P + V DL G + + +E
Sbjct: 8 KQQKHFVLVHGGCLGA-WIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSE 66
Query: 105 CVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163
+M VM + +K+ L+G S+GG + EKI V + +
Sbjct: 67 PLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHS------ 120
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV--PSCLLSDYIDAMCTEYLEEKR 221
++ E P + Y + P +S++ P + E LE +
Sbjct: 121 -LTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAK 179
Query: 222 ELVRAIP-KDRKISNIDKITQ------PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIV 274
L R + ++ K + ++ D+ FP+E + +G ++
Sbjct: 180 MLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA-DKVKE 238
Query: 275 IKKAGHAFNYEKPKEFYKHL 294
IK+A H +P+E K L
Sbjct: 239 IKEADHMGMLSQPREVCKCL 258
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} Length = 291 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 7e-18
Identities = 57/277 (20%), Positives = 98/277 (35%), Gaps = 42/277 (15%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ------- 102
L+L+HG W I P + + F V DL +GDS +RP
Sbjct: 26 APLLLLHGYPQTH-VMWHKIAPLLANNFTVVATDLRGYGDS--SRPASVPHHINYSKRVM 82
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR- 161
A+ + VM ++ +VG G V + +A +++K+ + + D+
Sbjct: 83 AQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQE 142
Query: 162 ----------MFKVSDLEEASKILVPQSPGKLKELMRYTFFKR-PPLSLVPSCLLSDYID 210
+ + +L E L+ +P + +R K S L++YI
Sbjct: 143 FATAYYHWFFLIQPDNLPET---LIGANP---EYYLRKCLEKWGKDFSAFHPQALAEYIR 196
Query: 211 ---------AMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261
A C +Y R + ++ KI+ P L+LWGE I
Sbjct: 197 CFSQPAVIHATCEDY----RAAATIDLEHDELDMKQKISCPVLVLWGEKGIIGRKYDVLA 252
Query: 262 LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ + GH E P+E Y+ + +FL
Sbjct: 253 TWRERAIDVSGQSL-PCGHFLPEEAPEETYQAIYNFL 288
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} Length = 286 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 9e-18
Identities = 46/270 (17%), Positives = 95/270 (35%), Gaps = 30/270 (11%)
Query: 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ-- 102
+ P ++ IHG+ W + + + V PDL G S + E S+
Sbjct: 23 SPEHPVVLCIHGILEQG-LAWQEVALPLAAQGYRVVAPDLFGHGRS--SHLEMVTSYSSL 79
Query: 103 --AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE---QD 157
+ RV++ + L LVG S G + ++A+ +KI+++++ + EE +
Sbjct: 80 TFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKES 139
Query: 158 LRDRMFKVSDLEEASKILVPQSPGK--LKELMRYTFFKRPPLSLVPSCLL-------SDY 208
+++ D PQ P + P LS S +L +
Sbjct: 140 AVNQLTTCLD----YLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQG 195
Query: 209 IDAMCTEYLEEKRELVRAIPKDRKISNID----KITQPTLILWGEHDQIFPLELGRRLKS 264
+ + R ++ S I PT +++G+ ++ E ++ K
Sbjct: 196 GVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQK- 254
Query: 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHL 294
A+ + + GH + + +
Sbjct: 255 MTMTQAKRVFL-SGGHNLHIDAAAALASLI 283
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 78.8 bits (194), Expect = 4e-17
Identities = 50/252 (19%), Positives = 88/252 (34%), Gaps = 7/252 (2%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFG-DSFTTRPERSESFQAEC 105
VL+HG W W + P + V DL G D R+
Sbjct: 3 EGKHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLP 61
Query: 106 VMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
+M +ME+ S +K+ LVG S GG ++ +KI V + + + + +
Sbjct: 62 LMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQ 121
Query: 165 VSDLEEASKILVPQSPGKLKELMRYT--FFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
++ A L Q T FF L+ L S A+ + +
Sbjct: 122 YNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSL 181
Query: 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282
+ + K + ++ + + + D+ P E R ++G + I IK A H
Sbjct: 182 FMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHMA 240
Query: 283 NYEKPKEFYKHL 294
+P++ L
Sbjct: 241 MLCEPQKLCASL 252
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A Length = 297 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 4e-17
Identities = 42/274 (15%), Positives = 86/274 (31%), Gaps = 34/274 (12%)
Query: 48 SKPDLVLIHGLGANALW--QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESF---- 101
+V HG N W NI+PH+ + DL+ G S P + +
Sbjct: 27 KGDAIVFQHG---NPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGE 83
Query: 102 QAECVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160
Q + + + +A + + LV +G +G+ A Q +++++ + + V D
Sbjct: 84 QRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT--PMTWAD 141
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLE 218
V + + + + + L + ++ Y E
Sbjct: 142 WPPAVRGVFQGFRSPQGEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRR 201
Query: 219 EKRELVRAIPKDRKISNID-----------KITQPTLILWGEHDQIFPLELGRRLKSHLG 267
R +P D + + + + P L + E I + R
Sbjct: 202 PTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAIITGRI-RDYVRSW- 259
Query: 268 DNAQLIVIKKAGHAFNY---EKPKEFYKHLKSFL 298
N I + H + + P+E + F+
Sbjct: 260 PNQTEITV-PGVH---FVQEDSPEEIGAAIAQFV 289
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A Length = 318 | Back alignment and structure |
|---|
Score = 78.3 bits (193), Expect = 9e-17
Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 38/275 (13%)
Query: 48 SKPDLVLIHGLGANALW--QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSE-SF--Q 102
++ ++ +HG NA W +++PH+ +PDL+ G S +
Sbjct: 42 AENAVIFLHG---NATSSYLWRHVVPHIEPVARCIIPDLIGMGKS--GKSGNGSYRLLDH 96
Query: 103 AECVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR 161
+ + E ++ KK+ VG +G + + A + +++I+ +V S V + E
Sbjct: 97 YKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWP 156
Query: 162 MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD-----YIDAMCT-- 214
I + +S K ++ FF L L Y++
Sbjct: 157 DI-------EEDIALIKSEEGEKMVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKG 209
Query: 215 EYLEEKRELVRAIPKDRKISNID-----------KITQPTLILWGEHDQIFPLELGRRLK 263
E R IP + + + L+ E D F
Sbjct: 210 EVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPGFFSNAIVEGA 269
Query: 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
N + + + K H + P E K++KSF+
Sbjct: 270 KKF-PNTEFVKV-KGLHFLQEDAPDEMGKYIKSFV 302
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* Length = 267 | Back alignment and structure |
|---|
Score = 77.3 bits (190), Expect = 1e-16
Identities = 48/261 (18%), Positives = 82/261 (31%), Gaps = 26/261 (9%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQ--AE 104
K VL+H A W W I+ M NV DL G + + + +F
Sbjct: 11 VKKHFVLVHAAFHGA-WCWYKIVALMRSSGHNVTALDLGASGIN-PKQALQIPNFSDYLS 68
Query: 105 CVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163
+M M + +K+ LVG + GG F EKI V + D
Sbjct: 69 PLMEFMASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCT 128
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV--PSCLLSDYIDAMCTEYLEEKR 221
K + PP +L+ P L ++ E L
Sbjct: 129 KAGS---------AVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALAT 179
Query: 222 ELVRAIP--------KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273
LVR + K+ +S+ + + + + E + + ++
Sbjct: 180 ALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP-DEVK 238
Query: 274 VIKKAGHAFNYEKPKEFYKHL 294
I+ + H KP++ + L
Sbjct: 239 EIEGSDHVTMMSKPQQLFTTL 259
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-16
Identities = 36/255 (14%), Positives = 85/255 (33%), Gaps = 41/255 (16%)
Query: 53 VLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDS----FTTRPERSESFQAECVM 107
+L+HG N+ + + + + P G T P+
Sbjct: 20 LLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQ-DVMNGY 77
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
++ +K+++ GLS GG + IE +V C+
Sbjct: 78 EFLKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAP----------------- 118
Query: 168 LEEASKILVPQSPGKLKELMRY--TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
+ + + ++ Y + KR S + + L+ +EL+
Sbjct: 119 ------MYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIA 172
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGH-AFN 283
+ +D I PT ++ HD++ + + + + Q+ +++GH
Sbjct: 173 DVRDH-----LDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITL 227
Query: 284 YEKPKEFYKHLKSFL 298
++ + ++ + +FL
Sbjct: 228 DQEKDQLHEDIYAFL 242
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 77.6 bits (191), Expect = 4e-16
Identities = 49/325 (15%), Positives = 104/325 (32%), Gaps = 53/325 (16%)
Query: 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYV 81
++ +H S P + L HG + + W IP + + V
Sbjct: 236 DMSHGYVTVKPRVRLHFVEL----GSGPAVCLCHGFPESW-YSWRYQIPALAQAGYRVLA 290
Query: 82 PDLLFFGDSFTTRPERSESFQAECVMR----VMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137
D+ +G+S + P E + E + + ++ + + +G +GG + + MA +
Sbjct: 291 MDMKGYGES--SAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFY 348
Query: 138 KEKIEKVVICCS--GVCLEEQDLRDRM-----------FKVSDLEEA----------SKI 174
E++ V + + + F+ + EA +
Sbjct: 349 PERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSL 408
Query: 175 LVPQSPGKLKELM----RYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK---------- 220
L F P + + + I ++ +K
Sbjct: 409 FRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQF--KKSGFRGPLNWY 466
Query: 221 RELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280
R + R K KI P L++ E D + ++ + ++ + + + I+ GH
Sbjct: 467 RNMERNWKWACKSLG-RKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGH 524
Query: 281 AFNYEKPKEFYKHLKSFLLDSQPSP 305
+KP E + L +L +P
Sbjct: 525 WTQMDKPTEVNQILIKWLDSDARNP 549
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... Length = 257 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 6e-16
Identities = 46/250 (18%), Positives = 81/250 (32%), Gaps = 5/250 (2%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFT-TRPERSESFQAEC 105
+ VLIH + A W W + P + V DL G S +E
Sbjct: 2 AFAHFVLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEP 60
Query: 106 VMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
++ +EA +K+ LVG S GG A ++ EKI V S + E + K
Sbjct: 61 LLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDK 120
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
+ ++ K + K + + L L + +
Sbjct: 121 LMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQ 180
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284
+ K + + + +W + D+IF E + ++ ++ H
Sbjct: 181 NILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP-DKVYKVEGGDHKLQL 239
Query: 285 EKPKEFYKHL 294
K KE + L
Sbjct: 240 TKTKEIAEIL 249
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A Length = 302 | Back alignment and structure |
|---|
Score = 75.2 bits (185), Expect = 1e-15
Identities = 43/286 (15%), Positives = 90/286 (31%), Gaps = 34/286 (11%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
+ ++ HG ++ + W NI+PH + DL+ GDS P E +
Sbjct: 28 TGDPILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 86
Query: 108 RVMEA-----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE------- 155
++A ++ LV +G +G+ A + +E+++ + + E
Sbjct: 87 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ 146
Query: 156 -----QDLRDRMFKVSDLEE---ASKILVPQSPGKLKELMRYTF---FKRPPLSLVPSCL 204
Q R + + L++ ++L L E + F + P
Sbjct: 147 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRP--T 204
Query: 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264
LS + + R + P L + E + + R
Sbjct: 205 LSWPRQIPIAGTPADVVAIARDYAGWLS-----ESPIPKLFINAEPGALTTGRM-RDFCR 258
Query: 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLPPSN 310
+ Q + H + P E + +F+ +P+ +
Sbjct: 259 TWPN--QTEITVAGAHFIQEDSPDEIGAAIAAFVRRLRPAHHHHHH 302
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 2e-15
Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 11/122 (9%)
Query: 33 DGSVMHC--WVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMI-HYFNVYVPDLLFFG 88
G + +P + ++L+HG+ ++ WQ + + + DL G
Sbjct: 15 QGQALFFREALPGSGQARFS-VLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLG 73
Query: 89 DSFTTRPERSESF----QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKV 144
S + V++A + ++ S G ++
Sbjct: 74 HS--KEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGF 131
Query: 145 VI 146
V
Sbjct: 132 VP 133
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 Length = 210 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ P LI++G+ D + L N +++++K AGH +KP+E++ L FL
Sbjct: 150 VKTPALIVYGDQDPMGQTSF--EHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 8e-15
Identities = 44/282 (15%), Positives = 89/282 (31%), Gaps = 49/282 (17%)
Query: 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-----FNVY 80
+++T +DG + + + ++ HG AN +++ + +
Sbjct: 23 ATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNT---SLLREIANSLRDENIASV 79
Query: 81 VPDLLFFGDS---FTTRPERSESFQAECVMR-VMEAHSVKKLSLVGLSYGGFVGYSMAAQ 136
D GDS F +E A ++ V V+ + LVG + GG V +A
Sbjct: 80 RFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGL 139
Query: 137 FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196
+ + I+KVV+ L+ D + + + +P + +
Sbjct: 140 YPDLIKKVVLLAPAATLKG----DALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYL---- 191
Query: 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256
+ + +P + K P ++ G D +
Sbjct: 192 -------------------------RIAQQLPIYEVSAQFTK---PVCLIHGTDDTVVSP 223
Query: 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
++ N+ L +I+ A H F+ K FL
Sbjct: 224 NASKKYDQIYQ-NSTLHLIEGADHCFSDSYQKNAVNLTTDFL 264
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 5e-14
Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMI-HYFNVYVPDLLFFGDS 90
+G+ + T ++ + + L HG ++ W ++ + +NVY PD FG S
Sbjct: 12 NGTRVFQRKMVTDSN-RRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRS 70
Query: 91 FTTRPER------SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKV 144
E+ AE + ++A+ V + ++G S GG + Q+ + ++ +
Sbjct: 71 --ASSEKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGI 128
Query: 145 VICCSGVC 152
+
Sbjct: 129 IAVAPAWV 136
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} Length = 207 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 4e-08
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
I Q TL++WG D + P+ L + S + ++L +++ +GH EKP+EF + FL
Sbjct: 146 IRQKTLLVWGSKDHVVPIALSKEYASII-SGSRLEIVEGSGHPVYIEKPEEFVRITVDFL 204
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* Length = 328 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 2e-13
Identities = 45/300 (15%), Positives = 101/300 (33%), Gaps = 53/300 (17%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
P ++ IHG + W + + ++ + PDL +GD+ F +
Sbjct: 30 EGPTILFIHGFPELW-YSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHL 88
Query: 107 MRVMEA------HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS---GVCLEEQD 157
+ + A + +K+ +V +G + + + +K++ +V +
Sbjct: 89 VGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNV 148
Query: 158 LRDR---------MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDY 208
+ + + E P + + + T+ P L
Sbjct: 149 VEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKI-LTYRDPAPFYFPKGKGLEAI 207
Query: 209 IDA------MCTEYLEEKRELV---------------RAIPKDRKIS---NIDKITQPTL 244
DA +E EE RA+P + +++ ++ PT
Sbjct: 208 PDAPVALSSWLSE--EELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTK 265
Query: 245 ILWGEHDQIFPLELGRR------LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ GE D ++ + + K + +++V++ A H + E+P E KH+ F+
Sbjct: 266 FIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFI 325
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-13
Identities = 43/282 (15%), Positives = 84/282 (29%), Gaps = 61/282 (21%)
Query: 33 DGSVMHCW--VPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY--------FNVYVP 82
DG ++ + +PK + P ++IHG ++ H++
Sbjct: 9 DGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHS------EERHIVAVQETLNEIGVATLRA 62
Query: 83 DLLFF--GDS---FTTRPERSESFQAECVMR-VMEAHSVKKLSLVGLSYGGFVGYSMAAQ 136
D + G S F V+ + V + + G S GG AA
Sbjct: 63 D--MYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAM 120
Query: 137 FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196
++ I+ ++ + E + K P +L
Sbjct: 121 ERDIIKALIPLSPAAMIPEIARTGELLG-------LKFDPENIPDELDAWDGRKLKGN-- 171
Query: 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256
Y+ + + R +DK T+P LI+ G+ D+ P
Sbjct: 172 -------------------YVRVAQTI-------RVEDFVDKYTKPVLIVHGDQDEAVPY 205
Query: 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
E + +L+ I H ++ + + +K F+
Sbjct: 206 EASVAFSKQYKN-CKLVTIPGDTHCYD-HHLELVTEAVKEFM 245
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 68.9 bits (168), Expect = 3e-13
Identities = 32/256 (12%), Positives = 74/256 (28%), Gaps = 42/256 (16%)
Query: 33 DGSVMHCWVPKTRNDSK-PDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDS 90
+ + + T D P +++ GL + W H+ + + D+ G S
Sbjct: 176 EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYS 235
Query: 91 --FTTRPERSESFQAECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV 145
+ + S QA V+ + + ++ L+G +GG ++ +EKI K
Sbjct: 236 SKYPLTEDYSRLHQA--VLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKI-KAC 292
Query: 146 ICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLL 205
+ + ++ ++ P +++ K
Sbjct: 293 VILGAPIHDIFASPQKLQQM--------------PKMYLDVLASRLGKSV---------- 328
Query: 206 SDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265
+ ++ K + + K P L + E D + P + +
Sbjct: 329 --------VDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFF 380
Query: 266 LGDNAQLIVIKKAGHA 281
+ K
Sbjct: 381 STYGKAKKISSKTITQ 396
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} Length = 258 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 4e-13
Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 19/257 (7%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFG-DSFTTRPERSESFQAEC 105
K VL+H A W W + P + V +L G D + + ++
Sbjct: 3 RKHHFVLVHNAYHGA-WIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKP 61
Query: 106 VMRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
++ +++ +++ LVG S+GG A F KI+ +V + + + K
Sbjct: 62 LIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDK 121
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
++ S M + Y + +Y E + L
Sbjct: 122 YMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARL------YQNCPIEDY-ELAKMLH 174
Query: 225 RAIPKDRK-ISNIDKITQ------PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKK 277
R + +S +K ++ + + D+ P + R + + +++ I
Sbjct: 175 RQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFN-VSKVYEIDG 233
Query: 278 AGHAFNYEKPKEFYKHL 294
H KP++ + L
Sbjct: 234 GDHMVMLSKPQKLFDSL 250
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} Length = 367 | Back alignment and structure |
|---|
Score = 67.4 bits (164), Expect = 8e-13
Identities = 50/298 (16%), Positives = 100/298 (33%), Gaps = 41/298 (13%)
Query: 32 QDGSVMHCWV--PKTRNDSK-PDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFF 87
+ G + + PK R + P +V+ GA M F D +
Sbjct: 76 RYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYT 135
Query: 88 GDSFTTRPERSES--FQAECVMRVMEAHSV------KKLSLVGLSYGGFVGYSMAAQFKE 139
G+S +P S E ++ S+ +++ ++G+ G G ++ A +
Sbjct: 136 GES-GGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWG--GMALNAVAVD 192
Query: 140 KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSL 199
K K V+ + + + LE+ ++ L + K+ T +PP +
Sbjct: 193 KRVKAVVTSTMYDMTRV-MSKGYNDSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNE 251
Query: 200 VPSC---LLSDYIDAMCTEYLEEKREL----------VRAIPKDRKISNIDKI-TQPTLI 245
+ L DY D T R + + ++ I +I +P L+
Sbjct: 252 LKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPRPILL 311
Query: 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE---------FYKHL 294
+ GE + + +L+++ A H Y++ F +HL
Sbjct: 312 IHGERA--HSRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 67.0 bits (163), Expect = 1e-12
Identities = 34/255 (13%), Positives = 85/255 (33%), Gaps = 26/255 (10%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSF 91
+G ++ + + + ++ L+++ G + + + H +NV + DL G +
Sbjct: 143 EGELLPGYAIISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNP 202
Query: 92 TTRPERSESFQAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149
+ E + +++ + +K+++ G S GG+ + A + ++I K I +
Sbjct: 203 N-QGLHFEVDARAAISAILDWYQAPTEKIAIAGFSGGGYFT-AQAVEKDKRI-KAWIAST 259
Query: 150 GVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYI 209
+ + R + + + ++ K +
Sbjct: 260 PIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYA----------WQFG 309
Query: 210 DAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL--- 266
+ E E +I + +KI P+L L G + + + L +
Sbjct: 310 QVDFITSVNEVLEQ-------AQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQR 362
Query: 267 GDNAQLIVIKKAGHA 281
G + L A
Sbjct: 363 GIDVTLRKFSSESGA 377
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 66.4 bits (161), Expect = 2e-12
Identities = 46/267 (17%), Positives = 80/267 (29%), Gaps = 50/267 (18%)
Query: 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLF 86
++ G V P ++ I G+G L +++ H F
Sbjct: 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG--HGFATLALAYYN 193
Query: 87 FGDSFTTRPERSESFQAECV------MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK 140
F D P ++ E M + L+G+S G + SMA+ K
Sbjct: 194 FED----LPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNV 249
Query: 141 IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200
V I SG+ + Y PPL
Sbjct: 250 SATVSINGSGISG------------------------------NTAINYKHSSIPPLGYD 279
Query: 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE--- 257
+ + + + R + K+ + I+K P L++ G+ D + E
Sbjct: 280 LRRIKVAFSGLVDIVDI---RNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYA 336
Query: 258 --LGRRLKSHLGDNAQLIVIKKAGHAF 282
+ RL++H + Q+I GH
Sbjct: 337 QTVSERLQAHGKEKPQIICYPGTGHYI 363
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 63.4 bits (154), Expect = 7e-12
Identities = 32/254 (12%), Positives = 64/254 (25%), Gaps = 42/254 (16%)
Query: 53 VLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQA--ECVMRV 109
VL+H + + + + VYVP G +
Sbjct: 26 VLLHAYTGSP-NDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAA 84
Query: 110 ME--AHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
+ K+ + GLS GG + S + + L K ++
Sbjct: 85 VAHMTAKYAKVFVFGLSLGGIFAMKALETLPGIT-AGGVFSSPILPGKHHLVPGFLKYAE 143
Query: 168 LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI 227
+ + GK E + + L + +
Sbjct: 144 Y-------MNRLAGKSDESTQILAYLPGQL-----------------------AAIDQFA 173
Query: 228 PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG--DNAQLIVIKKAGH-AFNY 284
+++ + QPT I D++ L +L+ L A H
Sbjct: 174 TTVAA--DLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAKHVITVN 231
Query: 285 EKPKEFYKHLKSFL 298
+ + +F+
Sbjct: 232 SAHHALEEDVIAFM 245
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 64.4 bits (156), Expect = 9e-12
Identities = 42/266 (15%), Positives = 77/266 (28%), Gaps = 50/266 (18%)
Query: 30 DLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGD 89
++ G V P +V + G G L +++ F V + D
Sbjct: 155 PVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG--KGFAVMALAYYNYED 212
Query: 90 SFTTRPERSESFQAECV------MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEK 143
P+ E+ E + + L+G+S GG + SMA+ K I
Sbjct: 213 ----LPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITA 267
Query: 144 VVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203
V+ V LR + ++ + + + +
Sbjct: 268 AVVINGSVANVGGTLRYKG---------------ETLPPVGVNRNRIKVTKDGYADIVDV 312
Query: 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-----L 258
L S P + +++ L L G+ D + E
Sbjct: 313 LNSP-----------------LEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEA 355
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNY 284
+RL++H Q+I + GH
Sbjct: 356 CKRLQAHGRRKPQIICYPETGHYIEP 381
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 7e-11
Identities = 41/261 (15%), Positives = 76/261 (29%), Gaps = 65/261 (24%)
Query: 33 DGSVMHCWVPKTRNDSK-PDLVLIHGLGANALWQWTNIIPHMIHYF-----NVYVPDLLF 86
DG M +V P ++++ GL + + M + D
Sbjct: 135 DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESF-----QMENLVLDRGMATATFDGPG 189
Query: 87 FGDS---FTTRPERSESFQAECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEK 140
G+ + + A V+ ++ + ++G S GG +A + +
Sbjct: 190 QGEMFEYKRIAGDYEKYTSA--VVDLLTKLEAIRNDAIGVLGRSLGGNYAL-KSAACEPR 246
Query: 141 IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200
+ I G SDL+ KE +Y
Sbjct: 247 L-AACISWGGF--------------SDLDYW-----DLETPLTKESWKYVSKVDTLE--- 283
Query: 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260
E + + A+ + +I PT IL G HD++ PL
Sbjct: 284 -----------------EARLHVHAALETR---DVLSQIACPTYILHGVHDEV-PLSFVD 322
Query: 261 RLKSHL-GDNAQLIVIKKAGH 280
+ + ++ L+V K H
Sbjct: 323 TVLELVPAEHLNLVVEKDGDH 343
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 8e-11
Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 42/255 (16%)
Query: 53 VLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME 111
+L+HG + + V +P L G T E E + +E
Sbjct: 44 LLVHGFTGTP-HSMRPLAEAYAKAGYTVCLPRLKGHG----THYEDMERTTFHDWVASVE 98
Query: 112 AH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
+ + + GLS GG + +A + I +V + V D+ +
Sbjct: 99 EGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAV-----DIPAIAAGM 152
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
+ E + L ++ +++ P + + +L R
Sbjct: 153 TGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASL--------------------LQLAR 192
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGH-AFN 283
+ + + +D+I P LI + D + P + + +++ ++ + H A
Sbjct: 193 LMAQTKA--KLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATL 250
Query: 284 YEKPKEFYKHLKSFL 298
+ F
Sbjct: 251 DYDQPMIIERSLEFF 265
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 3e-10
Identities = 31/280 (11%), Positives = 73/280 (26%), Gaps = 70/280 (25%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-----FNVYVPDLLFF 87
+ + P ++ +HG G + DL
Sbjct: 14 GQDELSGTL--LTPTGMPGVLFVHGWGGSQHHSL-----VRAREAVGLGCICMTFDLRGH 66
Query: 88 GDS---FTTRPERSESFQAECVMRVMEAHSV---KKLSLVGLSYGGFVGYSMAAQFKEKI 141
+ + + + +++VGLSYGG++ + + +
Sbjct: 67 EGYASMRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTR--ERPV 124
Query: 142 EKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201
E + + + + + + + P L
Sbjct: 125 EWLALRSPALYKDA---------------------------HWDQPKVSLNADPDL---- 153
Query: 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261
+Y + ++ + L++ E+D I P + R
Sbjct: 154 ------------MDYRRRALAPGDNLA----LAACAQYKGDVLLVEAENDVIVPHPVMRN 197
Query: 262 LKSHLGDNAQ--LIVIKKAGHAFNYEK-PKEFYKHLKSFL 298
+ VI A HA + ++ +E+ + L +L
Sbjct: 198 YADAFTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWL 237
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 6e-10
Identities = 41/296 (13%), Positives = 84/296 (28%), Gaps = 71/296 (23%)
Query: 33 DGSVMHCWVPKTRNDSK-PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDL------- 84
G+ +H K + + K P L+ HG +N+ W + + ++ F V D+
Sbjct: 91 RGARIHAKYIKPKTEGKHPALIRFHGYSSNS-GDWNDKLNYVAAGFTVVAMDVRGQGGQS 149
Query: 85 LFFGDSFTTRP----------ERSESFQAECVMRVMEAHSV---------KKLSLVGLSY 125
G + + + + ++ ++G S
Sbjct: 150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQ 209
Query: 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185
GG + A + ++ KVV + D + + + ++ + E
Sbjct: 210 GGGLSL-ACAALEPRVRKVVSEYPFLS--------------DYKRVWDLDLAKNAYQ--E 252
Query: 186 LMRYTFFKRPPLSLVPSCL-LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTL 244
+ Y P YID + +I L
Sbjct: 253 ITDYFRLFDPRHERENEVFTKLGYIDVK---------------------NLAKRIKGDVL 291
Query: 245 ILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300
+ G DQ+ P +++ + V GH + F F+L+
Sbjct: 292 MCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEP----MRGFGDLAMQFMLE 343
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E Length = 320 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 6e-08
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
Query: 52 LVLIHGLGAN-----ALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAEC 105
++L+HGL L W I + VYV +L F R E
Sbjct: 11 IILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSD-DGPNGRGEQL-LAY 68
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV 145
V V+ A K++LVG S GG +AA + + V
Sbjct: 69 VKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVT 108
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A Length = 181 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 8e-08
Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 52 LVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110
+V++HG+G + + + I +++ ++ + F D T + V +V+
Sbjct: 6 VVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVL-SRFVQKVL 63
Query: 111 EAHSVKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVV 145
+ KK+ +V S GG K+ VV
Sbjct: 64 DETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 100
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 50.4 bits (120), Expect = 1e-07
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 223 LVRAIPKDRKISN--IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280
L+ P + ++ P LI+ G+ D++ P E + + + + +V+ A H
Sbjct: 131 LISVAPPVFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASH 190
Query: 281 AFNYEKPKEFYKHLKSFL 298
F+ + E + L L
Sbjct: 191 FFH-GRLIELRELLVRNL 207
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 51.5 bits (123), Expect = 1e-07
Identities = 22/121 (18%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSF 91
G+ +H + P +VL+HG + + W + IP + + V D +G S
Sbjct: 11 RGTRIHAVADSPPDQQGPLVVLLHGFPESW-YSWRHQIPALAGAGYRVVAIDQRGYGRS- 68
Query: 92 TTRPERSESFQAECVMR----VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVIC 147
++ ++++ + ++ V++++ ++ +VG +G V ++ A ++ VV
Sbjct: 69 -SKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGI 127
Query: 148 C 148
Sbjct: 128 S 128
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* Length = 356 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 5e-07
Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 12/134 (8%)
Query: 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY--------LEEKRELVRAIPKDR 231
P + E R P ++ P+ +D E+ L +
Sbjct: 225 PLCMAEGARLKDAFVYPETM-PAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLA 283
Query: 232 KISNIDKITQPTLILWGEHD--QIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE 289
+T P L + G++D I+ + R + + +I GH E P+E
Sbjct: 284 DQQG-KPLTPPALFIGGQYDVGTIWGAQAIERAHEVMPNYRGTHMIADVGHWIQQEAPEE 342
Query: 290 FYKHLKSFLLDSQP 303
+ L FL +P
Sbjct: 343 TNRLLLDFLGGLRP 356
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 42/292 (14%), Positives = 79/292 (27%), Gaps = 68/292 (23%)
Query: 33 DGSVMHCWVPKTRNDSK-PDLVLIHGLGANALWQWTNIIPH----MIH-YFNV------- 79
+ + W + P +V HG A+ + ++ V
Sbjct: 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSE 124
Query: 80 ---YVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV---------KKLSLVGLSYGG 127
P G ++ + + + A V ++ + G S GG
Sbjct: 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGG 184
Query: 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELM 187
+ AA + + V + + R V+ E+
Sbjct: 185 GLT-IAAAALSDIPKAAVADYPYLS----NFE-RAIDVAL------------EQPYLEIN 226
Query: 188 RYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILW 247
+ P + V + Y D M + D++ P L+
Sbjct: 227 SFFRRNGSPETEVQAMKTLSYFDIM---------------------NLADRVKVPVLMSI 265
Query: 248 GEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE----FYKHLK 295
G D++ P +HL +L V + GH + E F + LK
Sbjct: 266 GLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFKQILK 317
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 6e-07
Identities = 34/300 (11%), Positives = 73/300 (24%), Gaps = 76/300 (25%)
Query: 33 DGSVMHCWV--PKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS 90
G + W+ PK + P +V G + + + +V D G
Sbjct: 77 RGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGR-GFPHDWLFWPSMGYICFVMDTRGQGSG 135
Query: 91 FTTRPERSESFQA----------------------ECVMRVMEAHSV---------KKLS 119
+ + A +++
Sbjct: 136 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIV 195
Query: 120 LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179
+ G S GG + + +K + ++ +C R R ++ D
Sbjct: 196 IAGGSQGGGIAL-AVSALSKKAKALLCDVPFLC----HFR-RAVQLVD------------ 237
Query: 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI 239
E+ + K +++ + R + ++ +
Sbjct: 238 THPYAEITNF--LKTHR---------------------DKEEIVFRTLSYFDGVNFAARA 274
Query: 240 TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFL 298
P L G D I P ++ ++ + H + E K LK
Sbjct: 275 KIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGSFQAVEQVKFLKKLF 334
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A Length = 242 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-06
Identities = 36/278 (12%), Positives = 77/278 (27%), Gaps = 43/278 (15%)
Query: 37 MHCWVPKTRNDSKPDLVLIHGLGANALW--QWTNIIPHMIHYFNVYVPDLLFFGDSFTTR 94
M K L+ G + + + + G + T+
Sbjct: 1 MSQLFKSFDASEKTQLICFPFAGGYSASFRPLHAFLQGEC---EMLAAEPPGHGTNQTSA 57
Query: 95 PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK-IEKVVICCSGVCL 153
E E + + + + L G S GG + + +A + + + I + S
Sbjct: 58 IEDLEEL-TDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISA-IQ 115
Query: 154 EEQDLRDRMFKVSDLEEASKIL----VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYI 209
R ++ + D + I+ +P + KE+M SDY
Sbjct: 116 PPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVENKEVMS----------FFLPSFRSDY- 164
Query: 210 DAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN 269
++ +++ P + G D+ + +
Sbjct: 165 -RALEQFELYDLAQIQS---------------PVHVFNGLDDKKCIRDAEGW--KKWAKD 206
Query: 270 AQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLP 307
GH F + +E + + + L+ P P
Sbjct: 207 ITFHQF-DGGHMFLLSQTEEVAERIFAI-LNQHPIIQP 242
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 Length = 131 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 7e-06
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRV 109
P ++L+ + W +P + Y+ DL +G + P + A V
Sbjct: 23 PPVLLVAEEASR----WPEALPE---GYAFYLLDLPGYGRT--EGPRMAPEELAHFVAGF 73
Query: 110 MEAHSVKKLSLVGLSYGGFVGYSMAA 135
++ ++ G +G + A
Sbjct: 74 AVMMNLGAPWVLLRGLGLALGPHLEA 99
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 Length = 285 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 9e-06
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 14/108 (12%)
Query: 43 KTRNDSKPDLVLIHGLGANA----LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPER 97
+T+ P +VL HG+ + W I + VYV ++ T R
Sbjct: 5 QTKY---P-IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEV----SQLDTSEVR 56
Query: 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV 145
E + V ++ K++L+G S+GG +AA + I
Sbjct: 57 GEQL-LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASAT 103
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* Length = 316 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 1e-05
Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 37 MHCWVPKTRNDSKPDLVLIHGLGANA-LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTR 94
+ C + SKP ++L+ G G +N IP + F
Sbjct: 54 LTCQGASPSSVSKP-ILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFM---LND 109
Query: 95 PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKV 144
+ + + + + KL ++ S GG V F KV
Sbjct: 110 TQVNTEYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 159
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (107), Expect = 1e-05
Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 29/195 (14%)
Query: 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE------QDLRDRMFKVSDL 168
V++ + G S+G + + A E++ ++V+ ++ QD R F
Sbjct: 104 VEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWE 163
Query: 169 EEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--------EYLEEK 220
S + + + + P + L + L S + T + E+
Sbjct: 164 RVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDD 223
Query: 221 RELVRA-------------IPKDRKISNIDKITQ-PTLILWGEHDQIFPLELGRRLKSHL 266
L A D+ + N+ I P +I+ G +D ++ L
Sbjct: 224 FALAFARIENHYFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW 283
Query: 267 GDNAQLIVIKKAGHA 281
A+L +++ AGH+
Sbjct: 284 -PEAELHIVEGAGHS 297
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%)
Query: 206 SDYIDAMCTEYLEEKRELVRAI-PKDRKISNIDKITQPTLILWGEHDQIFPLE----LGR 260
S Y+D + + EE E R P ++ D++ P L+L G D + P E
Sbjct: 552 SRYLDFLIGSF-EEFPERYRDRAP----LTRADRVRVPFLLLQGLEDPVCPPEQCDRFLE 606
Query: 261 RLKSHLGDNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFL---LDSQPSPLPP 308
+ G + + GH F E + S + + +P
Sbjct: 607 AVAGC-GVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVEVAGVPL 657
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 51/297 (17%), Positives = 95/297 (31%), Gaps = 94/297 (31%)
Query: 33 DGSVMHCWVPKTRNDSK--PDLVLIHGLG--ANALWQWTNIIPHMIHY-----FNVYVPD 83
DGS + +V ++ P +VL+HG G A W F+V +P+
Sbjct: 342 DGSRVPTYVLESGRAPTPGPTVVLVHG-GPFAEDSDSWD----TFAASLAAAGFHVVMPN 396
Query: 84 LLF-----FGDSFTTRPER---SESFQ--AECVMRVMEAHSVKKLSLVGLSYGGF-VGYS 132
+ +G+ + + + + E+ +L ++G SYGG+ +
Sbjct: 397 --YRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCA 454
Query: 133 MAAQ---FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRY 189
+ + FK GV V D E
Sbjct: 455 LTMKPGLFK---------A-GVA---------GASVVDWE-------------------- 475
Query: 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI-PKDRKISNIDKITQPTLILWG 248
++ + RE++R+ P I+++D+I +P ++
Sbjct: 476 EMYELSD----------AAFRNFIEQLTGGSREIMRSRSP----INHVDRIKEPLALIHP 521
Query: 249 EHDQIFPLE----LGRRLKSHLGDNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFL 298
++ PL+ L L + G + +I AGHA N + FL
Sbjct: 522 QNASRTPLKPLLRLMGELLAR-GKTFEAHIIPDAGHAIN--TMEDAVKILLPAVFFL 575
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* Length = 267 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 3e-05
Identities = 50/282 (17%), Positives = 83/282 (29%), Gaps = 43/282 (15%)
Query: 40 WV--PKTRNDSKPDLVLIHGLGANALW--QWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP 95
W+ + D++ LV + G +A + + + V D P
Sbjct: 9 WLRRFERAPDARARLVCLPHAGGSASFFFPLAKALAPAVE---VLAVQYPGRQDRRHEPP 65
Query: 96 ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK--IEKVVICCSGVCL 153
S ++ V+ + L+L G S G +GY +A + E V + SG
Sbjct: 66 VDSIGGLTNRLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASG-RR 124
Query: 154 EEQDLRDRMFKVSDLEEASKILV-----PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDY 208
RD + + E L + EL+ +V + SDY
Sbjct: 125 APSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELLA----------MVLPAIRSDY 174
Query: 209 IDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD 268
Y E V P + G+HD + R + H
Sbjct: 175 --RAVETYRHEPGRRVDC---------------PVTVFTGDHDPRVSVGEARAWEEHTTG 217
Query: 269 NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLPPSN 310
A L V+ GH F ++ + L + N
Sbjct: 218 PADLRVL-PGGHFFLVDQAAPMIATMTEKLAGPALTGSTGGN 258
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} Length = 354 | Back alignment and structure |
|---|
Score = 44.2 bits (103), Expect = 3e-05
Identities = 43/282 (15%), Positives = 84/282 (29%), Gaps = 46/282 (16%)
Query: 40 WVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPE 96
+P T + + LV I G + + I + + FNVY D +
Sbjct: 55 ILPGTWSSGEQ-LVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR 113
Query: 97 R-----SESFQ------AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK-EKIEKV 144
+ + + E V + +++ L G S+GG + ++ + I+ +
Sbjct: 114 QLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGL 173
Query: 145 VICCSGVCLE--EQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202
++ G + EA I V S G + P +
Sbjct: 174 ILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDP 233
Query: 203 CL--LSDYI---------------------DAMCTEYLEEKRELVRAIPKDRKISNIDKI 239
+SD++ D + R + + + I
Sbjct: 234 KYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDLKFDYEGI 293
Query: 240 TQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281
PT+ E I + L N+++I++K GH
Sbjct: 294 LVPTIAFVSERFGIQIFD-----SKILPSNSEIILLKGYGHL 330
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 Length = 226 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 5e-05
Identities = 19/141 (13%), Positives = 42/141 (29%), Gaps = 17/141 (12%)
Query: 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD-----------LL 85
M K ++ SKP L+L+HG G N L + + +V
Sbjct: 26 MKHVFQKGKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFR 84
Query: 86 FFGDSFTTRPERSESFQA--ECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKI 141
+ + + E + + + + +G S G + S+ ++ +
Sbjct: 85 RLAEGIFDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENAL 144
Query: 142 EKVVICCSGVCLEEQDLRDRM 162
K + + +
Sbjct: 145 -KGAVLHHPMVPRRGMQLANL 164
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* Length = 317 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 5e-05
Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 5/105 (4%)
Query: 42 PKTRNDSKPDLVLIHGLGANA-LWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSE 99
+ + ++L+ G G +N IP + F + +
Sbjct: 24 GASPSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFM---LNDTQVNT 80
Query: 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKV 144
+ + + KL ++ S GG V F KV
Sbjct: 81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKV 125
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 52/309 (16%), Positives = 95/309 (30%), Gaps = 64/309 (20%)
Query: 33 DGSVMHC--WVPKTRNDSKPDLVLIHGLG---------ANALWQWTNIIPHMIHYFNVYV 81
DG + C W P K + + HG G A L V+
Sbjct: 26 DGQYLFCRYWAPT--GTPKALIFVSHGAGEHSGRYEELARMLMG---------LDLLVFA 74
Query: 82 PDLLFFGDSFTTRPERSESFQ------AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135
D + G S F + V + + + + L+G S GG + AA
Sbjct: 75 HDHVGHGQS-EGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAA 133
Query: 136 QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP 195
+ +V+ S + L + K+L + + +
Sbjct: 134 ERPGHFAGMVLI-SPLVLANPESATTF----------KVLAAKVLNSVLPNLSSGPIDSS 182
Query: 196 PLSLVPSCLLSDYIDA------MCTEYLEEK--RELVRAIPKDRKISNIDKITQPTLILW 247
LS +D +C L+ +L+ A+ R + K+T P L+L
Sbjct: 183 VLSRNK-----TEVDIYNSDPLICRAGLKVCFGIQLLNAV--SRVERALPKLTVPFLLLQ 235
Query: 248 GEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHA-FNYEKPK---EFYKHLKSFL---L 299
G D++ + L + L + + A H E P+ + + ++
Sbjct: 236 GSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK-ELPEVTNSVFHEINMWVSQRT 294
Query: 300 DSQPSPLPP 308
+ + PP
Sbjct: 295 ATAGTASPP 303
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 Length = 220 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 1e-04
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL-- 298
L++ G+ D+I + L L+ + H F+ K + L+ +
Sbjct: 156 AQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHFFH-RKLIDLRGALQHGVRR 214
Query: 299 -LDSQP 303
L + P
Sbjct: 215 WLPATP 220
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 1e-04
Identities = 15/134 (11%), Positives = 38/134 (28%), Gaps = 15/134 (11%)
Query: 42 PKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLF-----------FGDS 90
+ P VL+HG G + Q+ + ++ + P G+
Sbjct: 55 SRAGVAGAPLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEG 113
Query: 91 FTTRPERSESFQA--ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICC 148
+ + + + E + + +G S G + ++ + E +
Sbjct: 114 VYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELF-DAAVLM 172
Query: 149 SGVCLEEQDLRDRM 162
+ E +
Sbjct: 173 HPLIPFEPKISPAK 186
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 56/325 (17%), Positives = 98/325 (30%), Gaps = 82/325 (25%)
Query: 33 DGSVMHC--WVPKTRNDSKPD--LVLIHGLG---------ANALWQWTNIIPHMIHYFNV 79
DG + C W P P + + HG G A L V
Sbjct: 44 DGQYLFCRYWKP----TGTPKALIFVSHGAGEHSGRYEELARMLMG---------LDLLV 90
Query: 80 YVPDLLFFGDSFTTRPERSESFQ------AECVMRVMEAHSVKKLSLVGLSYGGFVGYSM 133
+ D + G S F + V + + + + L+G S GG +
Sbjct: 91 FAHDHVGHGQS-EGERMVVSDFHVFVRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILT 149
Query: 134 AAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFK 193
AA+ +V+ S + L + FKV + + +L
Sbjct: 150 AAERPGHFAGMVLI-SPLVLANPESATT-FKVLAAKVLNLVL------------------ 189
Query: 194 RPPLSLVPSCLLSDYI---DAMCTEYLEEK------------RELVRAIPKDRKISNIDK 238
P LSL P + S + Y + +L+ A+ R + K
Sbjct: 190 -PNLSLGP--IDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAV--SRVERALPK 244
Query: 239 ITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHA-FNYEKPK---EFYKH 293
+T P L+L G D++ + L + L + + A H E P+ +
Sbjct: 245 LTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHK-ELPEVTNSVFHE 303
Query: 294 LKSFL---LDSQPSPLPPSNQSANA 315
+ ++ + + PP
Sbjct: 304 INMWVSQRTATAGTASPPLEVDLQG 328
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 2e-04
Identities = 25/118 (21%), Positives = 36/118 (30%), Gaps = 16/118 (13%)
Query: 49 KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
K L+ +HGL + ++P F + D G+ P E V
Sbjct: 24 KALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 108 RV--------------MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151
RV E L L G S G FV + + A+ + SG
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGF 140
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 2e-04
Identities = 49/366 (13%), Positives = 87/366 (23%), Gaps = 149/366 (40%)
Query: 45 RNDSKPDLVLIHGLG-------ANALWQWTNIIPHM---IHYFNV---YVPDLLF----- 86
VLI G+ A + + M I + N+ P+ +
Sbjct: 145 LELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 87 ----FGDSFTTRPERS---------------------------------------ESFQA 103
++T+R + S +F
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 104 EC----------VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCL 153
C V + A + +SL S E + +
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMT----------LTPD-EVKSLLLKYLDC 313
Query: 154 EEQDLRDRMFKVSDLEEASKILVPQSPGKLKELM-----RYTFFKRPPLSLVPSCLLSDY 208
QDL E P+ + E + + +K L+
Sbjct: 314 RPQDLP---------REVLTTN-PRRLSIIAESIRDGLATWDNWKHVNCD-----KLTTI 358
Query: 209 IDAMCTEYLE--EKRELVR--AI-PKDRKISNIDKITQPTL-ILWGEHDQIFPLE----- 257
I+ LE E R++ ++ P I L ++W + + +
Sbjct: 359 IE-SSLNVLEPAEYRKMFDRLSVFPPSA------HIPTILLSLIWFDVIKSDVMVVVNKL 411
Query: 258 -------------------LGRRLKSHLGDNAQL---IV----IKKAGHAFNYEKPKE-- 289
+ LK L + L IV I K + + P
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 290 -FYKHL 294
FY H+
Sbjct: 472 YFYSHI 477
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 3e-04
Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 26/150 (17%)
Query: 27 SVTDLQDGSVMHCW--VPKTRNDSK--PDLVLIHGLGANALWQ------------WTNII 70
+ D + G + VPK N + P +V +HG G W
Sbjct: 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPR 207
Query: 71 PHMIHYFNVYVPD--------LLFFGDSFTTRPERSESFQAECVMRVMEAHSV--KKLSL 120
++H V P LF PE+ + + ++++ +++ ++ +
Sbjct: 208 YQVVHPCFVLAPQCPPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYI 267
Query: 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150
GLS GG+ ++ +F E + C G
Sbjct: 268 TGLSMGGYGTWTAIMEFPELFAAAIPICGG 297
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} Length = 275 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE---FYKHLKSFL 298
P I D P+E + +H+ + + K H F+ E Y+ + FL
Sbjct: 211 PVFIAHCNGDYDVPVEESEHIMNHVPH-STFERVNKNEHDFDRRPNDEAITIYRKVVDFL 269
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} Length = 319 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 4/123 (3%)
Query: 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMIHYFNVY-V 81
R D + V R P L+L+ ++ + + V +
Sbjct: 56 LRLKYGDPAGPEAVPEIVRLGRGQLGPQLILVCPTVMTTGPQVYSRLAEELDAGRRVSAL 115
Query: 82 PDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
F G P V + + +L G S GG V Y +A + + +
Sbjct: 116 VPPGFHGGQ--ALPATLTVLVRSLADVVQAEVADGEFALAGHSSGGVVAYEVARELEARG 173
Query: 142 EKV 144
Sbjct: 174 LAP 176
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} Length = 270 | Back alignment and structure |
|---|
Score = 39.7 bits (92), Expect = 6e-04
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Query: 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL-GDNA 270
E R L+ +R ++ + P IL G D P + +L HL D+
Sbjct: 178 YSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPADDV 237
Query: 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303
L +++ H + + + ++ +++ +P
Sbjct: 238 VLTLVRDGDHRLSRPQDIDRMRNAIRAMIEPRP 270
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* Length = 236 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 238 KITQPTLILWGEHDQIFPLELGRRLKSHL--GDNAQLIVIKKAGHAFN 283
++ P L G D P + + Q+ ++AGH+F
Sbjct: 158 EVKHPALFHMGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFA 205
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 Length = 302 | Back alignment and structure |
|---|
Score = 39.8 bits (92), Expect = 7e-04
Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 35 SVMHCWVPKTRNDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
++ P S ++++HGL ++ I V V DL +S
Sbjct: 22 PLLLLAAPAPHRASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLR 81
Query: 93 TRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137
E+ + F E V+ +M + + L+ S GG V ++ +
Sbjct: 82 PLWEQVQGF-REAVVPIMAKAP-QGVHLICYSQGGLVCRALLSVM 124
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} Length = 176 | Back alignment and structure |
|---|
Score = 38.8 bits (90), Expect = 7e-04
Identities = 12/95 (12%), Positives = 27/95 (28%), Gaps = 9/95 (9%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYF-----NVYVPDLLFFGDSFTTRPERSESFQ 102
S+ +L HG + + + PD +
Sbjct: 3 SRGHCILAHGFESG---PDALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGR 59
Query: 103 AECVMRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQ 136
+ ++ + A + L G S G ++ ++ Q
Sbjct: 60 LQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQ 94
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} Length = 209 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 7e-04
Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 20/137 (14%)
Query: 41 VPKTRNDSKPDLVLIHGLGANA---------LWQWTNII----PHMIHYFNVYVPDLLFF 87
V K L+L+H G + + I+ N Y
Sbjct: 8 VFKAGRKDLAPLLLLHSTGGDEHQLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLG 67
Query: 88 GDSFTTRPERSESFQAECVMRVMEAHSVK------KLSLVGLSYGGFVGYSMAAQFKEKI 141
G + S + + + + + K K+ +G S G V +M + K
Sbjct: 68 GFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINF 127
Query: 142 EKVVICCSGVCLEEQDL 158
+I G+ LE+ +
Sbjct: 128 -DKIIAFHGMQLEDFEQ 143
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 315 | |||
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 100.0 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 100.0 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 100.0 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 100.0 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 100.0 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 100.0 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 100.0 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 100.0 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 100.0 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 100.0 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 100.0 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 100.0 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 100.0 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 100.0 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 100.0 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 100.0 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 100.0 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 100.0 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 100.0 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 100.0 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 100.0 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 100.0 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 100.0 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 100.0 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 100.0 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 100.0 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 100.0 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 100.0 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 100.0 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 100.0 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 100.0 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 100.0 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 100.0 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 100.0 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 100.0 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 100.0 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 100.0 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 100.0 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 100.0 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 100.0 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 100.0 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 100.0 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 100.0 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 100.0 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 100.0 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 100.0 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 100.0 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 100.0 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 100.0 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 100.0 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 100.0 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 100.0 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 100.0 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 100.0 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 100.0 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 100.0 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 100.0 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 100.0 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 100.0 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 100.0 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 100.0 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 100.0 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 100.0 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 100.0 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 100.0 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 100.0 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 100.0 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 100.0 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 100.0 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 100.0 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 100.0 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.98 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.98 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.96 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.98 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.98 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.98 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.97 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.97 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.97 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.97 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.97 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.97 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.97 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.97 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.97 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.97 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.96 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.96 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.96 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.96 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.96 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.95 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.95 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.95 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.95 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.95 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.95 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.95 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.95 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.94 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.94 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.94 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.94 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.94 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.93 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.93 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.93 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.93 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.93 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.93 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.93 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.92 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.92 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.92 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.92 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.92 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.91 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.91 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.91 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.91 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.91 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.91 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.91 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.91 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.9 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.9 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.9 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.9 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.9 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.9 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.89 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.89 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.89 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.89 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.89 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.89 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.89 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.89 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.88 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.88 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.88 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.88 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.88 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.88 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.88 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.87 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.87 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.87 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.87 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.87 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.86 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.86 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.86 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.86 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.86 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.86 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.85 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.85 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.85 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.85 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.84 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.84 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.83 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.83 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.83 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.82 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.82 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.81 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.81 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.81 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.81 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.81 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.8 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.8 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.79 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.79 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.78 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.77 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.76 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.76 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.76 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.75 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.74 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.74 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.74 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.74 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.74 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.74 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.73 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.73 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.72 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.71 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.7 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.69 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.69 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.69 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.68 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.68 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.66 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.66 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.65 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.62 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.62 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.62 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.58 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.58 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.57 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.56 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.51 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.51 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.49 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.47 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.46 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.42 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.39 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.35 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.33 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.27 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.23 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 98.9 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.85 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 98.69 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 98.69 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 98.63 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 98.6 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.56 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 98.56 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 98.54 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.25 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.19 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.12 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.09 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 98.08 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.05 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.05 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 97.87 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 97.83 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 97.8 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 97.76 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 97.75 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 97.69 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 97.66 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 97.64 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.62 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 97.55 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 97.54 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.34 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.27 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.26 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.03 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 96.9 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.83 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 96.81 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.69 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.52 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.42 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 96.3 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.19 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.18 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.09 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 95.28 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 94.59 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 94.58 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 94.09 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 93.84 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 93.73 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 93.48 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 93.16 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 93.06 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 92.84 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.12 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 91.16 | |
| 4amm_A | 401 | DYNE8; transferase; 1.40A {Micromonospora chersina | 84.67 |
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=284.92 Aligned_cols=258 Identities=20% Similarity=0.273 Sum_probs=178.6
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
......||.+++|+... ++++|+|||+||++.+.. .|.++++.|+++|+|+++|+||||.|+.+...++...+++++
T Consensus 7 ~~~~~~~g~~l~y~~~G--~~~~p~lvl~hG~~~~~~-~w~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~a~dl 83 (266)
T 3om8_A 7 SFLATSDGASLAYRLDG--AAEKPLLALSNSIGTTLH-MWDAQLPALTRHFRVLRYDARGHGASSVPPGPYTLARLGEDV 83 (266)
T ss_dssp EEEECTTSCEEEEEEES--CTTSCEEEEECCTTCCGG-GGGGGHHHHHTTCEEEEECCTTSTTSCCCCSCCCHHHHHHHH
T ss_pred eEEeccCCcEEEEEecC--CCCCCEEEEeCCCccCHH-HHHHHHHHhhcCcEEEEEcCCCCCCCCCCCCCCCHHHHHHHH
Confidence 34555689999998863 345789999999999886 699999999999999999999999998665567777889999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
.++++++++++++|+||||||++|+.+|.++|++|+++|++++........ +...... ... ..........
T Consensus 84 ~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~ 155 (266)
T 3om8_A 84 LELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAA------VLQ--AEDMSETAAG 155 (266)
T ss_dssp HHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHH------HHH--CSSSHHHHHH
T ss_pred HHHHHHhCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHH------HHc--cccHHHHHHH
Confidence 999999999999999999999999999999999999999998765433211 1110000 000 0000000111
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~ 265 (315)
.+...+..... .........+.+.............+..+...+....+.+|++|||+|+|++|.++|++.++.+++.
T Consensus 156 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ 233 (266)
T 3om8_A 156 FLGNWFPPALL--ERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAAS 233 (266)
T ss_dssp HHHHHSCHHHH--HSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHhcChhhh--hcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHh
Confidence 11110000000 0000111111111111111111111112222234456789999999999999999999999999999
Q ss_pred cCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+ +++++++++ +||++++|+|++|++.|.+||.
T Consensus 234 i-p~a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 234 I-AGARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp S-TTCEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred C-CCCEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 9 799999997 8999999999999999999995
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=271.55 Aligned_cols=259 Identities=21% Similarity=0.315 Sum_probs=174.1
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
.++++ +|.+++|+...+.++.+|+|||+||++++.. .|.++++.|+++|+|+++|+||||.|..+...++...+++++
T Consensus 5 ~~~~~-~g~~l~y~~~g~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 82 (266)
T 2xua_A 5 PYAAV-NGTELHYRIDGERHGNAPWIVLSNSLGTDLS-MWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDV 82 (266)
T ss_dssp CEEEC-SSSEEEEEEESCSSSCCCEEEEECCTTCCGG-GGGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCCHHHHHHHH
T ss_pred CeEEE-CCEEEEEEEcCCccCCCCeEEEecCccCCHH-HHHHHHHHHhcCeEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 34555 6888999876321112689999999999886 699999999888999999999999998655556777789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH-HH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL-KE 185 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 185 (315)
.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.............. .. .... ..... ..
T Consensus 83 ~~~l~~l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~--~~---~~~~----~~~~~~~~ 153 (266)
T 2xua_A 83 LGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRA--VK---ARTE----GMHALADA 153 (266)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHH--HH---HHHH----CHHHHHHH
T ss_pred HHHHHhcCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHH--HH---HHhc----ChHHHHHH
Confidence 999999999999999999999999999999999999999998765432211000000 00 0000 00000 00
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~ 265 (315)
.+. .++..... .........+.+................+...+....+.++++|+|+|+|++|.++|++.++.+++.
T Consensus 154 ~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 154 VLP-RWFTADYM-EREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHH-HHSCHHHH-HHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHH-HHcCcccc-cCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 000 00000000 0000000111111100000011111111111123345778999999999999999999999999999
Q ss_pred cCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+ +++++++++ +||+++.|+|++|++.|.+||++
T Consensus 232 ~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 232 I-AGARYVELD-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp S-TTCEEEEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred C-CCCEEEEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence 8 689999999 99999999999999999999975
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=275.51 Aligned_cols=262 Identities=22% Similarity=0.284 Sum_probs=169.3
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
.+|..++|... +++++||||||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+...++...+++++.+++
T Consensus 14 ~~g~~l~y~~~----G~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~ll 88 (281)
T 3fob_A 14 QAPIEIYYEDH----GTGKPVVLIHGWPLSGR-SWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLL 88 (281)
T ss_dssp TEEEEEEEEEE----SSSEEEEEECCTTCCGG-GGTTTHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCceEEEEEEC----CCCCeEEEECCCCCcHH-HHHHHHHHHHhCCCEEEEeCCCCCCCCCCCccccCHHHHHHHHHHHH
Confidence 46778888875 23578999999999885 69999999965 59999999999999986655677777899999999
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccC--chhhhhhhhcccchhhhhhhccCCCchHHHHHH
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLE--EQDLRDRMFKVSDLEEASKILVPQSPGKLKELM 187 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (315)
+++++++++|+||||||++++.+++.+ |++|+++|++++..... ............................+..+.
T Consensus 89 ~~l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (281)
T 3fob_A 89 EQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFT 168 (281)
T ss_dssp HHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999888887776 89999999987643211 000000000000000000000000001111111
Q ss_pred HhhhccCCC-CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH-HHHHhh
Q 021229 188 RYTFFKRPP-LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG-RRLKSH 265 (315)
Q Consensus 188 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~-~~l~~~ 265 (315)
. .++.... ...........................+..+...+....+.+|++|||+|+|++|.++|.+.+ +.+.+.
T Consensus 169 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~ 247 (281)
T 3fob_A 169 K-GFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEA 247 (281)
T ss_dssp H-HHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHH
T ss_pred H-HhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHh
Confidence 1 1211110 001111111111111000011111111122212223446788999999999999999999865 677777
Q ss_pred cCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 248 ~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~~ 281 (281)
T 3fob_A 248 I-PNSKVALIKGGPHGLNATHAKEFNEALLLFLKD 281 (281)
T ss_dssp S-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHCC
T ss_pred C-CCceEEEeCCCCCchhhhhHHHHHHHHHHHhhC
Confidence 7 799999999999999999999999999999963
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=270.13 Aligned_cols=266 Identities=20% Similarity=0.222 Sum_probs=169.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
++++.||.+++|.... ++++|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+....+...+++++
T Consensus 2 ~~~~~~g~~l~y~~~G----~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~d~ 76 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDWG----SGKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDI 76 (271)
T ss_dssp EEECTTSCEEEEEEES----SSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEEcCCCCEEEEEccC----CCCeEEEECCCCCcHH-HHHHHHHHHHhCCceEEEecCCCCccCCCCCCCCCHHHHHHHH
Confidence 4566789999998762 4578999999999886 69999999875 5999999999999998665566777789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
.+++++++.++++|+||||||++++.+++++ |++|+++|++++........ ...........................
T Consensus 77 ~~~l~~l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
T 3ia2_A 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFIS 156 (271)
T ss_dssp HHHHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhHHHHHH
Confidence 9999999999999999999999877777766 89999999997643221100 000000000000000000000000001
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHH
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLK 263 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~ 263 (315)
.+ ...++...............................+..+...+....+.++++|+|+|+|++|.++|++. .+.+.
T Consensus 157 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~~~~~ 235 (271)
T 3ia2_A 157 DF-NAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAA 235 (271)
T ss_dssp HH-HHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHH
T ss_pred Hh-hHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHHHHHH
Confidence 11 11111110000011111111111100000111111111111122334567899999999999999999887 45556
Q ss_pred hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 264 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 236 ~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 236 ELI-KGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp HHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred HhC-CCceEEEEcCCCCcccccCHHHHHHHHHHHhhC
Confidence 666 789999999999999999999999999999963
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=270.60 Aligned_cols=268 Identities=18% Similarity=0.170 Sum_probs=172.0
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+++..||..++|.... +.++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++...+++++
T Consensus 3 ~~~~~~g~~l~y~~~g--~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~ 79 (276)
T 1zoi_A 3 YVTTKDGVQIFYKDWG--PRDAPVIHFHHGWPLSAD-DWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDGHDMDHYADDV 79 (276)
T ss_dssp EEECTTSCEEEEEEES--CTTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEECCCCcEEEEEecC--CCCCCeEEEECCCCcchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCHHHHHHHH
Confidence 4566789899988763 235678999999998885 699999999875 999999999999997654456777789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
.++++++++++++|+||||||.+|+.+|+++ |++|+++|++++........ .........................+.
T Consensus 80 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1zoi_A 80 AAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYR 159 (276)
T ss_dssp HHHHHHHTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHhCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999999988887 99999999998643221000 000000000000000000000000111
Q ss_pred HHHHhhhccCC-CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHH
Q 021229 185 ELMRYTFFKRP-PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRL 262 (315)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l 262 (315)
.+....++... ............+...............+..+...+....+.++++|+|+|+|++|.++|.+ ..+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 239 (276)
T 1zoi_A 160 DVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLS 239 (276)
T ss_dssp HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred HhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChHHHHHHH
Confidence 11110111100 00001111111111110000011111111111112223456789999999999999999987 56667
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.+.+ +++++++++++||++++|+|++|++.|.+||+
T Consensus 240 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 240 AKLL-PNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp HHHS-TTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HhhC-CCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 7777 68999999999999999999999999999996
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=269.72 Aligned_cols=261 Identities=17% Similarity=0.168 Sum_probs=174.0
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
.+|..++|+... ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+...++...+++++.+++
T Consensus 10 ~~g~~l~y~~~g----~g~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~a~dl~~~l 84 (277)
T 1brt_A 10 STSIDLYYEDHG----TGQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVL 84 (277)
T ss_dssp TEEEEEEEEEEC----SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCCcEEEEEEcC----CCCeEEEECCCCCcHH-HHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 467788888752 3568999999999885 699999999875 9999999999999986555567777899999999
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhhhh-hhceeEEeeCCCccCchhh--hhhhhcccchhhhhhhccCCCchHHHHHH
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFKE-KIEKVVICCSGVCLEEQDL--RDRMFKVSDLEEASKILVPQSPGKLKELM 187 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (315)
+++++++++|+||||||.+|+.+|.++|+ +|+++|++++......... .............................
T Consensus 85 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (277)
T 1brt_A 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFF 164 (277)
T ss_dssp HHHTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHhCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHH
Confidence 99999999999999999999999999999 9999999976432211000 00000000000000000000001111111
Q ss_pred HhhhccCC--CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH-HHHHh
Q 021229 188 RYTFFKRP--PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG-RRLKS 264 (315)
Q Consensus 188 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~-~~l~~ 264 (315)
. .++... ............+.+.............+..+ ..+....+.++++|+|+|+|++|.++|.+.+ +.+++
T Consensus 165 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 242 (277)
T 1brt_A 165 N-DFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHK 242 (277)
T ss_dssp H-HHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGT-TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHH
T ss_pred H-HHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHH-hccchhhcccCCCCeEEEecCCCccCChHHHHHHHHH
Confidence 1 111100 00001111222222211111111122222333 2233456788999999999999999999887 88998
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 243 ~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 277 (277)
T 1brt_A 243 AL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp HC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HC-CCCcEEEeCCCCcchhhhCHHHHHHHHHHHHhC
Confidence 88 689999999999999999999999999999963
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=269.35 Aligned_cols=268 Identities=19% Similarity=0.212 Sum_probs=172.2
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-----CC
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-----ER 97 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-----~~ 97 (315)
++...++.+ +|..++|.... ++++||||||++++.. .|.++++.|++.|+|+++|+||||.|+.+ . .+
T Consensus 8 ~~~~~~~~~-~g~~l~y~~~G----~g~~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~-~~~~~~~~ 80 (294)
T 1ehy_A 8 DFKHYEVQL-PDVKIHYVREG----AGPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPDLRGFGDSEKP-DLNDLSKY 80 (294)
T ss_dssp GSCEEEEEC-SSCEEEEEEEE----CSSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEECCTTSTTSCCC-CTTCGGGG
T ss_pred CcceeEEEE-CCEEEEEEEcC----CCCEEEEECCCCcchh-hHHHHHHHHhhcCEEEecCCCCCCCCCCC-ccccccCc
Confidence 344445555 68889998752 4679999999999885 69999999998999999999999999865 3 46
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh-----hhc--ccchhh
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR-----MFK--VSDLEE 170 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-----~~~--~~~~~~ 170 (315)
+...+++++.++++++++++++||||||||.+|+.+|.++|++|+++|+++++........... .+. ... ..
T Consensus 81 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (294)
T 1ehy_A 81 SLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQ-LD 159 (294)
T ss_dssp CHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTT-CH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecC-cc
Confidence 6777899999999999999999999999999999999999999999999986432111100000 000 000 00
Q ss_pred hhhhccCCCchHHHHHHHhhhccCC-CCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCcccc----ccccccCCCCeE
Q 021229 171 ASKILVPQSPGKLKELMRYTFFKRP-PLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDRK----ISNIDKITQPTL 244 (315)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~l~~i~~P~l 244 (315)
....................+.... .....+......+...... .........+..+..... ...+.++++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 239 (294)
T 1ehy_A 160 MAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 239 (294)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEE
T ss_pred hhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEE
Confidence 0000001111000111111111000 0001122212222221110 001011111111111110 113458999999
Q ss_pred EEEeCCCCCCc-hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 245 ILWGEHDQIFP-LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 245 vi~G~~D~~~~-~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+|+|++|.++| .+..+.+.+.+ +++++++++++||++++|+|++|++.|.+||+
T Consensus 240 vi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 294 (294)
T 1ehy_A 240 MIWGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 294 (294)
T ss_dssp EEEECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred EEEeCCCCCcchHHHHHHHHHHc-CCCceEEeCCCCCChhhhCHHHHHHHHHHHhC
Confidence 99999999998 36778888888 78999999999999999999999999999973
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=267.68 Aligned_cols=262 Identities=21% Similarity=0.332 Sum_probs=174.2
Q ss_pred eeeecCC-C---ceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhH-hhccccceEEeecCCCCCCCCCCCC-CC
Q 021229 27 SVTDLQD-G---SVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNII-PHMIHYFNVYVPDLLFFGDSFTTRP-ER 97 (315)
Q Consensus 27 ~~~~~~~-g---~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~-~~l~~~~~vi~~D~~G~G~S~~~~~-~~ 97 (315)
+++++++ | .+++|+... ++++||||||++ .+.. .|..++ +.|.+.|+|+++|+||||.|+.+.. .+
T Consensus 11 ~~~~~~~~g~~~~~l~y~~~G----~g~~vvllHG~~~~~~~~~-~w~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~ 85 (286)
T 2puj_A 11 KFVKINEKGFSDFNIHYNEAG----NGETVIMLHGGGPGAGGWS-NYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQ 85 (286)
T ss_dssp EEEEECSTTCSSEEEEEEEEC----CSSEEEEECCCSTTCCHHH-HHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSC
T ss_pred eEEEecCCCcceEEEEEEecC----CCCcEEEECCCCCCCCcHH-HHHHHHHHHHhccCEEEEECCCCCCCCCCCCCcCc
Confidence 3566642 6 889998752 357999999997 5554 699999 9998889999999999999976543 45
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
+...+++++.++++++++++++|+||||||++|+.+|.++|++|+++|++++....... ... . ...........+..
T Consensus 86 ~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~ 162 (286)
T 2puj_A 86 RGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSM-FAP-M-PMEGIKLLFKLYAE 162 (286)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCS-SSC-S-SCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCc-ccc-c-chhhHHHHHHHhhC
Confidence 66778999999999999999999999999999999999999999999999865421100 000 0 00000000000001
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhhccC--ccccccccccCCCCeEEEEeCCCCC
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVRAIP--KDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
.....+...+...+..... ............... .........+.... ..+....+.++++|+|+|+|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~ 239 (286)
T 2puj_A 163 PSYETLKQMLQVFLYDQSL---ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRF 239 (286)
T ss_dssp CCHHHHHHHHHHHCSCGGG---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSS
T ss_pred CcHHHHHHHHHHHhcCCcc---CCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCc
Confidence 1111222222222111100 111111111110100 00011111011000 1113346788999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|.+.++.+++.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 240 ~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 240 VPLDHGLKLLWNI-DDARLHVFSKCGAWAQWEHADEFNRLVIDFLRH 285 (286)
T ss_dssp SCTHHHHHHHHHS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999999999998 689999999999999999999999999999974
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=269.68 Aligned_cols=255 Identities=19% Similarity=0.237 Sum_probs=167.7
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcCC
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHSV 115 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~~ 115 (315)
++|....+..+++|+|||+||++++.. .|.++++.|+++|+|+++|+||||.|..+. ..++...+++++.++++++++
T Consensus 3 i~y~~~g~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~ 81 (268)
T 3v48_A 3 MKLSLSPPPYADAPVVVLISGLGGSGS-YWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGI 81 (268)
T ss_dssp SCCEECCCSSTTCCEEEEECCTTCCGG-GGHHHHHHHHTTSEEEECCCTTBTTBCCCCCTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEecCCCCCCCCEEEEeCCCCccHH-HHHHHHHHHhhcCeEEEECCCCCCCCCCCccccCCHHHHHHHHHHHHHHcCC
Confidence 345444333446789999999999886 699999999989999999999999997543 346777789999999999999
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP 195 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (315)
++++|+||||||.+|+.+|.++|++|+++|++++........ ...+... ...... ..............+..
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~- 153 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHT--RRCFQVR--ERLLYS---GGAQAWVEAQPLFLYPA- 153 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHH--HHHHHHH--HHHHHH---HHHHHHHHHHHHHHSCH-
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhh--hHHHHHH--HHHHhc---cchhhhhhhhhhhcCch-
Confidence 999999999999999999999999999999997654332111 0000000 000000 00000000000000000
Q ss_pred CCC-CCCcchhHHHHHHHHH-HHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEE
Q 021229 196 PLS-LVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273 (315)
Q Consensus 196 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~ 273 (315)
.+. ........+....... .........+..+...+....+.+|++|||+|+|++|.++|.+.++.+++.+ ++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~-p~~~~~ 232 (268)
T 3v48_A 154 DWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAAL-PDSQKM 232 (268)
T ss_dssp HHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHC-SSEEEE
T ss_pred hhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhC-CcCeEE
Confidence 000 0000000000000000 0000000111111112234567889999999999999999999999999999 789999
Q ss_pred EEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 274 VIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 274 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++++||++++|+|++|++.|.+||.+.
T Consensus 233 ~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 233 VMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp EESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred EeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999753
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=277.73 Aligned_cols=272 Identities=14% Similarity=0.175 Sum_probs=172.1
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
+.+.++++ +|..++|.... ++.+++||||||++++.. .|..+++.|++.|+||++|+||||.|+.+...++...++
T Consensus 7 ~~~~~~~~-~g~~l~y~~~G--~g~~~pvvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~a 82 (316)
T 3afi_E 7 IEIRRAPV-LGSSMAYRETG--AQDAPVVLFLHGNPTSSH-IWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFDHV 82 (316)
T ss_dssp ---CEEEE-TTEEEEEEEES--CTTSCEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHHH
T ss_pred ccceeEEe-CCEEEEEEEeC--CCCCCeEEEECCCCCchH-HHHHHHHHHhhCCEEEEECCCCCCCCCCCCCCCCHHHHH
Confidence 33445666 57889998763 222348999999999886 699999999988999999999999997654556777889
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-hhh-----hhhhcccchhhhhhhccC
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLR-----DRMFKVSDLEEASKILVP 177 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~ 177 (315)
+++.++++++++++++||||||||.+|+.+|.++|++|+++|++++....... ... ...............+..
T Consensus 83 ~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
T 3afi_E 83 RYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKFRT 162 (316)
T ss_dssp HHHHHHHHHTTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999863321000 000 000000000000000000
Q ss_pred CC-chHHH----HHHHhhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHHhhhccCcc-----------ccccccccCC
Q 021229 178 QS-PGKLK----ELMRYTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRELVRAIPKD-----------RKISNIDKIT 240 (315)
Q Consensus 178 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~l~~i~ 240 (315)
.. ..... .+....+... ............+..... .............+... .....+.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 241 (316)
T 3afi_E 163 PGEGEAMILEANAFVERVLPGG-IVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAASS 241 (316)
T ss_dssp TTHHHHHHTTSCHHHHTTTGGG-CSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHCC
T ss_pred CchhhHHHhccchHHHHhcccc-cCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhccC
Confidence 00 00000 0000000000 000001000111100000 00000011111111100 0112355789
Q ss_pred CCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 241 ~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||++++|+|++|++.|.+||++.
T Consensus 242 ~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 242 YPKLLFTGEPGALVSPEFAERFAASL-TRCALIRLGAGLHYLQEDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHS-SSEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCCCCccCHHHHHHHHHhC-CCCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999998 7899999999999999999999999999999753
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=265.18 Aligned_cols=269 Identities=17% Similarity=0.160 Sum_probs=170.9
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+++..+|..++|.... +.++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+...++...+++++
T Consensus 2 ~~~~~~g~~l~y~~~g--~~~~~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 78 (275)
T 1a88_A 2 TVTTSDGTNIFYKDWG--PRDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADV 78 (275)
T ss_dssp EEECTTSCEEEEEEES--CTTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEEccCCCEEEEEEcC--CCCCceEEEECCCCCchh-hHHHHHHHHHHCCceEEEEcCCcCCCCCCCCCCCCHHHHHHHH
Confidence 3556689899988763 335678999999998885 699999999875 999999999999997654556677789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
.++++++++++++|+||||||.+++.+++++ |++|+++|++++........ .........................+.
T Consensus 79 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T 1a88_A 79 AALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYI 158 (275)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHcCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999999999999999988887 99999999997643221100 000000000000000000000000111
Q ss_pred HHHHhhhccCC-CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHH
Q 021229 185 ELMRYTFFKRP-PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRL 262 (315)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l 262 (315)
.+....++... ............+...............+..+...+....+.++++|+|+|+|++|.++|.+ ..+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 238 (275)
T 1a88_A 159 DVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKS 238 (275)
T ss_dssp HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred hhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcHHHHHHH
Confidence 11110111100 00001111111111110000000111111111111123346789999999999999999987 45666
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 239 ~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (275)
T 1a88_A 239 AELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HhhC-CCcEEEEcCCCCccHHHhCHHHHHHHHHHHhhC
Confidence 6777 689999999999999999999999999999963
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=271.19 Aligned_cols=253 Identities=17% Similarity=0.168 Sum_probs=169.6
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCC-CCC--CCCchhHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT-TRP--ERSESFQAECVMR 108 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~-~~~--~~~~~~~a~~~~~ 108 (315)
.+|..++|+... ++++++||||||++++....|.++++.|+++|+|+++|+||||.|+. +.. .++...+++++.+
T Consensus 10 ~~g~~l~~~~~G--~~~~~~vvllHG~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~a~dl~~ 87 (286)
T 2yys_A 10 VGEAELYVEDVG--PVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDALVEDTLL 87 (286)
T ss_dssp CSSCEEEEEEES--CTTSCEEEEECCTTTCCSHHHHHHHGGGCTTSEEEEECCTTSTTSCCCCSCGGGCCHHHHHHHHHH
T ss_pred ECCEEEEEEeec--CCCCCEEEEECCCCCcchhHHHHHHHHhcCCCEEEEECCCCCCCCCCCccCcccCcHHHHHHHHHH
Confidence 368889998763 23568999999999887415999999998889999999999999976 433 5677778999999
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc------cc-hhhhhhhccCCCch
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV------SD-LEEASKILVPQSPG 181 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~ 181 (315)
+++++++++++|+||||||.+|+.+|.++|+ |+++|++++...... .....+.. .. .......+......
T Consensus 88 ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2yys_A 88 LAEALGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPW--LAARLAEAAGLAPLPDPEENLKEALKREEPK 164 (286)
T ss_dssp HHHHTTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHH--HHHHHHHHTTCCCCSCHHHHHHHHHHHSCHH
T ss_pred HHHHhCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHH--HHHHHHHHhccccchhHHHHHHHHhccCChH
Confidence 9999999999999999999999999999999 999999987542111 00000000 00 00000000000000
Q ss_pred HHHHHHHhhhccCCCCCCCCcc-hhHHHHHHHHHH----HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch
Q 021229 182 KLKELMRYTFFKRPPLSLVPSC-LLSDYIDAMCTE----YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
...+.+. +. .+.. ...+........ ...... ....+...+....+.++++|+|+|+|++|.++|.
T Consensus 165 ~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 234 (286)
T 2yys_A 165 ALFDRLM--FP-------TPRGRMAYEWLAEGAGILGSDAPGLAF-LRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYP 234 (286)
T ss_dssp HHHHHHH--CS-------SHHHHHHHHHHHHHTTCCCCSHHHHHH-HHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTT
T ss_pred HHHHhhh--cc-------CCccccChHHHHHHHhhccccccchhh-cccccccCChhhhhhhcCCCEEEEEeCCCCcCCH
Confidence 0000000 00 0000 000010000000 000000 1111112223445788999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+ ++.+++ + +++++++++++||+++.|+|++|++.|.+||.+..
T Consensus 235 ~-~~~~~~-~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 277 (286)
T 2yys_A 235 Y-AEEVAS-R-LRAPIRVLPEAGHYLWIDAPEAFEEAFKEALAALV 277 (286)
T ss_dssp T-HHHHHH-H-HTCCEEEETTCCSSHHHHCHHHHHHHHHHHHHTTC
T ss_pred h-HHHHHh-C-CCCCEEEeCCCCCCcChhhHHHHHHHHHHHHHhhh
Confidence 9 999999 8 68999999999999999999999999999998643
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=264.99 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=170.6
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChh--hhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANAL--WQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQA 103 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~--~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a 103 (315)
+++.+ +|.+++|... + ++++||||||++.+.. ..|..+++.|+++|+|+++|+||||.|+.+. ..++...++
T Consensus 8 ~~~~~-~g~~l~y~~~--G--~g~~vvllHG~~~~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~a 82 (282)
T 1iup_A 8 KSILA-AGVLTNYHDV--G--EGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWV 82 (282)
T ss_dssp EEEEE-TTEEEEEEEE--C--CSSEEEEECCCCTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHH
T ss_pred ceEEE-CCEEEEEEec--C--CCCeEEEECCCCCCccHHHHHHHHHHhhccCCEEEEECCCCCCCCCCCCCCCCCHHHHH
Confidence 34555 6888999875 2 3578999999875432 2588999999888999999999999997653 245677789
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hhhhhhhhcccchhhhhhhccCCCchH
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
+++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++...... .......... ......
T Consensus 83 ~dl~~~l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 151 (282)
T 1iup_A 83 DHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY-----------TPSIEN 151 (282)
T ss_dssp HHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC-----------CSCHHH
T ss_pred HHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC-----------CCcHHH
Confidence 9999999999999999999999999999999999999999999976543211 0000000000 001111
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhh--------ccCccccccccccCCCCeEEEEeCCCCC
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVR--------AIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
+..++......... ............... ........+.. .+.. ....+.++++|+|+|+|++|.+
T Consensus 152 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~i~~P~lii~G~~D~~ 226 (282)
T 1iup_A 152 MRNLLDIFAYDRSL---VTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALAS--SDEDIKTLPNETLIIHGREDQV 226 (282)
T ss_dssp HHHHHHHHCSSGGG---CCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCC--CHHHHTTCCSCEEEEEETTCSS
T ss_pred HHHHHHHhhcCccc---CCHHHHHHHHhhccChHHHHHHHHHHhcccccccccccc--chhhhhhcCCCEEEEecCCCCC
Confidence 22222211111000 011111111000000 00000001000 0000 1145678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|.+.++.+++.+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 227 ~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 227 VPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 272 (282)
T ss_dssp SCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhC-CCCeEEEECCCCCCccccCHHHHHHHHHHHHhc
Confidence 9999999999998 689999999999999999999999999999986
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=267.16 Aligned_cols=262 Identities=22% Similarity=0.327 Sum_probs=172.9
Q ss_pred eeecCCC-ceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-CCCchhH
Q 021229 28 VTDLQDG-SVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-ERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g-~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~ 102 (315)
++++ +| ..++|.... ++.+|+||||||++ .+.. .|.++++.|.+.|+|+++|+||||.|+.+.. .++...+
T Consensus 17 ~~~~-~g~~~l~y~~~G--~g~~~~vvllHG~~pg~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 92 (291)
T 2wue_A 17 EVDV-DGPLKLHYHEAG--VGNDQTVVLLHGGGPGAASWT-NFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYA 92 (291)
T ss_dssp EEES-SSEEEEEEEEEC--TTCSSEEEEECCCCTTCCHHH-HTTTTHHHHTTTSEEEEECCTTSTTSCCCSCCSSHHHHH
T ss_pred EEEe-CCcEEEEEEecC--CCCCCcEEEECCCCCccchHH-HHHHHHHHHHhcCEEEEECCCCCCCCCCCCCCCcCHHHH
Confidence 4555 67 889998763 33335899999997 5554 6999999998889999999999999976543 4566778
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... ..... ..........+.......
T Consensus 93 a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 169 (291)
T 2wue_A 93 AMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINL-FAPDP--TEGVKRLSKFSVAPTREN 169 (291)
T ss_dssp HHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCS-SSCSS--CHHHHHHHHHHHSCCHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccc-ccccc--chhhHHHHHHhccCCHHH
Confidence 999999999999999999999999999999999999999999999865421100 00000 000000000000011112
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCc-----cccccccccCCCCeEEEEeCCCCCCch
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPK-----DRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
+...+...+... . ................ ............... ......+.++++|+|+|+|++|.++|.
T Consensus 170 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 246 (291)
T 2wue_A 170 LEAFLRVMVYDK-N--LITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPL 246 (291)
T ss_dssp HHHHHHTSCSSG-G--GSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCG
T ss_pred HHHHHHHhccCc-c--cCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCH
Confidence 222222111110 0 0111111111111100 000000000000110 111256788999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.++.+++.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 247 ~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 247 DGALVALKTI-PRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GGGHHHHHHS-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHC-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999988 689999999999999999999999999999975
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=263.65 Aligned_cols=265 Identities=17% Similarity=0.214 Sum_probs=169.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+++..+|..++|.... ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+...++...+++++
T Consensus 2 ~~~~~~g~~l~y~~~g----~g~~vvllHG~~~~~~-~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (274)
T 1a8q_A 2 ICTTRDGVEIFYKDWG----QGRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76 (274)
T ss_dssp EEECTTSCEEEEEEEC----SSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEEccCCCEEEEEecC----CCceEEEECCCcchHH-HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCCCCcHHHHHHHH
Confidence 3566788899988752 4578999999998886 699999999875 999999999999997654456677789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCc--hhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEE--QDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
.+++++++.++++|+||||||.+++.++.++ |++|+++|++++...... ....... ....................
T Consensus 77 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 155 (274)
T 1a8q_A 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGV-PDEVFDALKNGVLTERSQFW 155 (274)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSB-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccc-hHHHHHHHHHHhhccHHHHH
Confidence 9999999999999999999999999988887 999999999976432110 0000000 00000000000000000001
Q ss_pred HHHHHhhhccCC-CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHH
Q 021229 184 KELMRYTFFKRP-PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRR 261 (315)
Q Consensus 184 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~ 261 (315)
..+.. .++... ............+...............+..+...+....+.++++|+|+|+|++|.++|++ ..+.
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 234 (274)
T 1a8q_A 156 KDTAE-GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRK 234 (274)
T ss_dssp HHHHH-HHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHH
T ss_pred HHhcc-cccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHH
Confidence 11111 111110 00001111111111110000001111111111111223456789999999999999999988 4566
Q ss_pred HHhhcCCCcEEEEEcCCCCccccC--ChHHHHHHHHHHHhc
Q 021229 262 LKSHLGDNAQLIVIKKAGHAFNYE--KPKEFYKHLKSFLLD 300 (315)
Q Consensus 262 l~~~~~~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 300 (315)
+.+.+ +++++++++++||+++.| +|++|++.|.+||++
T Consensus 235 ~~~~~-~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~~ 274 (274)
T 1a8q_A 235 SAQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHHS-TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHhhC-CCceEEEECCCCCceecccCCHHHHHHHHHHHhcC
Confidence 66777 689999999999999999 999999999999963
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=263.16 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=169.2
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVM 107 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~ 107 (315)
++..+|.+++|.... ++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+...++...+++++.
T Consensus 3 ~~~~~g~~l~y~~~g----~~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~ 77 (273)
T 1a8s_A 3 FTTRDGTQIYYKDWG----SGQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDLA 77 (273)
T ss_dssp EECTTSCEEEEEEES----CSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHH
T ss_pred EecCCCcEEEEEEcC----CCCEEEEECCCCCcHH-HHhhHHhhHhhCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 456688889987752 4578999999998886 699999999875 9999999999999976544566777899999
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCch--hhhhhhhcccchhhhhhhccCCCchHHH
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQ--DLRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
+++++++.++++|+||||||.+|+.+++++ |++|+++|++++....... ..... ....................+.
T Consensus 78 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 156 (273)
T 1a8s_A 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGG-LPMEVFDGIRQASLADRSQLYK 156 (273)
T ss_dssp HHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTS-BCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCcccccc-CcHHHHHHHHHHhHhhHHHHHH
Confidence 999999999999999999999999988887 9999999999764322100 00000 0000000000000000000011
Q ss_pred HHHHhhhccCC-CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHH
Q 021229 185 ELMRYTFFKRP-PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRL 262 (315)
Q Consensus 185 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l 262 (315)
.+....++... ............+...............+..+...+....+.++++|+|+|+|++|.++|.+ ..+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 236 (273)
T 1a8s_A 157 DLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIAS 236 (273)
T ss_dssp HHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred HhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHH
Confidence 11110111100 00001111111111110000001111111111111223456789999999999999999987 55666
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 237 ~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
T 1a8s_A 237 AALV-KGSTLKIYSGAPHGLTDTHKDQLNADLLAFIKG 273 (273)
T ss_dssp HHHS-TTCEEEEETTCCSCHHHHTHHHHHHHHHHHHHC
T ss_pred HHhC-CCcEEEEeCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 7777 689999999999999999999999999999963
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-36 Score=252.29 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=167.7
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCC---ch
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERS---ES 100 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~---~~ 100 (315)
...++.+ +|..++|.... + .+++|||+||++++....|.++++.|.+. |+|+++|+||||.|..+...++ ..
T Consensus 3 ~~~~~~~-~g~~l~~~~~g--~-~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (254)
T 2ocg_A 3 TSAKVAV-NGVQLHYQQTG--E-GDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFE 78 (254)
T ss_dssp EEEEEEE-TTEEEEEEEEE--C-CSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCCCCCTTHHH
T ss_pred ceeEEEE-CCEEEEEEEec--C-CCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCCCCChHHHH
Confidence 3445666 67888887753 2 24589999999887333588999999887 9999999999999975433344 34
Q ss_pred hHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc
Q 021229 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
..++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++......... ........ .. ...
T Consensus 79 ~~~~~~~~~l~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~-------~~-~~~ 149 (254)
T 2ocg_A 79 RDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDS-MIYEGIRD-------VS-KWS 149 (254)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHH-HHHHTTSC-------GG-GSC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhH-HHHHHHHH-------HH-HHH
Confidence 4578888999999999999999999999999999999999999999876543321110 00000000 00 000
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHH
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
......+...+. ..............................+.++++|+|+|+|++|.++|.+.++
T Consensus 150 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 216 (254)
T 2ocg_A 150 ERTRKPLEALYG-------------YDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHAD 216 (254)
T ss_dssp HHHHHHHHHHHC-------------HHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHhHHHHHHHhc-------------chhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHH
Confidence 111111110000 0000000000111111111100111123457789999999999999999999999
Q ss_pred HHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 261 RLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 261 ~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.+++.+ +++++++++++||+++.|+|+++++.|.+||+
T Consensus 217 ~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 254 (254)
T 2ocg_A 217 FIHKHV-KGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ 254 (254)
T ss_dssp HHHHHS-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred HHHHhC-CCCEEEEcCCCCCchhhhCHHHHHHHHHHHhC
Confidence 999988 68999999999999999999999999999984
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=274.05 Aligned_cols=262 Identities=13% Similarity=0.151 Sum_probs=168.6
Q ss_pred eeeeeecCC---CceEEEEEecCCCCC-CCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCC--CCC
Q 021229 25 RSSVTDLQD---GSVMHCWVPKTRNDS-KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTR--PER 97 (315)
Q Consensus 25 ~~~~~~~~~---g~~~~~~~~~~~~~~-~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~--~~~ 97 (315)
...++++++ |.+++|.... +.+ +++||||||++.+.. .|.++++.|++. |+||++|+||||.|+.+. ..+
T Consensus 21 ~~~~~~~~g~~~g~~l~y~~~G--~~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~y 97 (310)
T 1b6g_A 21 SPNYLDDLPGYPGLRAHYLDEG--NSDAEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDY 97 (310)
T ss_dssp CCEEEESCTTCTTCEEEEEEEE--CTTCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred CceEEEecCCccceEEEEEEeC--CCCCCCEEEEECCCCCchh-hHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCCcCCc
Confidence 445677743 2889998753 224 679999999999885 699999999987 999999999999997543 246
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh---hhh--hhhc--ccchhh
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD---LRD--RMFK--VSDLEE 170 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~---~~~--~~~~--~~~~~~ 170 (315)
+...+++++.++++++++++++||||||||.||+.+|.++|++|+++|+++++....... ... .... ......
T Consensus 98 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (310)
T 1b6g_A 98 TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKY 177 (310)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHH
Confidence 777789999999999999999999999999999999999999999999998754210100 000 0000 000000
Q ss_pred hhhhccCCCch-HHH--------HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccc-cCC
Q 021229 171 ASKILVPQSPG-KLK--------ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNID-KIT 240 (315)
Q Consensus 171 ~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~i~ 240 (315)
.... .+.... ... +.....+...... .........+............ .. .......+. +|+
T Consensus 178 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~l~~~i~ 249 (310)
T 1b6g_A 178 DLVT-PSDLRLDQFMKRWAPTLTEAEASAYAAPFPD-TSYQAGVRKFPKMVAQRDQAXI-DI-----STEAISFWQNDWN 249 (310)
T ss_dssp HHHS-CSSCCHHHHHHHHSTTCCHHHHHHHHTTCSS-GGGCHHHHHHHHHHHSCCHHHH-HH-----HHHHHHHHHHTCC
T ss_pred Hhcc-CchhhhhhHHhhcCCCCCHHHHHHHhcccCC-ccchHHHHHHHHHhcccccchh-hh-----hhhHhhhhhcccc
Confidence 0000 000000 000 0000000000000 0000000000000000000000 00 001123466 899
Q ss_pred CCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEE--cCCCCccccCChHHHHHHHHHHHhc
Q 021229 241 QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI--KKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 241 ~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i--~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|||+|+|++|.++| +.++.+++.+ ++++++++ ++|||++++ +|++|++.|.+||++
T Consensus 250 ~P~Lvi~G~~D~~~~-~~~~~~~~~i-p~~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 250 GQTFMAIGMKDKLLG-PDVMYPMKAL-INGCPEPLEIADAGHFVQE-FGEQVAREALKHFAE 308 (310)
T ss_dssp SEEEEEEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSCGGG-GHHHHHHHHHHHHHH
T ss_pred CceEEEeccCcchhh-hHHHHHHHhc-ccccceeeecCCcccchhh-ChHHHHHHHHHHHhc
Confidence 999999999999999 8889999988 68888877 999999999 999999999999975
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=260.61 Aligned_cols=254 Identities=13% Similarity=0.073 Sum_probs=163.4
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~ 107 (315)
.+++ +|..++|.....+ .++|+||||||++++.. .|..+++.|+++|+||++|+||||.|+.+...++...+++++.
T Consensus 8 ~~~~-~g~~l~y~~~~~G-~~~p~vvllHG~~~~~~-~w~~~~~~L~~~~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~ 84 (276)
T 2wj6_A 8 ETLV-FDNKLSYIDNQRD-TDGPAILLLPGWCHDHR-VYKYLIQELDADFRVIVPNWRGHGLSPSEVPDFGYQEQVKDAL 84 (276)
T ss_dssp EEEE-TTEEEEEEECCCC-CSSCEEEEECCTTCCGG-GGHHHHHHHTTTSCEEEECCTTCSSSCCCCCCCCHHHHHHHHH
T ss_pred EEee-CCeEEEEEEecCC-CCCCeEEEECCCCCcHH-HHHHHHHHHhcCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 3444 6888999874212 23578999999999886 6999999999899999999999999986555677778899999
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc-hHHHH
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP-GKLKE 185 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (315)
++++++++++++||||||||.||+.+|.++ |++|+++|++++................. .+... .....
T Consensus 85 ~ll~~l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 155 (276)
T 2wj6_A 85 EILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLK---------DPERWREGTHG 155 (276)
T ss_dssp HHHHHHTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHH---------CTTTHHHHHHH
T ss_pred HHHHHhCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhcc---------CcchHHHHHHH
Confidence 999999999999999999999999999999 99999999997643221111110000000 00000 00000
Q ss_pred HHHhhhccCCCC-------CCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc--h
Q 021229 186 LMRYTFFKRPPL-------SLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP--L 256 (315)
Q Consensus 186 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--~ 256 (315)
.+...+...... ..........+... .......+... ......+.++++|+++++|..|...+ .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~l~~i~~P~lv~~~~~~~~~~~~~ 228 (276)
T 2wj6_A 156 LFDVWLDGHDEKRVRHHLLEEMADYGYDCWGRS-----GRVIEDAYGRN--GSPMQMMANLTKTRPIRHIFSQPTEPEYE 228 (276)
T ss_dssp HHHHHHTTBCCHHHHHHHHTTTTTCCHHHHHHH-----HHHHHHHHHHH--CCHHHHHHTCSSCCCEEEEECCSCSHHHH
T ss_pred HHHHhhcccchHHHHHHHHHHhhhcchhhhhhc-----cchhHHHHhhc--cchhhHHhhcCCCceEEEEecCccchhHH
Confidence 000000000000 00000000000000 00000000000 01123456789999999874433322 3
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
...+.+++.+ +++++++++++||++++|+|++|++.|.+||++.
T Consensus 229 ~~~~~~~~~~-p~a~~~~i~~~gH~~~~e~P~~~~~~i~~Fl~~~ 272 (276)
T 2wj6_A 229 KINSDFAEQH-PWFSYAKLGGPTHFPAIDVPDRAAVHIREFATAI 272 (276)
T ss_dssp HHHHHHHHHC-TTEEEEECCCSSSCHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhC-CCeEEEEeCCCCCcccccCHHHHHHHHHHHHhhc
Confidence 4556777888 7999999999999999999999999999999753
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-37 Score=261.66 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=160.4
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC----CCCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR----PERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~----~~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
+|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|+... ...+...+++++.++++++++++++|+|||
T Consensus 20 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 98 (271)
T 1wom_A 20 KASIMFAPGFGCDQS-VWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHS 98 (271)
T ss_dssp SSEEEEECCTTCCGG-GGTTTGGGGTTTSEEEECCCSCCSSSCCTTCCTTGGGSHHHHHHHHHHHHHHTTCSCEEEEEET
T ss_pred CCcEEEEcCCCCchh-hHHHHHHHHHhcCeEEEECCCCCCCCCCCcccccccccHHHHHHHHHHHHHHcCCCCeEEEEeC
Confidence 478999999999885 699999999989999999999999997542 123556678999999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
|||.+|+.+|.++|++|+++|++++........ .....+.............. ....+...+........ ....
T Consensus 99 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 173 (271)
T 1wom_A 99 VGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEK-NYIGWATVFAATVLNQP----DRPE 173 (271)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHH-CHHHHHHHHHHHHHCCT----TCHH
T ss_pred HHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhh-hHHHHHHHHHHHHhcCC----CchH
Confidence 999999999999999999999997653221100 00000000000000000000 00000000000111110 0111
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~ 283 (315)
....+......................+....+.++++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~ 252 (271)
T 1wom_A 174 IKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHL-PYSSLKQMEARGHCPH 252 (271)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHS-SSEEEEEEEEESSCHH
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHC-CCCEEEEeCCCCcCcc
Confidence 111221111110011111111111111223456789999999999999999999999999988 6899999999999999
Q ss_pred cCChHHHHHHHHHHHhc
Q 021229 284 YEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~ 300 (315)
.|+|++|++.|.+||++
T Consensus 253 ~e~p~~~~~~i~~fl~~ 269 (271)
T 1wom_A 253 MSHPDETIQLIGDYLKA 269 (271)
T ss_dssp HHCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh
Confidence 99999999999999975
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=255.31 Aligned_cols=257 Identities=21% Similarity=0.287 Sum_probs=170.6
Q ss_pred eeecCCCceEEEEEecCCCCCCCc-EEEEccCC---CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-CCCchhH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPD-LVLIHGLG---ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-ERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~-vvllHG~~---~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~ 102 (315)
++++ +|..++|.... + ++++ ||||||++ .+. ..|..+++.|.+.|+|+++|+||||.|..+.. .++...+
T Consensus 11 ~~~~-~g~~l~y~~~g--~-~g~p~vvllHG~~~~~~~~-~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 85 (285)
T 1c4x_A 11 RFPS-GTLASHALVAG--D-PQSPAVVLLHGAGPGAHAA-SNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSW 85 (285)
T ss_dssp EECC-TTSCEEEEEES--C-TTSCEEEEECCCSTTCCHH-HHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHH
T ss_pred EEEE-CCEEEEEEecC--C-CCCCEEEEEeCCCCCCcch-hhHHHHHHHHhhCcEEEEecCCCCCCCCCCCCcccchhhh
Confidence 4444 67788988752 1 2345 99999997 444 36999999998889999999999999975433 4566677
Q ss_pred ----HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 103 ----AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 103 ----a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++....... .... .......+...
T Consensus 86 ~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~------~~~~~~~~~~~ 158 (285)
T 1c4x_A 86 VGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNA-RPPE------LARLLAFYADP 158 (285)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSS-CCHH------HHHHHTGGGSC
T ss_pred hhhHHHHHHHHHHHhCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCc-cchh------HHHHHHHhccc
Confidence 899999999999999999999999999999999999999999999765422110 0000 00000001111
Q ss_pred CchHHHHHHHhhhccCCCCCCC--CcchhHHHHHHHH-HHHHHHHHHhh---hccCc--cccccccccCCCCeEEEEeCC
Q 021229 179 SPGKLKELMRYTFFKRPPLSLV--PSCLLSDYIDAMC-TEYLEEKRELV---RAIPK--DRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~--~~~~~~l~~i~~P~lvi~G~~ 250 (315)
....+...+....... . .. ............. ........... ..... ......+.++++|+|+|+|++
T Consensus 159 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 235 (285)
T 1c4x_A 159 RLTPYRELIHSFVYDP-E--NFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQ 235 (285)
T ss_dssp CHHHHHHHHHTTSSCS-T--TCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETT
T ss_pred cHHHHHHHHHHhhcCc-c--cccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCC
Confidence 1122222222211111 0 01 1111111111100 00011111111 00010 002235678999999999999
Q ss_pred CCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 251 DQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|.++|.+.++.+++.+ +++++++++++||+++.|+|++|++.|.+||++
T Consensus 236 D~~~p~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 236 DRIVPLDTSLYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 284 (285)
T ss_dssp CSSSCTHHHHHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred CeeeCHHHHHHHHHhC-CCceEEEeCCCCcchhhcCHHHHHHHHHHHHhc
Confidence 9999999999999988 689999999999999999999999999999974
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=260.89 Aligned_cols=256 Identities=18% Similarity=0.238 Sum_probs=167.2
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-CCCchhHHHHHHHHHHH
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-ERSESFQAECVMRVMEA 112 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~ 112 (315)
+.+++|... +++++|||+||++++.. .|..+++.|++.|+|+++|+||||.|..+.. .++...+++++.+++++
T Consensus 5 ~~~~~y~~~----G~g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~dl~~~l~~ 79 (269)
T 2xmz_A 5 HYKFYEANV----ETNQVLVFLHGFLSDSR-TYHNHIEKFTDNYHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK 79 (269)
T ss_dssp SEEEECCSS----CCSEEEEEECCTTCCGG-GGTTTHHHHHTTSEEEEECCTTSTTCCCCTTSCCCHHHHHHHHHHHHGG
T ss_pred cceEEEEEc----CCCCeEEEEcCCCCcHH-HHHHHHHHHhhcCeEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Confidence 345565542 33458999999999886 6999999998889999999999999986544 46777789999999999
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhc
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFF 192 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (315)
+++++++|+||||||.+|+.+|.++|++|+++|++++.......... .............+.. .....+... +.
T Consensus 80 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~-~~ 153 (269)
T 2xmz_A 80 YKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQ--LERRLVDDARAKVLDI---AGIELFVND-WE 153 (269)
T ss_dssp GTTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHH--HHHHHHHHHHHHHHHH---HCHHHHHHH-HT
T ss_pred cCCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhH--HHHhhhhhHHHHhhcc---ccHHHHHHH-HH
Confidence 99999999999999999999999999999999999865443221100 0000000000000000 000111111 11
Q ss_pred cCCCCC---CCCcchhHHHHHHHHHHHHHHHHHhhhcc---CccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc
Q 021229 193 KRPPLS---LVPSCLLSDYIDAMCTEYLEEKRELVRAI---PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL 266 (315)
Q Consensus 193 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~ 266 (315)
..+... ..+......+...............+..+ ........+.++++|+|+|+|++|.++|.+..+ +.+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~ 232 (269)
T 2xmz_A 154 KLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI 232 (269)
T ss_dssp TSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS
T ss_pred hCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC
Confidence 000000 00111111111111111111111111111 112224467889999999999999999988765 88887
Q ss_pred CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 267 GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 267 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+++++++++++||++++|+|++|++.|.+||++..
T Consensus 233 -~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (269)
T 2xmz_A 233 -PNSKCKLISATGHTIHVEDSDEFDTMILGFLKEEQ 267 (269)
T ss_dssp -TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHC
T ss_pred -CCcEEEEeCCCCCChhhcCHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999997643
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=255.80 Aligned_cols=262 Identities=21% Similarity=0.322 Sum_probs=171.2
Q ss_pred eeeecC-CC--ceEEEEEecCCCCCCC-cEEEEccCC---CChhhhHHhhH-hhccccceEEeecCCCCCCCCCCCC-CC
Q 021229 27 SVTDLQ-DG--SVMHCWVPKTRNDSKP-DLVLIHGLG---ANALWQWTNII-PHMIHYFNVYVPDLLFFGDSFTTRP-ER 97 (315)
Q Consensus 27 ~~~~~~-~g--~~~~~~~~~~~~~~~~-~vvllHG~~---~~~~~~w~~~~-~~l~~~~~vi~~D~~G~G~S~~~~~-~~ 97 (315)
.++.++ +| ..++|.... + ++ +|||+||++ .+.. .|..++ +.|.+.|+|+++|+||||.|+.... .+
T Consensus 14 ~~~~~~~~g~~~~l~y~~~g--~--g~~~vvllHG~~~~~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 88 (289)
T 1u2e_A 14 RFLNVEEAGKTLRIHFNDCG--Q--GDETVVLLHGSGPGATGWA-NFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGS 88 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEC--C--CSSEEEEECCCSTTCCHHH-HTTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSC
T ss_pred eEEEEcCCCcEEEEEEeccC--C--CCceEEEECCCCcccchhH-HHHHhhhHHHhcCCeEEEEcCCCCCCCCCCCcccc
Confidence 345554 26 788888752 2 34 899999997 4443 688888 8898889999999999999976533 45
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
+...+++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++........ .. . ..............
T Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~ 165 (289)
T 1u2e_A 89 RSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLF-TP-M-PTEGIKRLNQLYRQ 165 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS-SC-S-SCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhCCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccc-cc-c-chhhHHHHHHHHhc
Confidence 566678999999999999999999999999999999999999999999997654211100 00 0 00000000000000
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhhcc--CccccccccccCCCCeEEEEeCCCCC
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVRAI--PKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
.....+...+...+... . ................ .........+... ...+....+.++++|+|+|+|++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 242 (289)
T 1u2e_A 166 PTIENLKLMMDIFVFDT-S--DLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRF 242 (289)
T ss_dssp CCHHHHHHHHHTTSSCT-T--SCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSS
T ss_pred chHHHHHHHHHHhhcCc-c--cCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCc
Confidence 11112222222111111 0 0111111111111100 0011111111111 11112346778999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|++.++.+.+.+ +++++++++++||++++|+|++|++.|.+||.+
T Consensus 243 ~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 243 VPMDAGLRLLSGI-AGSELHIFRDCGHWAQWEHADAFNQLVLNFLAR 288 (289)
T ss_dssp SCTHHHHHHHHHS-TTCEEEEESSCCSCHHHHTHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHhhC-CCcEEEEeCCCCCchhhcCHHHHHHHHHHHhcC
Confidence 9999999999988 689999999999999999999999999999974
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=262.76 Aligned_cols=267 Identities=19% Similarity=0.234 Sum_probs=169.7
Q ss_pred eeeeeecCCCceEEEEEecCCCCC--CCcEEEEccCCCChhhhHHhhHhhcc--ccceEEeecCCCCCCCCCCCC----C
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDS--KPDLVLIHGLGANALWQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRP----E 96 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~--~~~vvllHG~~~~~~~~w~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~----~ 96 (315)
.+.++.+ +|..++|+...+.+++ ++|||||||++++.. .|..+++.|. .+|+|+++|+||||.|+...+ .
T Consensus 29 ~~~~v~~-~g~~l~y~~~G~~~~~~~g~plvllHG~~~~~~-~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~~~~~~ 106 (330)
T 3nwo_A 29 SSRTVPF-GDHETWVQVTTPENAQPHALPLIVLHGGPGMAH-NYVANIAALADETGRTVIHYDQVGCGNSTHLPDAPADF 106 (330)
T ss_dssp CEEEEEE-TTEEEEEEEECCSSCCTTCCCEEEECCTTTCCS-GGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTTSCGGG
T ss_pred cceeEee-cCcEEEEEEecCccCCCCCCcEEEECCCCCCch-hHHHHHHHhccccCcEEEEECCCCCCCCCCCCCCcccc
Confidence 3345666 5888899886432223 448999999888775 5888888887 479999999999999975221 2
Q ss_pred CCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhc-ccc-----hh
Q 021229 97 RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFK-VSD-----LE 169 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~-~~~-----~~ 169 (315)
++...+++++.++++++++++++|+||||||+||+.+|.++|++|.++|+++++....... ....... ... +.
T Consensus 107 ~~~~~~a~dl~~ll~~lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTALGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALD 186 (330)
T ss_dssp CCHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHHH
Confidence 4556679999999999999999999999999999999999999999999998754321100 0000000 000 00
Q ss_pred hhhhhccCCCchHH---HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh--------hccCcccccccccc
Q 021229 170 EASKILVPQSPGKL---KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV--------RAIPKDRKISNIDK 238 (315)
Q Consensus 170 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 238 (315)
..........+... ..++....... . ..+..+...+ ..+... ......+. ..+...+....+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (330)
T 3nwo_A 187 RHEAAGTITHPDYLQAAAEFYRRHVCRV-V--PTPQDFADSV-AQMEAE-PTVYHTMNGPNEFHVVGTLGDWSVIDRLPD 261 (330)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHTCCS-S--SCCHHHHHHH-HHHHHS-CHHHHHHTCSCSSSCCSGGGGCBCGGGGGG
T ss_pred HHHhccCCCCHHHHHHHHHHHHHhhccc-c--CCCHHHHHHH-Hhhccc-hhhhhcccCchhhhhhccccCCchhhhccc
Confidence 00000000111111 11111111100 0 0111111111 111000 00000000 01111123456788
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|++|||+|+|++|.++|. ..+.+.+.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 262 i~~P~Lvi~G~~D~~~p~-~~~~~~~~i-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~ 321 (330)
T 3nwo_A 262 VTAPVLVIAGEHDEATPK-TWQPFVDHI-PDVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQ 321 (330)
T ss_dssp CCSCEEEEEETTCSSCHH-HHHHHHHHC-SSEEEEEETTCCTTHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeeCCCccChH-HHHHHHHhC-CCCcEEEeCCCCCchhhcCHHHHHHHHHHHHHh
Confidence 999999999999998875 577888888 799999999999999999999999999999975
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-37 Score=266.37 Aligned_cols=256 Identities=14% Similarity=0.217 Sum_probs=165.5
Q ss_pred eeeeeecCC---CceEEEEEecCCCCC-CCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCC--CCC
Q 021229 25 RSSVTDLQD---GSVMHCWVPKTRNDS-KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTR--PER 97 (315)
Q Consensus 25 ~~~~~~~~~---g~~~~~~~~~~~~~~-~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~--~~~ 97 (315)
...++++++ |.+++|.... +.+ +++||||||++++.. .|..+++.|++. |+|+++|+||||.|+.+. ..+
T Consensus 20 ~~~~~~~~g~~~g~~l~y~~~G--~~~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~~~~~~ 96 (297)
T 2xt0_A 20 APHYLEGLPGFEGLRMHYVDEG--PRDAEHTFLCLHGEPSWSF-LYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY 96 (297)
T ss_dssp CCEEECCCTTCTTCCEEEEEES--CTTCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGC
T ss_pred ccEEEeccCCCCceEEEEEEcc--CCCCCCeEEEECCCCCcce-eHHHHHHHHHhCCcEEEEeCCCCCCCCCCCCCcccC
Confidence 345666653 2889998763 224 679999999998875 699999999876 999999999999997543 246
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
+...+++++.++++++++++++||||||||.+|+.+|.++|++|+++|+++++....... ... . ..+...... .+
T Consensus 97 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~-~~~-~--~~~~~~~~~-~~ 171 (297)
T 2xt0_A 97 TFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSP-GKG-F--ESWRDFVAN-SP 171 (297)
T ss_dssp CHHHHHHHHHHHHHHHTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCS-CHH-H--HHHHHHHHT-CT
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCC-chh-H--HHHHHHhhc-cc
Confidence 777789999999999999999999999999999999999999999999998754111100 000 0 000000000 00
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccC---c-------cccccccc-cCCCCeEE
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIP---K-------DRKISNID-KITQPTLI 245 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~-------~~~~~~l~-~i~~P~lv 245 (315)
.... ...+.... .. ........+...... ........+..... . ......+. ++++|+|+
T Consensus 172 ~~~~--~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lv 243 (297)
T 2xt0_A 172 DLDV--GKLMQRAI-PG-----ITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFM 243 (297)
T ss_dssp TCCH--HHHHHHHS-TT-----CCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEE
T ss_pred ccch--hHHHhccC-cc-----CCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEE
Confidence 0000 00000000 00 000000000000000 00000000000000 0 00123456 89999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEE--EcCCCCccccCChHHHHHHHHHHHh
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIV--IKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~--i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
|+|++|.++| +.++.+.+.+ +++++.+ +++|||++++ +|++|++.|.+||+
T Consensus 244 i~G~~D~~~~-~~~~~~~~~~-p~~~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 244 AVGAQDPVLG-PEVMGMLRQA-IRGCPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp EEETTCSSSS-HHHHHHHHHH-STTCCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred EEeCCCcccC-hHHHHHHHhC-CCCeeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 9999999999 7888898888 6776654 7899999999 99999999999986
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=254.54 Aligned_cols=258 Identities=19% Similarity=0.265 Sum_probs=173.4
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-CCCc
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-ERSE 99 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~ 99 (315)
....++.+ +|..++|.... ++++|||+||++ .+.. .|..+++.|.+.|+|+++|+||||.|. +.. .++.
T Consensus 16 ~~~~~~~~-~g~~l~y~~~g----~g~~vvllHG~~~~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~-~~~~~~~~ 88 (296)
T 1j1i_A 16 YVERFVNA-GGVETRYLEAG----KGQPVILIHGGGAGAESEG-NWRNVIPILARHYRVIAMDMLGFGKTA-KPDIEYTQ 88 (296)
T ss_dssp CEEEEEEE-TTEEEEEEEEC----CSSEEEEECCCSTTCCHHH-HHTTTHHHHTTTSEEEEECCTTSTTSC-CCSSCCCH
T ss_pred CcceEEEE-CCEEEEEEecC----CCCeEEEECCCCCCcchHH-HHHHHHHHHhhcCEEEEECCCCCCCCC-CCCCCCCH
Confidence 34455666 68888988752 357899999987 5544 699999999888999999999999998 433 5566
Q ss_pred hhHHHHHHHHHHHcCC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 100 SFQAECVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
..+++++.++++++++ ++++|+||||||.+|+.+|.++|++|+++|++++....... ..... .... . ..
T Consensus 89 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~--~~~~~------~~~~-~-~~ 158 (296)
T 1j1i_A 89 DRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEI--HEDLR------PIIN-Y-DF 158 (296)
T ss_dssp HHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC-------------------C-CS
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCC--CchHH------HHhc-c-cC
Confidence 7779999999999998 89999999999999999999999999999999765422111 00000 0000 0 01
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHHhhhcc---C-ccccccccccCCCCeEEEEeCCCCC
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRELVRAI---P-KDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
....+...+......... .............. ..........+... . .......+.++++|+|+|+|++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~ 235 (296)
T 1j1i_A 159 TREGMVHLVKALTNDGFK---IDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKV 235 (296)
T ss_dssp CHHHHHHHHHHHSCTTCC---CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSS
T ss_pred CchHHHHHHHHhccCccc---ccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcc
Confidence 111222222222211111 11111111111110 00011111111110 0 0112235678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+|.+.++.+.+.+ +++++++++++||+++.|+|++|++.|.+||.+..
T Consensus 236 ~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 236 VPVETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRV 283 (296)
T ss_dssp SCHHHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHC-CCCEEEEECCCCCCchhcCHHHHHHHHHHHHhccC
Confidence 9999999999988 68999999999999999999999999999998654
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=259.77 Aligned_cols=261 Identities=18% Similarity=0.212 Sum_probs=168.5
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
.+|..++|+... ++++|||+||++++.. .|.++++.|.+. |+|+++|+||||.|..+...++...+++++.+++
T Consensus 10 ~~g~~l~y~~~g----~~~pvvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l 84 (279)
T 1hkh_A 10 STPIELYYEDQG----SGQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVL 84 (279)
T ss_dssp TEEEEEEEEEES----SSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHH
T ss_pred CCCeEEEEEecC----CCCcEEEEcCCCchhh-HHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 467788887752 3467999999999885 699999999875 9999999999999986555567777899999999
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhhhh-hhceeEEeeCCCccCchhhh-hhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFKE-KIEKVVICCSGVCLEEQDLR-DRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
++++.++++|+||||||.+++.+|.++|+ +|+++|++++.......... .......................+.....
T Consensus 85 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (279)
T 1hkh_A 85 ETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYK 164 (279)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HhcCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHh
Confidence 99999999999999999999999999998 99999999764321100000 00000000000000000000001111111
Q ss_pred hhhccCC--CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC---CCCeEEEEeCCCCCCchHHH-HHH
Q 021229 189 YTFFKRP--PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI---TQPTLILWGEHDQIFPLELG-RRL 262 (315)
Q Consensus 189 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---~~P~lvi~G~~D~~~~~~~~-~~l 262 (315)
.++... ............+...............+..+ ..+....+.++ ++|+|+|+|++|.++|.+.+ +.+
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~ 242 (279)
T 1hkh_A 165 -NFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAW-IEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRF 242 (279)
T ss_dssp -HHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHH-TCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHH
T ss_pred -hhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHH-hhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHH
Confidence 111100 00001111111111111000000011111111 11222345677 99999999999999998877 888
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.+ +++++++++++||+++.|+|+++++.|.+||++
T Consensus 243 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 279 (279)
T 1hkh_A 243 HQAV-PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp HHHC-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred HHhC-CCeeEEEeCCCCccchhcCHHHHHHHHHHHhhC
Confidence 8888 689999999999999999999999999999963
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=253.34 Aligned_cols=246 Identities=17% Similarity=0.209 Sum_probs=161.4
Q ss_pred EEEEEecCC-CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC
Q 021229 37 MHCWVPKTR-NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV 115 (315)
Q Consensus 37 ~~~~~~~~~-~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~ 115 (315)
++|....+. .+++++|||+||++++.. .|..+++.|++.|+|+++|+||||.|.... ..+...+++++.++++++++
T Consensus 3 l~y~~~G~~~~~~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~-~~~~~~~a~dl~~~l~~l~~ 80 (255)
T 3bf7_A 3 LNIRAQTAQNQHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHNIIQVDVRNHGLSPREP-VMNYPAMAQDLVDTLDALQI 80 (255)
T ss_dssp CCEEEECCSSCCCCCCEEEECCTTCCTT-TTHHHHHHHTTTSCEEEECCTTSTTSCCCS-CCCHHHHHHHHHHHHHHHTC
T ss_pred eeeeecCccccCCCCCEEEEcCCcccHh-HHHHHHHHHHhhCcEEEecCCCCCCCCCCC-CcCHHHHHHHHHHHHHHcCC
Confidence 456554211 125789999999999885 699999999988999999999999997543 45666789999999999999
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP 195 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (315)
++++|+||||||.+|+.+|.++|++|+++|++++.+............. .+...... ...........+.. .
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~----~- 152 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFA--AINAVSES-DAQTRQQAAAIMRQ----H- 152 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHH--HHHHHHHS-CCCSHHHHHHHHTT----T-
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHH--HHHhcccc-ccccHHHHHHHHhh----h-
Confidence 9999999999999999999999999999999875432211000000000 00000000 00000000000000 0
Q ss_pred CCCCCCcchhHHHHHHH-----HHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCc
Q 021229 196 PLSLVPSCLLSDYIDAM-----CTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA 270 (315)
Q Consensus 196 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~ 270 (315)
.+......+.... ...........+..+. ....++++++|+|+|+|++|.+++++.++.+++.+ +++
T Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~ 224 (255)
T 3bf7_A 153 ----LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV---GWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF-PQA 224 (255)
T ss_dssp ----CCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHH---CCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC-TTE
T ss_pred ----cchhHHHHHHHHhccCCceeecHHHHHhhhhhcc---ccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC-CCC
Confidence 0000000000000 0000000000000000 01235689999999999999999999999999988 689
Q ss_pred EEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 271 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++++++++||+++.|+|++|++.|.+||++
T Consensus 225 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 225 RAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_dssp EECCBTTCCSCHHHHCHHHHHHHHHHHHHT
T ss_pred eEEEeCCCCCccccCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999974
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=257.69 Aligned_cols=266 Identities=17% Similarity=0.185 Sum_probs=169.6
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhH-hhcccc-ceEEeecCCCCCCCCC--C-CCCCCc
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNII-PHMIHY-FNVYVPDLLFFGDSFT--T-RPERSE 99 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~-~~l~~~-~~vi~~D~~G~G~S~~--~-~~~~~~ 99 (315)
.+.+++. ||.+++|.... ++++|+||||||++++.. .|.+++ +.|.+. |+|+++|+||||.|+. + ...++.
T Consensus 2 ~~~~~~~-~g~~l~y~~~G--~~~~~~vvllHG~~~~~~-~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~~~~~~~~~ 77 (298)
T 1q0r_A 2 SERIVPS-GDVELWSDDFG--DPADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGF 77 (298)
T ss_dssp CEEEEEE-TTEEEEEEEES--CTTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCH
T ss_pred CCceecc-CCeEEEEEecc--CCCCCeEEEEcCCCCCcc-chHHHHHHHHHhCCCEEEeeCCCCCCCCCCCCCCcCCcCH
Confidence 3445554 68889998763 335679999999999885 697754 888876 9999999999999975 2 234667
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC-ccCchhhhhh---------hhcccc--
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV-CLEEQDLRDR---------MFKVSD-- 167 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~-~~~~~~~~~~---------~~~~~~-- 167 (315)
..+++++.++++++++++++|+||||||.+|+.+|.++|++|+++|++++.. .......... ......
T Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (298)
T 1q0r_A 78 GELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQP 157 (298)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccHH
Confidence 7789999999999999999999999999999999999999999999997654 2100000000 000000
Q ss_pred -hhhhhhhccC-CCchHHHH-HHH--hhhccCCCCCCCCcchhHHHHHHHHHHH--HHHH-HHhhhccCccccccc-ccc
Q 021229 168 -LEEASKILVP-QSPGKLKE-LMR--YTFFKRPPLSLVPSCLLSDYIDAMCTEY--LEEK-RELVRAIPKDRKISN-IDK 238 (315)
Q Consensus 168 -~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-l~~ 238 (315)
.........+ .......+ ... ..+... .. ........++........ .... ...+......+.... +.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (298)
T 1q0r_A 158 FLDALALMNQPAEGRAAEVAKRVSKWRILSGT-GV-PFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELRE 235 (298)
T ss_dssp HHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCS-SS-CCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGG
T ss_pred HHHHHhccCcccccHHHHHHHHHHhhhhccCC-CC-CCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCcccccccccc
Confidence 0000000000 01111111 110 001000 00 011111111111110000 0000 000010111122345 788
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++|+|+|+|++|.++|++.++.+++.+ +++++++++++|| |.|+++++.|.+||.+.
T Consensus 236 i~~P~Lvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH----e~p~~~~~~i~~fl~~~ 293 (298)
T 1q0r_A 236 VTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGH----ALPSSVHGPLAEVILAH 293 (298)
T ss_dssp CCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCS----SCCGGGHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCccCCHHHHHHHHHhC-CCCEEEEcCCCCC----CCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 7899999999999 88999999999999753
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=255.22 Aligned_cols=270 Identities=18% Similarity=0.224 Sum_probs=178.7
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
++...++++ +|..++|...+ ++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|..+....+...+
T Consensus 9 ~~~~~~~~~-~g~~l~~~~~g----~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 82 (301)
T 3kda_A 9 GFESAYREV-DGVKLHYVKGG----QGPLVMLVHGFGQTWY-EWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGYSGEQV 82 (301)
T ss_dssp TCEEEEEEE-TTEEEEEEEEE----SSSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTCCCCSSCSSHHHH
T ss_pred ccceEEEee-CCeEEEEEEcC----CCCEEEEECCCCcchh-HHHHHHHHHHhcCeEEEEcCCCCCCCCCCCCCccHHHH
Confidence 355556666 68888988762 5679999999999885 69999999998899999999999999876666777788
Q ss_pred HHHHHHHHHHcCCCc-eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh--cc-cch--------hh
Q 021229 103 AECVMRVMEAHSVKK-LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF--KV-SDL--------EE 170 (315)
Q Consensus 103 a~~~~~~l~~l~~~~-v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~--~~-~~~--------~~ 170 (315)
++++.+++++++.++ ++|+||||||.+|+.+|.++|++|+++|+++++............. .. ..+ ..
T Consensus 83 ~~~l~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (301)
T 3kda_A 83 AVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAADDR 162 (301)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHCSTT
T ss_pred HHHHHHHHHHcCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhcCcc
Confidence 999999999999998 9999999999999999999999999999998754322110000000 00 000 00
Q ss_pred hhhhccCCCchH-HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHH-HHHHHHhhhccCc-----cccccccccCCCCe
Q 021229 171 ASKILVPQSPGK-LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY-LEEKRELVRAIPK-----DRKISNIDKITQPT 243 (315)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~i~~P~ 243 (315)
....+....... +..++....... . .........+........ .......+..+.. ......+.++++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 239 (301)
T 3kda_A 163 LAETLIAGKERFFLEHFIKSHASNT-E--VFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMT 239 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCSSG-G--GSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEE
T ss_pred hHHHHhccchHHHHHHHHHhccCCc-c--cCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcce
Confidence 001111111111 111221111110 0 111111222211111100 0111111111100 00122345899999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
|+|+|++| ++....+.+.+.+ +++++++++++||++++|+|+++++.|.+|+++..+.
T Consensus 240 l~i~G~~D--~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~~~ 297 (301)
T 3kda_A 240 LAGGGAGG--MGTFQLEQMKAYA-EDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGRHH 297 (301)
T ss_dssp EEECSTTS--CTTHHHHHHHTTB-SSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSCCC
T ss_pred EEEecCCC--CChhHHHHHHhhc-ccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCchh
Confidence 99999999 7778888898888 7899999999999999999999999999999976654
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=253.66 Aligned_cols=264 Identities=16% Similarity=0.203 Sum_probs=167.8
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCchh
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSESF 101 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~ 101 (315)
+.+......+|.+++|+...+.+ .+++||||||++++.. .|..+++.|+++|+|+++|+||||.|+... ..++...
T Consensus 5 ~~~~~~~~~~g~~l~~~~~g~~~-~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~ 82 (285)
T 3bwx_A 5 YEDRYWTSSDGLRLHFRAYEGDI-SRPPVLCLPGLTRNAR-DFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQ 82 (285)
T ss_dssp SEEEEEECTTSCEEEEEEECBCT-TSCCEEEECCTTCCGG-GGHHHHHHHBBTBCEEEECCTTBTTSCCCSSGGGCSHHH
T ss_pred cccCeeecCCCceEEEEEcCCCC-CCCcEEEECCCCcchh-hHHHHHHHhhcCCEEEeecCCCCCCCCCCCCccccCHHH
Confidence 34555666689999998764221 2679999999999885 699999999989999999999999997542 2355666
Q ss_pred HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 102 ~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
+++++.++++++++++++|+||||||.+|+.+|.++|++|+++|+++++......... ....... .........
T Consensus 83 ~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~ 156 (285)
T 3bwx_A 83 YLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLE-RIRGYVG-----QGRNFETWM 156 (285)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHH-HHHHHTT-----CCCEESSHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhH-HHHHHhc-----CCcccccHH
Confidence 7999999999999999999999999999999999999999999998754433211110 0000000 000000000
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHH------HHHhhhccCc-------cccccccccC-CCCeEEEE
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEE------KRELVRAIPK-------DRKISNIDKI-TQPTLILW 247 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~l~~i-~~P~lvi~ 247 (315)
.....+...+..... .........+........... .......+.. .+....+.++ ++|+|+|+
T Consensus 157 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 234 (285)
T 3bwx_A 157 HAARALQESSGDVYP--DWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLR 234 (285)
T ss_dssp HHHHHHHHHHTTTST--TCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHHhhhhccc--ccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEE
Confidence 001111111100000 000000000000000000000 0000000000 0011122345 79999999
Q ss_pred eCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 248 GEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 248 G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|++|.+++++.++.+++. +++++++++++||+++.|+|+.+ +.|.+||++
T Consensus 235 G~~D~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~~-~~i~~fl~~ 284 (285)
T 3bwx_A 235 GETSDILSAQTAAKMASR--PGVELVTLPRIGHAPTLDEPESI-AAIGRLLER 284 (285)
T ss_dssp ETTCSSSCHHHHHHHHTS--TTEEEEEETTCCSCCCSCSHHHH-HHHHHHHTT
T ss_pred eCCCCccCHHHHHHHHhC--CCcEEEEeCCCCccchhhCchHH-HHHHHHHHh
Confidence 999999999999999887 58999999999999999999987 589999975
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=250.72 Aligned_cols=253 Identities=15% Similarity=0.136 Sum_probs=168.9
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~ 107 (315)
++++ +|..++|.... ++++|+|||+||++++.. .|..+++.|+++|+|+++|+||||.|..+...++...+++++.
T Consensus 3 ~~~~-~g~~l~~~~~g--~~~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 78 (264)
T 3ibt_A 3 SLNV-NGTLMTYSESG--DPHAPTLFLLSGWCQDHR-LFKNLAPLLARDFHVICPDWRGHDAKQTDSGDFDSQTLAQDLL 78 (264)
T ss_dssp CCEE-TTEECCEEEES--CSSSCEEEEECCTTCCGG-GGTTHHHHHTTTSEEEEECCTTCSTTCCCCSCCCHHHHHHHHH
T ss_pred eEee-CCeEEEEEEeC--CCCCCeEEEEcCCCCcHh-HHHHHHHHHHhcCcEEEEccccCCCCCCCccccCHHHHHHHHH
Confidence 3455 67788888763 345789999999999886 6999999999889999999999999987666667777899999
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH-HHH
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK-LKE 185 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (315)
+++++++.++++|+||||||.+++.+|.++ |++|+++|++++.. .............. ....... ...
T Consensus 79 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~ 148 (264)
T 3ibt_A 79 AFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL-QPHPGFWQQLAEGQ---------HPTEYVAGRQS 148 (264)
T ss_dssp HHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS-SCCHHHHHHHHHTT---------CTTTHHHHHHH
T ss_pred HHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC-CcChhhcchhhccc---------ChhhHHHHHHH
Confidence 999999999999999999999999999999 99999999998766 22221111111000 0000000 111
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccC-----ccccccccccCCCCeEEEEe--CCCCCCchHH
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIP-----KDRKISNIDKITQPTLILWG--EHDQIFPLEL 258 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~i~~P~lvi~G--~~D~~~~~~~ 258 (315)
.....+... . .......+.+.+..............+. .......+.++++|+++|+| ++|...+.+.
T Consensus 149 ~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~ 223 (264)
T 3ibt_A 149 FFDEWAETT-D----NADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQL 223 (264)
T ss_dssp HHHHHHTTC-C----CHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHH
T ss_pred HHHHhcccC-C----cHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHH
Confidence 111111110 0 0011111111000000000000000000 00122456789999999965 4455555677
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 259 ~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.+.+.+ +++++++++++||+++.|+|+++++.|.+||++
T Consensus 224 ~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 264 (264)
T 3ibt_A 224 QLEFAAGH-SWFHPRHIPGRTHFPSLENPVAVAQAIREFLQA 264 (264)
T ss_dssp HHHHHHHC-TTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC-
T ss_pred HHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 88888888 689999999999999999999999999999863
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=248.83 Aligned_cols=245 Identities=15% Similarity=0.214 Sum_probs=165.2
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCC----CCCCCCchhHHHHHHHHHHHcCCCceEEEEE
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT----TRPERSESFQAECVMRVMEAHSVKKLSLVGL 123 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~----~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGh 123 (315)
++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|.. .....+....++++.++++.++.++++|+||
T Consensus 19 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gh 97 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQS-AWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRRYTTLDPYVDDLLHILDALGIDCCAYVGH 97 (269)
T ss_dssp CSSEEEEECCTTCCGG-GGTTTGGGGTTTCEEEEECCTTSTTSCGGGCCTTTCSSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CCCEEEEEeCCCCcHH-HHHHHHHHHhCCcEEEEEcCCCCCCCCCCCCCccccCcHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 4579999999999886 6999999999899999999999999964 1223366677999999999999999999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
||||.+|+.+|.++|++|+++|++++............................ ........+....... ....
T Consensus 98 S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~ 171 (269)
T 4dnp_A 98 SVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEA-NYEAWVNGFAPLAVGA-----DVPA 171 (269)
T ss_dssp THHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHH-CHHHHHHHHHHHHHCS-----SCHH
T ss_pred CHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccc-cHHHHHHHhhhhhccC-----CChh
Confidence 999999999999999999999999876543221100000000000000000000 0111111111111111 0111
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCC-cEEEEEcCCCCcc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN-AQLIVIKKAGHAF 282 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~-~~~~~i~~~gH~~ 282 (315)
....+..................+...+....+.++++|+++|+|++|.++|.+.++.+.+.+ ++ +++++++++||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~ 250 (269)
T 4dnp_A 172 AVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHL-GGKNTVHWLNIEGHLP 250 (269)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHS-SSCEEEEEEEEESSCH
T ss_pred HHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhC-CCCceEEEeCCCCCCc
Confidence 222222222211111112222222222344567789999999999999999999999999998 45 8999999999999
Q ss_pred ccCChHHHHHHHHHHHhc
Q 021229 283 NYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 283 ~~e~p~~~~~~i~~fl~~ 300 (315)
+.|+|+++++.|.+||++
T Consensus 251 ~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 251 HLSAPTLLAQELRRALSH 268 (269)
T ss_dssp HHHCHHHHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHHHhh
Confidence 999999999999999975
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-36 Score=252.34 Aligned_cols=250 Identities=19% Similarity=0.213 Sum_probs=153.3
Q ss_pred eEEEEEecCCCCCCC-cEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC
Q 021229 36 VMHCWVPKTRNDSKP-DLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS 114 (315)
Q Consensus 36 ~~~~~~~~~~~~~~~-~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~ 114 (315)
.++|... + +++ +|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.. ..++...++ .++++.++
T Consensus 3 ~l~~~~~--G--~g~~~vvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-~~~~~~~~~---~~l~~~l~ 73 (258)
T 1m33_A 3 NIWWQTK--G--QGNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGF-GALSLADMA---EAVLQQAP 73 (258)
T ss_dssp CCCEEEE--C--CCSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSC-CCCCHHHHH---HHHHTTSC
T ss_pred ceEEEEe--c--CCCCeEEEECCCCCChH-HHHHHHHHhhcCcEEEEeeCCCCCCCCCC-CCcCHHHHH---HHHHHHhC
Confidence 3566654 2 346 8999999999886 69999999998899999999999999765 334444334 34455566
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKR 194 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (315)
++++|+||||||.+|+.+|.++|++|+++|++++.+............. .........+..........+........
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKP-DVLAGFQQQLSDDQQRTVERFLALQTMGT 151 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTS
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCH-HHHHHHHHHHhccHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999976543221100000000 00000000000000000001100000000
Q ss_pred CCCCCCCcchhHHHHHHHHHH---HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcE
Q 021229 195 PPLSLVPSCLLSDYIDAMCTE---YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271 (315)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~ 271 (315)
. ........+....... ........+..+...+....+.++++|+|+|+|++|.++|.+.++.+.+.+ ++++
T Consensus 152 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~ 226 (258)
T 1m33_A 152 -E---TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSE 226 (258)
T ss_dssp -T---THHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCE
T ss_pred -c---cchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhC-ccce
Confidence 0 0000000000000000 000000000000011223456789999999999999999999888888887 6899
Q ss_pred EEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 272 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++++++||+++.|+|++|++.|.+|+++.
T Consensus 227 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 227 SYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp EEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999764
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=251.68 Aligned_cols=271 Identities=16% Similarity=0.241 Sum_probs=178.9
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
+...++.+ +|.+++|.... ++++|+|||+||++++.. .|..+.+.|+++|+|+++|+||||.|.......+...++
T Consensus 10 ~~~~~~~~-~g~~l~~~~~g--~~~~~~vl~lHG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~ 85 (299)
T 3g9x_A 10 FDPHYVEV-LGERMHYVDVG--PRDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHV 85 (299)
T ss_dssp CCCEEEEE-TTEEEEEEEES--CSSSCCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCTTSTTSCCCCCCCCHHHHH
T ss_pred cceeeeee-CCeEEEEEecC--CCCCCEEEEECCCCccHH-HHHHHHHHHccCCEEEeeCCCCCCCCCCCCCcccHHHHH
Confidence 34455666 67788988763 445789999999999886 699999999889999999999999998766567777789
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh-hh---hhcccchhhhhhhccCCC
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR-DR---MFKVSDLEEASKILVPQS 179 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~ 179 (315)
+++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.......... .. ..................
T Consensus 86 ~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
T 3g9x_A 86 RYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQ 165 (299)
T ss_dssp HHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHHHHHHTTS
T ss_pred HHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcchhhhccc
Confidence 99999999999999999999999999999999999999999999854433211100 00 000000000000000000
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCcc-----------ccccccccCCCCeEEEE
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKD-----------RKISNIDKITQPTLILW 247 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~P~lvi~ 247 (315)
...........+... ........+...... .........+...... +....+.++++|+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~ 240 (299)
T 3g9x_A 166 NAFIEGALPKCVVRP-----LTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFW 240 (299)
T ss_dssp CHHHHTHHHHTCSSC-----CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hhhHHHhhhhhhccC-----CCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEEEe
Confidence 111111111110000 011111111000000 0000000111111000 11223567899999999
Q ss_pred eCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 248 GEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 248 G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
|++|.++|.+.++.+.+.+ +++++++++++||++++|+|+++++.|.+|+.+..++
T Consensus 241 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~~~ 296 (299)
T 3g9x_A 241 GTPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALHHH 296 (299)
T ss_dssp EEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGCCC
T ss_pred cCCCCCCCHHHHHHHHhhC-CCCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999998 7899999999999999999999999999999876654
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=244.42 Aligned_cols=268 Identities=17% Similarity=0.208 Sum_probs=163.8
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQA 103 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a 103 (315)
.+.++.+ +|..++|....++ .++++|||+||++++....|..+...+.++|+|+++|+||||.|..+. ..++...++
T Consensus 6 ~~~~~~~-~g~~l~~~~~g~~-~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 83 (293)
T 1mtz_A 6 IENYAKV-NGIYIYYKLCKAP-EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGV 83 (293)
T ss_dssp EEEEEEE-TTEEEEEEEECCS-SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHH
T ss_pred cceEEEE-CCEEEEEEEECCC-CCCCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCCCCcccHHHHH
Confidence 3445666 5778888876321 123789999997554432244444444445999999999999997654 225566678
Q ss_pred HHHHHHHHHc-CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh-hhhhhc-ccc-h-hhhhhhc--c
Q 021229 104 ECVMRVMEAH-SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-RDRMFK-VSD-L-EEASKIL--V 176 (315)
Q Consensus 104 ~~~~~~l~~l-~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~-~~~-~-~~~~~~~--~ 176 (315)
+++.++++++ ++++++|+||||||.+|+.+|.++|++|+++|++++......... ...... ... . ....... .
T Consensus 84 ~dl~~~~~~l~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (293)
T 1mtz_A 84 EEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSG 163 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhccC
Confidence 9999999999 999999999999999999999999999999999977553211000 000000 000 0 0000000 0
Q ss_pred CCCchHHHHHHHh---hhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh--------hccCccccccccccCCCCeEE
Q 021229 177 PQSPGKLKELMRY---TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV--------RAIPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 177 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~i~~P~lv 245 (315)
............. ....... ..+.... ......... ....... ..+...+....+.++++|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 238 (293)
T 1mtz_A 164 SYENPEYQEAVNYFYHQHLLRSE--DWPPEVL-KSLEYAERR--NVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLI 238 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHTSCSS--CCCHHHH-HHHHHHHHS--SHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEE
T ss_pred CcChHHHHHHHHHHHHhhccccc--CchHHHH-HhHhhhccc--hhhhhccCcceecccccccCCChhhhhccCCCCEEE
Confidence 0000011111100 0000000 0111111 111100000 0000000 001111233456789999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+|++| .++++.++.+.+.+ +++++++++++||+++.|+|++|++.|.+||.+.
T Consensus 239 i~G~~D-~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (293)
T 1mtz_A 239 TVGEYD-EVTPNVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 292 (293)
T ss_dssp EEETTC-SSCHHHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred EeeCCC-CCCHHHHHHHHHhC-CCceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999 67778889999888 6899999999999999999999999999999754
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=255.70 Aligned_cols=261 Identities=16% Similarity=0.265 Sum_probs=164.0
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQAEC 105 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~ 105 (315)
..+++ +|..++|... +++.+|+||||||++++.. .|..+++.|.+.|+|+++|+||||.|+.+. ..++...++++
T Consensus 24 ~~~~~-~g~~l~y~~~--G~g~~~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~GhG~S~~~~~~~~~~~~~a~d 99 (318)
T 2psd_A 24 KQMNV-LDSFINYYDS--EKHAENAVIFLHGNATSSY-LWRHVVPHIEPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKY 99 (318)
T ss_dssp EEEEE-TTEEEEEEEC--CSCTTSEEEEECCTTCCGG-GGTTTGGGTTTTSEEEEECCTTSTTCCCCTTSCCSHHHHHHH
T ss_pred eEEee-CCeEEEEEEc--CCCCCCeEEEECCCCCcHH-HHHHHHHHhhhcCeEEEEeCCCCCCCCCCCCCccCHHHHHHH
Confidence 34555 6888898875 3344568999999998885 699999999988999999999999997653 23566778999
Q ss_pred HHHHHHHcCC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccC-c-hhhhh--hhhcccchhhhhhhccCCCc
Q 021229 106 VMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE-E-QDLRD--RMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 106 ~~~~l~~l~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~ 180 (315)
+.++++++++ ++++||||||||.||+.+|.++|++|+++|++++..... . ..... ..+.............. ..
T Consensus 100 l~~ll~~l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 178 (318)
T 2psd_A 100 LTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLE-NN 178 (318)
T ss_dssp HHHHHTTSCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHHHTT-TC
T ss_pred HHHHHHhcCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhhhhc-ch
Confidence 9999999999 999999999999999999999999999999987532111 0 00000 00000000000000000 00
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhhccCc------------cccccccccC-CCCeEE
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVRAIPK------------DRKISNIDKI-TQPTLI 245 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------------~~~~~~l~~i-~~P~lv 245 (315)
......+....... ........+...... ............+.. .+....+.++ ++|+|+
T Consensus 179 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lv 253 (318)
T 2psd_A 179 FFVETVLPSKIMRK-----LEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLF 253 (318)
T ss_dssp HHHHTHHHHTCSSC-----CCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEE
T ss_pred HHHHhhcccccccc-----CCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEE
Confidence 00000000000000 000000000000000 000000000000000 0011234567 999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+|++| ++++ .++.+.+.+ ++++++++ ++||++++|+|++|++.|.+||++.
T Consensus 254 i~G~~D-~~~~-~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 254 IESDPG-FFSN-AIVEGAKKF-PNTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERV 305 (318)
T ss_dssp EEEEEC-SSHH-HHHHHHTTS-SSEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHH
T ss_pred EEeccc-cCcH-HHHHHHHhC-CCcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHh
Confidence 999999 8888 888898888 68899999 7899999999999999999999754
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=246.27 Aligned_cols=241 Identities=18% Similarity=0.168 Sum_probs=152.3
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcC-CCceEEEEE
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHS-VKKLSLVGL 123 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~-~~~v~lvGh 123 (315)
+++++||||||++.+.. .|..+++.|.+ +|+|+++|+||||.|.... ..++...+++++.+++++++ .++++||||
T Consensus 8 ~~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGh 86 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW-IWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGH 86 (264)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEE
T ss_pred CCCCeEEEECCCccccc-hHHHHHHHHHhCCCEEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 46789999999998874 69999999964 6999999999999997532 23567778999999999996 689999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCch---hhhhhhhcccchhhhhhh---cc--C-CCc---hHHHHHHHhhh
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ---DLRDRMFKVSDLEEASKI---LV--P-QSP---GKLKELMRYTF 191 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~--~-~~~---~~~~~~~~~~~ 191 (315)
||||++++.+|.++|++|+++|++++....... .................. .. + ... ....+.....+
T Consensus 87 SmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 2wfl_A 87 SFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMILGPQFMALKM 166 (264)
T ss_dssp TTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEECCHHHHHHHT
T ss_pred ChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhhhHHHHHHHH
Confidence 999999999999999999999999864321110 000000000000000000 00 0 000 00001111111
Q ss_pred ccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcE
Q 021229 192 FKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271 (315)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~ 271 (315)
+.. .+.. ...+........ ......+........-...++|+|+|+|++|.++|.+.++.+++.+ ++++
T Consensus 167 ~~~-----~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-p~~~ 235 (264)
T 2wfl_A 167 FQN-----CSVE-DLELAKMLTRPG----SLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESV-GADK 235 (264)
T ss_dssp STT-----SCHH-HHHHHHHHCCCE----ECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHH-CCSE
T ss_pred hcC-----CCHH-HHHHHHhccCCC----cccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhC-CCce
Confidence 110 0000 000000000000 0000000000000000124689999999999999999999999988 6899
Q ss_pred EEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 272 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
++++++|||++++|+|++|++.|.+|+.
T Consensus 236 ~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 236 VKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp EEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred EEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 9999999999999999999999999985
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=247.67 Aligned_cols=271 Identities=20% Similarity=0.233 Sum_probs=170.3
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC-----CC
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP-----ER 97 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~-----~~ 97 (315)
+++..++.+ +|.+++|+... ++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|..... .+
T Consensus 12 ~~~~~~~~~-~g~~l~~~~~g----~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 85 (306)
T 3r40_A 12 GFGSEWINT-SSGRIFARVGG----DGPPLLLLHGFPQTHV-MWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPY 85 (306)
T ss_dssp TCEEEEECC-TTCCEEEEEEE----CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTSCCCCCCTTCGGG
T ss_pred CCceEEEEe-CCEEEEEEEcC----CCCeEEEECCCCCCHH-HHHHHHHHhccCCeEEEeCCCCCCCCCCCCCCcccCCC
Confidence 455566666 67788998752 5679999999999886 6999999999899999999999999986544 35
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc--------cchh
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV--------SDLE 169 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~--------~~~~ 169 (315)
+...+++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++................ ....
T Consensus 86 ~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (306)
T 3r40_A 86 TKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPA 165 (306)
T ss_dssp SHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCT
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhccc
Confidence 66677999999999999999999999999999999999999999999999875432211000000000 0000
Q ss_pred hhhhhccCCCch-HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCccc------cccccccCCC
Q 021229 170 EASKILVPQSPG-KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDR------KISNIDKITQ 241 (315)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~l~~i~~ 241 (315)
.....+...... .+...+....... ............+...... .........+....... ....+.++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 244 (306)
T 3r40_A 166 PLPENLLGGDPDFYVKAKLASWTRAG-DLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPV 244 (306)
T ss_dssp THHHHHHTSCHHHHHHHHHHHTSSSS-SSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCS
T ss_pred chHHHHHcCCHHHHHHHHhhcccCCC-ccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCc
Confidence 000000111111 1112221111110 0011222222222221111 00111111111111100 1114578999
Q ss_pred CeEEEEeCCCCCCc-hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 242 PTLILWGEHDQIFP-LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 242 P~lvi~G~~D~~~~-~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
|+|+|+|++|.++| ....+.+.+.. ++++++++ ++||+++.|+|+++++.|.+||++..
T Consensus 245 P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 304 (306)
T 3r40_A 245 PMLALWGASGIAQSAATPLDVWRKWA-SDVQGAPI-ESGHFLPEEAPDQTAEALVRFFSAAP 304 (306)
T ss_dssp CEEEEEETTCC------CHHHHHHHB-SSEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC--
T ss_pred ceEEEEecCCcccCchhHHHHHHhhc-CCCeEEEe-cCCcCchhhChHHHHHHHHHHHHhcc
Confidence 99999999999998 56667677766 68999999 78999999999999999999998653
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=248.00 Aligned_cols=267 Identities=20% Similarity=0.309 Sum_probs=167.3
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC-----C
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE-----R 97 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-----~ 97 (315)
++...++.+ +|..++|... +++++||||||++.+.. .|..+++.|.++|+|+++|+||||.|+.+... +
T Consensus 4 ~~~~~~~~~-~~~~~~~~~~----g~g~~~vllHG~~~~~~-~w~~~~~~l~~~~~vi~~Dl~G~G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 4 NFEQTIVDT-TEARINLVKA----GHGAPLLLLHGYPQTHV-MWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHINY 77 (291)
T ss_dssp TCEEEEEEC-SSCEEEEEEE----CCSSEEEEECCTTCCGG-GGTTTHHHHTTTSEEEEECCTTSTTSCCCCCCGGGGGG
T ss_pred CcceeEEec-CCeEEEEEEc----CCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcccccc
Confidence 455566777 5888999875 34679999999999885 69999999999999999999999999755332 4
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-----hhhhhhc---ccchh
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-----LRDRMFK---VSDLE 169 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-----~~~~~~~---~~~~~ 169 (315)
+...+++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++.+...... ....... .....
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPD 157 (291)
T ss_dssp SHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCST
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCC
Confidence 556678899999999999999999999999999999999999999999997643211000 0000000 00000
Q ss_pred hhhhhccCCCchHH-HHHHHhhhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHHhhhccCc----cccccccccCCCCe
Q 021229 170 EASKILVPQSPGKL-KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVRAIPK----DRKISNIDKITQPT 243 (315)
Q Consensus 170 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~l~~i~~P~ 243 (315)
.....+....+..+ ...+.. .... ...........+...+... ........++.... .+....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 234 (291)
T 3qyj_A 158 NLPETLIGANPEYYLRKCLEK-WGKD--FSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPV 234 (291)
T ss_dssp THHHHHHHTCHHHHHHHHHHH-HCSC--GGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCE
T ss_pred CchHHHHcCCHHHHHHHHHHh-cCCC--cccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccce
Confidence 00000000111111 111111 1110 0011112222222211110 00001111111111 01123467899999
Q ss_pred EEEEeCCCCCCch-HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 244 LILWGEHDQIFPL-ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 244 lvi~G~~D~~~~~-~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|+|+|++|.+.+. .....+.+.. ++.+..+++ |||+++.|+|+++++.|.+||..
T Consensus 235 Lvi~G~~D~~~~~~~~~~~~~~~~-~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~~ 290 (291)
T 3qyj_A 235 LVLWGEKGIIGRKYDVLATWRERA-IDVSGQSLP-CGHFLPEEAPEETYQAIYNFLTH 290 (291)
T ss_dssp EEEEETTSSHHHHSCHHHHHHTTB-SSEEEEEES-SSSCHHHHSHHHHHHHHHHHHHC
T ss_pred EEEecccccccchhhHHHHHHhhc-CCcceeecc-CCCCchhhCHHHHHHHHHHHHhc
Confidence 9999999976542 3445555555 678888885 89999999999999999999975
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=252.48 Aligned_cols=266 Identities=18% Similarity=0.277 Sum_probs=164.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCC--C--CCCCchhH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTT--R--PERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~--~--~~~~~~~~ 102 (315)
++.+ +|..++|+... ++|+||||||++++.. .|.++++.|.+ +|+|+++|+||||.|+.+ . ..++...+
T Consensus 15 ~~~~-~g~~l~y~~~G----~g~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~~~~ 88 (328)
T 2cjp_A 15 MVAV-NGLNMHLAELG----EGPTILFIHGFPELWY-SWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHL 88 (328)
T ss_dssp EEEE-TTEEEEEEEEC----SSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTCBCCCTTCGGGGSHHHH
T ss_pred EecC-CCcEEEEEEcC----CCCEEEEECCCCCchH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCcCcCCcccccHHHH
Confidence 3444 68889998752 3579999999999885 69999999975 599999999999999754 2 23456667
Q ss_pred HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch--hhhhhhhcccchhhhhhhc-cC
Q 021229 103 AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ--DLRDRMFKVSDLEEASKIL-VP 177 (315)
Q Consensus 103 a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~ 177 (315)
++++.+++++++ +++++|+||||||++|+.+|.++|++|+++|+++++...... ..................+ .+
T Consensus 89 a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (328)
T 2cjp_A 89 VGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVP 168 (328)
T ss_dssp HHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHHTSST
T ss_pred HHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHhhhCC
Confidence 999999999999 999999999999999999999999999999999765321100 0000000000000000000 00
Q ss_pred CCch------HHHHHHHhhhc--cC------CCCCC---------CCcchhHHHHHHHHHHHH----HHHHHhhhccCcc
Q 021229 178 QSPG------KLKELMRYTFF--KR------PPLSL---------VPSCLLSDYIDAMCTEYL----EEKRELVRAIPKD 230 (315)
Q Consensus 178 ~~~~------~~~~~~~~~~~--~~------~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 230 (315)
.... .....+...+. .. ....+ .+.++..+..+....... ......+..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (328)
T 2cjp_A 169 GEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPIN 248 (328)
T ss_dssp THHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHH
T ss_pred CcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcccc
Confidence 0000 01111111110 00 00000 001111111111100000 0000001110000
Q ss_pred c---cccccccCCCCeEEEEeCCCCCCchHH------HHHHHhhcCCCc-EEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 231 R---KISNIDKITQPTLILWGEHDQIFPLEL------GRRLKSHLGDNA-QLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 231 ~---~~~~l~~i~~P~lvi~G~~D~~~~~~~------~~~l~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
. ....+.++++|+|+|+|++|.++|++. ++.+.+.+ +++ ++++++++||+++.|+|++|++.|.+||++
T Consensus 249 ~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 327 (328)
T 2cjp_A 249 WELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDV-PLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQK 327 (328)
T ss_dssp HHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHS-TTBCCCEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred hhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHh-cCCeeEEEcCCCCCCcchhCHHHHHHHHHHHHHh
Confidence 0 011357899999999999999998742 25677777 688 899999999999999999999999999964
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-34 Score=240.41 Aligned_cols=264 Identities=14% Similarity=0.198 Sum_probs=169.8
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCchhH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSESFQ 102 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~ 102 (315)
+.++++++ |.+++|+.. +++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|.... ...+....
T Consensus 4 ~~~~~~~~-~~~~~y~~~----g~~~~vv~~HG~~~~~~-~~~~~~~~L~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~ 77 (278)
T 3oos_A 4 TTNIIKTP-RGKFEYFLK----GEGPPLCVTHLYSEYND-NGNTFANPFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTET 77 (278)
T ss_dssp EEEEEEET-TEEEEEEEE----CSSSEEEECCSSEECCT-TCCTTTGGGGGTSEEEEECCTTSTTSCCCSSGGGGSHHHH
T ss_pred ccCcEecC-CceEEEEec----CCCCeEEEEcCCCcchH-HHHHHHHHhhcCceEEEEcCCCCCCCCCCCCcccCcHHHH
Confidence 44567774 557888875 25679999999998886 599999999989999999999999997643 23456667
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc-----ccchhhhhhhccC
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK-----VSDLEEASKILVP 177 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 177 (315)
++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++............... ..........+..
T Consensus 78 ~~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (278)
T 3oos_A 78 IKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALND 157 (278)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcc
Confidence 89999999999999999999999999999999999999999999987654111100000000 0000000000000
Q ss_pred -CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhh--ccCccccccccccCCCCeEEEEeCCCCC
Q 021229 178 -QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVR--AIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
.........+......... ........+...... .........+. .+...+....+.++++|+|+|+|++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 234 (278)
T 3oos_A 158 DSTVQEERKALSREWALMSF---YSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQ 234 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHC---SCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSS
T ss_pred cccCchHHHHHHHHHhhccc---CCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCC
Confidence 0000000000000000000 000000000000000 00000000000 1112223345678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
+|.+.++.+.+.+ +++++++++++||+++.|+|+++++.|.+||
T Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 235 CPYIFSCEIANLI-PNATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp SCHHHHHHHHHHS-TTEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCHHHHHHHHhhC-CCcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 9999999999998 6899999999999999999999999999986
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=242.92 Aligned_cols=256 Identities=16% Similarity=0.241 Sum_probs=171.9
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+++ +|..++|... +++|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|..... .+...+++++
T Consensus 6 ~~~-~g~~l~y~~~----g~~~~vv~lhG~~~~~~-~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~ 78 (272)
T 3fsg_A 6 EYL-TRSNISYFSI----GSGTPIIFLHGLSLDKQ-STCLFFEPLSNVGQYQRIYLDLPGMGNSDPISP-STSDNVLETL 78 (272)
T ss_dssp CEE-CTTCCEEEEE----CCSSEEEEECCTTCCHH-HHHHHHTTSTTSTTSEEEEECCTTSTTCCCCSS-CSHHHHHHHH
T ss_pred EEe-cCCeEEEEEc----CCCCeEEEEeCCCCcHH-HHHHHHHHHhccCceEEEEecCCCCCCCCCCCC-CCHHHHHHHH
Confidence 444 5778888875 25679999999999886 69999999987 79999999999999976555 6777789999
Q ss_pred HHHHHH-cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 107 MRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 107 ~~~l~~-l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
.+++++ ++.++++|+||||||.+|+.+|.++|++|+++|++++........ ........... ..............
T Consensus 79 ~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~ 155 (272)
T 3fsg_A 79 IEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSK--RLTGKHINILE-EDINPVENKEYFAD 155 (272)
T ss_dssp HHHHHHHHTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGG--CCCCCCCCEEC-SCCCCCTTGGGHHH
T ss_pred HHHHHHHhCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccc--cccccchhhhh-hhhhcccCHHHHHH
Confidence 999999 889999999999999999999999999999999998765332111 00000000000 00000001111111
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHH----HHHHhhhccCc-cccccccccCCCCeEEEEeCCCCCCchHHHH
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLE----EKRELVRAIPK-DRKISNIDKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
+....... .......+.......... ....+...... ......+.++++|+|+|+|++|.++|.+..+
T Consensus 156 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 228 (272)
T 3fsg_A 156 FLSMNVII-------NNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQL 228 (272)
T ss_dssp HHHHCSEE-------SHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHH
T ss_pred HHHHhccC-------CCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHH
Confidence 11111100 001111111111110000 00111111110 0111245788999999999999999999999
Q ss_pred HHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 261 RLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 261 ~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.+.+.+ +++++++++++||+++.|+|+++++.|.+||++..
T Consensus 229 ~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 229 KLINHN-ENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp HHHTTC-TTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhh
Confidence 999988 68999999999999999999999999999998643
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=243.76 Aligned_cols=241 Identities=18% Similarity=0.152 Sum_probs=152.6
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcC-CCceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHS-VKKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSm 125 (315)
+++||||||++.++. .|..+++.|.+ +|+|+++|+||||.|.... ..++...+++++.+++++++ .++++||||||
T Consensus 3 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (257)
T 3c6x_A 3 FAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESC 81 (257)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEET
T ss_pred CCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccCCeEEEEECc
Confidence 468999999998874 69999999975 5999999999999997532 34567778999999999995 68999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCch---hhhhhhhc-ccchhhhhh-hcc----C-CCchHHHHHHHhhhccCC
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ---DLRDRMFK-VSDLEEASK-ILV----P-QSPGKLKELMRYTFFKRP 195 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~---~~~~~~~~-~~~~~~~~~-~~~----~-~~~~~~~~~~~~~~~~~~ 195 (315)
||++++.+|.++|++|+++|++++....... ........ ......... .+. + .......+.....++..
T Consensus 82 GG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (257)
T 3c6x_A 82 GGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTL- 160 (257)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT-
T ss_pred chHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHHHHHHhcC-
Confidence 9999999999999999999999875321110 00000000 000000000 000 0 00000001111111110
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEE
Q 021229 196 PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI 275 (315)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i 275 (315)
.+... ................. +... .........++|+|+|+|++|.++|++.++.+++.+ ++++++++
T Consensus 161 ----~~~~~-~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~-~~~~~~~i 230 (257)
T 3c6x_A 161 ----CGPEE-YELAKMLTRKGSLFQNI-LAKR---PFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY-KPDKVYKV 230 (257)
T ss_dssp ----SCHHH-HHHHHHHCCCBCCCHHH-HHHS---CCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS-CCSEEEEC
T ss_pred ----CCHHH-HHHHHHhcCCCccchhh-hccc---cccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEe
Confidence 00000 00000000000000000 0000 000000113689999999999999999999999998 68999999
Q ss_pred cCCCCccccCChHHHHHHHHHHHhcC
Q 021229 276 KKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 276 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++||++++|+|++|++.|.+|+++.
T Consensus 231 ~~~gH~~~~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 231 EGGDHKLQLTKTKEIAEILQEVADTY 256 (257)
T ss_dssp CSCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999753
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=246.38 Aligned_cols=265 Identities=19% Similarity=0.181 Sum_probs=176.3
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhh-ccccceEEeecCCCCCCCCCCC---CCCCc
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPH-MIHYFNVYVPDLLFFGDSFTTR---PERSE 99 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~-l~~~~~vi~~D~~G~G~S~~~~---~~~~~ 99 (315)
+...++.+++| +++|+.. ++++|+|||+||++++.. .|..+++. +.++|+|+++|+||||.|.... ...+.
T Consensus 3 ~~~~~~~~~~~-~~~~~~~---~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 77 (279)
T 4g9e_A 3 INYHELETSHG-RIAVRES---EGEGAPLLMIHGNSSSGA-IFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSM 77 (279)
T ss_dssp CEEEEEEETTE-EEEEEEC---CCCEEEEEEECCTTCCGG-GGHHHHHSHHHHHEEEEEECCTTSTTSCCCSCHHHHSSH
T ss_pred eEEEEEEcCCc-eEEEEec---CCCCCeEEEECCCCCchh-HHHHHHhHHHhcCCeEEeecCCCCCCCCCCCCcccCCCH
Confidence 45667888766 6788765 245789999999999886 59999988 6677999999999999997532 23455
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
...++++.++++.++.++++|+||||||.+|+.+|.++|+ +.++|+++++........ ........ ..........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~ 153 (279)
T 4g9e_A 78 EGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVG-QGFKSGPD--MALAGQEIFS 153 (279)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHH-HHBCCSTT--GGGGGCSCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccc-hhhccchh--hhhcCccccc
Confidence 6678999999999999999999999999999999999998 889988876654332211 00000000 0000001111
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
......+....+.... .......+ ..............+...........+.++++|+|+|+|++|.++|.+..
T Consensus 154 ~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~ 227 (279)
T 4g9e_A 154 ERDVESYARSTCGEPF-----EASLLDIV-ARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFV 227 (279)
T ss_dssp HHHHHHHHHHHHCSSC-----CHHHHHHH-HHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHH
T ss_pred HHHHHHHHHhhccCcc-----cHHHHHHH-HhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHH
Confidence 1222223222222111 11111111 00000001111111111122223344678899999999999999999988
Q ss_pred HHHH-hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 260 RRLK-SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 260 ~~l~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
+.+. +.+ +++++++++++||+++.|+|+++++.|.+||++....
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 228 SKVKFGNL-WEGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp TTCCCSSB-GGGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSS
T ss_pred HHHhhccC-CCCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhh
Confidence 8887 555 6889999999999999999999999999999865443
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=243.54 Aligned_cols=242 Identities=15% Similarity=0.107 Sum_probs=153.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHHHHHHHHHcC-CCceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAECVMRVMEAHS-VKKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSm 125 (315)
+++||||||++.+.. .|..+++.|++ +|+|+++|+||||.|+... ..++...+++++.+++++++ .++++||||||
T Consensus 4 ~~~vvllHG~~~~~~-~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 82 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 82 (273)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHHhCCCEEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCCCEEEEecCH
Confidence 578999999998774 69999999965 6999999999999997532 23567778999999999997 58999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchh---hhhhhhcccchhhhhhh---ccC---CCc---hHHHHHHHhhhcc
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD---LRDRMFKVSDLEEASKI---LVP---QSP---GKLKELMRYTFFK 193 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~---~~~---~~~~~~~~~~~~~ 193 (315)
||++++.+|.++|++|+++|++++........ ................. ... ... ....+.....++.
T Consensus 83 GG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (273)
T 1xkl_A 83 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQ 162 (273)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCHHHHHHHTST
T ss_pred HHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCHHHHHHHhhc
Confidence 99999999999999999999998643211110 00000000000000000 000 000 0000011111110
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEE
Q 021229 194 RPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLI 273 (315)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~ 273 (315)
. .+.. ...+.............. +.. ......-...++|+|+|+|++|.++|++.++.+++.+ ++++++
T Consensus 163 ~-----~~~~-~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~-p~~~~~ 231 (273)
T 1xkl_A 163 L-----CSPE-DLALASSLVRPSSLFMED-LSK---AKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI-GVTEAI 231 (273)
T ss_dssp T-----SCHH-HHHHHHHHCCCBCCCHHH-HHH---CCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH-CCSEEE
T ss_pred c-----CCHH-HHHHHHHhcCCCchhhhh-hhc---ccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhC-CCCeEE
Confidence 0 0000 000000000000000000 000 0000001124689999999999999999999999988 689999
Q ss_pred EEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 274 VIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 274 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+++++||++++|+|++|++.|.+|+++..
T Consensus 232 ~i~~aGH~~~~e~P~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 232 EIKGADHMAMLCEPQKLCASLLEIAHKYN 260 (273)
T ss_dssp EETTCCSCHHHHSHHHHHHHHHHHHHHCC
T ss_pred EeCCCCCCchhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998654
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=244.60 Aligned_cols=259 Identities=15% Similarity=0.190 Sum_probs=170.7
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC----CCchhH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE----RSESFQ 102 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~ 102 (315)
.++++ +|..++|+... ++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|...... .+...+
T Consensus 11 ~~~~~-~g~~l~~~~~g----~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 84 (297)
T 2qvb_A 11 KYLEI-AGKRMAYIDEG----KGDAIVFQHGNPTSSY-LWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRYSYGEQ 84 (297)
T ss_dssp EEEEE-TTEEEEEEEES----SSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred eEEEE-CCEEEEEEecC----CCCeEEEECCCCchHH-HHHHHHHHHhhcCeEEEEcCCCCCCCCCCCCccccCcCHHHH
Confidence 45555 68889998752 3689999999999885 69999999988899999999999999765444 667778
Q ss_pred HHHHHHHHHHcCC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCc
Q 021229 103 AECVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 103 a~~~~~~l~~l~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
++++.++++.++. ++++|+||||||.+++.+|.++|++|+++|++++........ ...... .....+.....
T Consensus 85 ~~~~~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 158 (297)
T 2qvb_A 85 RDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVR------GVFQGFRSPQG 158 (297)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGH------HHHHHHTSTTH
T ss_pred HHHHHHHHHHcCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHH------HHHHHHhcccc
Confidence 9999999999999 999999999999999999999999999999998755321110 000000 00000000000
Q ss_pred hHH----HHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhhccCc-----------cccccccccCCCCe
Q 021229 181 GKL----KELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVRAIPK-----------DRKISNIDKITQPT 243 (315)
Q Consensus 181 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P~ 243 (315)
... ..++...+..... ..........+...... .........+..+.. .+....+.++++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPGAIL-RQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPK 237 (297)
T ss_dssp HHHHHTTCHHHHTHHHHTCS-SCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCE
T ss_pred hhhhccccHHHHHHHhcccc-ccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccE
Confidence 000 0001000000000 00111111111100000 000111111111110 01123456789999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+|+|++|.++|.+..+.+.+.+ ++ +++++ ++||+++.|+|+++++.|.+||++.
T Consensus 238 lii~G~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 238 LFINAEPGAIITGRIRDYVRSWP-NQ-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp EEEEEEECSSSCHHHHHHHHTSS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCHHHHHHHHHHc-CC-eEEEe-cCccchhhhCHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 57 99999 9999999999999999999999754
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=235.73 Aligned_cols=250 Identities=17% Similarity=0.160 Sum_probs=168.5
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
.++...||..++|.... ++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|.... ..+...+++++
T Consensus 5 ~~~~~~~g~~l~~~~~g----~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~S~~~~-~~~~~~~~~~~ 78 (262)
T 3r0v_A 5 QTVPSSDGTPIAFERSG----SGPPVVLVGGALSTRA-GGAPLAERLAPHFTVICYDRRGRGDSGDTP-PYAVEREIEDL 78 (262)
T ss_dssp CEEECTTSCEEEEEEEE----CSSEEEEECCTTCCGG-GGHHHHHHHTTTSEEEEECCTTSTTCCCCS-SCCHHHHHHHH
T ss_pred heEEcCCCcEEEEEEcC----CCCcEEEECCCCcChH-HHHHHHHHHhcCcEEEEEecCCCcCCCCCC-CCCHHHHHHHH
Confidence 34566689899988752 3679999999999886 599999999988999999999999997654 56677789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH-HH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL-KE 185 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 185 (315)
.+++++++ ++++|+||||||.+++.+|.++| +|+++|++++.......... .. ..........+........ ..
T Consensus 79 ~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~ 153 (262)
T 3r0v_A 79 AAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPP--VP-PDYQTRLDALLAEGRRGDAVTY 153 (262)
T ss_dssp HHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCC--CC-TTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccch--hh-hHHHHHHHHHhhccchhhHHHH
Confidence 99999999 99999999999999999999999 99999999876543321100 00 0000001111111111111 11
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHH-------HHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMC-------TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
+... ... .+......+..... ............ ........+.++++|+|+|+|++|.++|.+.
T Consensus 154 ~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 224 (262)
T 3r0v_A 154 FMTE-GVG------VPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMG--DNTIPTARFASISIPTLVMDGGASPAWIRHT 224 (262)
T ss_dssp HHHH-TSC------CCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHT--TSCCCHHHHTTCCSCEEEEECTTCCHHHHHH
T ss_pred Hhhc-ccC------CCHHHHHHHHhhhcccchHHHHhhhhhhhhhhh--cCCCCHHHcCcCCCCEEEEeecCCCCCCHHH
Confidence 1111 000 11111111110000 000000000000 1111234567899999999999999999999
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 259 ~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++.+++.+ +++++++++++|| +++|+++++.|.+||++
T Consensus 225 ~~~~~~~~-~~~~~~~~~~~gH---~~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 225 AQELADTI-PNARYVTLENQTH---TVAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHS-TTEEEEECCCSSS---SCCHHHHHHHHHHHHC-
T ss_pred HHHHHHhC-CCCeEEEecCCCc---ccCHHHHHHHHHHHHhC
Confidence 99999998 6899999999999 47999999999999963
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-34 Score=245.93 Aligned_cols=272 Identities=15% Similarity=0.224 Sum_probs=177.1
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhh-ccccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPH-MIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
+...++.+ +|..++|+... ++|+|||+||++++.. .|..+++. +.++|+|+++|+||||.|..+....+...+
T Consensus 9 ~~~~~~~~-~g~~l~~~~~g----~~~~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~~~~~~~~~ 82 (309)
T 3u1t_A 9 FAKRTVEV-EGATIAYVDEG----SGQPVLFLHGNPTSSY-LWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQDH 82 (309)
T ss_dssp CCCEEEEE-TTEEEEEEEEE----CSSEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCSSCCCHHHH
T ss_pred ccceEEEE-CCeEEEEEEcC----CCCEEEEECCCcchhh-hHHHHHHHHHhCCCEEEEEccCCCCCCCCCCcccCHHHH
Confidence 44556666 67888988752 3679999999999886 69999998 677899999999999999876656777778
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc----h-hhhhhh---hcccchhhhhhh
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE----Q-DLRDRM---FKVSDLEEASKI 174 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~----~-~~~~~~---~~~~~~~~~~~~ 174 (315)
++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++...... . ...... ............
T Consensus 83 ~~~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (309)
T 3u1t_A 83 VAYMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVGEK 162 (309)
T ss_dssp HHHHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchhhh
Confidence 99999999999999999999999999999999999999999999986543221 0 000000 000000000000
Q ss_pred ccCCCchHHHHHHHhh-hccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCcc-----------ccccccccCCC
Q 021229 175 LVPQSPGKLKELMRYT-FFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKD-----------RKISNIDKITQ 241 (315)
Q Consensus 175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~ 241 (315)
...........++... ... .........+...... .........+...... +....+.++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 237 (309)
T 3u1t_A 163 MVLDGNFFVETILPEMGVVR-----SLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPI 237 (309)
T ss_dssp HHTTTCHHHHTHHHHTSCSS-----CCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred hccccceehhhhcccccccc-----cCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCC
Confidence 0000000111111100 000 0011000110000000 0000000000100000 11233567899
Q ss_pred CeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCCCCC
Q 021229 242 PTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLP 307 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 307 (315)
|+|+|+|++|.++|.+.++.+.+.+ ++.++++++++||+++.|+|+++++.|.+||++.......
T Consensus 238 P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~~~ 302 (309)
T 3u1t_A 238 PKLLFHAEPGALAPKPVVDYLSENV-PNLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHASL 302 (309)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCCC-
T ss_pred CEEEEecCCCCCCCHHHHHHHHhhC-CCCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchhhhh
Confidence 9999999999999999999999988 6888999999999999999999999999999877655433
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-32 Score=236.87 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=172.9
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCC-CCCchhHHHHHHHHHHH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRP-ERSESFQAECVMRVMEA 112 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~ 112 (315)
..++|+...+.++++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..... ..+....++++.+++++
T Consensus 32 ~~~~~~~~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 110 (315)
T 4f0j_A 32 LSMAYLDVAPKKANGRTILLMHGKNFCAG-TWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLER 110 (315)
T ss_dssp EEEEEEEECCSSCCSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHH
T ss_pred eeEEEeecCCCCCCCCeEEEEcCCCCcch-HHHHHHHHHHHCCCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHH
Confidence 45666666554567889999999999886 699999999875 9999999999999976543 55667779999999999
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhc
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFF 192 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (315)
++.++++|+||||||.+|+.+|.++|++|+++|++++........ ..............................+.
T Consensus 111 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (315)
T 4f0j_A 111 LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKA---LGVPWRSVDDWYRRDLQTSAEGIRQYQQATYY 187 (315)
T ss_dssp TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHH---HTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTS
T ss_pred hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCccc---ccchhhhhHHHHhhcccCChHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997643221110 00000011111111112222223333222222
Q ss_pred cCCCCCCCCcchhHHHHHHHHH---HHHH-----HHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc---------
Q 021229 193 KRPPLSLVPSCLLSDYIDAMCT---EYLE-----EKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP--------- 255 (315)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~--------- 255 (315)
.... .+. ...+...... .... .................+.++++|+|+|+|++|.++|
T Consensus 188 ~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~~~~~~~~~ 262 (315)
T 4f0j_A 188 AGEW---RPE--FDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIGKDAAPAEL 262 (315)
T ss_dssp TTCC---CGG--GHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTTGGGSCHHH
T ss_pred cccc---CCc--hHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcccccccccc
Confidence 2110 000 0111110000 0000 0000001111112334577899999999999999999
Q ss_pred -------hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 256 -------LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 256 -------~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+.++.+.+.+ +++++++++++||+++.|+|+++++.|.+||++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 263 KARLGNYAQLGKDAARRI-PQATLVEFPDLGHTPQIQAPERFHQALLEGLQTQ 314 (315)
T ss_dssp HTTSCCHHHHHHHHHHHS-TTEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC-
T ss_pred ccccccchhhhhHHHhhc-CCceEEEeCCCCcchhhhCHHHHHHHHHHHhccC
Confidence 78888898888 6899999999999999999999999999999753
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=243.52 Aligned_cols=262 Identities=16% Similarity=0.230 Sum_probs=171.7
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC----CCchhHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE----RSESFQA 103 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~a 103 (315)
.+++ +|..++|.... ++|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|..+... .+...++
T Consensus 13 ~~~~-~g~~l~~~~~g----~~~~vv~lHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 86 (302)
T 1mj5_A 13 FIEI-KGRRMAYIDEG----TGDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 86 (302)
T ss_dssp EEEE-TTEEEEEEEES----CSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHHH
T ss_pred EEEE-CCEEEEEEEcC----CCCEEEEECCCCCchh-hhHHHHHHhccCCeEEEEcCCCCCCCCCCCCCCcccccHHHHH
Confidence 3444 68888988752 3689999999999885 69999999998899999999999999765443 5677789
Q ss_pred HHHHHHHHHcCC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcc-cchhhh-hhhccCCC
Q 021229 104 ECVMRVMEAHSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKV-SDLEEA-SKILVPQS 179 (315)
Q Consensus 104 ~~~~~~l~~l~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~ 179 (315)
+++.++++.++. ++++|+||||||.+|+.+|.++|++|+++|++++........ ........ ...... ........
T Consensus 87 ~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T 1mj5_A 87 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQD 166 (302)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTTT
T ss_pred HHHHHHHHHhCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhhcCh
Confidence 999999999999 999999999999999999999999999999998765321110 00000000 000000 00000000
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhhccCc-----------cccccccccCCCCeEEE
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVRAIPK-----------DRKISNIDKITQPTLIL 246 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P~lvi 246 (315)
...+...+...... .........+...... .........+..+.. .+....+.++++|+|+|
T Consensus 167 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 241 (302)
T 1mj5_A 167 NVFVEQVLPGLILR-----PLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFI 241 (302)
T ss_dssp CHHHHTHHHHTSSS-----CCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHhcCcc-----cCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEE
Confidence 01111111100000 0111111111100000 001111111111110 01133467889999999
Q ss_pred EeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 247 WGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
+|++|.++|++..+.+.+.+ ++ +++++ ++||+++.|+|+++++.|.+|+++...
T Consensus 242 ~g~~D~~~~~~~~~~~~~~~-~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 295 (302)
T 1mj5_A 242 NAEPGALTTGRMRDFCRTWP-NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRP 295 (302)
T ss_dssp EEEECSSSSHHHHHHHTTCS-SE-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred EeCCCCCCChHHHHHHHHhc-CC-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhcc
Confidence 99999999999999999888 57 99999 999999999999999999999986544
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=241.90 Aligned_cols=247 Identities=20% Similarity=0.286 Sum_probs=165.2
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCC---C-CCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP---E-RSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~---~-~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
+|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|..... . .+....++++.++++.++.++++|+|||
T Consensus 28 ~~~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S 106 (282)
T 3qvm_A 28 EKTVLLAHGFGCDQN-MWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHS 106 (282)
T ss_dssp SCEEEEECCTTCCGG-GGTTTHHHHHTTSEEEECCCTTSTTSCGGGCCTTGGGSHHHHHHHHHHHHHHTTCCSEEEEEET
T ss_pred CCeEEEECCCCCCcc-hHHHHHHHHhcCceEEEEecCCCCCCCCCCCCccccccHHHHHHHHHHHHHHcCCCceEEEEec
Confidence 479999999999886 6999999999899999999999999975431 2 2556678899999999999999999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
|||.+|+.+|.++|++|+++|++++........ ................... .....+...+........ ....
T Consensus 107 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~ 181 (282)
T 3qvm_A 107 VSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMD-KNYIGWANYLAPLVMGAS----HSSE 181 (282)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHH-HCHHHHHHHHHHHHHCTT----SCHH
T ss_pred ccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHh-cchhhHHHHHHhhccCCc----cchh
Confidence 999999999999999999999998765432210 0000000000000000000 001111111111111111 1111
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~ 283 (315)
....+......................+....+.++++|+|+|+|++|.++|.+.++.+.+.+ +++++++++++||+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 260 (282)
T 3qvm_A 182 LIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENI-PNSQLELIQAEGHCLH 260 (282)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHS-SSEEEEEEEEESSCHH
T ss_pred hHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhC-CCCcEEEecCCCCccc
Confidence 112221111111111111122221222234567789999999999999999999999999998 6899999999999999
Q ss_pred cCChHHHHHHHHHHHhcCC
Q 021229 284 YEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~~~ 302 (315)
.|+|+++++.|.+||++..
T Consensus 261 ~~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 261 MTDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp HHCHHHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHHHhcC
Confidence 9999999999999998754
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=236.05 Aligned_cols=257 Identities=12% Similarity=0.085 Sum_probs=166.1
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHh-----hHhhccccceEEeecCCCCCCCCCCCC-C---CC
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTN-----IIPHMIHYFNVYVPDLLFFGDSFTTRP-E---RS 98 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~-----~~~~l~~~~~vi~~D~~G~G~S~~~~~-~---~~ 98 (315)
++.+ +|.+++|....+.++++|+|||+||++++....|.. +++.|+++|+|+++|+||||.|....+ . ++
T Consensus 15 ~~~~-~~~~l~y~~~G~~~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~s~~~~~~~~~~~~ 93 (286)
T 2qmq_A 15 SVET-PYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPS 93 (286)
T ss_dssp EEEE-TTEEEEEEEESCCCTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHTTSCEEEEECTTTSTTCCCCCTTCCCCC
T ss_pred cccc-CCeEEEEEeccCCCCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhcCCCEEEecCCCCCCCCCCCCCCCCccC
Confidence 4444 578899988643222578999999999887522554 788888889999999999998865422 2 26
Q ss_pred chhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 99 ESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 99 ~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
...+++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++....... ...... ......
T Consensus 94 ~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~------~~~~~~-- 163 (286)
T 2qmq_A 94 LDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGW--MDWAAH------KLTGLT-- 163 (286)
T ss_dssp HHHHHHTHHHHHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCH--HHHHHH------HHHHTT--
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccch--hhhhhh------hhcccc--
Confidence 6677899999999999999999999999999999999999999999999875533221 000000 000000
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHH----HHHHHHHhhhccCccc-cccccccCCCCeEEEEeCCCCC
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE----YLEEKRELVRAIPKDR-KISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
...........+..... .........+....... ........+....... ....+.++++|+|+|+|++|.+
T Consensus 164 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 240 (286)
T 2qmq_A 164 -SSIPDMILGHLFSQEEL--SGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPH 240 (286)
T ss_dssp -SCHHHHHHHHHSCHHHH--HTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTT
T ss_pred -ccchHHHHHHHhcCCCC--CcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcc
Confidence 00001111101100000 00001111111111100 0011111111111111 1345678999999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+| ...+.+.+..++++++++++++||+++.|+|+++++.|.+||+
T Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 241 ED-AVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HH-HHHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred cc-HHHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 98 4566666666337999999999999999999999999999996
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=242.46 Aligned_cols=226 Identities=17% Similarity=0.249 Sum_probs=152.8
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc--CCCceEEEEEc
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH--SVKKLSLVGLS 124 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l--~~~~v~lvGhS 124 (315)
+++.||||||++++.. .|..+++.|++. |+|+++|+||||.|.......+...+++++.++++.+ +.++++|+|||
T Consensus 50 ~~~~VlllHG~~~s~~-~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~~~~~~~~~~~d~~~~~~~l~~~~~~v~lvG~S 128 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQ-SMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERCDVLFMTGLS 128 (281)
T ss_dssp SSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTSSSCHHHHHTCCHHHHHHHHHHHHHHHHHHCSEEEEEEET
T ss_pred CCceEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEECCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEEEEEEC
Confidence 4557999999999885 699999999875 9999999999999964333445555677788888776 57899999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcch
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (315)
|||.+|+.+|.++|++|+++|+++++............+... .... .+.....+ .............+...
T Consensus 129 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~ 199 (281)
T 4fbl_A 129 MGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPD----APAE-LPGIGSDI----KAEGVKELAYPVTPVPA 199 (281)
T ss_dssp HHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTT----CCSE-EECCCCCC----SSTTCCCCCCSEEEGGG
T ss_pred cchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHh----hHHh-hhcchhhh----hhHHHHHhhhccCchHH
Confidence 999999999999999999999998776544332111100000 0000 00000000 00000000000001111
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFN 283 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~ 283 (315)
..++.. +. .. ....+++|++|+|+|+|++|.++|++.++.+++.++ +++++++++++||.++
T Consensus 200 ~~~~~~-~~--------~~--------~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~~~~l~~~~~~gH~~~ 262 (281)
T 4fbl_A 200 IKHLIT-IG--------AV--------AEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVAT 262 (281)
T ss_dssp HHHHHH-HH--------HH--------HHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCSSEEEEEESSCCSCGG
T ss_pred HHHHHH-hh--------hh--------ccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCCCcEEEEECCCCCcCc
Confidence 111110 00 00 112467899999999999999999999999998884 3568999999999998
Q ss_pred cCC-hHHHHHHHHHHHhc
Q 021229 284 YEK-PKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e~-p~~~~~~i~~fl~~ 300 (315)
.|+ |+++++.|.+||++
T Consensus 263 ~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 263 LDNDKELILERSLAFIRK 280 (281)
T ss_dssp GSTTHHHHHHHHHHHHHT
T ss_pred cccCHHHHHHHHHHHHHh
Confidence 875 89999999999985
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-33 Score=232.62 Aligned_cols=224 Identities=16% Similarity=0.255 Sum_probs=147.0
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHH---HHHHHHHHHcCCCceEEEEEc
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQA---ECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a---~~~~~~l~~l~~~~v~lvGhS 124 (315)
+++||||||++++.. .|..+++.|.+ +|+|+++|+||||.|......++...++ .++.++++++++++++|+|||
T Consensus 16 ~~~vvllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~lvG~S 94 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGLS 94 (247)
T ss_dssp SCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEET
T ss_pred CcEEEEECCCCCChH-HHHHHHHHHHHCCCEEEecccCCCCCCHHHhcCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 578999999999886 59999999975 5999999999999764221223443333 344567788899999999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
|||.+|+.+|.++| |+++|+++++....... ......... .... ............... .+... +..
T Consensus 95 mGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~-~~~~~------~~~ 162 (247)
T 1tqh_A 95 LGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYA--REYK-KREGKSEEQIEQEME-KFKQT------PMK 162 (247)
T ss_dssp HHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHH--HHHH-HHHTCCHHHHHHHHH-HHTTS------CCT
T ss_pred HHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHH--HHhh-cccccchHHHHhhhh-cccCC------CHH
Confidence 99999999999999 99999876544321111 000000000 0000 000011111111111 01000 000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC-CcEEEEEcCCCCcc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD-NAQLIVIKKAGHAF 282 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~ 282 (315)
....+. ... .+....++++++|+|+|+|++|.++|++.++.+++.++. ++++++++++||++
T Consensus 163 ~~~~~~------------~~~-----~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 225 (247)
T 1tqh_A 163 TLKALQ------------ELI-----ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVI 225 (247)
T ss_dssp THHHHH------------HHH-----HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSSG
T ss_pred HHHHHH------------HHH-----HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCCceEEEEeCCCceee
Confidence 000100 000 012235678999999999999999999999999998842 36999999999999
Q ss_pred ccCC-hHHHHHHHHHHHhcCC
Q 021229 283 NYEK-PKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 283 ~~e~-p~~~~~~i~~fl~~~~ 302 (315)
+.|+ |++|++.|.+||++..
T Consensus 226 ~~e~~~~~~~~~i~~Fl~~~~ 246 (247)
T 1tqh_A 226 TLDQEKDQLHEDIYAFLESLD 246 (247)
T ss_dssp GGSTTHHHHHHHHHHHHHHSC
T ss_pred ccCccHHHHHHHHHHHHHhcc
Confidence 9986 7999999999998653
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=235.93 Aligned_cols=270 Identities=17% Similarity=0.190 Sum_probs=161.9
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCC--CCCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTR--PERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~--~~~~~ 99 (315)
++...++++.||..++|.... ++++++||||||++++.. |......+ .++|+|+++|+||||.|.... ..++.
T Consensus 13 ~~~~~~~~~~~g~~l~~~~~g--~~~g~~vvllHG~~~~~~--~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 88 (317)
T 1wm1_A 13 AYDSGWLDTGDGHRIYWELSG--NPNGKPAVFIHGGPGGGI--SPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTT 88 (317)
T ss_dssp CSEEEEEECSSSCEEEEEEEE--CTTSEEEEEECCTTTCCC--CGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSH
T ss_pred cceeeEEEcCCCcEEEEEEcC--CCCCCcEEEECCCCCccc--chhhhhhccccCCeEEEECCCCCCCCCCCcccccccH
Confidence 345567788789889987752 334578999999876542 22223334 356999999999999997532 23456
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhh--hhcc-cc-hhhhhhh
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDR--MFKV-SD-LEEASKI 174 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~--~~~~-~~-~~~~~~~ 174 (315)
..+++++.++++++++++++|+||||||.||+.+|.++|++|+++|++++........ .... .... .. .......
T Consensus 89 ~~~~~dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (317)
T 1wm1_A 89 WHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 168 (317)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhh
Confidence 6678999999999999999999999999999999999999999999987543211000 0000 0000 00 0000000
Q ss_pred ----------------ccCCCchHHHHHHHh--hhccCCCCCCCCcc----hh-HHHHHHHHHHHHHHHHHhhhccCc-c
Q 021229 175 ----------------LVPQSPGKLKELMRY--TFFKRPPLSLVPSC----LL-SDYIDAMCTEYLEEKRELVRAIPK-D 230 (315)
Q Consensus 175 ----------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (315)
+.............. .+..... ...+.. +. ..+...... ..........+.. .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 245 (317)
T 1wm1_A 169 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETV-TLLPSRESASFGEDDFALAFAR--IENHYFTHLGFLESD 245 (317)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTS-SSSCCGGGGGGGCHHHHHHHHH--HHHHHHHTGGGCSST
T ss_pred ccchhhcchHHHHHhhhcCCCccccccccccccccccchh-hccCCcccccccccchhhhHHH--hhhhhhhcccccccc
Confidence 000000000000000 0000000 000000 00 010000000 0000000011111 1
Q ss_pred c-cccccccCC-CCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC-ChHHHHHHHHHHHhc
Q 021229 231 R-KISNIDKIT-QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE-KPKEFYKHLKSFLLD 300 (315)
Q Consensus 231 ~-~~~~l~~i~-~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 300 (315)
. ....+.+++ +|+|+|+|++|.++|++.++.+++.+ +++++++++++||+++.+ .++++.+.|.+|+.+
T Consensus 246 ~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~-p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~~ 317 (317)
T 1wm1_A 246 DQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSYDEPGILHQLMIATDRFAGK 317 (317)
T ss_dssp THHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC-
T ss_pred hhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhC-CCceEEEECCCCCCCCCcchHHHHHHHHHHHhcC
Confidence 1 234566785 99999999999999999999999998 689999999999999765 588999999999863
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=238.60 Aligned_cols=253 Identities=18% Similarity=0.210 Sum_probs=170.2
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCC-CCCCCCCCCCCchhH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFF-GDSFTTRPERSESFQ 102 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~ 102 (315)
.+..++.+++ ..++++.. +++++++|||+||++++.. .|..+++.|.++|+|+++|+||| |.|.......+...+
T Consensus 45 ~~~~~v~~~~-~~~~~~~~--g~~~~~~vv~lHG~~~~~~-~~~~~~~~L~~g~~vi~~D~~G~gG~s~~~~~~~~~~~~ 120 (306)
T 2r11_A 45 CKSFYISTRF-GQTHVIAS--GPEDAPPLVLLHGALFSST-MWYPNIADWSSKYRTYAVDIIGDKNKSIPENVSGTRTDY 120 (306)
T ss_dssp CEEEEECCTT-EEEEEEEE--SCTTSCEEEEECCTTTCGG-GGTTTHHHHHHHSEEEEECCTTSSSSCEECSCCCCHHHH
T ss_pred cceEEEecCC-ceEEEEee--CCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCCCHHHH
Confidence 3455666654 46788775 3445789999999998886 59999999988999999999999 888765556667778
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++......... .... ....... ..
T Consensus 121 ~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~-----~~~~~~~----~~ 189 (306)
T 2r11_A 121 ANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHH--DFYK-----YALGLTA----SN 189 (306)
T ss_dssp HHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCH--HHHH-----HHHTTTS----TT
T ss_pred HHHHHHHHHhcCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccH--HHHH-----HHhHHHH----HH
Confidence 99999999999999999999999999999999999999999999987654322110 0000 0000000 01
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccC-------ccccccccccCCCCeEEEEeCCCCCCc
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIP-------KDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
....+...+..... ... .+...... ........+..+. .......+.++++|+|+|+|++|.++|
T Consensus 190 ~~~~~~~~~~~~~~---~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 261 (306)
T 2r11_A 190 GVETFLNWMMNDQN---VLH----PIFVKQFK-AGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYD 261 (306)
T ss_dssp HHHHHHHHHTTTCC---CSC----HHHHHHHH-HHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSC
T ss_pred HHHHHHHHhhCCcc---ccc----cccccccH-HHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccC
Confidence 11111111111100 010 11100000 0000000000000 001223456889999999999999999
Q ss_pred hHHHHHHH-hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 256 LELGRRLK-SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 256 ~~~~~~l~-~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+..+.+. +.+ +++++++++++||+++.|+|+++++.|.+||++
T Consensus 262 ~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 262 PHSALHRASSFV-PDIEAEVIKNAGHVLSMEQPTYVNERVMRFFNA 306 (306)
T ss_dssp HHHHHHHHHHHS-TTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHC-CCCEEEEeCCCCCCCcccCHHHHHHHHHHHHhC
Confidence 88877554 455 789999999999999999999999999999963
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=237.13 Aligned_cols=237 Identities=17% Similarity=0.254 Sum_probs=143.8
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCc--eEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKK--LSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~--v~lvGhSm 125 (315)
+|+||||||++++.. .|.++++.|. ++|+|+++|+||||.|.... ..+...+++++.+++++++.++ ++|+||||
T Consensus 16 ~~~vvllHG~~~~~~-~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~~-~~~~~~~a~~l~~~l~~l~~~~~p~~lvGhSm 93 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERH-CDNFAEAVEMIEQTVQAHVTSEVPVILVGYSL 93 (264)
T ss_dssp BCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC--------CHHHHHHHHHHHTTCCTTSEEEEEEETH
T ss_pred CCcEEEEcCCCCCHH-HHHHHHHHhcccCceEEEecCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhCcCCCceEEEEECH
Confidence 378999999999885 6999999998 78999999999999997532 2455667899999999999877 99999999
Q ss_pred hHHHHHH---HHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 126 GGFVGYS---MAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 126 GG~ia~~---~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||.+|+. +|.++|++|+++|++++.......... . ............+.... ........+ ..........
T Consensus 94 GG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~ 167 (264)
T 1r3d_A 94 GGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEK-A-ARWQHDQQWAQRFSQQP---IEHVLSDWY-QQAVFSSLNH 167 (264)
T ss_dssp HHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHH-H-HHHHHHHHHHHHHHHSC---HHHHHHHHT-TSGGGTTCCH
T ss_pred hHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhh-h-hhhcccHHHHHHhcccc---HHHHHHHHh-hhhhhhccCH
Confidence 9999999 888999999999998765433221100 0 00000000000000000 011111100 0000000011
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccC---ccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCC
Q 021229 203 CLLSDYIDAMCTEYLEEKRELVRAIP---KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~g 279 (315)
.....+...............+.... .......+.++++|+|+|+|++|..++ .+.+.+ + .++++++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~-~-~~~~~i~~~g 240 (264)
T 1r3d_A 168 EQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS-G-LSYSQVAQAG 240 (264)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH-C-SEEEEETTCC
T ss_pred HHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh-C-CcEEEcCCCC
Confidence 11111111110000000111111110 111233567899999999999998653 233334 2 6799999999
Q ss_pred CccccCChHHHHHHHHHHHhc
Q 021229 280 HAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 280 H~~~~e~p~~~~~~i~~fl~~ 300 (315)
|++++|+|++|++.|.+|+++
T Consensus 241 H~~~~e~p~~~~~~i~~fl~~ 261 (264)
T 1r3d_A 241 HNVHHEQPQAFAKIVQAMIHS 261 (264)
T ss_dssp SCHHHHCHHHHHHHHHHHHHH
T ss_pred CchhhcCHHHHHHHHHHHHHH
Confidence 999999999999999999975
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-33 Score=233.36 Aligned_cols=240 Identities=15% Similarity=0.174 Sum_probs=156.1
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCC-CCCchhHHHHHHHHHHHcCC-CceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRP-ERSESFQAECVMRVMEAHSV-KKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~l~~-~~v~lvGhSm 125 (315)
+|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..+.. ..+...+++++.+++++++. ++++|+||||
T Consensus 4 g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~ 82 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAW-IWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIETLKSLPENEEVILVGFSF 82 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSSCGGGCCSHHHHHHHHHHHHHTSCTTCCEEEEEETT
T ss_pred CCcEEEECCCCCccc-cHHHHHHHHHhCCCEEEEecCCCCcCCCCCCCccccHHHhHHHHHHHHHHhcccCceEEEEeCh
Confidence 479999999999886 699999999876 9999999999999976432 35677789999999999998 9999999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccc-hhhhhhh-cc----CC----CchHHHHHHHhhhccCC
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD-LEEASKI-LV----PQ----SPGKLKELMRYTFFKRP 195 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~----~~----~~~~~~~~~~~~~~~~~ 195 (315)
||.+++.+|.++|++|+++|++++.................. ....... .. .. ........+...++..
T Consensus 83 Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (258)
T 3dqz_A 83 GGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQN- 161 (258)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTT-
T ss_pred hHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHHHHHhhcc-
Confidence 999999999999999999999987543322110000000000 0000000 00 00 0000001111111111
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEE
Q 021229 196 PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI 275 (315)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i 275 (315)
.+.... .......... ......+............++|+++|+|++|.++|++..+.+++.+ ++++++++
T Consensus 162 ----~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~ 231 (258)
T 3dqz_A 162 ----CPIEDY-ELAKMLHRQG----SFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNF-NVSKVYEI 231 (258)
T ss_dssp ----SCHHHH-HHHHHHCCCE----ECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHS-CCSCEEEE
T ss_pred ----CCHHHH-HHHHHhccCC----chhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhC-CcccEEEc
Confidence 000000 0000000000 0000000000111122234799999999999999999999999998 68899999
Q ss_pred cCCCCccccCChHHHHHHHHHHHhc
Q 021229 276 KKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 276 ~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++||+++.|+|+++++.|.+|+++
T Consensus 232 ~~~gH~~~~~~p~~~~~~i~~fl~~ 256 (258)
T 3dqz_A 232 DGGDHMVMLSKPQKLFDSLSAIATD 256 (258)
T ss_dssp TTCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCCchhhcChHHHHHHHHHHHHH
Confidence 9999999999999999999999986
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=242.82 Aligned_cols=272 Identities=18% Similarity=0.171 Sum_probs=170.2
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC--CCCchhHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP--ERSESFQA 103 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~a 103 (315)
.++++ +|.+++|+...+.++++|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|..... .++....+
T Consensus 6 ~~~~~-~g~~l~y~~~G~~~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~~~~~~~~~~~~ 83 (356)
T 2e3j_A 6 RILNC-RGTRIHAVADSPPDQQGPLVVLLHGFPESWY-SWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELV 83 (356)
T ss_dssp EEEEE-TTEEEEEEEECCTTCCSCEEEEECCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCCCCSGGGGSHHHHH
T ss_pred EEEcc-CCeEEEEEEecCCCCCCCEEEEECCCCCcHH-HHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCcccccCHHHHH
Confidence 34554 6888999886432235789999999998885 69999999976 59999999999999975432 34556678
Q ss_pred HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc----------cCc-hhhhhhhhccc-----c
Q 021229 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC----------LEE-QDLRDRMFKVS-----D 167 (315)
Q Consensus 104 ~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~----------~~~-~~~~~~~~~~~-----~ 167 (315)
+++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++++.. ... ........... .
T Consensus 84 ~~~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (356)
T 2e3j_A 84 GDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVW 163 (356)
T ss_dssp HHHHHHHHHTTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCGGGSSCCSSCSSCCSCHHHHHHSSSCSSEEE
T ss_pred HHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcccccccccCCCCCcccccchHHHHHhhcCCcHH
Confidence 9999999999999999999999999999999999999999999986541 100 00000000000 0
Q ss_pred hhh-h-----hhhccCCCc-hHHHHHHHhh----------------------------------------hcc----C-C
Q 021229 168 LEE-A-----SKILVPQSP-GKLKELMRYT----------------------------------------FFK----R-P 195 (315)
Q Consensus 168 ~~~-~-----~~~~~~~~~-~~~~~~~~~~----------------------------------------~~~----~-~ 195 (315)
... . ......... ..+..++... +.. . .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (356)
T 2e3j_A 164 YQDYFAVQDGIITEIEEDLRGWLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAEGARLKDAFVYPET 243 (356)
T ss_dssp HHHHHHHCSHHHHHHHTTHHHHHHHHHHHTSHHHHHHHHHCCC-------CCCGGGTSTTSTTEEETTSCGGGGCCCCSS
T ss_pred HHHHHhcccchHHHHHHhHHHHHHHHhhccccchhhccchhhcccccccccccccccccccccccccchhhhhccccccc
Confidence 000 0 000000000 0111111100 000 0 0
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcc-c--cccccccCCCCeEEEEeCCCCCCch--HHHHHHHhhcCCCc
Q 021229 196 PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKD-R--KISNIDKITQPTLILWGEHDQIFPL--ELGRRLKSHLGDNA 270 (315)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~i~~P~lvi~G~~D~~~~~--~~~~~l~~~~~~~~ 270 (315)
...+........+...............+..+... . ....+.++++|+|+|+|++|.++|. +.++.+.+.+ +++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~p~~~~~~~~l~~~~-p~~ 322 (356)
T 2e3j_A 244 MPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQYDVGTIWGAQAIERAHEVM-PNY 322 (356)
T ss_dssp CCTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTSCCCSCEEEEEETTCHHHHHTHHHHHTHHHHC-TTE
T ss_pred ccccCCHHHHHHHHHHhcccCCchhHHHHHhcccChhhhHhhcCCccCCCEEEEecCCCccccccHHHHHHHHHhC-cCc
Confidence 00001111111111111100000000111110000 0 0113468999999999999999984 8889999988 688
Q ss_pred -EEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 271 -QLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 271 -~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++++++++||+++.|+|++|++.|.+||++.
T Consensus 323 ~~~~~i~~aGH~~~~e~p~~~~~~i~~fl~~~ 354 (356)
T 2e3j_A 323 RGTHMIADVGHWIQQEAPEETNRLLLDFLGGL 354 (356)
T ss_dssp EEEEEESSCCSCHHHHSHHHHHHHHHHHHHTS
T ss_pred ceEEEecCcCcccchhCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999864
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=236.18 Aligned_cols=257 Identities=15% Similarity=0.168 Sum_probs=172.8
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
....+.+ +|..++|.... .+|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|.......+...+++
T Consensus 49 ~~~~~~~-~~~~~~~~~~g----~~p~vv~lhG~~~~~~-~~~~~~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 122 (314)
T 3kxp_A 49 ISRRVDI-GRITLNVREKG----SGPLMLFFHGITSNSA-VFEPLMIRLSDRFTTIAVDQRGHGLSDKPETGYEANDYAD 122 (314)
T ss_dssp EEEEEEC-SSCEEEEEEEC----CSSEEEEECCTTCCGG-GGHHHHHTTTTTSEEEEECCTTSTTSCCCSSCCSHHHHHH
T ss_pred ceeeEEE-CCEEEEEEecC----CCCEEEEECCCCCCHH-HHHHHHHHHHcCCeEEEEeCCCcCCCCCCCCCCCHHHHHH
Confidence 4445555 56778887652 3779999999998885 6999999999899999999999999985556667777899
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHH
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++.......... ....... . ............
T Consensus 123 dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~---~-~~~~~~~~~~~~ 197 (314)
T 3kxp_A 123 DIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALD-ALEARVN---A-GSQLFEDIKAVE 197 (314)
T ss_dssp HHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHH-HHHHHTT---T-TCSCBSSHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhh-HHHHHhh---h-chhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999876543322110 0000000 0 000000011111
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHH---------HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE---------YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
..+...+.. .+......+....... ........... ........+.++++|+|+|+|++|.++|
T Consensus 198 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~P~Lii~G~~D~~~~ 270 (314)
T 3kxp_A 198 AYLAGRYPN------IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARG-LRSDLVPAYRDVTKPVLIVRGESSKLVS 270 (314)
T ss_dssp HHHHHHSTT------SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHH-TTSCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred HHHHhhccc------CchHHHHHHhhhhhcccccccccccChhhhhhhccc-cCcchhhHhhcCCCCEEEEecCCCccCC
Confidence 111111000 0000000000000000 00000000000 0112233456799999999999999999
Q ss_pred hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 256 LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 256 ~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.++.+.+.+ +++++++++++||+++.|+|+++++.|.+||++
T Consensus 271 ~~~~~~~~~~~-~~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 271 AAALAKTSRLR-PDLPVVVVPGADHYVNEVSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHHHHHHC-TTSCEEEETTCCSCHHHHCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCceEEEcCCCCCcchhhCHHHHHHHHHHHHhC
Confidence 99999999998 689999999999999999999999999999974
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-32 Score=232.50 Aligned_cols=259 Identities=15% Similarity=0.221 Sum_probs=169.0
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCC--CCCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTR--PERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~--~~~~~ 99 (315)
+|++.++.+ +|..++|+... ++++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|.... ...+.
T Consensus 3 ~~~~~~~~~-~g~~l~~~~~g--~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~ 78 (286)
T 3qit_A 3 AMEEKFLEF-GGNQICLCSWG--SPEHPVVLCIHGILEQGL-AWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSS 78 (286)
T ss_dssp CCEEEEEEE-TTEEEEEEEES--CTTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSGGGCSH
T ss_pred hhhhheeec-CCceEEEeecC--CCCCCEEEEECCCCcccc-hHHHHHHHhhhcCeEEEEECCCCCCCCCCCCCCCCcCH
Confidence 466667776 57788998863 456789999999999886 599999999877 999999999999997654 45566
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC-
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ- 178 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 178 (315)
...++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.............. .+..........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 155 (286)
T 3qit_A 79 LTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVN---QLTTCLDYLSSTP 155 (286)
T ss_dssp HHHHHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHH---HHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhH---HHHHHHHHHhccc
Confidence 6778999999999999999999999999999999999999999999998765443221000000 000000000000
Q ss_pred ----Cch--HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHH------------HHHHHHhhhcc--Ccccccccccc
Q 021229 179 ----SPG--KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY------------LEEKRELVRAI--PKDRKISNIDK 238 (315)
Q Consensus 179 ----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~--~~~~~~~~l~~ 238 (315)
... ......... .. . ........+........ ..........+ ........+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T 3qit_A 156 QHPIFPDVATAASRLRQA-IP--S---LSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKS 229 (286)
T ss_dssp CCCCBSSHHHHHHHHHHH-ST--T---SCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHH
T ss_pred cccccccHHHHHHHhhcC-Cc--c---cCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhc
Confidence 000 000000000 00 0 00000000000000000 00000000000 00011223467
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHH
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKS 296 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 296 (315)
+++|+++|+|++|.++|.+..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+
T Consensus 230 i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 230 IQVPTTLVYGDSSKLNRPEDLQQQKMTM-TQAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp CCSCEEEEEETTCCSSCHHHHHHHHHHS-TTSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred cCCCeEEEEeCCCcccCHHHHHHHHHHC-CCCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 8999999999999999999999999988 6899999999 999999999999998864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=234.77 Aligned_cols=237 Identities=19% Similarity=0.162 Sum_probs=157.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC-CCCchhHHHHHHHHHHHcC-CCceEEEE
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP-ERSESFQAECVMRVMEAHS-VKKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~~l~~l~-~~~v~lvG 122 (315)
+.++|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|..... .++...+++++.+++++++ .++++|+|
T Consensus 9 ~~~~~~vvllHG~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 87 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHGAW-CWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEFMASLPANEKIILVG 87 (267)
T ss_dssp -CCCCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHTSCTTSCEEEEE
T ss_pred CCCCCeEEEECCCCCCcc-hHHHHHHHHHhcCCeEEEeccccCCCCCCcCCccCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 345789999999998886 69999999987 49999999999999976533 3567778999999999994 89999999
Q ss_pred EchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc--cchhhhhhhcc-------CCCc-hHHHHHHHhhhc
Q 021229 123 LSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV--SDLEEASKILV-------PQSP-GKLKELMRYTFF 192 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~ 192 (315)
|||||.+++.+|.++|++|+++|++++................ .........+. .... ....+.+...++
T Consensus 88 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (267)
T 3sty_A 88 HALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVY 167 (267)
T ss_dssp ETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECCHHHHHHHTS
T ss_pred EcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhhHHHHHHhhc
Confidence 9999999999999999999999999876543321111000000 00000000000 0000 000011111111
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc--------cCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 193 KRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA--------IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
.. .+. +.... ....... +............++|+++|+|++|.++|++..+.+.+
T Consensus 168 ~~-----~~~----~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 230 (267)
T 3sty_A 168 HL-----SPI----EDLAL--------ATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIE 230 (267)
T ss_dssp TT-----SCH----HHHHH--------HHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHH
T ss_pred cc-----CCH----HHHHH--------HHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHH
Confidence 11 000 00000 0000000 00000111112236999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+ +++++++++++||+++.|+|+++++.|.+|+++.
T Consensus 231 ~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 231 KN-PPDEVKEIEGSDHVTMMSKPQQLFTTLLSIANKY 266 (267)
T ss_dssp HS-CCSEEEECTTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred hC-CCceEEEeCCCCccccccChHHHHHHHHHHHHhc
Confidence 98 6899999999999999999999999999999863
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-33 Score=237.86 Aligned_cols=256 Identities=18% Similarity=0.235 Sum_probs=168.3
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHH-hhHhhc-cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWT-NIIPHM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~-~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
+|..++|... +++|+|||+||++++.. .|. .+++.+ .++|+|+++|+||||.|... ...+....++++.+++
T Consensus 31 ~~~~l~y~~~----g~~~~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~-~~~~~~~~~~~~~~~l 104 (293)
T 3hss_A 31 RVINLAYDDN----GTGDPVVFIAGRGGAGR-TWHPHQVPAFLAAGYRCITFDNRGIGATENA-EGFTTQTMVADTAALI 104 (293)
T ss_dssp CEEEEEEEEE----CSSEEEEEECCTTCCGG-GGTTTTHHHHHHTTEEEEEECCTTSGGGTTC-CSCCHHHHHHHHHHHH
T ss_pred ccceEEEEEc----CCCCEEEEECCCCCchh-hcchhhhhhHhhcCCeEEEEccCCCCCCCCc-ccCCHHHHHHHHHHHH
Confidence 5667888764 25679999999999885 588 577776 56799999999999988643 3456677799999999
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhh
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT 190 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
+.++.++++|+||||||.+|+.+|.++|++|+++|++++........ ..... .......... ..+..........
T Consensus 105 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~ 179 (293)
T 3hss_A 105 ETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRAR--QFFNK--AEAELYDSGV-QLPPTYDARARLL 179 (293)
T ss_dssp HHHTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHH--HHHHH--HHHHHHHHTC-CCCHHHHHHHHHH
T ss_pred HhcCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhh--hHHHH--HHHHHHhhcc-cchhhHHHHHHHh
Confidence 99999999999999999999999999999999999998765433211 00000 0000000000 0000110000000
Q ss_pred -hccCCCCCCCCcchhHHHHHHHHHH---HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc
Q 021229 191 -FFKRPPLSLVPSCLLSDYIDAMCTE---YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL 266 (315)
Q Consensus 191 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~ 266 (315)
...... .........+....... ....................+.++++|+|+|+|++|.++|.+.++.+.+.+
T Consensus 180 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 257 (293)
T 3hss_A 180 ENFSRKT--LNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADAL 257 (293)
T ss_dssp HHSCHHH--HTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred hhccccc--ccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHC
Confidence 000000 00000001110000000 000011111112222234456789999999999999999999999999998
Q ss_pred CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 267 GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 267 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+++++++++++||+++.|+|+++++.|.+||++..
T Consensus 258 -~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~ 292 (293)
T 3hss_A 258 -PNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK 292 (293)
T ss_dssp -TTEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTCC
T ss_pred -CCceEEEeCCCcchHhhhCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999998653
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-33 Score=232.74 Aligned_cols=230 Identities=19% Similarity=0.271 Sum_probs=159.3
Q ss_pred CCceEEEEEecCCC--CCCCcEEEEccCCCC--hhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHH
Q 021229 33 DGSVMHCWVPKTRN--DSKPDLVLIHGLGAN--ALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107 (315)
Q Consensus 33 ~g~~~~~~~~~~~~--~~~~~vvllHG~~~~--~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~ 107 (315)
+|.+++++...+.+ +++|+|||+||++++ .. .|..+++.|.+ +|+|+++|+||||.|.......+....++++.
T Consensus 9 ~g~~l~~~~~~p~~~~~~~p~vvl~HG~~~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~d~~ 87 (251)
T 2wtm_A 9 DGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEER-HIVAVQETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNIL 87 (251)
T ss_dssp TTEEEEEEEECCTTCCSSEEEEEEECCTTCCTTSH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCHHHHHHHHH
T ss_pred CCcEEEEEEEccCCCCCCCCEEEEEcCCCcccccc-cHHHHHHHHHHCCCEEEEecCCCCCCCCCccccCCHHHHHHHHH
Confidence 67888887653322 345789999999988 64 59999999876 59999999999999975433445555677888
Q ss_pred HHHHHcC----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC-CchH
Q 021229 108 RVMEAHS----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ-SPGK 182 (315)
Q Consensus 108 ~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 182 (315)
++++.+. +++++|+||||||.+|+.+|.++|++|+++|++++....... ...... .. ..+.+. .+.
T Consensus 88 ~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~- 158 (251)
T 2wtm_A 88 AVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEI-ARTGEL--LG-----LKFDPENIPD- 158 (251)
T ss_dssp HHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHH-HHHTEE--TT-----EECBTTBCCS-
T ss_pred HHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHH-Hhhhhh--cc-----ccCCchhcch-
Confidence 8888773 578999999999999999999999999999998764321110 000000 00 000000 000
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHH
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRL 262 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l 262 (315)
.... +........+.... ...+....+.++++|+|+|+|++|.++|++.++.+
T Consensus 159 --------~~~~----~~~~~~~~~~~~~~---------------~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~ 211 (251)
T 2wtm_A 159 --------ELDA----WDGRKLKGNYVRVA---------------QTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAF 211 (251)
T ss_dssp --------EEEE----TTTEEEETHHHHHH---------------TTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHH
T ss_pred --------HHhh----hhccccchHHHHHH---------------HccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHH
Confidence 0000 00000001111100 01112234567899999999999999999999999
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++.+ +++++++++++||++ .|+|+++++.|.+||++.
T Consensus 212 ~~~~-~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 248 (251)
T 2wtm_A 212 SKQY-KNCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQ 248 (251)
T ss_dssp HHHS-SSEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHH
T ss_pred HHhC-CCcEEEEECCCCccc-chhHHHHHHHHHHHHHHh
Confidence 9988 689999999999999 999999999999999754
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=247.28 Aligned_cols=265 Identities=16% Similarity=0.150 Sum_probs=174.0
Q ss_pred ecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHH
Q 021229 30 DLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108 (315)
Q Consensus 30 ~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~ 108 (315)
...+|..++|... +++|+|||+||++++.. .|..+++.| ..+|+|+++|+||||.|..+....+....++++.+
T Consensus 9 ~~~dG~~l~y~~~----G~gp~VV~lHG~~~~~~-~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~~~~s~~~~a~dl~~ 83 (456)
T 3vdx_A 9 ENSTSIDLYYEDH----GTGVPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNT 83 (456)
T ss_dssp ETTEEEEEEEEEE----SSSEEEEEECCTTCCGG-GGTTHHHHHHHHTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred cccCCeEEEEEEe----CCCCEEEEECCCCCcHH-HHHHHHHHHHHCCcEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3457888898875 25689999999999886 599999998 55699999999999999876666677778999999
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhh--hhhhhcccchhhhhhhccCCCchHHHH
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDL--RDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
+++.++.++++|+||||||.+++.+|+++ |++|+++|++++......... ...........................
T Consensus 84 ~l~~l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 3vdx_A 84 VLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTG 163 (456)
T ss_dssp HHHHHTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHhCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhhccchHHHHH
Confidence 99999999999999999999999999988 899999999986543221100 000000000000000000011111112
Q ss_pred HHHhhhccCCCC-CCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHHH
Q 021229 186 LMRYTFFKRPPL-SLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRLK 263 (315)
Q Consensus 186 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l~ 263 (315)
.+...+...... ..........+................... ..+....+.++++|+|+|+|++|.++|.+ ..+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~l~~i~~PvLiI~G~~D~~vp~~~~~~~l~ 242 (456)
T 3vdx_A 164 FFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFH 242 (456)
T ss_dssp HHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGT-TCCCTTTSTTCCSCCEEEEETTCSSSCGGGTHHHHH
T ss_pred HHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhh-hhhHHHHhhhCCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 222111111110 001111111111111000000111111111 12234567889999999999999999998 778888
Q ss_pred hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 264 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.+ +++++++++++||+++.++|+++++.|.+||++.
T Consensus 243 ~~~-~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~ 279 (456)
T 3vdx_A 243 KAL-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKA 279 (456)
T ss_dssp HHC-TTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHH
T ss_pred HHC-CCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHh
Confidence 877 6899999999999999999999999999999754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-32 Score=254.37 Aligned_cols=277 Identities=16% Similarity=0.230 Sum_probs=180.4
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCC--CCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRP--ERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~--~~~~ 99 (315)
.+...++++.||.+++|+.. +++|+|||+||++++.. .|..+++.|.+. |+|+++|+||||.|..... ..+.
T Consensus 236 ~~~~~~~~~~dg~~l~~~~~----g~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~~~~~~~~ 310 (555)
T 3i28_A 236 DMSHGYVTVKPRVRLHFVEL----GSGPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCM 310 (555)
T ss_dssp GSEEEEEEEETTEEEEEEEE----CSSSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTSCCCSCGGGGSH
T ss_pred ccceeEEEeCCCcEEEEEEc----CCCCEEEEEeCCCCchh-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCcccccH
Confidence 45566788888999999876 25689999999999885 699999999875 9999999999999976432 4455
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh--hhhhcccchhhhhhhccC
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR--DRMFKVSDLEEASKILVP 177 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 177 (315)
..+++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|+++++......... .................+
T Consensus 311 ~~~~~d~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (555)
T 3i28_A 311 EVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEP 390 (555)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhCC
Confidence 667899999999999999999999999999999999999999999999765533221100 000000000000000000
Q ss_pred CCc-----hHHHHHHHhhhccCC--------------------CCC----CCCcchhHHHHHHHHHHHHHHHHHhhhccC
Q 021229 178 QSP-----GKLKELMRYTFFKRP--------------------PLS----LVPSCLLSDYIDAMCTEYLEEKRELVRAIP 228 (315)
Q Consensus 178 ~~~-----~~~~~~~~~~~~~~~--------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (315)
... ..+...+...+.... ... .........+...............+..+.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (555)
T 3i28_A 391 GVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNME 470 (555)
T ss_dssp THHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHH
T ss_pred CchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhcc
Confidence 000 000111111111000 000 001111111111111110011111111110
Q ss_pred c---cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCCC
Q 021229 229 K---DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 229 ~---~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
. ......+.++++|+|+|+|++|.++|++.++.+++.+ +++++++++++||+++.|+|+++++.|.+||++....+
T Consensus 471 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 549 (555)
T 3i28_A 471 RNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNP 549 (555)
T ss_dssp HHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHTCC-
T ss_pred ccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhC-CCceEEEeCCCCCCcchhCHHHHHHHHHHHHHhccCCC
Confidence 0 0123355689999999999999999999999999988 68999999999999999999999999999998766543
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-31 Score=231.43 Aligned_cols=269 Identities=14% Similarity=0.138 Sum_probs=155.6
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCC--CCCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTR--PERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~--~~~~~ 99 (315)
+++..++++.+|..++|.... ++++++||||||++++.. |......+. ++|+|+++|+||||.|.... ..++.
T Consensus 10 ~~~~~~~~~~~g~~l~y~~~G--~~~g~pvvllHG~~~~~~--~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 85 (313)
T 1azw_A 10 PYQQGSLKVDDRHTLYFEQCG--NPHGKPVVMLHGGPGGGC--NDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTT 85 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEEE--CTTSEEEEEECSTTTTCC--CGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCH
T ss_pred ccccceEEcCCCCEEEEEecC--CCCCCeEEEECCCCCccc--cHHHHHhcCcCcceEEEECCCCCcCCCCCcccccccH
Confidence 345667888788889987752 334678999999876542 222334443 57999999999999997542 23456
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-hhhh-----hhhcccchhhhhh
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLRD-----RMFKVSDLEEASK 173 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~ 173 (315)
..+++++.++++++++++++|+||||||+||+.+|.++|++|+++|++++....... .... .... ........
T Consensus 86 ~~~~~dl~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 164 (313)
T 1azw_A 86 WDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFP-DAWEHYLN 164 (313)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhch-HHHHHHhh
Confidence 667899999999999999999999999999999999999999999998754321100 0000 0000 00000000
Q ss_pred hccCC-CchHHHHHHHhhhccCC----------------CCCCCCcc-hhHHHHHHHHHHHHHHH-HH--hhhccCc--c
Q 021229 174 ILVPQ-SPGKLKELMRYTFFKRP----------------PLSLVPSC-LLSDYIDAMCTEYLEEK-RE--LVRAIPK--D 230 (315)
Q Consensus 174 ~~~~~-~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~~--~ 230 (315)
..... .......+....+.... .....+.. ....+.+.......... .. ....+.. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
T 1azw_A 165 AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVED 244 (313)
T ss_dssp TSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred ccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccc
Confidence 00000 00000000000000000 00000000 00000000000000000 00 0011111 1
Q ss_pred ccccccccCC-CCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC-ChHHHHHHHHHH
Q 021229 231 RKISNIDKIT-QPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE-KPKEFYKHLKSF 297 (315)
Q Consensus 231 ~~~~~l~~i~-~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~f 297 (315)
.....+.+++ +|+|+|+|++|.++|++.++.+++.+ +++++++++++||+++.+ .++++.+.|.+|
T Consensus 245 ~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 245 QLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhC-CCcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 1233566785 99999999999999999999999998 689999999999988542 245555666655
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=244.73 Aligned_cols=254 Identities=15% Similarity=0.212 Sum_probs=163.7
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC-CCCCCchhHHHHHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT-RPERSESFQAECVM 107 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~ 107 (315)
..++ +.+++|+... +++|+|||+||++.+.. .|..+++.+ +|+|+++|+||||.|... ...++...+++++.
T Consensus 65 ~~~~-~~~~~~~~~g---~~~~~vv~~hG~~~~~~-~~~~~~~~l--g~~Vi~~D~~G~G~S~~~~~~~~~~~~~a~dl~ 137 (330)
T 3p2m_A 65 ERVQ-AGAISALRWG---GSAPRVIFLHGGGQNAH-TWDTVIVGL--GEPALAVDLPGHGHSAWREDGNYSPQLNSETLA 137 (330)
T ss_dssp EEEE-ETTEEEEEES---SSCCSEEEECCTTCCGG-GGHHHHHHS--CCCEEEECCTTSTTSCCCSSCBCCHHHHHHHHH
T ss_pred eeec-CceEEEEEeC---CCCCeEEEECCCCCccc-hHHHHHHHc--CCeEEEEcCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 3343 4457887763 34679999999999886 599999888 799999999999999743 34456667799999
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc-cCCCchHHHHH
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL-VPQSPGKLKEL 186 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 186 (315)
+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........ ..... ......... .......+...
T Consensus 138 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~ 213 (330)
T 3p2m_A 138 PVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRH--AELTA--EQRGTVALMHGEREFPSFQAM 213 (330)
T ss_dssp HHHHHSSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHH--HHHTC--C-----------CCBSCHHHH
T ss_pred HHHHHhCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhh--hhhhh--hhhhhhhhhcCCccccCHHHH
Confidence 99999999999999999999999999999999999999997653211100 00000 000000000 00000001111
Q ss_pred HHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHH----hhhccCcc----ccccccccCCCCeEEEEeCCCCCCchHH
Q 021229 187 MRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE----LVRAIPKD----RKISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
.......... .....+.............. ....+... .....+.++++|+|+|+|++|.++|.+.
T Consensus 214 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 287 (330)
T 3p2m_A 214 LDLTIAAAPH------RDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQD 287 (330)
T ss_dssp HHHHHHHCTT------SCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHH
T ss_pred HHHHHhcCCC------CCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHH
Confidence 1111000000 00000000000000000000 00000000 0113456789999999999999999999
Q ss_pred HHHHHhhcCCCcE-EEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 259 GRRLKSHLGDNAQ-LIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 259 ~~~l~~~~~~~~~-~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++.+.+.+ ++++ +++++++||+++.|+|+++++.|.+||++
T Consensus 288 ~~~l~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 288 TAELHRRA-THFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHHC-SSEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHHHhC-CCCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 99999998 6888 99999999999999999999999999975
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=242.92 Aligned_cols=276 Identities=14% Similarity=0.129 Sum_probs=166.0
Q ss_pred eeeecCCCc----eEEEEEecCCC-CCCCcEEEEccCCCChhhh-------------HHhhH---hhc-cccceEEeecC
Q 021229 27 SVTDLQDGS----VMHCWVPKTRN-DSKPDLVLIHGLGANALWQ-------------WTNII---PHM-IHYFNVYVPDL 84 (315)
Q Consensus 27 ~~~~~~~g~----~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~-------------w~~~~---~~l-~~~~~vi~~D~ 84 (315)
..+.+.+|. +++|......+ .++|+|||+||+++++. . |..++ ..| .++|+|+++|+
T Consensus 15 ~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 93 (377)
T 3i1i_A 15 KEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSH-AAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDN 93 (377)
T ss_dssp EEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSC-CSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECC
T ss_pred cceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcch-hccccccccccccchhhhcCCCCccccccEEEEEecc
Confidence 455666654 45776653222 24578999999998753 3 88887 455 45799999999
Q ss_pred CCCCCCC-------CC---CC-----------CCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhc
Q 021229 85 LFFGDSF-------TT---RP-----------ERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIE 142 (315)
Q Consensus 85 ~G~G~S~-------~~---~~-----------~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~ 142 (315)
||||.|+ .+ .+ .++...+++++.++++++++++++ |+||||||.+|+.+|.++|++|+
T Consensus 94 ~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~ 173 (377)
T 3i1i_A 94 LCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVE 173 (377)
T ss_dssp TTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTTBS
T ss_pred cccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHHHH
Confidence 9998743 11 01 335566789999999999999996 99999999999999999999999
Q ss_pred eeEE-eeCCCccCchhhhh--hhhc-ccchhhhhhhccCC-CchH-HH-------------HHHHhhhccCCCCC-----
Q 021229 143 KVVI-CCSGVCLEEQDLRD--RMFK-VSDLEEASKILVPQ-SPGK-LK-------------ELMRYTFFKRPPLS----- 198 (315)
Q Consensus 143 ~lil-~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~-~~~~-~~-------------~~~~~~~~~~~~~~----- 198 (315)
++|+ ++++.......... .... .............. .+.. +. ..+...+.......
T Consensus 174 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (377)
T 3i1i_A 174 RMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEK 253 (377)
T ss_dssp EEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTC
T ss_pred HhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccccccc
Confidence 9999 66554322111000 0000 00000000000000 0000 00 01111111110000
Q ss_pred CCCcchhHHHHHHHHHHH-----HHHHHHhhhccC-------ccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc
Q 021229 199 LVPSCLLSDYIDAMCTEY-----LEEKRELVRAIP-------KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL 266 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~ 266 (315)
.........++....... ..........+. .......+.++++|+|+|+|++|.++|++.++.+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~ 333 (377)
T 3i1i_A 254 VSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLL 333 (377)
T ss_dssp TTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHH
Confidence 000011222222111100 000001111110 01123456789999999999999999999999998887
Q ss_pred C---CCcEEEEEcC-CCCccccCChHHHHHHHHHHHhcCCC
Q 021229 267 G---DNAQLIVIKK-AGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 267 ~---~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
. ++++++++++ +||++++|+|+++++.|.+||++...
T Consensus 334 ~~~g~~~~~~~i~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 334 QKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp HHTTCCEEECCBCCTTGGGHHHHCGGGTHHHHHHHHHSCCS
T ss_pred HhcCCCceEEEcCCCCCCcchhcCHHHHHHHHHHHHHhhhh
Confidence 2 4789999998 99999999999999999999987654
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-31 Score=226.47 Aligned_cols=254 Identities=15% Similarity=0.155 Sum_probs=165.9
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAEC 105 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~ 105 (315)
.+...+|.+++++...+.+..+|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|.... ...+....+++
T Consensus 21 ~~~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~d 99 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTGTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 99 (303)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCSSTTCCSSTHHHHHH
T ss_pred eEecCCCeEEEEEEeccCCCCCeEEEEECCCCchhh-HHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 566678989999876544455678999999999886 69999999987 5999999999999997543 22445556777
Q ss_pred HHHHHHHcC----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc------
Q 021229 106 VMRVMEAHS----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL------ 175 (315)
Q Consensus 106 ~~~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 175 (315)
+.++++.+. .++++|+||||||.+++.++.++|++|+++|++++........ ....... ........
T Consensus 100 ~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ 176 (303)
T 3pe6_A 100 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPES-ATTFKVL--AAKVLNSVLPNLSS 176 (303)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHH-HHHHHHH--HHHHHHTTCCSCCC
T ss_pred HHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhc-cHHHHHH--HHHHHHHhcccccC
Confidence 787777664 3499999999999999999999999999999998765433211 0000000 00000000
Q ss_pred -------cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEe
Q 021229 176 -------VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWG 248 (315)
Q Consensus 176 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 248 (315)
..........+. ..... . .......+....... .. .....+.++++|+|+|+|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-----~~~~~-~-~~~~~~~~~~~~~~~----~~---------~~~~~~~~i~~P~l~i~g 236 (303)
T 3pe6_A 177 GPIDSSVLSRNKTEVDIYN-----SDPLI-C-RAGLKVCFGIQLLNA----VS---------RVERALPKLTVPFLLLQG 236 (303)
T ss_dssp CCCCGGGTCSCHHHHHHHH-----TCTTS-C-CSCCCHHHHHHHHHH----HH---------HHHHHGGGCCSCEEEEEE
T ss_pred CccchhhhhcchhHHHHhc-----cCccc-c-ccchhhhhHHHHHHH----HH---------HHHHHhhcCCCCEEEEee
Confidence 000011111110 00000 0 000000110000000 00 011345678999999999
Q ss_pred CCCCCCchHHHHHHHhhcCC-CcEEEEEcCCCCccccCChHHHHHH---HHHHHhcCCCCC
Q 021229 249 EHDQIFPLELGRRLKSHLGD-NAQLIVIKKAGHAFNYEKPKEFYKH---LKSFLLDSQPSP 305 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~~~~~~ 305 (315)
++|.+++.+..+.+.+.++. ++++++++++||+++.++|+++.+. +.+||++....+
T Consensus 237 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 297 (303)
T 3pe6_A 237 SADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 297 (303)
T ss_dssp TTCSSBCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCCCCChHHHHHHHHhcccCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999998832 6899999999999999999866655 666777665543
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-32 Score=231.69 Aligned_cols=254 Identities=14% Similarity=0.174 Sum_probs=162.8
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCC--CChhhhHHhhHhhccccceEEeecCCCCCCCC-CCCCCCCch
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG--ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSF-TTRPERSES 100 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~--~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~-~~~~~~~~~ 100 (315)
+...++.+++| .++++.. +++|+|||+||+| ++.. .|..+++.|.++|+|+++|+||||.|. ......+..
T Consensus 21 ~~~~~v~~~~~-~~~~~~~----~~~p~vv~lHG~G~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 94 (292)
T 3l80_A 21 LNKEMVNTLLG-PIYTCHR----EGNPCFVFLSGAGFFSTAD-NFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLR 94 (292)
T ss_dssp CEEEEECCTTS-CEEEEEE----CCSSEEEEECCSSSCCHHH-HTHHHHTTSCTTSEEEEECCTTSTTSCCCCCTTCCHH
T ss_pred cCcceEEecCc-eEEEecC----CCCCEEEEEcCCCCCcHHH-HHHHHHHHHhhcCeEEEEcCCCCCCCCCCCcccccHH
Confidence 45567777655 5677753 2457999999654 4443 699999999989999999999999998 444456777
Q ss_pred hHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc-c-cchhhhhhhccCC
Q 021229 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK-V-SDLEEASKILVPQ 178 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 178 (315)
.+++++.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++...... ...... . .............
T Consensus 95 ~~~~~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 171 (292)
T 3l80_A 95 DWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIY---RAGFSSDLYPQLALRRQKLKTA 171 (292)
T ss_dssp HHHHHHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHH---HHCTTSSSSHHHHHHHHTCCSH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchh---hhccccccchhHHHHHHHHhcc
Confidence 7899999999999999999999999999999999999999999999985432110 000000 0 0000000000000
Q ss_pred Cch--HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHh-----h---hccCccccccccccCCCCeEEEEe
Q 021229 179 SPG--KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL-----V---RAIPKDRKISNIDKITQPTLILWG 248 (315)
Q Consensus 179 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~l~~i~~P~lvi~G 248 (315)
... .+.......+ .......... ............ . ..+...+....+++ ++|+|+|+|
T Consensus 172 ~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g 240 (292)
T 3l80_A 172 ADRLNYLKDLSRSHF---------SSQQFKQLWR-GYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSE 240 (292)
T ss_dssp HHHHHHHHHHHHHHS---------CHHHHHHHHH-HHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEEC
T ss_pred CchhhhHhhcccccc---------CHHHHHHhHH-HHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEc
Confidence 000 0000000000 0000000000 000000000000 0 00111111235566 899999999
Q ss_pred CCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 249 EHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++|..++++ + .+.+.+ ++++ ++++++||+++.|+|+++++.|.+||++.
T Consensus 241 ~~D~~~~~~-~-~~~~~~-~~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 289 (292)
T 3l80_A 241 SFREKEYLE-S-EYLNKH-TQTK-LILCGQHHYLHWSETNSILEKVEQLLSNH 289 (292)
T ss_dssp GGGHHHHHT-S-TTCCCC-TTCE-EEECCSSSCHHHHCHHHHHHHHHHHHHTC
T ss_pred cCccccchH-H-HHhccC-CCce-eeeCCCCCcchhhCHHHHHHHHHHHHHhc
Confidence 999999988 6 777777 6788 99999999999999999999999999854
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.98 E-value=3e-31 Score=220.91 Aligned_cols=235 Identities=17% Similarity=0.243 Sum_probs=159.6
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH---
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM--- 110 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l--- 110 (315)
|.+++|....+ ++++|+|||+||++++.. .|. +++.|.++|+|+++|+||||.|. .....+....++++.+++
T Consensus 2 g~~l~y~~~g~-~~~~~~vv~~hG~~~~~~-~~~-~~~~l~~g~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~ 77 (245)
T 3e0x_A 2 NAMLHYVHVGN-KKSPNTLLFVHGSGCNLK-IFG-ELEKYLEDYNCILLDLKGHGESK-GQCPSTVYGYIDNVANFITNS 77 (245)
T ss_dssp CCCCCEEEEEC-TTCSCEEEEECCTTCCGG-GGT-TGGGGCTTSEEEEECCTTSTTCC-SCCCSSHHHHHHHHHHHHHHC
T ss_pred CceeEEEecCC-CCCCCEEEEEeCCcccHH-HHH-HHHHHHhCCEEEEecCCCCCCCC-CCCCcCHHHHHHHHHHHHHhh
Confidence 44567766532 235789999999999886 588 88888889999999999999997 444556677789999999
Q ss_pred ---HHcCCCceEEEEEchhHHHHHHHHHh-hhhhhceeEEeeCCCccCch--hhhhhhhcccchhhhhhhccCCCchHHH
Q 021229 111 ---EAHSVKKLSLVGLSYGGFVGYSMAAQ-FKEKIEKVVICCSGVCLEEQ--DLRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 111 ---~~l~~~~v~lvGhSmGG~ia~~~a~~-~p~~v~~lil~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
+.++ +++|+||||||.+++.++.+ +|+ |+++|++++....... ....................+.......
T Consensus 78 ~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T 3e0x_A 78 EVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLS 154 (245)
T ss_dssp TTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHH
T ss_pred hhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHH
Confidence 8877 99999999999999999999 999 9999999876544211 1000000000000000000000000000
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
.. +..... . ....+. ..+......+....+.++++|+++|+|++|.++|.+..+.+.+
T Consensus 155 ~~----~~~~~~-----~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 212 (245)
T 3e0x_A 155 EK----YFETLE-----K-DPDIMI------------NDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKK 212 (245)
T ss_dssp HH----HHTTSC-----S-SHHHHH------------HHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred HH----HHHHHh-----c-CcHHHH------------HHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00 000000 0 000010 0001111112334567889999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
.+ +++++++++++||+++.++|+++.+.|.+||
T Consensus 213 ~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 213 EV-ENSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp HS-SSEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred Hc-CCceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 98 6899999999999999999999999999986
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=230.37 Aligned_cols=251 Identities=18% Similarity=0.213 Sum_probs=153.5
Q ss_pred eeeecCCC---ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCC-CCCCch
Q 021229 27 SVTDLQDG---SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTR-PERSES 100 (315)
Q Consensus 27 ~~~~~~~g---~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~-~~~~~~ 100 (315)
.++.++++ ..++|+... +++|+||||||++.+.. .|..+++.|++ +|+|+++|+||||.|.... ..++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g---~~~p~lvllHG~~~~~~-~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~~~~~~~~ 91 (316)
T 3c5v_A 16 EDVEVENETGKDTFRVYKSG---SEGPVLLLLHGGGHSAL-SWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAE 91 (316)
T ss_dssp EEEEEEETTEEEEEEEEEEC---SSSCEEEEECCTTCCGG-GGHHHHHHHHTTBCCEEEEECCTTSTTCBCSCTTCCCHH
T ss_pred ceEEecCCcceEEEEEEecC---CCCcEEEEECCCCcccc-cHHHHHHHHhhcCCeEEEEecCCCCCCCCCCCccccCHH
Confidence 45666543 468888752 34678999999998875 69999999988 8999999999999997543 346677
Q ss_pred hHHHHHHHHHHHc--CC-CceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeCCCccCchhhh--hhhhc-----ccch
Q 021229 101 FQAECVMRVMEAH--SV-KKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCSGVCLEEQDLR--DRMFK-----VSDL 168 (315)
Q Consensus 101 ~~a~~~~~~l~~l--~~-~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~~~~~~~~~~~--~~~~~-----~~~~ 168 (315)
.+++++.++++++ +. ++++|+||||||+||+.+|.+ +|+ |+++|++++.......... ..... ....
T Consensus 92 ~~a~dl~~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (316)
T 3c5v_A 92 TMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSL 170 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCCHHHHHHHHHHHHHHHHHSCSCBSSH
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcccccchhhhHHHHHHHHhhCccccccH
Confidence 7899999999999 66 789999999999999999996 576 9999998753211000000 00000 0000
Q ss_pred hhhhhhc----cCCCchHHHHHHHhhhccCCC------------CCCCCc-chhHHHHHHHHHHHHHHHHHhhhccCccc
Q 021229 169 EEASKIL----VPQSPGKLKELMRYTFFKRPP------------LSLVPS-CLLSDYIDAMCTEYLEEKRELVRAIPKDR 231 (315)
Q Consensus 169 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (315)
....... ...........+......... ..+... .....+.. .... .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-----~ 234 (316)
T 3c5v_A 171 ENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKKDHPYTWRIELAKTEKYWD-----------GWFR-----G 234 (316)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHEEECC------------CEEESCCGGGGHHHHH-----------HHHT-----T
T ss_pred HHHHHHhhhcccccchhhhhhhhhHHhhhccccccccccccccceeeeecccchhhhhh-----------hhhh-----h
Confidence 0000000 000000000000000000000 000000 00000000 0000 0
Q ss_pred cccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 232 KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 232 ~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
....+.++++|+|+|+|++|.+.+..... +.. +++++++++++||+++.|+|++|++.|.+||.+..
T Consensus 235 ~~~~~~~i~~P~Lli~g~~D~~~~~~~~~---~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 301 (316)
T 3c5v_A 235 LSNLFLSCPIPKLLLLAGVDRLDKDLTIG---QMQ-GKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHR 301 (316)
T ss_dssp HHHHHHHSSSCEEEEESSCCCCCHHHHHH---HHT-TCSEEEECCCCSSCHHHHSHHHHHHHHHHHHHHTT
T ss_pred hHHHhhcCCCCEEEEEecccccccHHHHH---hhC-CceeEEEcCCCCCcccccCHHHHHHHHHHHHHhcc
Confidence 01123468999999999999876543322 223 57899999999999999999999999999997543
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-34 Score=248.14 Aligned_cols=271 Identities=19% Similarity=0.240 Sum_probs=169.8
Q ss_pred cceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC-----CCC
Q 021229 22 LGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT-----RPE 96 (315)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~-----~~~ 96 (315)
.++...++++ +|..++|+.. +++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|..+ ...
T Consensus 3 ~~~~~~~~~~-~g~~~~~~~~----g~~p~vv~lHG~~~~~~-~~~~~~~~l~~g~~v~~~D~~G~G~s~~~~~~~~~~~ 76 (304)
T 3b12_A 3 EGFERRLVDV-GDVTINCVVG----GSGPALLLLHGFPQNLH-MWARVAPLLANEYTVVCADLRGYGGSSKPVGAPDHAN 76 (304)
Confidence 3455666777 6778888764 25689999999998875 69999999998899999999999999765 234
Q ss_pred CCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccch-------h
Q 021229 97 RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL-------E 169 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~-------~ 169 (315)
++...+++++.++++.++.++++|+||||||.+|+.+|.++|++|+++|++++................... .
T Consensus 77 ~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
T 3b12_A 77 YSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQP 156 (304)
Confidence 556667889999999999999999999999999999999999999999999875433211100000000000 0
Q ss_pred -hhhhhccCCCch-HHHH-HHHhhhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHHhhhccCccc----cccccccCCC
Q 021229 170 -EASKILVPQSPG-KLKE-LMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVRAIPKDR----KISNIDKITQ 241 (315)
Q Consensus 170 -~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~l~~i~~ 241 (315)
.....+...... .+.. ++...+... . ..+......+....... ........+....... ....+.++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 233 (304)
T 3b12_A 157 APYPEKVIGADPDTFYEGCLFGWGATGA-D--GFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQC 233 (304)
Confidence 000000000000 0000 000000000 0 00111111111100000 0000011111111111 1111678999
Q ss_pred CeEEEEeCCCCCC-chHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 242 PTLILWGEHDQIF-PLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 242 P~lvi~G~~D~~~-~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
|+|+|+|++|..+ +....+.+.+.. ++++++++ ++||+++.|+|+++++.|.+||++...
T Consensus 234 P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (304)
T 3b12_A 234 PALVFSGSAGLMHSLFEMQVVWAPRL-ANMRFASL-PGGHFFVDRFPDDTARILREFLSDARS 294 (304)
Confidence 9999999999544 666777777776 67889999 999999999999999999999987644
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=235.11 Aligned_cols=266 Identities=14% Similarity=0.173 Sum_probs=166.7
Q ss_pred CCceEEEEEecCCCC-CCCcEEEEccCCCChhhh---------HHhhHhh---c-cccceEEeecCCC-CCCCCCCCC--
Q 021229 33 DGSVMHCWVPKTRND-SKPDLVLIHGLGANALWQ---------WTNIIPH---M-IHYFNVYVPDLLF-FGDSFTTRP-- 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~-~~~~vvllHG~~~~~~~~---------w~~~~~~---l-~~~~~vi~~D~~G-~G~S~~~~~-- 95 (315)
+|..++|....+.+. ++|+|||+||++++.. . |..+++. | ..+|+|+++|+|| ||.|+.+..
T Consensus 42 ~g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~ 120 (377)
T 2b61_A 42 SYINVAYQTYGTLNDEKNNAVLICHALTGDAE-PYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSIN 120 (377)
T ss_dssp CSEEEEEEEESCCCTTCCCEEEEECCTTCCSC-SCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBC
T ss_pred cceeEEEEecccccccCCCeEEEeCCCCCccc-cccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccC
Confidence 456788877532211 2689999999998875 5 8888863 7 6779999999999 688864421
Q ss_pred ------------CCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh--hhh
Q 021229 96 ------------ERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD--LRD 160 (315)
Q Consensus 96 ------------~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~ 160 (315)
.++...+++++.++++.+++++++ |+||||||.+|+.+|.++|++|+++|++++........ ...
T Consensus 121 ~~~g~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 200 (377)
T 2b61_A 121 PQTGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 200 (377)
T ss_dssp TTTSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred ccccccccccCCcccHHHHHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHH
Confidence 346667799999999999999998 99999999999999999999999999998765432111 000
Q ss_pred hhhc-ccchhhhhh-hcc-CCCch-HH--H-----------HHHHhhhccCCCCC--C-CCcchhHHHHHHHHHH-----
Q 021229 161 RMFK-VSDLEEASK-ILV-PQSPG-KL--K-----------ELMRYTFFKRPPLS--L-VPSCLLSDYIDAMCTE----- 215 (315)
Q Consensus 161 ~~~~-~~~~~~~~~-~~~-~~~~~-~~--~-----------~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~----- 215 (315)
.... +........ .+. ...+. .+ . ..+...+....... . ........+.......
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (377)
T 2b61_A 201 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 280 (377)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhcccc
Confidence 0000 000000000 000 00000 00 0 00111111110000 0 0011222332211000
Q ss_pred HHHHHHHhhhccCc-------cccccccccCCCCeEEEEeCCCCCCch----HHHHHHHhhcCCCcEEEEEc-CCCCccc
Q 021229 216 YLEEKRELVRAIPK-------DRKISNIDKITQPTLILWGEHDQIFPL----ELGRRLKSHLGDNAQLIVIK-KAGHAFN 283 (315)
Q Consensus 216 ~~~~~~~~~~~~~~-------~~~~~~l~~i~~P~lvi~G~~D~~~~~----~~~~~l~~~~~~~~~~~~i~-~~gH~~~ 283 (315)
...........+.. ......+.++++|+|+|+|++|.++|+ +.++.+.+.+ +++++++++ ++||+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~gH~~~ 359 (377)
T 2b61_A 281 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSG-VDLHFYEFPSDYGHDAF 359 (377)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTT-CEEEEEEECCTTGGGHH
T ss_pred ChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcC-CCceEEEeCCCCCchhh
Confidence 00111111111100 112345678999999999999999999 8889998888 689999999 9999999
Q ss_pred cCChHHHHHHHHHHHhc
Q 021229 284 YEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~ 300 (315)
.|+|+++++.|.+||++
T Consensus 360 ~e~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 360 LVDYDQFEKRIRDGLAG 376 (377)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 99999999999999975
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-30 Score=233.38 Aligned_cols=268 Identities=15% Similarity=0.173 Sum_probs=164.9
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc----------cceEEeecCCCCCCCCCCCC-C
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH----------YFNVYVPDLLFFGDSFTTRP-E 96 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~----------~~~vi~~D~~G~G~S~~~~~-~ 96 (315)
++.+ +|..+||....+.++++++|||+||++++.. .|..+++.|.+ .|+|+++|+||||.|+.+.. .
T Consensus 72 ~~~i-~g~~i~~~~~~~~~~~~~plll~HG~~~s~~-~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~~~ 149 (388)
T 4i19_A 72 TTEI-DGATIHFLHVRSPEPDATPMVITHGWPGTPV-EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKSAG 149 (388)
T ss_dssp EEEE-TTEEEEEEEECCSSTTCEEEEEECCTTCCGG-GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSSCC
T ss_pred EEEE-CCeEEEEEEccCCCCCCCeEEEECCCCCCHH-HHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCCCC
Confidence 3444 6889999876554556789999999999885 69999999987 89999999999999986543 5
Q ss_pred CCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hh----hhh----hhhcccc
Q 021229 97 RSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QD----LRD----RMFKVSD 167 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~----~~~----~~~~~~~ 167 (315)
.+...+++++.++++.++.++++|+||||||.+++.+|.++|++|++++++++...... .. +.. .......
T Consensus 150 ~~~~~~a~~~~~l~~~lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 229 (388)
T 4i19_A 150 WELGRIAMAWSKLMASLGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQTNLSGEPGELETLSDADKARLAVSER 229 (388)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCCCBCCCGGGGGGCCHHHHHHHHTHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 56777899999999999999999999999999999999999999999999875332211 00 000 0000000
Q ss_pred hhh---hhhhccC-----------CCchHHHHHHHhhhccCCCCC-CC-CcchhHHHHHHH----HHHHHHHHHHhhhcc
Q 021229 168 LEE---ASKILVP-----------QSPGKLKELMRYTFFKRPPLS-LV-PSCLLSDYIDAM----CTEYLEEKRELVRAI 227 (315)
Q Consensus 168 ~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 227 (315)
+.. ....... .++..+..++...+....... .. ......+.+... ...........+...
T Consensus 230 ~~~~~~~~~~~~~~~p~~~~~~l~dsp~gl~a~i~ek~~~w~~~~~~~~~~~~~d~ll~~~~~y~~t~~~~~s~~~y~e~ 309 (388)
T 4i19_A 230 FLDDLSGPMKMQSTRPHTIGYMLNDSPVAQLAYLLEMFKHWAQTENVPEDAVDRDLMLTHISLFWFTATGGSAAQAHYEL 309 (388)
T ss_dssp HHHHTCHHHHHHTTCHHHHHHHHHTCHHHHHHHHHHHHHHTSCCSSSGGGTSCHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHcCChHHHHhcCCchhhhhHhhCCHHHHHHHHHHHHHHhcCCCCCcccCCCHHHHHHHHHHHHhcCCchhHHHHHHHh
Confidence 000 0000000 111111111111111100000 00 001111111110 000111111111111
Q ss_pred C--ccc--cccccccCCCCeEEEEeCCCCCCchH-HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 228 P--KDR--KISNIDKITQPTLILWGEHDQIFPLE-LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 228 ~--~~~--~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
. ... ....+..+++|+++++|.+|...++. .++.. .++..++.+++++||++++|+|+.|++.|.+|+.+
T Consensus 310 ~~~~~~~~~~~~~~~i~vP~~v~~g~~D~~~~p~~~~~~~---~~~~~~~~~~~~gGHf~~~E~Pe~~~~~l~~fl~~ 384 (388)
T 4i19_A 310 KPFLPITSLIGRSPTLDVPMGVAVYPGALFQPVRSLAERD---FKQIVHWAELDRGGHFSAMEEPDLFVDDLRTFNRT 384 (388)
T ss_dssp GGGCTTTCCBCCCCCBCSCEEEEECTBCSSCCCHHHHHHH---BTTEEEEEECSSCBSSHHHHCHHHHHHHHHHHHHH
T ss_pred hcccccccccccCCCCCCCEEEEeCCcccccccHHHHHHh---CCCeEEEEECCCCcCccchhcHHHHHHHHHHHHHH
Confidence 1 110 11245679999999999999666543 33322 22336788899999999999999999999999975
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-31 Score=234.76 Aligned_cols=259 Identities=15% Similarity=0.153 Sum_probs=163.7
Q ss_pred CceEEEEEecCCC-CCCCcEEEEccCCCChhh------------hHHhhHh---hc-cccceEEeecCCC--CCCCCCCC
Q 021229 34 GSVMHCWVPKTRN-DSKPDLVLIHGLGANALW------------QWTNIIP---HM-IHYFNVYVPDLLF--FGDSFTTR 94 (315)
Q Consensus 34 g~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~------------~w~~~~~---~l-~~~~~vi~~D~~G--~G~S~~~~ 94 (315)
|..++|....+.+ +++|+|||+||++++... .|..+++ .| ..+|+|+++|+|| ||.|....
T Consensus 30 g~~l~y~~~g~~~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~ 109 (366)
T 2pl5_A 30 PVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 109 (366)
T ss_dssp SEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred CceeeEEeccCcCCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCC
Confidence 4578887753221 136899999999988741 4888875 34 6679999999999 89886421
Q ss_pred --C-----------CCCchhHHHHHHHHHHHcCCCce-EEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh--
Q 021229 95 --P-----------ERSESFQAECVMRVMEAHSVKKL-SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-- 158 (315)
Q Consensus 95 --~-----------~~~~~~~a~~~~~~l~~l~~~~v-~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-- 158 (315)
+ .++...+++++.+++++++.+++ +|+||||||.+|+.+|.++|++|+++|++++.........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 189 (366)
T 2pl5_A 110 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 189 (366)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred CCCCCCccccCCCCcccHHHHHHHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchh
Confidence 1 24667779999999999999999 8999999999999999999999999999987654332110
Q ss_pred hhhhhc-c-cc----------------h--hhhhhhccCCCchHHHHHHHhhhccCCC---CCCCCc-----------ch
Q 021229 159 RDRMFK-V-SD----------------L--EEASKILVPQSPGKLKELMRYTFFKRPP---LSLVPS-----------CL 204 (315)
Q Consensus 159 ~~~~~~-~-~~----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------~~ 204 (315)
...... . .. . ..............+...+......... ...... ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (366)
T 2pl5_A 190 NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRF 269 (366)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCC
T ss_pred hHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhccc
Confidence 000000 0 00 0 0000000000111111111111100000 000000 00
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCcc---ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC----CcEEEEE-c
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKD---RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD----NAQLIVI-K 276 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~----~~~~~~i-~ 276 (315)
........ ...+...... .....+.++++|+|+|+|++|.++|++.++.+.+.+ + +++++++ +
T Consensus 270 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 340 (366)
T 2pl5_A 270 DANSYIYV--------TKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSL-EAADKRVFYVELQS 340 (366)
T ss_dssp CHHHHHHH--------HHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHH-HHTTCCEEEEEECC
T ss_pred ChhHHHHH--------HhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHh-hhcccCeEEEEeCC
Confidence 00000000 0001100000 112356789999999999999999999999999988 5 7899999 8
Q ss_pred CCCCccccCChHHHHHHHHHHHhcC
Q 021229 277 KAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 277 ~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++||+++.|+|+++++.|.+||++.
T Consensus 341 ~~gH~~~~e~p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 341 GEGHDSFLLKNPKQIEILKGFLENP 365 (366)
T ss_dssp CBSSGGGGSCCHHHHHHHHHHHHCC
T ss_pred CCCcchhhcChhHHHHHHHHHHccC
Confidence 9999999999999999999999853
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=228.41 Aligned_cols=252 Identities=16% Similarity=0.164 Sum_probs=164.8
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC-CCCCchhHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR-PERSESFQAEC 105 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~~ 105 (315)
.+...||.+++++...+.++.+|+|||+||++.+.. .|..+++.|.+ +|+|+++|+||||.|.... ...+....+++
T Consensus 39 ~~~~~dg~~l~~~~~~p~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~d 117 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPTGTPKALIFVSHGAGEHSG-RYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 117 (342)
T ss_dssp EEECTTSCEEEEEEECCSSCCSEEEEEECCTTCCGG-GGHHHHHHHHTTTEEEEEECCTTSTTSCSSTTCCSCTHHHHHH
T ss_pred eEEccCCeEEEEEEeCCCCCCCcEEEEECCCCcccc-hHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCCCcCcHHHHHHH
Confidence 566678999998876554555678999999999886 69999999987 5999999999999997543 33445556777
Q ss_pred HHHHHHHcC----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc-cc-hhhhh-------
Q 021229 106 VMRVMEAHS----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV-SD-LEEAS------- 172 (315)
Q Consensus 106 ~~~~l~~l~----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~-~~-~~~~~------- 172 (315)
+.++++.+. .++++|+||||||.+++.+|.++|++|+++|++++........ ....... .. .....
T Consensus 118 ~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 196 (342)
T 3hju_A 118 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPES-ATTFKVLAAKVLNLVLPNLSLGP 196 (342)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTT-TSHHHHHHHHHHHHHCTTCBCCC
T ss_pred HHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhh-hhHHHHHHHHHHHHhccccccCc
Confidence 777777664 3499999999999999999999999999999998765433211 0000000 00 00000
Q ss_pred --hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 173 --KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 173 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
.............+. ..... ........+....... .. .....+.++++|+|+|+|++
T Consensus 197 ~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~----~~---------~~~~~~~~i~~Pvlii~G~~ 256 (342)
T 3hju_A 197 IDSSVLSRNKTEVDIYN-----SDPLI--CRAGLKVCFGIQLLNA----VS---------RVERALPKLTVPFLLLQGSA 256 (342)
T ss_dssp CCGGGSCSCHHHHHHHH-----TCTTC--CCSCCBHHHHHHHHHH----HH---------HHHHHGGGCCSCEEEEEETT
T ss_pred ccccccccchHHHHHHh-----cCccc--ccccccHHHHHHHHHH----HH---------HHHHHHHhCCcCEEEEEeCC
Confidence 000001111111110 00000 0000001111100000 00 01234567899999999999
Q ss_pred CCCCchHHHHHHHhhcCC-CcEEEEEcCCCCccccCChHHHHHH---HHHHHhcC
Q 021229 251 DQIFPLELGRRLKSHLGD-NAQLIVIKKAGHAFNYEKPKEFYKH---LKSFLLDS 301 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~---i~~fl~~~ 301 (315)
|.+++.+.++.+.+.++. ++++++++++||+++.++|+++++. +.+||++.
T Consensus 257 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~ 311 (342)
T 3hju_A 257 DRLCDSKGAYLLMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQR 311 (342)
T ss_dssp CSSSCHHHHHHHHHHCCCSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcccChHHHHHHHHHcCCCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcc
Confidence 999999999999998842 6899999999999999999866665 66677644
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.7e-32 Score=227.96 Aligned_cols=240 Identities=19% Similarity=0.211 Sum_probs=167.6
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCC--hhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCc
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGAN--ALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSE 99 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~--~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~ 99 (315)
++...++.. +|..++++...+.+.++|+|||+||++++ .. .|..+.+.|.+. |+|+++|+||||.|.......+.
T Consensus 21 ~~~~~~~~~-~g~~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~ 98 (270)
T 3pfb_A 21 GMATITLER-DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTS-LLREIANSLRDENIASVRFDFNGHGDSDGKFENMTV 98 (270)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECSSSSEEEEEEECCTTCCTTCH-HHHHHHHHHHHTTCEEEEECCTTSTTSSSCGGGCCH
T ss_pred cceEEEecc-CCEEEEEEEEcCCCCCCCEEEEEcCCCCCcccc-HHHHHHHHHHhCCcEEEEEccccccCCCCCCCccCH
Confidence 344445554 68888888765444457799999999977 43 488888888765 99999999999999765555566
Q ss_pred hhHHHHHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 100 SFQAECVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 100 ~~~a~~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
...++++.++++.+ +.++++|+||||||.+|+.++.++|++|+++|++++................ ..
T Consensus 99 ~~~~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~--------~~ 170 (270)
T 3pfb_A 99 LNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGV--------TY 170 (270)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTE--------EC
T ss_pred HHHHHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhcc--------cc
Confidence 66688888888887 7789999999999999999999999999999998765532211000000000 00
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
.+.. ... ............+..... .......+.++++|+|+|+|++|.++|
T Consensus 171 ~~~~------------~~~-~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~g~~D~~~~ 222 (270)
T 3pfb_A 171 NPDH------------IPD-RLPFKDLTLGGFYLRIAQ---------------QLPIYEVSAQFTKPVCLIHGTDDTVVS 222 (270)
T ss_dssp CTTS------------CCS-EEEETTEEEEHHHHHHHH---------------HCCHHHHHTTCCSCEEEEEETTCSSSC
T ss_pred Cccc------------ccc-cccccccccchhHhhccc---------------ccCHHHHHhhCCccEEEEEcCCCCCCC
Confidence 0000 000 000000011111111100 001123456789999999999999999
Q ss_pred hHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 256 LELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 256 ~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+.++.+.+.+ +++++++++++||.++.++|+++.+.|.+||++.
T Consensus 223 ~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 223 PNASKKYDQIY-QNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp THHHHHHHHHC-SSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCeEEEcCCCCcccCccchHHHHHHHHHHHhhc
Confidence 99999999988 6899999999999999999999999999999864
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-31 Score=227.41 Aligned_cols=231 Identities=12% Similarity=0.201 Sum_probs=145.0
Q ss_pred eeeecCCCceEEEEEecCCC---CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCC-CCCCCCCCCCCchh
Q 021229 27 SVTDLQDGSVMHCWVPKTRN---DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFF-GDSFTTRPERSESF 101 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~---~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~-G~S~~~~~~~~~~~ 101 (315)
.++++.||..+++|...+.. +++|+|||+||++++.. .|..+++.|++ +|+|+++|+||| |.|+.....++...
T Consensus 10 ~~i~~~dG~~l~~~~~~p~~~~~~~~~~VvllHG~g~~~~-~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~~~~~~~ 88 (305)
T 1tht_A 10 HVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTT 88 (305)
T ss_dssp EEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------CCCHHH
T ss_pred EEEEcCCCCEEEEEEecCcccCCCCCCEEEEecCCccCch-HHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcccceehHH
Confidence 45677789899998764321 24689999999999886 59999999976 599999999999 99975444455555
Q ss_pred HHHHHHHHHHH---cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 102 QAECVMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 102 ~a~~~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
+++++.++++. ++.++++|+||||||.+|+.+|.+ | +|+++|++++...... ......... ....
T Consensus 89 ~~~D~~~~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~--~~~~~~~~~--------~~~~ 156 (305)
T 1tht_A 89 GKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRD--TLEKALGFD--------YLSL 156 (305)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHH--HHHHHHSSC--------GGGS
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHH--HHHHHhhhh--------hhhc
Confidence 66666666654 488999999999999999999998 7 8999998765321110 000000000 0000
Q ss_pred CchHHHHHHHhhhccCCCCCCC-CcchhHHHHHHHHHHHHHHHHHhhhccCc-cccccccccCCCCeEEEEeCCCCCCch
Q 021229 179 SPGKLKELMRYTFFKRPPLSLV-PSCLLSDYIDAMCTEYLEEKRELVRAIPK-DRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
.... ... ..... .......+...... ..... ......+.++++|+|+|+|++|.++|+
T Consensus 157 ~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 216 (305)
T 1tht_A 157 PIDE---------LPN-DLDFEGHKLGSEVFVRDCFE----------HHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQ 216 (305)
T ss_dssp CGGG---------CCS-EEEETTEEEEHHHHHHHHHH----------TTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCH
T ss_pred chhh---------Ccc-cccccccccCHHHHHHHHHh----------ccccchhhHHHHHhhcCCCEEEEEeCCCCccCH
Confidence 0000 000 00000 00000111111000 00000 001234678999999999999999999
Q ss_pred HHHHHHHhhcC-CCcEEEEEcCCCCccccCChHHHH
Q 021229 257 ELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFY 291 (315)
Q Consensus 257 ~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~ 291 (315)
+.++.+++.++ +++++++++++||.++ |+|+.+.
T Consensus 217 ~~~~~l~~~i~~~~~~l~~i~~agH~~~-e~p~~~~ 251 (305)
T 1tht_A 217 EEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVVLR 251 (305)
T ss_dssp HHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCCCchh-hCchHHH
Confidence 99999998774 4789999999999996 8897543
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=237.68 Aligned_cols=264 Identities=16% Similarity=0.216 Sum_probs=165.6
Q ss_pred CceEEEEEecCCC-CCCCcEEEEccCCCChhhh---HHhhHh---hc-cccceEEeecCCC--CCCCCCCC--C------
Q 021229 34 GSVMHCWVPKTRN-DSKPDLVLIHGLGANALWQ---WTNIIP---HM-IHYFNVYVPDLLF--FGDSFTTR--P------ 95 (315)
Q Consensus 34 g~~~~~~~~~~~~-~~~~~vvllHG~~~~~~~~---w~~~~~---~l-~~~~~vi~~D~~G--~G~S~~~~--~------ 95 (315)
|..++|+...+.+ .++++|||+||++++.. . |..++. .| .++|+|+++|+|| ||.|.... +
T Consensus 93 g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~-~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~ 171 (444)
T 2vat_A 93 DVPVAYKSWGRMNVSRDNCVIVCHTLTSSAH-VTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQR 171 (444)
T ss_dssp EEEEEEEEESCCCTTSCCEEEEECCTTCCSC-GGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--C
T ss_pred ceeEEEEEecCCCCCCCCeEEEECCCCcccc-hhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccc
Confidence 3467777764322 23579999999998874 5 888876 46 5779999999999 68885311 1
Q ss_pred -------CCCchhHHHHHHHHHHHcCCCc-eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh--hhh----
Q 021229 96 -------ERSESFQAECVMRVMEAHSVKK-LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL--RDR---- 161 (315)
Q Consensus 96 -------~~~~~~~a~~~~~~l~~l~~~~-v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--~~~---- 161 (315)
.++...+++++.+++++++.++ ++|+||||||++|+.+|.++|++|+++|++++......... ...
T Consensus 172 ~~~~~f~~~t~~~~a~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~ 251 (444)
T 2vat_A 172 PYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQC 251 (444)
T ss_dssp BCGGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHH
Confidence 2466678999999999999999 99999999999999999999999999999987654322110 000
Q ss_pred hhcccchhhhhhhcc-CCCch---HHHH-----------HHHhhhccCCCC-----------------------CC--CC
Q 021229 162 MFKVSDLEEASKILV-PQSPG---KLKE-----------LMRYTFFKRPPL-----------------------SL--VP 201 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~~---~~~~-----------~~~~~~~~~~~~-----------------------~~--~~ 201 (315)
......+.. .... ...+. .... .+...+...... .+ ..
T Consensus 252 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (444)
T 2vat_A 252 IYDDPKYLD--GEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQP 329 (444)
T ss_dssp HHHSTTSGG--GTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------C
T ss_pred HhcCCcccc--ccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCc
Confidence 000000000 0000 00000 0000 011111111100 00 00
Q ss_pred cchhHHHHHHHHHHH-----HHHHHHhhhccCcc--------ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC
Q 021229 202 SCLLSDYIDAMCTEY-----LEEKRELVRAIPKD--------RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD 268 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--------~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~ 268 (315)
......+.+...... ..........+... +....+.++++|+|+|+|++|.++|.+.++.+++.+ +
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~-p 408 (444)
T 2vat_A 330 IEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSI-P 408 (444)
T ss_dssp GGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHS-T
T ss_pred hhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHC-C
Confidence 011122221110000 00111111111111 123456789999999999999999999999999998 6
Q ss_pred CcEEEEEc-CCCCccccCChHHHHHHHHHHHhcC
Q 021229 269 NAQLIVIK-KAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 269 ~~~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++++++++ ++||+++.|+|+++++.|.+||++.
T Consensus 409 ~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~~ 442 (444)
T 2vat_A 409 NSRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQS 442 (444)
T ss_dssp TEEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC-
T ss_pred CcEEEEeCCCCCcchHHhCHHHHHHHHHHHHHHh
Confidence 89999999 8999999999999999999999764
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-30 Score=227.80 Aligned_cols=272 Identities=15% Similarity=0.139 Sum_probs=165.2
Q ss_pred eeeeeecCCCceEEEEEecCCC------CCCCcEEEEccCCCChhhhHHhhHh------hcccc-ceEEeecCCCCCCCC
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRN------DSKPDLVLIHGLGANALWQWTNIIP------HMIHY-FNVYVPDLLFFGDSF 91 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~------~~~~~vvllHG~~~~~~~~w~~~~~------~l~~~-~~vi~~D~~G~G~S~ 91 (315)
+..++.+.||..++++...++. +++|+|||+||++++.. .|..+.+ .|.+. |+|+++|+||||.|.
T Consensus 28 ~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~-~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~ 106 (377)
T 1k8q_A 28 EEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVWLGNSRGNTWAR 106 (377)
T ss_dssp EEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSC
T ss_pred eEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchh-hhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCC
Confidence 4456777899988988764433 36789999999998875 5887776 77765 999999999999997
Q ss_pred CC-----CC----CCCchhHHH-HHHH----HHHHcCCCceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCccC
Q 021229 92 TT-----RP----ERSESFQAE-CVMR----VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLE 154 (315)
Q Consensus 92 ~~-----~~----~~~~~~~a~-~~~~----~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~ 154 (315)
.. .. ..+...+++ ++.+ +++.++.++++|+||||||.+++.+|.++|+ +|+++|++++.....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~ 186 (377)
T 1k8q_A 107 RNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVK 186 (377)
T ss_dssp EESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCS
T ss_pred CCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcc
Confidence 42 11 344445555 5555 4456788999999999999999999999999 899999998654332
Q ss_pred chh-hhhhhhcccc--hhhhhh--hccCCCc---------------hH-HHHHHHhhhccCCCCCCCCcchhHHHHHH--
Q 021229 155 EQD-LRDRMFKVSD--LEEASK--ILVPQSP---------------GK-LKELMRYTFFKRPPLSLVPSCLLSDYIDA-- 211 (315)
Q Consensus 155 ~~~-~~~~~~~~~~--~~~~~~--~~~~~~~---------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 211 (315)
... .......... ...... .+.+... .. ....+.. ...... ..........+...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~ 264 (377)
T 1k8q_A 187 YTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFI-ICGFDT-MNLNMSRLDVYLSHNP 264 (377)
T ss_dssp SCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHH-HHCCCG-GGSCGGGHHHHHTTCC
T ss_pred cchhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHH-hcCCCc-ccCCHHHHHHHhccCC
Confidence 110 0000000000 000000 0000000 00 0000000 000000 00011111111000
Q ss_pred ------HHHHHHHHHHH-hhhccC------------c-cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcE
Q 021229 212 ------MCTEYLEEKRE-LVRAIP------------K-DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271 (315)
Q Consensus 212 ------~~~~~~~~~~~-~~~~~~------------~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~ 271 (315)
........... .+..+. . ......+.++++|+|+|+|++|.++|++.++.+.+.+ ++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~ 343 (377)
T 1k8q_A 265 AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKL-PNLI 343 (377)
T ss_dssp CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTC-TTEE
T ss_pred CCccHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhC-cCcc
Confidence 00000000000 000000 0 0012347889999999999999999999999999998 5776
Q ss_pred -EEEEcCCCCcccc---CChHHHHHHHHHHHhc
Q 021229 272 -LIVIKKAGHAFNY---EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 272 -~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~ 300 (315)
+++++++||++++ ++|+++++.|.+||++
T Consensus 344 ~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 376 (377)
T 1k8q_A 344 YHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred cEEecCCCCceEEEecCCcHHHHHHHHHHHhcc
Confidence 9999999999996 8999999999999974
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=218.98 Aligned_cols=229 Identities=17% Similarity=0.196 Sum_probs=156.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEch
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSm 125 (315)
.+++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|.......+....++++.++++.++.++++|+||||
T Consensus 17 ~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~lvG~S~ 95 (267)
T 3fla_A 17 PDARARLVCLPHAGGSAS-FFFPLAKALAPAVEVLAVQYPGRQDRRHEPPVDSIGGLTNRLLEVLRPFGDRPLALFGHSM 95 (267)
T ss_dssp TTCSEEEEEECCTTCCGG-GGHHHHHHHTTTEEEEEECCTTSGGGTTSCCCCSHHHHHHHHHHHTGGGTTSCEEEEEETH
T ss_pred CCCCceEEEeCCCCCCch-hHHHHHHHhccCcEEEEecCCCCCCCCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCh
Confidence 456789999999999875 6999999998889999999999999976555667777889999999999999999999999
Q ss_pred hHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 126 GGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 126 GG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
||.+|+.+|.++|++ +.+++++++........ ..... .....+...+.... . .+
T Consensus 96 Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~--~~~~~-------------~~~~~~~~~~~~~~-~------~~ 153 (267)
T 3fla_A 96 GAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRD--DDVRG-------------ASDERLVAELRKLG-G------SD 153 (267)
T ss_dssp HHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCC--SCTTC-------------CCHHHHHHHHHHTC-H------HH
T ss_pred hHHHHHHHHHhhhhhccccccEEEECCCCccccccc--hhhcc-------------cchHHHHHHHHHhc-C------cc
Confidence 999999999999987 89998886554322110 00000 00001111110000 0 00
Q ss_pred cchh--HHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCC
Q 021229 202 SCLL--SDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 202 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~g 279 (315)
.... .++......... .......... . ....++++|+|+|+|++|.++|.+..+.+.+.++.+++++++++ |
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g-g 227 (267)
T 3fla_A 154 AAMLADPELLAMVLPAIR-SDYRAVETYR---H-EPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTGPADLRVLPG-G 227 (267)
T ss_dssp HHHHHSHHHHHHHHHHHH-HHHHHHHHCC---C-CTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSSCEEEEEESS-S
T ss_pred hhhccCHHHHHHHHHHHH-HHHHhhhccc---c-cccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCCceEEEecC-C
Confidence 0000 001111100000 0111111111 1 11267899999999999999999999999998843489999998 9
Q ss_pred CccccCChHHHHHHHHHHHhcCCC
Q 021229 280 HAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 280 H~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
|+++.++|+++++.|.+||++...
T Consensus 228 H~~~~~~~~~~~~~i~~fl~~~~~ 251 (267)
T 3fla_A 228 HFFLVDQAAPMIATMTEKLAGPAL 251 (267)
T ss_dssp TTHHHHTHHHHHHHHHHHTC----
T ss_pred ceeeccCHHHHHHHHHHHhccccc
Confidence 999999999999999999986644
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=214.89 Aligned_cols=244 Identities=15% Similarity=0.183 Sum_probs=166.5
Q ss_pred eeeeeec---CCCceEEEEEecCCCCCCCcEEEEccCCCChh-hhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCc
Q 021229 25 RSSVTDL---QDGSVMHCWVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSE 99 (315)
Q Consensus 25 ~~~~~~~---~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~-~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~ 99 (315)
...++++ .||..++|+...+.++.+|+|||+||++++.. +.+..+...+. .+|+|+++|+||||.|.......+.
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 89 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGAFRDGTI 89 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSSTTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSCGGGCCH
T ss_pred CcceEEEeeccCcceEEEEeccCCCCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCccccccH
Confidence 3344444 67888999865433334789999999988753 22333566663 4699999999999999765555667
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHh---hh---hhhceeEEeeCCCccCchhhhhhhhcccchhhhhh
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ---FK---EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASK 173 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~---~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (315)
..+++++.++++.++.++++|+||||||.+|+.++.+ +| ++|+++|++++........ ...
T Consensus 90 ~~~~~d~~~~~~~l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~----~~~--------- 156 (270)
T 3llc_A 90 SRWLEEALAVLDHFKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDL----IEP--------- 156 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHT----TGG---------
T ss_pred HHHHHHHHHHHHHhccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhh----hhh---------
Confidence 7778999999999999999999999999999999999 99 8999999997765322110 000
Q ss_pred hccCCCchHHHHHHHhhhccC-CCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCC
Q 021229 174 ILVPQSPGKLKELMRYTFFKR-PPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQ 252 (315)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 252 (315)
.........+........ ......+......+..... .......+.++++|+++|+|++|.
T Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~P~l~i~g~~D~ 218 (270)
T 3llc_A 157 ---LLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGR---------------ANRVMAGMIDTGCPVHILQGMADP 218 (270)
T ss_dssp ---GCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHH---------------HTCCTTSCCCCCSCEEEEEETTCS
T ss_pred ---hhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhh---------------hhhhhhhhhcCCCCEEEEecCCCC
Confidence 000111111111111110 0100011111222211110 011234567889999999999999
Q ss_pred CCchHHHHHHHhhcCCC--cEEEEEcCCCCccc-cCChHHHHHHHHHHHhc
Q 021229 253 IFPLELGRRLKSHLGDN--AQLIVIKKAGHAFN-YEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 253 ~~~~~~~~~l~~~~~~~--~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~ 300 (315)
++|.+.++.+.+.+ ++ +++++++++||+.. .+.++++.+.|.+||++
T Consensus 219 ~v~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 219 DVPYQHALKLVEHL-PADDVVLTLVRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp SSCHHHHHHHHHTS-CSSSEEEEEETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHhc-CCCCeeEEEeCCCcccccccccHHHHHHHHHHHhcC
Confidence 99999999999988 45 89999999999655 47789999999999975
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=233.33 Aligned_cols=266 Identities=18% Similarity=0.215 Sum_probs=167.0
Q ss_pred eeecCCCceEEEEEecCCC-------CCCCcEEEEccCCCChhhhHHhhHhhccc-----cc---eEEeecCCCCCCCCC
Q 021229 28 VTDLQDGSVMHCWVPKTRN-------DSKPDLVLIHGLGANALWQWTNIIPHMIH-----YF---NVYVPDLLFFGDSFT 92 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~-------~~~~~vvllHG~~~~~~~~w~~~~~~l~~-----~~---~vi~~D~~G~G~S~~ 92 (315)
++...||..++|+...+.+ +.+|+|||+||++++.. .|..+++.|.+ +| +|+++|+||||.|..
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~ 102 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV-VWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAV 102 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG-GGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH-HHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCC
Confidence 3445688899997654322 22378999999999886 69999999982 37 999999999999964
Q ss_pred CC-----CCCCchhHHHHHHHHHHHcC----CCc--eEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc------
Q 021229 93 TR-----PERSESFQAECVMRVMEAHS----VKK--LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE------ 155 (315)
Q Consensus 93 ~~-----~~~~~~~~a~~~~~~l~~l~----~~~--v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~------ 155 (315)
.. ...+...+++++.++++.+. .++ ++|+||||||.+++.+|.++|++|+++|++++......
T Consensus 103 ~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 182 (398)
T 2y6u_A 103 RNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGR 182 (398)
T ss_dssp HTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCC
T ss_pred CCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccccccc
Confidence 32 23455667889999998743 444 99999999999999999999999999999987554311
Q ss_pred hhhhhhh--hcccchhhhhhhccC--CCchHHHHHHHh-hhccCCCCCCCCcchhHHHHHHHHHHH--------------
Q 021229 156 QDLRDRM--FKVSDLEEASKILVP--QSPGKLKELMRY-TFFKRPPLSLVPSCLLSDYIDAMCTEY-------------- 216 (315)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 216 (315)
....... ............... .....+...+.. .++.. ........+........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2y6u_A 183 PGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTN-----AHSQILQNIIDFERTKASGDDEDGGPVRTKM 257 (398)
T ss_dssp TTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTT-----SCHHHHHHHHHHHEEC--------CCEEESS
T ss_pred ccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCccccc-----CCHHHHHHHHHhcCccccccccCCCceEecC
Confidence 0000000 000000000000000 001111111111 01100 11111111111000000
Q ss_pred -HHHHHHhhhccC--ccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHH
Q 021229 217 -LEEKRELVRAIP--KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKH 293 (315)
Q Consensus 217 -~~~~~~~~~~~~--~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~ 293 (315)
.......+..+. .......+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.|+|+++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~ 336 (398)
T 2y6u_A 258 EQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTL-QNYHLDVIPGGSHLVNVEAPDLVIER 336 (398)
T ss_dssp CHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHC-SSEEEEEETTCCTTHHHHSHHHHHHH
T ss_pred CchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhC-CCceEEEeCCCCccchhcCHHHHHHH
Confidence 000000000000 00122456789999999999999999999999999998 68999999999999999999999999
Q ss_pred HHHHHhc
Q 021229 294 LKSFLLD 300 (315)
Q Consensus 294 i~~fl~~ 300 (315)
|.+||.+
T Consensus 337 i~~fl~~ 343 (398)
T 2y6u_A 337 INHHIHE 343 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999964
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=203.00 Aligned_cols=196 Identities=23% Similarity=0.461 Sum_probs=160.8
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHh--hHhhcccc-ceEEeecCCCCCCC---CCCCCCC
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTN--IIPHMIHY-FNVYVPDLLFFGDS---FTTRPER 97 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~--~~~~l~~~-~~vi~~D~~G~G~S---~~~~~~~ 97 (315)
+++.++++ +|..++++...+ .+++|+||++||++++.. .|.. +.+.|.+. |+|+++|+||+|.| .......
T Consensus 4 ~~~~~~~~-~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 80 (207)
T 3bdi_A 4 LQEEFIDV-NGTRVFQRKMVT-DSNRRSIALFHGYSFTSM-DWDKADLFNNYSKIGYNVYAPDYPGFGRSASSEKYGIDR 80 (207)
T ss_dssp CEEEEEEE-TTEEEEEEEECC-TTCCEEEEEECCTTCCGG-GGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCTTTCCTT
T ss_pred ceeEEEee-CCcEEEEEEEec-cCCCCeEEEECCCCCCcc-ccchHHHHHHHHhCCCeEEEEcCCcccccCcccCCCCCc
Confidence 45555665 677888654433 236789999999998886 5888 88888876 99999999999999 5544444
Q ss_pred -CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 98 -SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 98 -~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
.....++++.++++.++.++++++||||||.+++.++.++|+++++++++++.... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-------------~--------- 138 (207)
T 3bdi_A 81 GDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-------------S--------- 138 (207)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-------------G---------
T ss_pred chHHHHHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-------------c---------
Confidence 56667888999999999999999999999999999999999999999988654200 0
Q ss_pred CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch
Q 021229 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
. ...+.++++|+++++|++|.+++.
T Consensus 139 --------------------------~-----------------------------~~~~~~~~~p~l~i~g~~D~~~~~ 163 (207)
T 3bdi_A 139 --------------------------L-----------------------------KGDMKKIRQKTLLVWGSKDHVVPI 163 (207)
T ss_dssp --------------------------G-----------------------------HHHHTTCCSCEEEEEETTCTTTTH
T ss_pred --------------------------h-----------------------------hHHHhhccCCEEEEEECCCCccch
Confidence 0 001235679999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+..+.+.+.+ +++++++++++||..+.++|+++.+.|.+||++
T Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 164 ALSKEYASII-SGSRLEIVEGSGHPVYIEKPEEFVRITVDFLRN 206 (207)
T ss_dssp HHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhc-CCceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 9999999988 689999999999999999999999999999975
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=225.46 Aligned_cols=268 Identities=15% Similarity=0.152 Sum_probs=159.7
Q ss_pred eeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-------ceEEeecCCCCCCCCCCC--CC
Q 021229 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-------FNVYVPDLLFFGDSFTTR--PE 96 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-------~~vi~~D~~G~G~S~~~~--~~ 96 (315)
..++.+ +|..+||....+..+++++|||+||++++.. .|..+++.|.+. |+|+++|+||||.|+.+. ..
T Consensus 87 ~~~~~i-~g~~i~~~~~~~~~~~~~pllllHG~~~s~~-~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~~~~ 164 (408)
T 3g02_A 87 QFTTEI-EGLTIHFAALFSEREDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKD 164 (408)
T ss_dssp EEEEEE-TTEEEEEEEECCSCTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCSSSC
T ss_pred CEEEEE-CCEEEEEEEecCCCCCCCeEEEECCCCCcHH-HHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCCCCC
Confidence 334455 7899999887544456789999999999885 699999999863 799999999999998653 45
Q ss_pred CCchhHHHHHHHHHHHcCCC-ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccC-c---hhhhh----hhhcccc
Q 021229 97 RSESFQAECVMRVMEAHSVK-KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE-E---QDLRD----RMFKVSD 167 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~~l~~~-~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~-~---~~~~~----~~~~~~~ 167 (315)
.+...+++++.++++.++.+ +++|+||||||.|++.+|.++|+.+..++.+.+..... . ..+.. .......
T Consensus 165 ~~~~~~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~ 244 (408)
T 3g02_A 165 FGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMSAPPEGPSIESLSAAEKEGIARMEK 244 (408)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCCCTTCCCGGGSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCCCCcccccccCCCHHHHHHHHHHHH
Confidence 66777899999999999997 99999999999999999999976444443332222110 0 00000 0000000
Q ss_pred hhh--------------hhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHH----HHHHHHHHHHhhhccCc
Q 021229 168 LEE--------------ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM----CTEYLEEKRELVRAIPK 229 (315)
Q Consensus 168 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 229 (315)
... ........++..+..++...+..-.. ...-..+.+... ...........+.....
T Consensus 245 ~~~~~~~y~~~~~t~p~tl~~~l~dsP~gl~awi~ek~~~w~d----~~~~~d~ll~~v~~y~~t~~~~~s~~~y~e~~~ 320 (408)
T 3g02_A 245 FMTDGYAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVD----KPLPSETILEMVSLYWLTESFPRAIHTYREWVP 320 (408)
T ss_dssp HHHHSCHHHHHHHHCHHHHHHHHHSCHHHHHHHHHHHHHHSCS----SCCCHHHHHHHHHHHHHTTHHHHHGGGHHHHTT
T ss_pred HHHhCcchhhhhcCcHHHHHHHHhcChHHHHhhhhhhhhhccC----CCCCHHHHHHHHHHHHhhccchhHHHHHHhhcc
Confidence 000 00000001111111111111111000 000111111110 11111111111111111
Q ss_pred cccc-------cccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 230 DRKI-------SNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 230 ~~~~-------~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.... ..+..+++|+++++|.+|.+.++.. +.+...+..++.+++++||++++|+|+.+++.|.+|+.+..
T Consensus 321 ~~~~~~~~~~~~~l~~i~vPt~v~~~~~D~~~~p~~---~~~~~~~~~~~~~~~~gGHf~~lE~Pe~~~~~l~~fl~~~~ 397 (408)
T 3g02_A 321 TASAPNGATPYQKELYIHKPFGFSFFPKDLVPVPRS---WIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQVW 397 (408)
T ss_dssp C-------CTTTTTTCEEEEEEEEECTBSSSCCCHH---HHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccCCCcCCCEEEEeCCcccccCcHH---HHHhcCCeeEEEECCCCcCchhhhCHHHHHHHHHHHHHHHH
Confidence 1111 1456789999999999997776653 22222234788999999999999999999999999997543
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=216.55 Aligned_cols=222 Identities=16% Similarity=0.102 Sum_probs=148.9
Q ss_pred CcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc-CCCceEEEEEchhHH
Q 021229 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH-SVKKLSLVGLSYGGF 128 (315)
Q Consensus 50 ~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l-~~~~v~lvGhSmGG~ 128 (315)
++|||+||++++.. .|..+++.|.++|+|+++|+||||.|.......+...+++++.++++.+ +.++++|+||||||.
T Consensus 52 ~~lvllHG~~~~~~-~~~~l~~~L~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~~~~~~~~~lvG~S~Gg~ 130 (280)
T 3qmv_A 52 LRLVCFPYAGGTVS-AFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGAL 130 (280)
T ss_dssp EEEEEECCTTCCGG-GGTTHHHHHCTTEEEEECCCTTSGGGTTSCCCCSHHHHHHHHHHHHHHTTCSSSEEEEEETHHHH
T ss_pred ceEEEECCCCCChH-HHHHHHHhcCCCceEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCHhHH
Confidence 68999999999886 6999999999899999999999999976656667777899999999999 789999999999999
Q ss_pred HHHHHHHhhhhhhc----eeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcch
Q 021229 129 VGYSMAAQFKEKIE----KVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 129 ia~~~a~~~p~~v~----~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (315)
+|+.+|.++|+++. .++++++........ ..... .....+...+.......... ......
T Consensus 131 va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~--~~~~~-------------~~~~~~~~~~~~~~~~~~~~-~~~~~~ 194 (280)
T 3qmv_A 131 LAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGD--RADHT-------------LSDTALREVIRDLGGLDDAD-TLGAAY 194 (280)
T ss_dssp HHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSC--CCGGG-------------SCHHHHHHHHHHHTCCC----------
T ss_pred HHHHHHHHHHHcCCCCceEEEEECCCCCCCcCc--ccccc-------------cCHHHHHHHHHHhCCCChhh-hcCHHH
Confidence 99999999999887 666655433211100 00000 00111111111110000000 000000
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~ 284 (315)
...+...+.. ........ ....+.++++|+|+|+|++|.+++.+..+.+.+.++...++++++ +||+++.
T Consensus 195 ~~~~~~~~~~-----~~~~~~~~----~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~-ggH~~~~ 264 (280)
T 3qmv_A 195 FDRRLPVLRA-----DLRACERY----DWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLP-GNHFFLN 264 (280)
T ss_dssp CCTTHHHHHH-----HHHHHHTC----CCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSSCEEEEEEE-EETTGGG
T ss_pred HHHHHHHHHH-----HHHHHHhc----cccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCCceEEEEec-CCCeEEc
Confidence 0000010000 00111111 112356889999999999999999999999988884345777776 5999999
Q ss_pred --CChHHHHHHHHHHH
Q 021229 285 --EKPKEFYKHLKSFL 298 (315)
Q Consensus 285 --e~p~~~~~~i~~fl 298 (315)
++|+++++.|.+||
T Consensus 265 ~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 265 GGPSRDRLLAHLGTEL 280 (280)
T ss_dssp SSHHHHHHHHHHHTTC
T ss_pred CchhHHHHHHHHHhhC
Confidence 89999999999885
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-30 Score=217.26 Aligned_cols=240 Identities=13% Similarity=0.143 Sum_probs=162.2
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
.++.+.+ +|..++|.. +++|+|||+||++++.. .|..+++.|.+ +|+|+++|+||||.|.......+....+
T Consensus 22 ~~~~~~~-~g~~~~~~~-----g~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~ 94 (270)
T 3rm3_A 22 SEQYPVL-SGAEPFYAE-----NGPVGVLLVHGFTGTPH-SMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWV 94 (270)
T ss_dssp CCSSCCC-TTCCCEEEC-----CSSEEEEEECCTTCCGG-GTHHHHHHHHHTTCEEEECCCTTCSSCHHHHHTCCHHHHH
T ss_pred CCCccCC-CCCcccccC-----CCCeEEEEECCCCCChh-HHHHHHHHHHHCCCEEEEeCCCCCCCCccccccCCHHHHH
Confidence 3334444 576666653 34689999999999886 59999999987 4999999999999996443445666678
Q ss_pred HHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 104 ECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 104 ~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
+++.++++.+. .++++|+||||||.+|+.+|.++|+ |+++|+++++....... .................+.
T Consensus 95 ~d~~~~i~~l~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--- 168 (270)
T 3rm3_A 95 ASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIA--AGMTGGGELPRYLDSIGSD--- 168 (270)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHH--HHSCC---CCSEEECCCCC---
T ss_pred HHHHHHHHHHHhhCCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccc--cchhcchhHHHHHHHhCcc---
Confidence 88999999887 8999999999999999999999999 99999998765432111 0000000000000000000
Q ss_pred HHHHHHHhhhccCC-CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHH
Q 021229 182 KLKELMRYTFFKRP-PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 182 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
..... ......... .......... .. .....+.++++|+|+|+|++|.++|.+..+
T Consensus 169 ---------~~~~~~~~~~~~~~~-~~~~~~~~~~----~~---------~~~~~~~~~~~P~lii~G~~D~~~~~~~~~ 225 (270)
T 3rm3_A 169 ---------LKNPDVKELAYEKTP-TASLLQLARL----MA---------QTKAKLDRIVCPALIFVSDEDHVVPPGNAD 225 (270)
T ss_dssp ---------CSCTTCCCCCCSEEE-HHHHHHHHHH----HH---------HHHHTGGGCCSCEEEEEETTCSSSCTTHHH
T ss_pred ---------ccccchHhhcccccC-hhHHHHHHHH----HH---------HHHhhhhhcCCCEEEEECCCCcccCHHHHH
Confidence 00000 000000000 1111111100 00 012345678999999999999999999999
Q ss_pred HHHhhcCCCc--EEEEEcCCCCccccCCh-HHHHHHHHHHHhcC
Q 021229 261 RLKSHLGDNA--QLIVIKKAGHAFNYEKP-KEFYKHLKSFLLDS 301 (315)
Q Consensus 261 ~l~~~~~~~~--~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 301 (315)
.+.+.+ ++. ++++++++||.++.+++ +++.+.|.+||++.
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 226 IIFQGI-SSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp HHHHHS-CCSSEEEEEESSCCSCGGGSTTHHHHHHHHHHHHHHH
T ss_pred HHHHhc-CCCcceEEEeCCCCcccccCccHHHHHHHHHHHHHhc
Confidence 999888 444 99999999999999987 89999999999864
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-30 Score=223.20 Aligned_cols=229 Identities=14% Similarity=0.113 Sum_probs=148.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcccc---ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEE
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHY---FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~---~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvG 122 (315)
.+++++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|..+. ..+....++++.++++.+ .++++|+|
T Consensus 33 ~~~~~~vvllHG~~~~~~-~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~~~-~~~~~~~~~~l~~~~~~~-~~~~~lvG 109 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRPL-WEQVQGFREAVVPIMAKA-PQGVHLIC 109 (302)
T ss_dssp --CCCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSCH-HHHHHHHHHHHHHHHHHC-TTCEEEEE
T ss_pred cCCCCeEEEECCCCCChh-HHHHHHHHHHhcCCCcEEEEeccCCCccchhhH-HHHHHHHHHHHHHHhhcC-CCcEEEEE
Confidence 345789999999999886 699999999875 999999999999986432 233444577788888877 78999999
Q ss_pred EchhHHHHHHHHHhhhh-hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCC-----
Q 021229 123 LSYGGFVGYSMAAQFKE-KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP----- 196 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 196 (315)
|||||.+|+.++.++|+ +|+++|+++++....... ..... . ....... ......++....
T Consensus 110 hS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~-~~~~~---------~-~~~~~~~---~~~~~~~~~~~~~~~~~ 175 (302)
T 1pja_A 110 YSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGD-TDYLK---------W-LFPTSMR---SNLYRICYSPWGQEFSI 175 (302)
T ss_dssp ETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSC-CHHHH---------H-HCTTCCH---HHHHHHHTSTTGGGSTG
T ss_pred ECHHHHHHHHHHHhcCccccCEEEEECCCccccccc-chhhh---------h-HHHHHHH---HHHhhccchHHHHHhhh
Confidence 99999999999999999 799999998654322110 00000 0 0000000 000000000000
Q ss_pred CC-CCCcchhHHHHHHHHHHHHHHHHHhhhccCc----cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCC--
Q 021229 197 LS-LVPSCLLSDYIDAMCTEYLEEKRELVRAIPK----DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN-- 269 (315)
Q Consensus 197 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~-- 269 (315)
.. +........+.. ..... ..+..... .+....+.+++ |+++|+|++|.++|++.++.+.+.. ++
T Consensus 176 ~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~-~~~~ 247 (302)
T 1pja_A 176 CNYWHDPHHDDLYLN--ASSFL----ALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYD-ANET 247 (302)
T ss_dssp GGGBCCTTCHHHHHH--HCSSH----HHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEEC-TTCC
T ss_pred hhcccChhhhhhhhc--cchHH----HHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcC-Cccc
Confidence 00 000000111110 00000 00100000 00134567899 9999999999999998888776554 34
Q ss_pred -------------------------cEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 270 -------------------------AQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 270 -------------------------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+++++++++||+++.|+|++|++.|.+||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 302 (302)
T 1pja_A 248 VLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPWLS 302 (302)
T ss_dssp EECGGGSHHHHTTTTSHHHHHHTTCEEEEECSSCCTTTTTSCHHHHHHHTGGGCC
T ss_pred ccchhhhhhhhhhhhchhhHhhcCCeEEEEecCccccccccCHHHHHHHHHHhcC
Confidence 899999999999999999999999999974
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=205.54 Aligned_cols=196 Identities=18% Similarity=0.293 Sum_probs=156.9
Q ss_pred eeeeeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHh--hHhhcccc-ceEEeecCCCCCCCCCCCCCCCch
Q 021229 25 RSSVTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTN--IIPHMIHY-FNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~--~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
...++++ +|.+++|+...+ +++++|+|||+||++++.. .|.. +.+.|.+. |+|+++|+||||.|..........
T Consensus 8 ~~~~~~~-~g~~l~~~~~~p~~~~~~~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~ 85 (210)
T 1imj_A 8 REGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIG 85 (210)
T ss_dssp CCCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTT
T ss_pred ccceEee-CCeEEEEEEeCCCCCCCCceEEEECCCCCccc-eeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCcchhh
Confidence 3345555 688888877533 2346789999999998886 5887 47788765 999999999999997654333444
Q ss_pred hHH--HHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 101 FQA--ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 101 ~~a--~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
..+ +++.++++.++.++++|+||||||.+++.++.++|++++++|++++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------------ 141 (210)
T 1imj_A 86 ELAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK------------------------ 141 (210)
T ss_dssp SCCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG------------------------
T ss_pred hcchHHHHHHHHHHhCCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc------------------------
Confidence 444 788999999999999999999999999999999999999999886542100
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
. . ...+.++++|+++++|++|. ++.+.
T Consensus 142 ---------------~-~------------------------------------~~~~~~~~~p~l~i~g~~D~-~~~~~ 168 (210)
T 1imj_A 142 ---------------I-N------------------------------------AANYASVKTPALIVYGDQDP-MGQTS 168 (210)
T ss_dssp ---------------S-C------------------------------------HHHHHTCCSCEEEEEETTCH-HHHHH
T ss_pred ---------------c-c------------------------------------chhhhhCCCCEEEEEcCccc-CCHHH
Confidence 0 0 00123568999999999999 99999
Q ss_pred HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 259 ~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+.+ +.+ +++++.+++++||.++.++|+++.+.|.+|+++.
T Consensus 169 ~~~~-~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 169 FEHL-KQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQGL 209 (210)
T ss_dssp HHHH-TTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHTC
T ss_pred HHHH-hhC-CCCCEEEecCCCcchhhcCHHHHHHHHHHHHHhc
Confidence 9999 777 6899999999999999999999999999999864
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=204.59 Aligned_cols=222 Identities=14% Similarity=0.145 Sum_probs=150.5
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCC-CCC-CchhHHHHHHHHHHHcCC--CceEEE
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTR-PER-SESFQAECVMRVMEAHSV--KKLSLV 121 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~-~~~-~~~~~a~~~~~~l~~l~~--~~v~lv 121 (315)
+++++|||+||++++.. .|..+.+.|.+. |+|+++|+||||.|.... ... +.....+++.++++.+.. ++++|+
T Consensus 20 ~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~l~ 98 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPN-DMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMTAKYAKVFVF 98 (251)
T ss_dssp CSSEEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHHCCHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCceEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCcccHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 35679999999999886 699999999855 999999999999995321 111 344456677777776654 499999
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
||||||.+++.+|.++|+.+++++++++............ . .+...+.......+
T Consensus 99 G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~------ 153 (251)
T 3dkr_A 99 GLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF-L------------------KYAEYMNRLAGKSD------ 153 (251)
T ss_dssp ESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH-H------------------HHHHHHHHHHTCCC------
T ss_pred EechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH-H------------------HHHHHHHhhcccCc------
Confidence 9999999999999999999999988766554322111100 0 00011111111110
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC--CcEEEEEcCCC
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD--NAQLIVIKKAG 279 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~--~~~~~~i~~~g 279 (315)
....+ ................ .....+.++++|+|+|+|++|.++|.+..+.+.+.++. +.++++++++|
T Consensus 154 --~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 225 (251)
T 3dkr_A 154 --ESTQI-LAYLPGQLAAIDQFAT-----TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINAARVDFHWYDDAK 225 (251)
T ss_dssp --CHHHH-HHHHHHHHHHHHHHHH-----HHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTCSCEEEEEETTCC
T ss_pred --chhhH-HhhhHHHHHHHHHHHH-----HHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 00001 1000000111111100 01234667899999999999999999999999988843 34999999999
Q ss_pred CccccCC-hHHHHHHHHHHHhcCC
Q 021229 280 HAFNYEK-PKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 280 H~~~~e~-p~~~~~~i~~fl~~~~ 302 (315)
|.++.+. |+++.+.|.+||++..
T Consensus 226 H~~~~~~~~~~~~~~i~~fl~~~~ 249 (251)
T 3dkr_A 226 HVITVNSAHHALEEDVIAFMQQEN 249 (251)
T ss_dssp SCTTTSTTHHHHHHHHHHHHHTTC
T ss_pred cccccccchhHHHHHHHHHHHhhc
Confidence 9999986 9999999999998754
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=207.96 Aligned_cols=255 Identities=16% Similarity=0.166 Sum_probs=150.2
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHH----------------hhHhhcccc-ceEEeecCCCCCCCCCCCC
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWT----------------NIIPHMIHY-FNVYVPDLLFFGDSFTTRP 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~----------------~~~~~l~~~-~~vi~~D~~G~G~S~~~~~ 95 (315)
+|..++++... .+++|+|||+||++++.. .|. .+.+.|.+. |+|+++|+||||.|.....
T Consensus 36 ~~~~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~ 112 (354)
T 2rau_A 36 DIISLHKVNLI--GGGNDAVLILPGTWSSGE-QLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKD 112 (354)
T ss_dssp CEEEEEEEEET--TCCEEEEEEECCTTCCHH-HHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCG
T ss_pred CceEEEeeccc--CCCCCEEEEECCCCCCcc-ccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccc
Confidence 44566666542 345789999999998874 344 788888764 9999999999999975432
Q ss_pred -------CCCchhHHHHHHHHHHH----cCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCc-hhhhhhh
Q 021229 96 -------ERSESFQAECVMRVMEA----HSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEE-QDLRDRM 162 (315)
Q Consensus 96 -------~~~~~~~a~~~~~~l~~----l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~-~~~~~~~ 162 (315)
..+....++++.++++. ++.++++|+||||||.+++.+|.++ |++|+++|++++.+.... ......
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~- 191 (354)
T 2rau_A 113 RQLSFTANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYT- 191 (354)
T ss_dssp GGGGGGTTCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCC-
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhh-
Confidence 34445567777777776 5889999999999999999999999 999999999965433210 000000
Q ss_pred hcccchhhhhhh-----------------------ccCC---CchHHHHHHHhhhcc---CCCCCCCCcchhHHHHHHHH
Q 021229 163 FKVSDLEEASKI-----------------------LVPQ---SPGKLKELMRYTFFK---RPPLSLVPSCLLSDYIDAMC 213 (315)
Q Consensus 163 ~~~~~~~~~~~~-----------------------~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 213 (315)
............ ..+. ........+....+. ..+. ..+......+...+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 270 (354)
T 2rau_A 192 PEVNSIEEMEAKGIYVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPY-DYPYSKKEDMFPILA 270 (354)
T ss_dssp CSCSSHHHHHHHTCCEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTT-STTCCCHHHHHHHHH
T ss_pred hhhhhHHHhhhhcccccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcc-cCCCccHHHHHHHHh
Confidence 000000000000 0000 000011111110000 0000 000111111111000
Q ss_pred HHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCCh---HHH
Q 021229 214 TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP---KEF 290 (315)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p---~~~ 290 (315)
.... ......+...+....+.++++|+|+|+|++|.++|.. + +.+.+++++++++++||++++++| +++
T Consensus 271 ~~~~---~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~-~----~~l~~~~~~~~~~~~gH~~~~~~~~~~~~~ 342 (354)
T 2rau_A 271 SFDP---YWPYRLSLERDLKFDYEGILVPTIAFVSERFGIQIFD-S----KILPSNSEIILLKGYGHLDVYTGENSEKDV 342 (354)
T ss_dssp TSCS---EEEHHHHHTTTCCCCCTTCCCCEEEEEETTTHHHHBC-G----GGSCTTCEEEEETTCCGGGGTSSTTHHHHT
T ss_pred hhcc---ccccccccCcccccccccCCCCEEEEecCCCCCCccc-h----hhhccCceEEEcCCCCCchhhcCCCcHHHH
Confidence 0000 0000000111234567789999999999999987643 2 233368899999999999988776 999
Q ss_pred HHHHHHHHhc
Q 021229 291 YKHLKSFLLD 300 (315)
Q Consensus 291 ~~~i~~fl~~ 300 (315)
++.|.+||++
T Consensus 343 ~~~i~~fl~~ 352 (354)
T 2rau_A 343 NSVVLKWLSQ 352 (354)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=202.09 Aligned_cols=219 Identities=12% Similarity=0.161 Sum_probs=131.7
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC---CceEEEE
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV---KKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~---~~v~lvG 122 (315)
.+++++|||+||+++++. .|.++++.|.++|+|+++|+||||.|.... ....++.+.++++++++ ++++|+|
T Consensus 10 ~~~~~~lv~lhg~g~~~~-~~~~~~~~L~~~~~vi~~Dl~GhG~S~~~~----~~~~~~~~~~~~~~l~~~~~~~~~lvG 84 (242)
T 2k2q_B 10 ASEKTQLICFPFAGGYSA-SFRPLHAFLQGECEMLAAEPPGHGTNQTSA----IEDLEELTDLYKQELNLRPDRPFVLFG 84 (242)
T ss_dssp TTCCCEEESSCCCCHHHH-HHHHHHHHHCCSCCCEEEECCSSCCSCCCT----TTHHHHHHHHTTTTCCCCCCSSCEEEC
T ss_pred CCCCceEEEECCCCCCHH-HHHHHHHhCCCCeEEEEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHhhcCCCEEEEe
Confidence 456779999999998875 699999999989999999999999996421 12334444455556665 6899999
Q ss_pred EchhHHHHHHHHHhhhh---hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC---CCchHHHHHHHhhhccCCC
Q 021229 123 LSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP---QSPGKLKELMRYTFFKRPP 196 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 196 (315)
|||||.||+.+|.++++ ....+++.+......... ....... ......+.. ........ ......
T Consensus 85 hSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 155 (242)
T 2k2q_B 85 HSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRK---KVSHLPD-DQFLDHIIQLGGMPAELVEN---KEVMSF-- 155 (242)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSC---CCSSCTT-HHHHHTTCCTTCCCCTTTHH---HHTTTT--
T ss_pred CCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcc---cccCCCH-HHHHHHHHHhCCCChHHhcC---HHHHHH--
Confidence 99999999999998542 133444433211110000 0000000 000000000 00000000 000000
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEc
Q 021229 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIK 276 (315)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~ 276 (315)
.......+ ..... ... ...+.++++|+|+|+|++|.+++ ...+.+.+.. ++.++++++
T Consensus 156 ---~~~~~~~~-------------~~~~~---~~~-~~~l~~i~~P~lvi~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~ 213 (242)
T 2k2q_B 156 ---FLPSFRSD-------------YRALE---QFE-LYDLAQIQSPVHVFNGLDDKKCI-RDAEGWKKWA-KDITFHQFD 213 (242)
T ss_dssp ---CCSCHHHH-------------HHHHT---CCC-CSCCTTCCCSEEEEEECSSCCHH-HHHHHHHTTC-CCSEEEEEE
T ss_pred ---HHHHHHHH-------------HHHHH---hcc-cCCCCccCCCEEEEeeCCCCcCH-HHHHHHHHHh-cCCeEEEEe
Confidence 00000000 00111 111 11267899999999999999875 4455666666 577888897
Q ss_pred CCCCccccCChHHHHHHHHHHHhcC
Q 021229 277 KAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 277 ~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+||+++.|+|++|++.|.+||++.
T Consensus 214 -~gH~~~~e~p~~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 214 -GGHMFLLSQTEEVAERIFAILNQH 237 (242)
T ss_dssp -CCCSHHHHHCHHHHHHHHHHHHTT
T ss_pred -CCceeEcCCHHHHHHHHHHHhhcc
Confidence 599999999999999999999753
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=194.31 Aligned_cols=197 Identities=15% Similarity=0.133 Sum_probs=147.4
Q ss_pred eeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCCh----hhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCch
Q 021229 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANA----LWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~----~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
+.++...+| .+.++...+.++..|+||++||++... ...|..+...|.+. |.|+++|+||+|.|..... ....
T Consensus 25 ~~~~~~~~g-~l~~~~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~~-~~~~ 102 (249)
T 2i3d_A 25 EVIFNGPAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD-HGAG 102 (249)
T ss_dssp EEEEEETTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCC-SSHH
T ss_pred EEEEECCCc-eEEEEEEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-Cccc
Confidence 555666777 677766554445677899999974321 12467778888664 9999999999999965432 2222
Q ss_pred hHHHHHHHHHHHc---C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 101 FQAECVMRVMEAH---S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 101 ~~a~~~~~~l~~l---~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
. .+++.++++.+ . .++++|+||||||.+++.++.++|+ ++++|++++.....
T Consensus 103 ~-~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~--------------------- 159 (249)
T 2i3d_A 103 E-LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY--------------------- 159 (249)
T ss_dssp H-HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS---------------------
T ss_pred h-HHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhh---------------------
Confidence 2 25555555544 2 2479999999999999999999998 99999876532100
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
. ...+.++++|+++++|++|.++|
T Consensus 160 -----------------~---------------------------------------~~~~~~~~~P~lii~G~~D~~~~ 183 (249)
T 2i3d_A 160 -----------------D---------------------------------------FSFLAPCPSSGLIINGDADKVAP 183 (249)
T ss_dssp -----------------C---------------------------------------CTTCTTCCSCEEEEEETTCSSSC
T ss_pred -----------------h---------------------------------------hhhhcccCCCEEEEEcCCCCCCC
Confidence 0 01234678999999999999999
Q ss_pred hHHHHHHHhhcCC----CcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 256 LELGRRLKSHLGD----NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 256 ~~~~~~l~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
.+..+.+.+.++. ++++++++++||.+. ++++++.+.|.+||.+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 184 EKDVNGLVEKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp HHHHHHHHHHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhccCCceeEEEECCCCcccc-cCHHHHHHHHHHHHHHhcCC
Confidence 9999999888842 789999999999988 89999999999999876543
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=191.94 Aligned_cols=211 Identities=20% Similarity=0.168 Sum_probs=150.9
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCC-------
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERS------- 98 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~------- 98 (315)
.++++ +|..+.++.+. + .+|+|||+||++++.. .|..+...|.+. |.|+++|+||||.|........
T Consensus 6 ~~~~~-~g~~~~~~~~~--~-~~~~vv~~hG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 80 (238)
T 1ufo_A 6 ERLTL-AGLSVLARIPE--A-PKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEE 80 (238)
T ss_dssp EEEEE-TTEEEEEEEES--S-CCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHHH
T ss_pred ccccc-CCEEEEEEecC--C-CccEEEEECCCcccch-HHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhhh
Confidence 44555 56666666552 2 6789999999999886 598888888765 9999999999999975443332
Q ss_pred ----chhHHHHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 99 ----ESFQAECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 99 ----~~~~a~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
.....+++.++++.+ +.++++++||||||.+++.++.++|+.+.+++++++....... ...+
T Consensus 81 ~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~-------- 149 (238)
T 1ufo_A 81 VYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLP---QGQV-------- 149 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCC---TTCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhh---hhhc--------
Confidence 223355555555543 5589999999999999999999999988888877544321110 0000
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC-CCCeEEEEeCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI-TQPTLILWGEH 250 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lvi~G~~ 250 (315)
..+.. . .. +. .......+.++ ++|+++++|++
T Consensus 150 ---------------------------~~~~~----~-~~------------~~---~~~~~~~~~~~~~~P~l~i~g~~ 182 (238)
T 1ufo_A 150 ---------------------------VEDPG----V-LA------------LY---QAPPATRGEAYGGVPLLHLHGSR 182 (238)
T ss_dssp ---------------------------CCCHH----H-HH------------HH---HSCGGGCGGGGTTCCEEEEEETT
T ss_pred ---------------------------cCCcc----c-ch------------hh---cCChhhhhhhccCCcEEEEECCC
Confidence 01110 0 00 00 00122345567 89999999999
Q ss_pred CCCCchHHHHHHHhhcCC-----CcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 251 DQIFPLELGRRLKSHLGD-----NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|.++|.+.++.+.+.++. ++++++++++||.++.+.++++.+.|.+|+..
T Consensus 183 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 183 DHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp CTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred CCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 999999999999888831 78999999999999999999999999888864
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=186.33 Aligned_cols=194 Identities=15% Similarity=0.198 Sum_probs=142.4
Q ss_pred eeeeeeecCCCceEEEEEecCCC-CCCCcEEEEccC-----CCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRN-DSKPDLVLIHGL-----GANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE 96 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~-~~~~~vvllHG~-----~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 96 (315)
.+..++...+| +++++...+.+ ++.|+||++||+ +.+.. .|..+...|.+ +|+|+++|+||+|.|......
T Consensus 6 ~~~~~~~~~~g-~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~ 83 (208)
T 3trd_A 6 NEDFLIQGPVG-QLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNK-VVTTLAKALDELGLKTVRFNFRGVGKSQGRYDN 83 (208)
T ss_dssp SSCEEEECSSS-EEEEEEECCSSCCCSEEEEEECSCGGGTCCTTCH-HHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCT
T ss_pred cceEEEECCCc-eEEEEEEcCCCCCCCCEEEEEcCCCCCCCccCCc-hHHHHHHHHHHCCCEEEEEecCCCCCCCCCccc
Confidence 44456777788 88887765433 367899999994 23333 47788888876 499999999999999754221
Q ss_pred C-C-chhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhh
Q 021229 97 R-S-ESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKI 174 (315)
Q Consensus 97 ~-~-~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
. . ..+....+..+.+..+.++++|+||||||.+++.++ .+| +++++|++++....
T Consensus 84 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~--------------------- 140 (208)
T 3trd_A 84 GVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY--------------------- 140 (208)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS---------------------
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc---------------------
Confidence 1 1 111222233333344668999999999999999999 777 89999987654300
Q ss_pred ccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCC
Q 021229 175 LVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIF 254 (315)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 254 (315)
+ ....+..+++|+++++|++|.++
T Consensus 141 ----------------~----------------------------------------~~~~~~~~~~p~l~i~g~~D~~~ 164 (208)
T 3trd_A 141 ----------------E----------------------------------------GFASLTQMASPWLIVQGDQDEVV 164 (208)
T ss_dssp ----------------G----------------------------------------GGTTCCSCCSCEEEEEETTCSSS
T ss_pred ----------------C----------------------------------------CchhhhhcCCCEEEEECCCCCCC
Confidence 0 00123345899999999999999
Q ss_pred chHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 255 PLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 255 ~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
|.+..+.+.+.++.+.++++++++||.+..+. +++.+.|.+||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl~ 208 (208)
T 3trd_A 165 PFEQVKAFVNQISSPVEFVVMSGASHFFHGRL-IELRELLVRNLA 208 (208)
T ss_dssp CHHHHHHHHHHSSSCCEEEEETTCCSSCTTCH-HHHHHHHHHHHC
T ss_pred CHHHHHHHHHHccCceEEEEeCCCCCcccccH-HHHHHHHHHHhC
Confidence 99999999988854599999999999998765 899999999984
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-27 Score=188.23 Aligned_cols=181 Identities=15% Similarity=0.151 Sum_probs=135.7
Q ss_pred CCCcEEEEccCCCCh--hhhHHh-hHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC-CceEEE
Q 021229 48 SKPDLVLIHGLGANA--LWQWTN-IIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV-KKLSLV 121 (315)
Q Consensus 48 ~~~~vvllHG~~~~~--~~~w~~-~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~-~~v~lv 121 (315)
++|+|||+||++++. ...|.. +.+.|.+ +|+|+++|+||++.. ..++++..+++.++. ++++|+
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~----------~~~~~~~~~~~~l~~~~~~~lv 72 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA----------RESIWLPFMETELHCDEKTIII 72 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC----------CHHHHHHHHHHTSCCCTTEEEE
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc----------cHHHHHHHHHHHhCcCCCEEEE
Confidence 467999999999883 124666 7788887 799999999986421 246778888899998 899999
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
||||||.+++.+|.++| |+++|++++........ . +.. ..++..+.
T Consensus 73 G~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~-~-------------------------~~~-~~~~~~~~----- 118 (194)
T 2qs9_A 73 GHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDE-N-------------------------ERA-SGYFTRPW----- 118 (194)
T ss_dssp EETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCH-H-------------------------HHH-TSTTSSCC-----
T ss_pred EcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchh-h-------------------------hHH-Hhhhcccc-----
Confidence 99999999999999999 99999987654221100 0 000 01111100
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
.. ..+..+.+|+++|+|++|.++|.+.++.+.+.+ ++++.+++++||+
T Consensus 119 --~~----------------------------~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~--~~~~~~~~~~gH~ 166 (194)
T 2qs9_A 119 --QW----------------------------EKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL--ETKLHKFTDCGHF 166 (194)
T ss_dssp --CH----------------------------HHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEESSCTTS
T ss_pred --cH----------------------------HHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc--CCeEEEeCCCCCc
Confidence 00 011234579999999999999999999999887 6799999999999
Q ss_pred cccCChHHHHHHHHHHHhcCCCCC
Q 021229 282 FNYEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 282 ~~~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
++.|+|+.+++.+ +||++....+
T Consensus 167 ~~~~~p~~~~~~~-~fl~~~~~~~ 189 (194)
T 2qs9_A 167 QNTEFHELITVVK-SLLKVPALEH 189 (194)
T ss_dssp CSSCCHHHHHHHH-HHHTCCCCCC
T ss_pred cchhCHHHHHHHH-HHHHhhhhhh
Confidence 9999999998776 9998765543
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=195.82 Aligned_cols=220 Identities=14% Similarity=0.119 Sum_probs=144.6
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEEc
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGLS 124 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhS 124 (315)
.+.+++|||+||++++.. .|..+.+ |..+|+|+++|+||+|.+.. +..+...+++++.++++.+. .++++|+|||
T Consensus 18 ~~~~~~lv~lhg~~~~~~-~~~~~~~-l~~~~~v~~~d~~G~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~l~GhS 93 (265)
T 3ils_A 18 MVARKTLFMLPDGGGSAF-SYASLPR-LKSDTAVVGLNCPYARDPEN--MNCTHGAMIESFCNEIRRRQPRGPYHLGGWS 93 (265)
T ss_dssp TTSSEEEEEECCTTCCGG-GGTTSCC-CSSSEEEEEEECTTTTCGGG--CCCCHHHHHHHHHHHHHHHCSSCCEEEEEET
T ss_pred CCCCCEEEEECCCCCCHH-HHHHHHh-cCCCCEEEEEECCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 345679999999999885 6999998 88889999999999976643 34566677888999999885 5689999999
Q ss_pred hhHHHHHHHHH---hhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhh--hccCCCCC-
Q 021229 125 YGGFVGYSMAA---QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT--FFKRPPLS- 198 (315)
Q Consensus 125 mGG~ia~~~a~---~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 198 (315)
|||.+|+++|. .+|++++++|++++.......... ....++.... +...+...
T Consensus 94 ~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 152 (265)
T 3ils_A 94 SGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLP---------------------RAFYEHCNSIGLFATQPGASP 152 (265)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCC---------------------HHHHHHHHHTTTTTTSSSSCS
T ss_pred HhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccC---------------------HHHHHHHHHHHHhCCCccccc
Confidence 99999999999 455669999999765432211000 0001111100 00000000
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeE-EEEeCC---CCCC--------------chHHHH
Q 021229 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTL-ILWGEH---DQIF--------------PLELGR 260 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l-vi~G~~---D~~~--------------~~~~~~ 260 (315)
.........+...+. ..+....... ......+++|++ +|+|++ |..+ +.....
T Consensus 153 ~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
T 3ils_A 153 DGSTEPPSYLIPHFT--------AVVDVMLDYK-LAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPD 223 (265)
T ss_dssp SSCSCCCTTHHHHHH--------HHHHHTTTCC-CCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCT
T ss_pred cCCHHHHHHHHHHHH--------HHHHHHHhcC-CCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcc
Confidence 000011111111111 1111111111 122357899988 999999 9988 444445
Q ss_pred HHHhhcC-CCcEEEEEcCCCCccc--cCChHHHHHHHHHHHh
Q 021229 261 RLKSHLG-DNAQLIVIKKAGHAFN--YEKPKEFYKHLKSFLL 299 (315)
Q Consensus 261 ~l~~~~~-~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~ 299 (315)
.+.+..+ +++++++++||||+++ .|+|+++++.|.+||+
T Consensus 224 ~w~~~~~~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 224 GWDTIMPGASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp THHHHSTTCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred hHHHhCCccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 5666664 4789999999999999 8999999999999984
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-26 Score=207.73 Aligned_cols=249 Identities=13% Similarity=0.139 Sum_probs=153.7
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhH--hhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNII--PHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~--~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
+|..+..+..+++++..|+|||+||++++.. .|.... ..+..+|+|+++|+||||.|......... ...+++.+++
T Consensus 143 ~~~~l~~~~~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~~~~~-~~~~d~~~~~ 220 (405)
T 3fnb_A 143 EGELLPGYAIISEDKAQDTLIVVGGGDTSRE-DLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGLHFEV-DARAAISAIL 220 (405)
T ss_dssp TTEEEEEEEECCSSSCCCEEEEECCSSCCHH-HHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTCCCCS-CTHHHHHHHH
T ss_pred CCeEEEEEEEcCCCCCCCEEEEECCCCCCHH-HHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCCCCCc-cHHHHHHHHH
Confidence 5667776665555555589999999988875 476555 45567899999999999999533222222 3367788888
Q ss_pred HHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 111 EAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 111 ~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
+.+.. ++++|+||||||.+++.++.++| +|+++|++++....... ......... ..+......+.
T Consensus 221 ~~l~~~~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~-~~~~~~~~~-----------~~p~~~~~~~~ 287 (405)
T 3fnb_A 221 DWYQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEV-FRISFSTAL-----------KAPKTILKWGS 287 (405)
T ss_dssp HHCCCSSSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHH-HHHHCC-------------------------
T ss_pred HHHHhcCCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHH-HHHhhhhhh-----------hCcHHHHHHHH
Confidence 88876 79999999999999999999999 89999887665432111 000000000 00000000000
Q ss_pred hhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc-
Q 021229 189 YTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL- 266 (315)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~- 266 (315)
.. ... ..... ........ ..........+..+........+.++++|+|+|+|++|.++|++.++.+.+.+
T Consensus 288 ~~-~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~ 360 (405)
T 3fnb_A 288 KL-VTS-----VNKVA-EVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFK 360 (405)
T ss_dssp -----C-----CCHHH-HHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred HH-hhc-----cchhH-HHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhc
Confidence 00 000 00000 00000000 00000000000000001111236789999999999999999999999888877
Q ss_pred --CCCcEEEEE---cCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 267 --GDNAQLIVI---KKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 267 --~~~~~~~~i---~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
.++.+++++ +++||.++.++|+.+++.|.+||.+...
T Consensus 361 ~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 361 QRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp HTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred cCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 345789999 7778889999999999999999986543
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-26 Score=191.06 Aligned_cols=253 Identities=12% Similarity=0.157 Sum_probs=152.2
Q ss_pred eeecCCCceEEEEEecCC-CCCCCcEEEEccCC---CChhhhHH-hhHhhccccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 28 VTDLQDGSVMHCWVPKTR-NDSKPDLVLIHGLG---ANALWQWT-NIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~-~~~~~~vvllHG~~---~~~~~~w~-~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
.+...||..++++...+. ++.+|+|||+||++ ++.. .|. .+.+.+.+.|+|+++|+||+|.+.. .......
T Consensus 7 ~~~~~dg~~l~~~~~~p~~~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~l~~~~~v~~~d~~~~~~~~~---~~~~~d~ 82 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKAN-DLSPQYIDILTEHYDLIQLSYRLLPEVSL---DCIIEDV 82 (275)
T ss_dssp EEECTTSCEEEEEEECCSSSSCSEEEEEECCSTTTSCCTT-CSCHHHHHHHTTTEEEEEECCCCTTTSCH---HHHHHHH
T ss_pred EEecCCcEEEEEEEEccCCCCCCCEEEEEECCcccCCchh-hhHHHHHHHHHhCceEEeeccccCCcccc---chhHHHH
Confidence 455568888888765433 33577899999987 4443 243 6777887779999999999987632 1112223
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
.+.+..+.+.++.++++|+||||||.+|+.+|.+ ++++++|++++............ .. ...........
T Consensus 83 ~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~- 152 (275)
T 3h04_A 83 YASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTT----NS---YYAKIAQSINE- 152 (275)
T ss_dssp HHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSC----CH---HHHHHHTTSCH-
T ss_pred HHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccc----cc---hhhcccccchH-
Confidence 4445555555677899999999999999999998 78999999877654432211100 00 00000000000
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCc----cc-cccccccCCCCeEEEEeCCCCCCchH
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPK----DR-KISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
.... .+...... ........................+..... .. ....+.+++ |+|+|+|++|.++|.+
T Consensus 153 --~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~~ 226 (275)
T 3h04_A 153 --TMIA-QLTSPTPV--VQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPVE 226 (275)
T ss_dssp --HHHH-TTSCSSCC--SSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCTH
T ss_pred --HHHh-cccCCCCc--CCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCChH
Confidence 0111 11111000 000010000000000000000011110000 00 112235677 9999999999999999
Q ss_pred HHHHHHhhcCCCcEEEEEcCCCCccccCCh---HHHHHHHHHHHhcC
Q 021229 258 LGRRLKSHLGDNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLDS 301 (315)
Q Consensus 258 ~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 301 (315)
.++.+.+.+ +++++++++++||.++.+.+ +++.+.+.+||++.
T Consensus 227 ~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~ 272 (275)
T 3h04_A 227 ESEHIMNHV-PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAI 272 (275)
T ss_dssp HHHHHHTTC-SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHH
Confidence 999999988 68899999999999999999 69999999999763
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=205.30 Aligned_cols=217 Identities=14% Similarity=0.213 Sum_probs=151.9
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME 111 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~ 111 (315)
+|..++++...+. ..|+|||+||++++.. .|..+.+.|.+ +|.|+++|+||||.|.......+....++++.++++
T Consensus 14 ~g~~l~~~~~~p~--~~p~vv~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~~~~~~~~~~~d~~~~i~ 90 (290)
T 3ksr_A 14 GQDELSGTLLTPT--GMPGVLFVHGWGGSQH-HSLVRAREAVGLGCICMTFDLRGHEGYASMRQSVTRAQNLDDIKAAYD 90 (290)
T ss_dssp TTEEEEEEEEEEE--SEEEEEEECCTTCCTT-TTHHHHHHHHTTTCEEECCCCTTSGGGGGGTTTCBHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCC--CCcEEEEeCCCCCCcC-cHHHHHHHHHHCCCEEEEeecCCCCCCCCCcccccHHHHHHHHHHHHH
Confidence 6778888765433 6789999999998886 59889888887 599999999999999765545555666788888888
Q ss_pred HcC------CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 112 AHS------VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 112 ~l~------~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
.+. .++++|+||||||.+++.++.++| +++++++++....... +..... .... . ..+.
T Consensus 91 ~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~------~~~~~~-~~~~---~---~~~~- 154 (290)
T 3ksr_A 91 QLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAH------WDQPKV-SLNA---D---PDLM- 154 (290)
T ss_dssp HHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSC------TTSBHH-HHHH---S---TTHH-
T ss_pred HHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhh------hhcccc-cccC---C---hhhh-
Confidence 772 358999999999999999999998 7888887654432210 000000 0000 0 0000
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhh
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH 265 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~ 265 (315)
.+..... . .. .......+.++++|+|+|+|++|.+++.+..+.+.+.
T Consensus 155 ----~~~~~~~----~-~~------------------------~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~ 201 (290)
T 3ksr_A 155 ----DYRRRAL----A-PG------------------------DNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADA 201 (290)
T ss_dssp ----HHTTSCC----C-GG------------------------GCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ----hhhhhhh----h-hc------------------------cccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHH
Confidence 0000000 0 00 0001122456789999999999999999999999988
Q ss_pred cCC--CcEEEEEcCCCCccccC-ChHHHHHHHHHHHhcC
Q 021229 266 LGD--NAQLIVIKKAGHAFNYE-KPKEFYKHLKSFLLDS 301 (315)
Q Consensus 266 ~~~--~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 301 (315)
++. +.++++++++||.++.+ +++++.+.|.+||.+.
T Consensus 202 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 240 (290)
T 3ksr_A 202 FTNARSLTSRVIAGADHALSVKEHQQEYTRALIDWLTEM 240 (290)
T ss_dssp TTTSSEEEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCceEEEcCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 732 24699999999987664 7899999999999754
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.3e-26 Score=200.93 Aligned_cols=235 Identities=16% Similarity=0.130 Sum_probs=133.0
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhh--hHHhhHhhccccceEEeec----CCCCCCCCCCCCCCCchhHHHHHHH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALW--QWTNIIPHMIHYFNVYVPD----LLFFGDSFTTRPERSESFQAECVMR 108 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~--~w~~~~~~l~~~~~vi~~D----~~G~G~S~~~~~~~~~~~~a~~~~~ 108 (315)
..++|....+.++.+++|||+||++.+..+ .|..+.+.|..+|+|+++| +||||.|+.. ..++++.+
T Consensus 24 ~~~~y~~~g~~~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~~g~~Vi~~Dl~~D~~G~G~S~~~-------~~~~d~~~ 96 (335)
T 2q0x_A 24 PYCKIPVFMMNMDARRCVLWVGGQTESLLSFDYFTNLAEELQGDWAFVQVEVPSGKIGSGPQDHA-------HDAEDVDD 96 (335)
T ss_dssp TTEEEEEEEECTTSSSEEEEECCTTCCTTCSTTHHHHHHHHTTTCEEEEECCGGGBTTSCSCCHH-------HHHHHHHH
T ss_pred CceeEEEeccCCCCCcEEEEECCCCccccchhHHHHHHHHHHCCcEEEEEeccCCCCCCCCcccc-------CcHHHHHH
Confidence 456666442112346789999999875421 3677888887789999995 5999998521 12333333
Q ss_pred ----HHHHcCCCceEEEEEchhHHHHHHHHH--hhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 109 ----VMEAHSVKKLSLVGLSYGGFVGYSMAA--QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 109 ----~l~~l~~~~v~lvGhSmGG~ia~~~a~--~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
+.+.+++++++|+||||||.||+.+|. .+|++|+++|++++............ ....... .
T Consensus 97 ~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~-----~~~~~~~--------~ 163 (335)
T 2q0x_A 97 LIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPE-----GCAARKE--------H 163 (335)
T ss_dssp HHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHH-----HHHHHHH--------H
T ss_pred HHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHH-----HHHHHHH--------H
Confidence 334478999999999999999999999 57999999999876432210000000 0000000 0
Q ss_pred HHHHHHhh----hccCCCCCCCCcchhHHHHHHHHHHHHHH-HHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 183 LKELMRYT----FFKRPPLSLVPSCLLSDYIDAMCTEYLEE-KRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 183 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
...+.... ..........+ .....+........... ...... ....+....+.+|++|||+|+|++|.++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~ 241 (335)
T 2q0x_A 164 VEKLMAEGRGEDSLAMLKHYDIP-ITPARLAGGGFPTLQEAVWNPCIR-KEFDVLRRSVGVIKVPLLLMLAHNVQYKPSD 241 (335)
T ss_dssp HHHHHHHTCTTCGGGGTTTCSSC-CCHHHHHTCSCSSHHHHTHHHHHT-TCHHHHHHTGGGCCSCEEEEEECCTTCCCCH
T ss_pred HHHHhhccCccccccchhhccCc-cCHHHHhhccCCCchhhhhhhhhh-hhhhHHHHHHhcCCCCeEEEEecCCCCCChh
Confidence 00000000 00000000000 00000000000000000 000000 0011123457789999999999999999975
Q ss_pred H-----HHHHHhhcCCCcE--------E-----EEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 258 L-----GRRLKSHLGDNAQ--------L-----IVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 258 ~-----~~~l~~~~~~~~~--------~-----~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
. .+.+++.+ ++++ + ++++++|| ++++.|.+||++
T Consensus 242 ~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~i~~agH--------e~~~~i~~FL~~ 293 (335)
T 2q0x_A 242 EEVGTVLEGVRDHT-GCNRVTVSYFNDTCDELRRVLKAAES--------EHVAAILQFLAD 293 (335)
T ss_dssp HHHHHHHHHHHHHS-SSSCEEEEECCCEECTTSCEEECCHH--------HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhc-CccccccccccchhhhhhcccCCCCC--------HHHHHHHHHHHh
Confidence 3 56777777 5776 6 89999999 458899999864
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6e-26 Score=181.41 Aligned_cols=170 Identities=19% Similarity=0.243 Sum_probs=134.3
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-c---eEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEE
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-F---NVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGL 123 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~---~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGh 123 (315)
++|+|||+||++++.. .|..+.+.|.+. | +|+++|+||+|.|.. .+....++++.++++.++.++++|+||
T Consensus 2 ~~~~vv~~HG~~~~~~-~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~lvG~ 76 (181)
T 1isp_A 2 EHNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY----NNGPVLSRFVQKVLDETGAKKVDIVAH 76 (181)
T ss_dssp CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH----HHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEECCcCCCHh-HHHHHHHHHHHcCCCCccEEEEecCCCCCchh----hhHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 3578999999998886 599999888764 4 799999999998742 233456788889999999999999999
Q ss_pred chhHHHHHHHHHhh--hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 124 SYGGFVGYSMAAQF--KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 124 SmGG~ia~~~a~~~--p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
||||.+++.++.++ |++|+++|++++....... .. .+
T Consensus 77 S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------------------------------~~-----~~ 115 (181)
T 1isp_A 77 SMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------------------------------KA-----LP 115 (181)
T ss_dssp THHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------------------------------BC-----CC
T ss_pred CccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------------------------------cc-----CC
Confidence 99999999999998 9999999998764311000 00 00
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
. .....++|+++|+|++|.++|++.+ .+ +++++++++++||+
T Consensus 116 ~--------------------------------~~~~~~~p~l~i~G~~D~~v~~~~~-----~~-~~~~~~~~~~~gH~ 157 (181)
T 1isp_A 116 G--------------------------------TDPNQKILYTSIYSSADMIVMNYLS-----RL-DGARNVQIHGVGHI 157 (181)
T ss_dssp C--------------------------------SCTTCCCEEEEEEETTCSSSCHHHH-----CC-BTSEEEEESSCCTG
T ss_pred C--------------------------------CCCccCCcEEEEecCCCcccccccc-----cC-CCCcceeeccCchH
Confidence 0 0012357999999999999998743 24 67899999999999
Q ss_pred cccCChHHHHHHHHHHHhcCC
Q 021229 282 FNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 282 ~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.+.++| ++.+.|.+||.+..
T Consensus 158 ~~~~~~-~~~~~i~~fl~~~~ 177 (181)
T 1isp_A 158 GLLYSS-QVNSLIKEGLNGGG 177 (181)
T ss_dssp GGGGCH-HHHHHHHHHHTTTC
T ss_pred hhccCH-HHHHHHHHHHhccC
Confidence 999997 79999999998643
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-25 Score=184.13 Aligned_cols=196 Identities=16% Similarity=0.208 Sum_probs=149.1
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC----------
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE---------- 96 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~---------- 96 (315)
++...+|..++++...+.++..|+||++||++++.. .|..+...|.+ +|.|+++|+||+|.|......
T Consensus 7 ~~~~~~g~~l~~~~~~p~~~~~p~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~ 85 (236)
T 1zi8_A 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQDIFGVNA-FMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAY 85 (236)
T ss_dssp CEECTTSCEECEEEECCSSCSEEEEEEECCTTBSCH-HHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHH
T ss_pred EEecCCCCeEEEEEECCCCCCCCEEEEEcCCCCCCH-HHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhh
Confidence 455568888887776544455678999999988876 58888888876 699999999999988542111
Q ss_pred -----CCchhHHHHHHHHHHHcC-----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhccc
Q 021229 97 -----RSESFQAECVMRVMEAHS-----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 97 -----~~~~~~a~~~~~~l~~l~-----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
.+.....+++.++++.+. .++++|+||||||.+++.++.++| +++++++.+...
T Consensus 86 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~-------------- 149 (236)
T 1zi8_A 86 KLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGL-------------- 149 (236)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSG--------------
T ss_pred hhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCccc--------------
Confidence 122334667777777775 478999999999999999999998 777776532110
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
+ .....+.++++|++++
T Consensus 150 ----------------------------------~-----------------------------~~~~~~~~~~~P~l~i 166 (236)
T 1zi8_A 150 ----------------------------------E-----------------------------KQLNKVPEVKHPALFH 166 (236)
T ss_dssp ----------------------------------G-----------------------------GCGGGGGGCCSCEEEE
T ss_pred ----------------------------------c-----------------------------cchhhhhhcCCCEEEE
Confidence 0 0011245678999999
Q ss_pred EeCCCCCCchHHHHHHHhhcC--CCcEEEEEcCCCCccccCCh--------HHHHHHHHHHHhcCCC
Q 021229 247 WGEHDQIFPLELGRRLKSHLG--DNAQLIVIKKAGHAFNYEKP--------KEFYKHLKSFLLDSQP 303 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~--~~~~~~~i~~~gH~~~~e~p--------~~~~~~i~~fl~~~~~ 303 (315)
+|++|.++|.+..+.+.+.+. ++.++++++++||.+..+.+ +++.+.+.+||++...
T Consensus 167 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 167 MGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp EETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred ecCCCCCCCHHHHHHHHHHHHhCCCceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999988773 37899999999998887765 5788999999987654
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=198.47 Aligned_cols=189 Identities=18% Similarity=0.270 Sum_probs=140.6
Q ss_pred eEEEEEecCCCCCCCcEEEEccCCCChhhhHH-------hhHhhccc-cceEEeecCCCCCCCCCCCCCCC---------
Q 021229 36 VMHCWVPKTRNDSKPDLVLIHGLGANALWQWT-------NIIPHMIH-YFNVYVPDLLFFGDSFTTRPERS--------- 98 (315)
Q Consensus 36 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~-------~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~--------- 98 (315)
.++++.+ .+..+++|||+||++.+.. .|. .+.+.|.+ +|+|+++|+||||.|........
T Consensus 51 ~~~~~~p--~~~~~~~vvl~HG~g~~~~-~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~ 127 (328)
T 1qlw_A 51 YVRYQIP--QRAKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPA 127 (328)
T ss_dssp EEEEEEE--TTCCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCG
T ss_pred EEEEEcc--CCCCCccEEEEeCCCCCCC-ccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCc
Confidence 3344444 2335678999999998875 587 37777755 59999999999999975321100
Q ss_pred -------------------------------------ch------------------hHHHHHHHHHHHcCCCceEEEEE
Q 021229 99 -------------------------------------ES------------------FQAECVMRVMEAHSVKKLSLVGL 123 (315)
Q Consensus 99 -------------------------------------~~------------------~~a~~~~~~l~~l~~~~v~lvGh 123 (315)
.. ..++++.++++.++ +++|+||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~lvGh 205 (328)
T 1qlw_A 128 SSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD--GTVLLSH 205 (328)
T ss_dssp GGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT--SEEEEEE
T ss_pred ccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHhC--CceEEEE
Confidence 11 14566777777775 8999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
||||.+++.+|.++|++|+++|++++.... . .
T Consensus 206 S~GG~~a~~~a~~~p~~v~~~v~~~p~~~~------------------------------------------~----~-- 237 (328)
T 1qlw_A 206 SQSGIYPFQTAAMNPKGITAIVSVEPGECP------------------------------------------K----P-- 237 (328)
T ss_dssp GGGTTHHHHHHHHCCTTEEEEEEESCSCCC------------------------------------------C----G--
T ss_pred CcccHHHHHHHHhChhheeEEEEeCCCCCC------------------------------------------C----H--
Confidence 999999999999999999999988643200 0 0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch-----HHHHHHHhhcC---CCcEEEEE
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL-----ELGRRLKSHLG---DNAQLIVI 275 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~-----~~~~~l~~~~~---~~~~~~~i 275 (315)
......+++|+|+++|++|.++|. +.++.+.+.++ .+++++++
T Consensus 238 -----------------------------~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 288 (328)
T 1qlw_A 238 -----------------------------EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSL 288 (328)
T ss_dssp -----------------------------GGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred -----------------------------HHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEc
Confidence 000123568999999999999996 88888887773 37899999
Q ss_pred cCCC-----CccccCC-hHHHHHHHHHHHhcCCCCCC
Q 021229 276 KKAG-----HAFNYEK-PKEFYKHLKSFLLDSQPSPL 306 (315)
Q Consensus 276 ~~~g-----H~~~~e~-p~~~~~~i~~fl~~~~~~~~ 306 (315)
+++| |+++.|. ++++.+.|.+||++....|.
T Consensus 289 ~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~~~ 325 (328)
T 1qlw_A 289 PALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAKPA 325 (328)
T ss_dssp GGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC---
T ss_pred CCCCcCCCcccchhccCHHHHHHHHHHHHHhcccCcc
Confidence 9666 9999998 99999999999998765543
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=178.89 Aligned_cols=169 Identities=14% Similarity=0.208 Sum_probs=132.6
Q ss_pred CCCcEEEEccCCCChhhhHH--hhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEE
Q 021229 48 SKPDLVLIHGLGANALWQWT--NIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGL 123 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~--~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGh 123 (315)
++|+|||+||++++.. .|. .+.+.|.+ +|+|+++|+||+|.|.............+++.+.++.+. .++++|+||
T Consensus 3 ~~~~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 81 (176)
T 2qjw_A 3 SRGHCILAHGFESGPD-ALKVTALAEVAERLGWTHERPDFTDLDARRDLGQLGDVRGRLQRLLEIARAATEKGPVVLAGS 81 (176)
T ss_dssp SSCEEEEECCTTCCTT-SHHHHHHHHHHHHTTCEEECCCCHHHHTCGGGCTTCCHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCcEEEEEeCCCCCcc-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 4678999999988763 344 77777765 599999999999998643333333444566666666654 679999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
||||.+++.++.++| ++++|++++...... .+
T Consensus 82 S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~--------------------------------------------~~-- 113 (176)
T 2qjw_A 82 SLGSYIAAQVSLQVP--TRALFLMVPPTKMGP--------------------------------------------LP-- 113 (176)
T ss_dssp THHHHHHHHHHTTSC--CSEEEEESCCSCBTT--------------------------------------------BC--
T ss_pred CHHHHHHHHHHHhcC--hhheEEECCcCCccc--------------------------------------------cC--
Confidence 999999999999998 999998865431100 00
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~ 283 (315)
.+..+++|+++++|++|.++|.+..+.+.+.+ +++++++ ++||.+.
T Consensus 114 -------------------------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~-~~~H~~~ 159 (176)
T 2qjw_A 114 -------------------------------ALDAAAVPISIVHAWHDELIPAADVIAWAQAR--SARLLLV-DDGHRLG 159 (176)
T ss_dssp -------------------------------CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH--TCEEEEE-SSCTTCT
T ss_pred -------------------------------cccccCCCEEEEEcCCCCccCHHHHHHHHHhC--CceEEEe-CCCcccc
Confidence 03457899999999999999999999998887 5789999 8999984
Q ss_pred cCChHHHHHHHHHHHhc
Q 021229 284 YEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~ 300 (315)
++++++.+.|.+|+++
T Consensus 160 -~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 160 -AHVQAASRAFAELLQS 175 (176)
T ss_dssp -TCHHHHHHHHHHHHHT
T ss_pred -ccHHHHHHHHHHHHHh
Confidence 8899999999999975
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=188.39 Aligned_cols=190 Identities=16% Similarity=0.133 Sum_probs=144.2
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChh-hhHHhhHhhcccc-ceEEeecCCCCCCCCCCCC----CCCchhHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRP----ERSESFQAECV 106 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~-~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~----~~~~~~~a~~~ 106 (315)
+|..++++...+. ++.|+||++||++.+.. +.|..+.+.|.+. |.|+++|+||+|.|..... ..+....++++
T Consensus 20 ~g~~l~~~~~~p~-~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~d~ 98 (223)
T 2o2g_A 20 GEVKLKGNLVIPN-GATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLRTRHLRFDIGLLASRL 98 (223)
T ss_dssp TTEEEEEEEECCT-TCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHCSSTTCHHHHHHHH
T ss_pred CCeEEEEEEecCC-CCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccchhhcccCcHHHHHHHH
Confidence 7778887765443 35789999999987764 2345677777764 9999999999998753221 13444556777
Q ss_pred HHHHHHcCC------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc
Q 021229 107 MRVMEAHSV------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 107 ~~~l~~l~~------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
.++++.+.. ++++++||||||.+++.++.++|++++++|++++....
T Consensus 99 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~--------------------------- 151 (223)
T 2o2g_A 99 VGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDL--------------------------- 151 (223)
T ss_dssp HHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGG---------------------------
T ss_pred HHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCc---------------------------
Confidence 777776643 38999999999999999999999999999987542100
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHH
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
. ...+.++++|+++++|++|.++|.+..+
T Consensus 152 ---------------~------------------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 180 (223)
T 2o2g_A 152 ---------------A------------------------------------PSALPHVKAPTLLIVGGYDLPVIAMNED 180 (223)
T ss_dssp ---------------C------------------------------------TTTGGGCCSCEEEEEETTCHHHHHHHHH
T ss_pred ---------------C------------------------------------HHHHhcCCCCEEEEEccccCCCCHHHHH
Confidence 0 0123457799999999999999877776
Q ss_pred HHHhhcCCCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhcCC
Q 021229 261 RLKSHLGDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 261 ~l~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 302 (315)
.+.+.. ++.++++++++||.+.. +.++++.+.|.+||++..
T Consensus 181 ~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 222 (223)
T 2o2g_A 181 ALEQLQ-TSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYL 222 (223)
T ss_dssp HHHHCC-SSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHC
T ss_pred HHHhhC-CCeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhc
Confidence 666654 68999999999999776 567999999999998643
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-25 Score=193.09 Aligned_cols=230 Identities=16% Similarity=0.151 Sum_probs=148.0
Q ss_pred cCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCC------------
Q 021229 31 LQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER------------ 97 (315)
Q Consensus 31 ~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~------------ 97 (315)
..+|..++++...+ +.++.|+||++||++++.. .|..+...+..+|.|+++|+||+|.|.......
T Consensus 89 ~~~g~~l~~~~~~P~~~~~~p~vv~~HG~g~~~~-~~~~~~~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g 167 (346)
T 3fcy_A 89 GVRGARIHAKYIKPKTEGKHPALIRFHGYSSNSG-DWNDKLNYVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRG 167 (346)
T ss_dssp CGGGCEEEEEEEEESCSSCEEEEEEECCTTCCSC-CSGGGHHHHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTT
T ss_pred cCCCCEEEEEEEecCCCCCcCEEEEECCCCCCCC-ChhhhhHHHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceecc
Confidence 34677788776433 2355789999999998875 588888778888999999999999886432111
Q ss_pred ----C----chhHHHHHHHH---HHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh
Q 021229 98 ----S----ESFQAECVMRV---MEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163 (315)
Q Consensus 98 ----~----~~~~a~~~~~~---l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 163 (315)
. .....+++.+. +..+ +.++++|+||||||.+|+.+|.++|+ |+++|++++....... ..
T Consensus 168 ~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~~-----~~ 241 (346)
T 3fcy_A 168 LDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYKR-----VW 241 (346)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHHH-----HH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHHH-----Hh
Confidence 0 11112333333 3333 34689999999999999999999998 9999988654321110 00
Q ss_pred cccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCe
Q 021229 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 243 (315)
... ........+...+... .. . .. ........ +...+....+.++++|+
T Consensus 242 ~~~--------~~~~~~~~~~~~~~~~--~~-~----~~-~~~~~~~~---------------~~~~d~~~~~~~i~~P~ 290 (346)
T 3fcy_A 242 DLD--------LAKNAYQEITDYFRLF--DP-R----HE-RENEVFTK---------------LGYIDVKNLAKRIKGDV 290 (346)
T ss_dssp HTT--------CCCGGGHHHHHHHHHH--CT-T----CT-THHHHHHH---------------HGGGCHHHHGGGCCSEE
T ss_pred hcc--------ccccchHHHHHHHHhc--CC-C----cc-hHHHHHHH---------------hCcccHHHHHHhcCCCE
Confidence 000 0000001111111110 00 0 00 00111110 00111223456789999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
|+++|++|.++|++.++.+.+.+..++++++++++||..+ +++.+.+.+||.+..
T Consensus 291 lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~----~~~~~~i~~fl~~l~ 345 (346)
T 3fcy_A 291 LMCVGLMDQVCPPSTVFAAYNNIQSKKDIKVYPDYGHEPM----RGFGDLAMQFMLELY 345 (346)
T ss_dssp EEEEETTCSSSCHHHHHHHHTTCCSSEEEEEETTCCSSCC----TTHHHHHHHHHHTTC
T ss_pred EEEeeCCCCcCCHHHHHHHHHhcCCCcEEEEeCCCCCcCH----HHHHHHHHHHHHHhh
Confidence 9999999999999999999988854789999999999998 677899999998653
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=191.38 Aligned_cols=216 Identities=15% Similarity=0.150 Sum_probs=141.6
Q ss_pred CCCCCcEEEEccCCCCh--hhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHH-HHHHHcCCCceEEEE
Q 021229 46 NDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM-RVMEAHSVKKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~--~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~-~~l~~l~~~~v~lvG 122 (315)
.+++++|||+||++++. . .|..+...|...|+|+++|+||||.|.. ...+...+++++. .+++.++.++++|+|
T Consensus 64 ~~~~~~lvllhG~~~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~--~~~~~~~~a~~~~~~l~~~~~~~~~~LvG 140 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPH-EFTRLAGALRGIAPVRAVPQPGYEEGEP--LPSSMAAVAAVQADAVIRTQGDKPFVVAG 140 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTT-TTHHHHHHTSSSCCBCCCCCTTSSTTCC--BCSSHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred CCCCCeEEEECCCcccCcHH-HHHHHHHhcCCCceEEEecCCCCCCCCC--CCCCHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 45678999999998865 5 5999999998889999999999999853 3455666677766 466778889999999
Q ss_pred EchhHHHHHHHHHhhh---hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCC
Q 021229 123 LSYGGFVGYSMAAQFK---EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSL 199 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
|||||.+|+.+|.++| ++|+++|++++........ .... ...+.. .+...... .
T Consensus 141 hS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~-~~~~--------------------~~~~~~-~~~~~~~~-~ 197 (300)
T 1kez_A 141 HSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA-MNAW--------------------LEELTA-TLFDRETV-R 197 (300)
T ss_dssp CTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH-HHHH--------------------HHHHHG-GGCCCCSS-C
T ss_pred ECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH-HHHH--------------------HHHHHH-HHHhCcCC-c
Confidence 9999999999999998 4899999987654322110 0000 000111 11111000 0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCC
Q 021229 200 VPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~g 279 (315)
.. ......+ . .....+.. ....++++|+|+|+|+ |.++++.. ..+.+.++.+.+++++++ |
T Consensus 198 ~~----~~~~~~~-----~---~~~~~~~~----~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~~~~~~~~i~g-g 258 (300)
T 1kez_A 198 MD----DTRLTAL-----G---AYDRLTGQ----WRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWPFEHDTVAVPG-D 258 (300)
T ss_dssp CC----HHHHHHH-----H---HHHHHTTT----CCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCSSCCEEEEESS-C
T ss_pred cc----hHHHHHH-----H---HHHHHHhc----CCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcCCCCeEEEecC-C
Confidence 01 1111100 0 11111111 1246789999999995 55555543 345555533579999998 9
Q ss_pred Ccccc-CChHHHHHHHHHHHhcCCCCCC
Q 021229 280 HAFNY-EKPKEFYKHLKSFLLDSQPSPL 306 (315)
Q Consensus 280 H~~~~-e~p~~~~~~i~~fl~~~~~~~~ 306 (315)
|++++ |+|+++++.|.+||.+....+.
T Consensus 259 H~~~~~e~~~~~~~~i~~fl~~~~~~~~ 286 (300)
T 1kez_A 259 HFTMVQEHADAIARHIDAWLGGGNSSSV 286 (300)
T ss_dssp TTTSSSSCSHHHHHHHHHHHTCC-----
T ss_pred ChhhccccHHHHHHHHHHHHHhccCCCc
Confidence 99997 9999999999999987655443
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-25 Score=176.82 Aligned_cols=168 Identities=15% Similarity=0.172 Sum_probs=132.2
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhH
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGG 127 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG 127 (315)
++++|||+||++++....|......+.. .++.+|++|++. .+....++++.++++.++ ++++|+||||||
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 85 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP--HWQRIRQREWYQ-------ADLDRWVLAIRRELSVCT-QPVILIGHSFGA 85 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT--TSEECCCSCCSS-------CCHHHHHHHHHHHHHTCS-SCEEEEEETHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC--CeEEEeccCCCC-------cCHHHHHHHHHHHHHhcC-CCeEEEEEChHH
Confidence 4689999999998773358777665433 456788888752 234556888899998887 899999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
.+++.++.++|++|+++|++++...... . .+..
T Consensus 86 ~~a~~~a~~~p~~v~~lvl~~~~~~~~~--------------------------------------~-----~~~~---- 118 (191)
T 3bdv_A 86 LAACHVVQQGQEGIAGVMLVAPAEPMRF--------------------------------------E-----IDDR---- 118 (191)
T ss_dssp HHHHHHHHTTCSSEEEEEEESCCCGGGG--------------------------------------T-----CTTT----
T ss_pred HHHHHHHHhcCCCccEEEEECCCccccc--------------------------------------c-----Cccc----
Confidence 9999999999999999999876432100 0 0000
Q ss_pred HHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc---
Q 021229 208 YIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY--- 284 (315)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~--- 284 (315)
..+.++++|+++++|++|.++|.+.++.+.+.+ ++++++++++||+++.
T Consensus 119 --------------------------~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~ 170 (191)
T 3bdv_A 119 --------------------------IQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW--DSELVDVGEAGHINAEAGF 170 (191)
T ss_dssp --------------------------SCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH--TCEEEECCSCTTSSGGGTC
T ss_pred --------------------------cccccCCCCEEEEecCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCcccccccc
Confidence 134578899999999999999999999998876 6899999999999988
Q ss_pred -CChHHHHHHHHHHHhcC
Q 021229 285 -EKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 285 -e~p~~~~~~i~~fl~~~ 301 (315)
+.|+.+ +.|.+||++.
T Consensus 171 ~~~~~~~-~~i~~fl~~~ 187 (191)
T 3bdv_A 171 GPWEYGL-KRLAEFSEIL 187 (191)
T ss_dssp SSCHHHH-HHHHHHHHTT
T ss_pred hhHHHHH-HHHHHHHHHh
Confidence 566665 9999999875
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=187.78 Aligned_cols=216 Identities=17% Similarity=0.113 Sum_probs=141.5
Q ss_pred CCCCCcEEEEccC--CCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc-CCCceEEEE
Q 021229 46 NDSKPDLVLIHGL--GANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH-SVKKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~--~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l-~~~~v~lvG 122 (315)
.+++++|||+||+ +++. +.|..+.+.|...|+|+++|+||||.|.. +..+...+++++.+.++.+ +.++++|+|
T Consensus 78 ~~~~~~lv~lhG~~~~~~~-~~~~~~~~~L~~~~~v~~~d~~G~G~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~lvG 154 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGP-QVYSRLAEELDAGRRVSALVPPGFHGGQA--LPATLTVLVRSLADVVQAEVADGEFALAG 154 (319)
T ss_dssp CCSSCEEEEECCSSTTCSG-GGGHHHHHHHCTTSEEEEEECTTSSTTCC--EESSHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred CCCCCeEEEECCCCcCCCH-HHHHHHHHHhCCCceEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4567899999996 4455 46999999998889999999999998643 2335556677777777766 568999999
Q ss_pred EchhHHHHHHHHHhh---hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhh-hccCCCCC
Q 021229 123 LSYGGFVGYSMAAQF---KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT-FFKRPPLS 198 (315)
Q Consensus 123 hSmGG~ia~~~a~~~---p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 198 (315)
|||||.+|+.+|.++ |++|+++|++++............... .. ........ ....
T Consensus 155 hS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~-----~~-----------~~~~~~~~~~~~~---- 214 (319)
T 3lcr_A 155 HSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFR-----SA-----------LNERFVEYLRLTG---- 214 (319)
T ss_dssp ETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHH-----HH-----------HHHHHHHHHHHHC----
T ss_pred ECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHH-----HH-----------HHHHHhhhhcccC----
Confidence 999999999999998 777999999987553322100000000 00 00000000 0000
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCC
Q 021229 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKA 278 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~ 278 (315)
.. . ....+..+ ...+..+... ....+++|+|+|+|++| .+++...+.+.+.++...+++++++
T Consensus 215 -~~-~-~~~~l~~~--------~~~~~~~~~~----~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g- 277 (319)
T 3lcr_A 215 -GG-N-LSQRITAQ--------VWCLELLRGW----RPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAAMGQVVEAPG- 277 (319)
T ss_dssp -CC-C-HHHHHHHH--------HHHHHHTTTC----CCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHTCSEEEEESS-
T ss_pred -CC-c-hhHHHHHH--------HHHHHHHhcC----CCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCCCceEEEeCC-
Confidence 00 0 01111111 1111111111 12578999999999984 5555666677776645578888875
Q ss_pred CCccccC--ChHHHHHHHHHHHhcC
Q 021229 279 GHAFNYE--KPKEFYKHLKSFLLDS 301 (315)
Q Consensus 279 gH~~~~e--~p~~~~~~i~~fl~~~ 301 (315)
||+.+++ +|+++++.|.+||.+.
T Consensus 278 ~H~~~~~~~~~~~va~~i~~fL~~~ 302 (319)
T 3lcr_A 278 DHFTIIEGEHVASTAHIVGDWLREA 302 (319)
T ss_dssp CTTGGGSTTTHHHHHHHHHHHHHHH
T ss_pred CcHHhhCcccHHHHHHHHHHHHHhc
Confidence 8888886 9999999999999864
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=180.78 Aligned_cols=187 Identities=14% Similarity=0.162 Sum_probs=122.8
Q ss_pred CCcEEEEccCCCChhhhH--HhhHhhc---cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEE
Q 021229 49 KPDLVLIHGLGANALWQW--TNIIPHM---IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGL 123 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w--~~~~~~l---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGh 123 (315)
.|+|||||||+++.. .| ..+...+ ..+|+|++||+||||++ ..+.+..+++.+..++++|+||
T Consensus 2 mptIl~lHGf~ss~~-s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~-----------~~~~l~~~~~~~~~~~i~l~G~ 69 (202)
T 4fle_A 2 MSTLLYIHGFNSSPS-SAKATTFKSWLQQHHPHIEMQIPQLPPYPAE-----------AAEMLESIVMDKAGQSIGIVGS 69 (202)
T ss_dssp -CEEEEECCTTCCTT-CHHHHHHHHHHHHHCTTSEEECCCCCSSHHH-----------HHHHHHHHHHHHTTSCEEEEEE
T ss_pred CcEEEEeCCCCCCCC-ccHHHHHHHHHHHcCCCcEEEEeCCCCCHHH-----------HHHHHHHHHHhcCCCcEEEEEE
Confidence 479999999987653 23 2223333 33599999999999854 3566778888889999999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
||||.+|+.+|.++|..+..++...+.. .......... . ..... .+-.
T Consensus 70 SmGG~~a~~~a~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------~--------------~~~~~-----~~~~ 117 (202)
T 4fle_A 70 SLGGYFATWLSQRFSIPAVVVNPAVRPF-----ELLSDYLGEN--------Q--------------NPYTG-----QKYV 117 (202)
T ss_dssp THHHHHHHHHHHHTTCCEEEESCCSSHH-----HHGGGGCEEE--------E--------------CTTTC-----CEEE
T ss_pred ChhhHHHHHHHHHhcccchheeeccchH-----HHHHHhhhhh--------c--------------ccccc-----cccc
Confidence 9999999999999998766555332110 0000000000 0 00000 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccc
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~ 283 (315)
....+... . . .......++++|+|+|+|++|.+||.+.++++. +++++.+++|+||.
T Consensus 118 ~~~~~~~~--------~----~-----~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~----~~~~l~i~~g~~H~-- 174 (202)
T 4fle_A 118 LESRHIYD--------L----K-----AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY----TPCRQTVESGGNHA-- 174 (202)
T ss_dssp ECHHHHHH--------H----H-----TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT----TTSEEEEESSCCTT--
T ss_pred chHHHHHH--------H----H-----hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh----hCCEEEEECCCCcC--
Confidence 11111110 0 0 012235678899999999999999998887664 57899999999996
Q ss_pred cCChHHHHHHHHHHHhcCC
Q 021229 284 YEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~~~ 302 (315)
++.++++.+.|.+||+-.+
T Consensus 175 ~~~~~~~~~~I~~FL~~a~ 193 (202)
T 4fle_A 175 FVGFDHYFSPIVTFLGLAT 193 (202)
T ss_dssp CTTGGGGHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHhhhh
Confidence 4677888999999997443
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.1e-24 Score=174.60 Aligned_cols=194 Identities=16% Similarity=0.132 Sum_probs=140.5
Q ss_pred eeeeecCCCceEEEEEecC-CC--CCCCcEEEEccCC---CC-hhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCC
Q 021229 26 SSVTDLQDGSVMHCWVPKT-RN--DSKPDLVLIHGLG---AN-ALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPER 97 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~-~~--~~~~~vvllHG~~---~~-~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~ 97 (315)
..++...+| .+.++...+ +. +++|+||++||++ ++ ....|..+.+.|.+ +|.|+++|+||+|.|..... .
T Consensus 12 ~~~~~~~~g-~~~~~~~~p~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-~ 89 (220)
T 2fuk_A 12 ALTLDGPVG-PLDVAVDLPEPDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD-H 89 (220)
T ss_dssp EEEEEETTE-EEEEEEECCCTTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCC-T
T ss_pred EEEEeCCCC-eEEEEEEeCCCCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCcc-c
Confidence 345566677 555544332 23 3477899999953 22 12247788888876 59999999999999965431 1
Q ss_pred CchhHHHHHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhh
Q 021229 98 SESFQAECVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASK 173 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (315)
.....+++.++++.+ +.++++|+||||||.+++.++.++ +++++|++++......
T Consensus 90 -~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------------------ 148 (220)
T 2fuk_A 90 -GDGEQDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------------------ 148 (220)
T ss_dssp -TTHHHHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC------------------
T ss_pred -CchhHHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh------------------
Confidence 122344444444433 456999999999999999999988 8999998865431100
Q ss_pred hccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCC
Q 021229 174 ILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
+ ..+. ...|+++++|++|.+
T Consensus 149 ------------------~-----------------------------------------~~~~-~~~p~l~i~g~~D~~ 168 (220)
T 2fuk_A 149 ------------------F-----------------------------------------SDVQ-PPAQWLVIQGDADEI 168 (220)
T ss_dssp ------------------C-----------------------------------------TTCC-CCSSEEEEEETTCSS
T ss_pred ------------------h-----------------------------------------hhcc-cCCcEEEEECCCCcc
Confidence 0 0011 157999999999999
Q ss_pred CchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 254 FPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
+|.+.++.+.+.+.++.++++++++||.+.. +++++.+.+.+|+.+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 169 VDPQAVYDWLETLEQQPTLVRMPDTSHFFHR-KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp SCHHHHHHHHTTCSSCCEEEEETTCCTTCTT-CHHHHHHHHHHHHGGGCS
T ss_pred cCHHHHHHHHHHhCcCCcEEEeCCCCceehh-hHHHHHHHHHHHHHHHhh
Confidence 9999999999888567999999999999888 588999999999987653
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-24 Score=192.48 Aligned_cols=232 Identities=18% Similarity=0.164 Sum_probs=153.7
Q ss_pred eeeeeeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCC-CCCCCCch
Q 021229 24 FRSSVTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFT-TRPERSES 100 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~-~~~~~~~~ 100 (315)
.+...+.. +|..++++...+ +.++.|+||++||++++... |......+ ..+|.|+++|+||+|.|.. ........
T Consensus 127 ~~~v~~~~-dg~~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~-~~~~~~~l~~~G~~v~~~d~rG~G~s~~~~~~~~~~~ 204 (386)
T 2jbw_A 127 AERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEE-SFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYE 204 (386)
T ss_dssp EEEEEEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTTT-THHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHH
T ss_pred eEEEEEEe-CCEEEEEEEEcCCCCCCCCEEEEeCCCCccHHH-HHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCccHH
Confidence 33334444 788888776533 23456789999999887653 44445555 4569999999999999832 22233334
Q ss_pred hHHHHHHHHHHH---cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 101 FQAECVMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 101 ~~a~~~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
....++.+++.+ ++.++++|+||||||.+++.++.+ |++++++|++ +....... .. .
T Consensus 205 ~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~--~~------~---------- 264 (386)
T 2jbw_A 205 KYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDY--WD------L---------- 264 (386)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTT--GG------G----------
T ss_pred HHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHH--HH------h----------
Confidence 456777888887 556899999999999999999998 8899999998 54432211 00 0
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
.+..+.......+ .... ..++.. ..+. .......+.++++|+|+++|++|. +|++
T Consensus 265 -~~~~~~~~~~~~~-g~~~--------~~~~~~-----------~~~~---~~~~~~~~~~i~~P~Lii~G~~D~-v~~~ 319 (386)
T 2jbw_A 265 -ETPLTKESWKYVS-KVDT--------LEEARL-----------HVHA---ALETRDVLSQIACPTYILHGVHDE-VPLS 319 (386)
T ss_dssp -SCHHHHHHHHHHT-TCSS--------HHHHHH-----------HHHH---HTCCTTTGGGCCSCEEEEEETTSS-SCTH
T ss_pred -ccHHHHHHHHHHh-CCCC--------HHHHHH-----------HHHH---hCChhhhhcccCCCEEEEECCCCC-CCHH
Confidence 0001111111111 1000 011110 0000 111223567889999999999999 9999
Q ss_pred HHHHHHhhc-CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 258 LGRRLKSHL-GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 258 ~~~~l~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
.++.+.+.+ ..+.++++++++||.. .++++++.+.|.+||.+...
T Consensus 320 ~~~~l~~~l~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 320 FVDTVLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 365 (386)
T ss_dssp HHHHHHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCcEEEEeCCCCcCC-ccchHHHHHHHHHHHHHhcC
Confidence 999999887 4468999999999965 67889999999999986543
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=178.40 Aligned_cols=179 Identities=14% Similarity=0.196 Sum_probs=131.7
Q ss_pred CCcEEEEccCCCChhhhHHhhHh-hc-cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchh
Q 021229 49 KPDLVLIHGLGANALWQWTNIIP-HM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYG 126 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~-~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmG 126 (315)
.|+|||+||++++....|...+. .| ..+|+|+++|+| .|.. + +....++++.++++.+ .++++|+|||||
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~---~~~~--~--~~~~~~~~~~~~~~~~-~~~~~l~G~S~G 75 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP---NPLQ--P--RLEDWLDTLSLYQHTL-HENTYLVAHSLG 75 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS---CTTS--C--CHHHHHHHHHTTGGGC-CTTEEEEEETTH
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC---CCCC--C--CHHHHHHHHHHHHHhc-cCCEEEEEeCcc
Confidence 45699999999887414777774 57 567999999999 2221 1 3445677788888877 789999999999
Q ss_pred HHHHHHHHHhhhh--hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcch
Q 021229 127 GFVGYSMAAQFKE--KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCL 204 (315)
Q Consensus 127 G~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (315)
|.+++.++.++|+ +++++|++++....... . . .. ..+...+. .
T Consensus 76 g~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~-----~---~---~~-----------------~~~~~~~~----~--- 120 (192)
T 1uxo_A 76 CPAILRFLEHLQLRAALGGIILVSGFAKSLPT-----L---Q---ML-----------------DEFTQGSF----D--- 120 (192)
T ss_dssp HHHHHHHHHTCCCSSCEEEEEEETCCSSCCTT-----C---G---GG-----------------GGGTCSCC----C---
T ss_pred HHHHHHHHHHhcccCCccEEEEeccCCCcccc-----c---h---hh-----------------hhhhhcCC----C---
Confidence 9999999999999 99999998764322110 0 0 00 01111000 0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcccc
Q 021229 205 LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~ 284 (315)
...+.++++|+++|+|++|.++|.+.++.+++.+ ++++++++++||+++.
T Consensus 121 ----------------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~ 170 (192)
T 1uxo_A 121 ----------------------------HQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLED 170 (192)
T ss_dssp ----------------------------HHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGG
T ss_pred ----------------------------HHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc--CceEEEeCCCcCcccc
Confidence 0122346679999999999999999999999887 6899999999999999
Q ss_pred CChHH---HHHHHHHHHhc
Q 021229 285 EKPKE---FYKHLKSFLLD 300 (315)
Q Consensus 285 e~p~~---~~~~i~~fl~~ 300 (315)
++|++ +.+.|.+|+++
T Consensus 171 ~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 171 EGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp GTCSCCHHHHHHHHHHHHC
T ss_pred cccccHHHHHHHHHHHHHH
Confidence 98854 47777778764
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=184.41 Aligned_cols=168 Identities=15% Similarity=0.136 Sum_probs=131.1
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH-------HcCCCce
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME-------AHSVKKL 118 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~-------~l~~~~v 118 (315)
+.+|+|||+||++++.. .|..+...|.+ +|.|+++|++|+|.+... .. .......+.+. .++.+++
T Consensus 52 ~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~----~~-~d~~~~~~~l~~~~~~~~~~~~~~i 125 (262)
T 1jfr_A 52 GTFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQPDS----RG-RQLLSALDYLTQRSSVRTRVDATRL 125 (262)
T ss_dssp CCEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCHHH----HH-HHHHHHHHHHHHTSTTGGGEEEEEE
T ss_pred CCCCEEEEeCCcCCCch-hHHHHHHHHHhCCCEEEEeCCCCCCCCCch----hH-HHHHHHHHHHHhccccccccCcccE
Confidence 45678999999998886 58888888865 599999999999976321 01 11222233333 3456799
Q ss_pred EEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCC
Q 021229 119 SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLS 198 (315)
Q Consensus 119 ~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (315)
+|+||||||.+++.++.++|+ ++++|++++...
T Consensus 126 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---------------------------------------------- 158 (262)
T 1jfr_A 126 GVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---------------------------------------------- 158 (262)
T ss_dssp EEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----------------------------------------------
T ss_pred EEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----------------------------------------------
Confidence 999999999999999999997 888887643210
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHHhhcCC--CcEEEEE
Q 021229 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSHLGD--NAQLIVI 275 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~~~~~~--~~~~~~i 275 (315)
...+.++++|+|+++|++|.+++.+. ++.+.+.+.. +.+++++
T Consensus 159 ----------------------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~~~ 204 (262)
T 1jfr_A 159 ----------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLEL 204 (262)
T ss_dssp ----------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEE
T ss_pred ----------------------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhcCCCceEEEe
Confidence 01234578999999999999999998 9999888732 3599999
Q ss_pred cCCCCccccCChHHHHHHHHHHHhcC
Q 021229 276 KKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 276 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++||..+.++++++.+.|.+||++.
T Consensus 205 ~~~~H~~~~~~~~~~~~~i~~fl~~~ 230 (262)
T 1jfr_A 205 RGASHFTPNTSDTTIAKYSISWLKRF 230 (262)
T ss_dssp TTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCcccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999754
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=178.63 Aligned_cols=179 Identities=17% Similarity=0.259 Sum_probs=131.1
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEee-------------------cCCCCCCCCCCCCCCCchhHHH
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVP-------------------DLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~-------------------D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
.++.+|+|||+||++.+.. .|..+.+.|.+ +|+|+++ |++|+ .+.......+....++
T Consensus 19 ~~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~~~~~~~~~~~~ 96 (232)
T 1fj2_A 19 ARKATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQEDESGIKQAAE 96 (232)
T ss_dssp SSCCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCCBCHHHHHHHHH
T ss_pred CCCCCceEEEEecCCCccc-hHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-CcccccccHHHHHHHH
Confidence 3456789999999999886 59999999886 7999998 66666 2222222223444567
Q ss_pred HHHHHHHHc---CC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 105 CVMRVMEAH---SV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 105 ~~~~~l~~l---~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
++.++++.+ ++ ++++|+||||||.+++.++.++|++++++|++++.......
T Consensus 97 ~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~----------------------- 153 (232)
T 1fj2_A 97 NIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS----------------------- 153 (232)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG-----------------------
T ss_pred HHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcc-----------------------
Confidence 788888876 65 79999999999999999999999999999988654321000
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
.+. ....+..+++|+++++|++|.++|.+.+
T Consensus 154 --------------------~~~-----------------------------~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 184 (232)
T 1fj2_A 154 --------------------FPQ-----------------------------GPIGGANRDISILQCHGDCDPLVPLMFG 184 (232)
T ss_dssp --------------------SCS-----------------------------SCCCSTTTTCCEEEEEETTCSSSCHHHH
T ss_pred --------------------ccc-----------------------------cccccccCCCCEEEEecCCCccCCHHHH
Confidence 000 0112456789999999999999999988
Q ss_pred HHHHhhcC-----CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 260 RRLKSHLG-----DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 260 ~~l~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.+.+.+. ++.++++++++||.+..|.+ +.+.+||++.
T Consensus 185 ~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~----~~i~~~l~~~ 227 (232)
T 1fj2_A 185 SLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEM----MDVKQFIDKL 227 (232)
T ss_dssp HHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEeCCCCcccCHHHH----HHHHHHHHHh
Confidence 87776652 35899999999999954444 5566666543
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=182.38 Aligned_cols=206 Identities=16% Similarity=0.156 Sum_probs=143.9
Q ss_pred eeeecCCC--ceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCch
Q 021229 27 SVTDLQDG--SVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 27 ~~~~~~~g--~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
..+...+| ..+.+|.+. ++++|+|||+||.| ++.. .|..+.+.|.+ +|+|+++|+||+|.. +..
T Consensus 41 ~~i~~~~~~~~~~~~~~p~--~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~~~~~-------~~~ 110 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPE--GTPVGLFVFVHGGYWMAFDKS-SWSHLAVGALSKGWAVAMPSYELCPEV-------RIS 110 (262)
T ss_dssp EEEESSSSTTCEEEEECCS--SSCSEEEEEECCSTTTSCCGG-GCGGGGHHHHHTTEEEEEECCCCTTTS-------CHH
T ss_pred cccccCCCCCceEEEEccC--CCCCCEEEEEcCcccccCChH-HHHHHHHHHHhCCCEEEEeCCCCCCCC-------ChH
Confidence 34554444 345555432 25678899999943 5554 58888888865 499999999998743 233
Q ss_pred hHHHHHHHHHHHcCC---CceEEEEEchhHHHHHHHHHhh------hhhhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 101 FQAECVMRVMEAHSV---KKLSLVGLSYGGFVGYSMAAQF------KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~---~~v~lvGhSmGG~ia~~~a~~~------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
...+++.++++.+.. ++++|+||||||.+|+.++.++ |++++++|++++....... ....
T Consensus 111 ~~~~d~~~~~~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~--~~~~--------- 179 (262)
T 2pbl_A 111 EITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPL--LRTS--------- 179 (262)
T ss_dssp HHHHHHHHHHHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGG--GGST---------
T ss_pred HHHHHHHHHHHHHHHhccCCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHH--Hhhh---------
Confidence 456666666665543 6999999999999999999988 8999999998765432110 0000
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHD 251 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 251 (315)
... .+ . .. ..... . ......+.++++|+|+++|++|
T Consensus 180 -----------~~~----~~-~------~~----~~~~~-----------~-------~~~~~~~~~~~~P~lii~G~~D 215 (262)
T 2pbl_A 180 -----------MNE----KF-K------MD----ADAAI-----------A-------ESPVEMQNRYDAKVTVWVGGAE 215 (262)
T ss_dssp -----------THH----HH-C------CC----HHHHH-----------H-------TCGGGCCCCCSCEEEEEEETTS
T ss_pred -----------hhh----hh-C------CC----HHHHH-----------h-------cCcccccCCCCCCEEEEEeCCC
Confidence 000 00 0 00 00000 0 0012234678899999999999
Q ss_pred CCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 252 QIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
.+++.+.++.+.+.+ + +++++++++||+.+.|+|++.+..+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~ 261 (262)
T 2pbl_A 216 RPAFLDQAIWLVEAW-D-ADHVIAFEKHHFNVIEPLADPESDLVAVIT 261 (262)
T ss_dssp CHHHHHHHHHHHHHH-T-CEEEEETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHh-C-CeEEEeCCCCcchHHhhcCCCCcHHHHHHh
Confidence 999999999999998 4 999999999999999999988888888764
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=181.28 Aligned_cols=175 Identities=19% Similarity=0.234 Sum_probs=129.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEee--cCCCCCCCCCCC----CCCCch---hHHHHHHHHHHHc---
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVP--DLLFFGDSFTTR----PERSES---FQAECVMRVMEAH--- 113 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~--D~~G~G~S~~~~----~~~~~~---~~a~~~~~~l~~l--- 113 (315)
+++.|+||++||++++.. .|..+.+.|+++|.|+++ |++|+|.|.... ...... ..++++.++++.+
T Consensus 59 ~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (251)
T 2r8b_A 59 VAGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANREH 137 (251)
T ss_dssp CTTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEeCCCCCHh-HHHHHHHhcCCCceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 346789999999998886 699999999888999999 899999774211 111111 1244555555444
Q ss_pred -CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhc
Q 021229 114 -SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFF 192 (315)
Q Consensus 114 -~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (315)
+.++++|+||||||.+++.++.++|++++++|++++......
T Consensus 138 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~------------------------------------- 180 (251)
T 2r8b_A 138 YQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------------- 180 (251)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------------------
T ss_pred cCCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-------------------------------------
Confidence 889999999999999999999999999999999865431100
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC-CcE
Q 021229 193 KRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD-NAQ 271 (315)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~-~~~ 271 (315)
. .....+++|+|+++|++|.++|.+.++.+.+.+.. +.+
T Consensus 181 -~---------------------------------------~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~ 220 (251)
T 2r8b_A 181 -K---------------------------------------ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGT 220 (251)
T ss_dssp -C---------------------------------------CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSE
T ss_pred -c---------------------------------------ccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCe
Confidence 0 01123678999999999999999999999888731 456
Q ss_pred EE-EEcCCCCccccCChHHHHHHHHHHH
Q 021229 272 LI-VIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 272 ~~-~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
+. +++++||.++.+.++++.+.|.++|
T Consensus 221 ~~~~~~~~gH~~~~~~~~~~~~~l~~~l 248 (251)
T 2r8b_A 221 VETVWHPGGHEIRSGEIDAVRGFLAAYG 248 (251)
T ss_dssp EEEEEESSCSSCCHHHHHHHHHHHGGGC
T ss_pred EEEEecCCCCccCHHHHHHHHHHHHHhc
Confidence 55 7889999998777665554444443
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-24 Score=187.78 Aligned_cols=266 Identities=15% Similarity=0.144 Sum_probs=146.6
Q ss_pred eecCCCceEEEEEecC-C--CCCCCcEEEEccCCCChhhhHHh-hHhhccc-cceEEeecCCCCCCCCCCCCCCC-chhH
Q 021229 29 TDLQDGSVMHCWVPKT-R--NDSKPDLVLIHGLGANALWQWTN-IIPHMIH-YFNVYVPDLLFFGDSFTTRPERS-ESFQ 102 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~-~--~~~~~~vvllHG~~~~~~~~w~~-~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~-~~~~ 102 (315)
+...||..++++...+ + .+..|+||++||++++.. .|.. +...|.+ +|.|+++|+||+|.|........ ....
T Consensus 73 ~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~ 151 (367)
T 2hdw_A 73 FANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGAVKE-QSSGLYAQTMAERGFVTLAFDPSYTGESGGQPRNVASPDIN 151 (367)
T ss_dssp EECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTCCTT-SHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSSSCCCHHHH
T ss_pred EecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCCcch-hhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCccccchhhH
Confidence 4445677777754322 2 234578999999988765 4664 6777765 49999999999999864332222 2334
Q ss_pred HHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 103 AECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 103 a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
.+++.++++.+ +.++++|+||||||.+++.++.++| +++++|++++.. .. ...................+.
T Consensus 152 ~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~-~~-~~~~~~~~~~~~~~~~~~~~~ 228 (367)
T 2hdw_A 152 TEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYD-MT-RVMSKGYNDSVTLEQRTRTLE 228 (367)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC-HH-HHHHHTTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccc-cc-HHHhhhhccccchHHHHHHHH
Confidence 45555555444 2468999999999999999999998 699999886431 10 000000000000000000000
Q ss_pred CCCchHHHHHHHhhhcc---CCCCCCCCcchhHHHHHHHHHHH---HH---HH----HHhhhccCccccccccccCC-CC
Q 021229 177 PQSPGKLKELMRYTFFK---RPPLSLVPSCLLSDYIDAMCTEY---LE---EK----RELVRAIPKDRKISNIDKIT-QP 242 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~---~~----~~~~~~~~~~~~~~~l~~i~-~P 242 (315)
.........+....+.- .+...........+..+...... .. .. ......+...+....+.+++ +|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P 308 (367)
T 2hdw_A 229 QLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPRP 308 (367)
T ss_dssp HHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTTSC
T ss_pred HHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcCCc
Confidence 00000000000000000 00000000011111111000000 00 00 00000001112234567888 99
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHH-HHHHHHHHHhc
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE-FYKHLKSFLLD 300 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~-~~~~i~~fl~~ 300 (315)
+|+++|++|. +.+.++.+.+...+++++++++++||..+.+.|+. +.+.|.+||++
T Consensus 309 vLii~G~~D~--~~~~~~~~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~ 365 (367)
T 2hdw_A 309 ILLIHGERAH--SRYFSETAYAAAAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDE 365 (367)
T ss_dssp EEEEEETTCT--THHHHHHHHHHSCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHH
T ss_pred eEEEecCCCC--CHHHHHHHHHhCCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHh
Confidence 9999999998 77778888775546899999999999988888875 58999999975
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=174.02 Aligned_cols=207 Identities=16% Similarity=0.284 Sum_probs=141.3
Q ss_pred ceeeeeeecC-CCceEEEEEecCCC--CCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCC-
Q 021229 23 GFRSSVTDLQ-DGSVMHCWVPKTRN--DSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPER- 97 (315)
Q Consensus 23 ~~~~~~~~~~-~g~~~~~~~~~~~~--~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~- 97 (315)
|+..+.+++. +|..+.++...+.+ +..|.||++||++++.. .|..+...|.+ +|.|+++|++|+|.+.......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~vv~~HG~~g~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~ 81 (241)
T 3f67_A 3 AIIAGETSIPSQGENMPAYHARPKNADGPLPIVIVVQEIFGVHE-HIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIP 81 (241)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTCCSCEEEEEEECCTTCSCH-HHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHH
T ss_pred cceeeeEEEecCCcceEEEEecCCCCCCCCCEEEEEcCcCccCH-HHHHHHHHHHHCCcEEEEecccccCCCCCchhhHH
Confidence 4545444443 67677766543222 33578999999988775 58888888864 5999999999998775332211
Q ss_pred ----------CchhHHHHHHHHHHHcC-----CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhh
Q 021229 98 ----------SESFQAECVMRVMEAHS-----VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162 (315)
Q Consensus 98 ----------~~~~~a~~~~~~l~~l~-----~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~ 162 (315)
......+++.++++.+. .++++|+||||||.+++.++.++|+ +.+++++.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~~------ 154 (241)
T 3f67_A 82 TLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKS------ 154 (241)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCCC------
T ss_pred HHHHHhhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCCc------
Confidence 11223555666665542 4689999999999999999999987 6776665433211000
Q ss_pred hcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC
Q 021229 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP 242 (315)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 242 (315)
. ..+.. ....+.++++|
T Consensus 155 ---------------------------------~--~~~~~----------------------------~~~~~~~~~~P 171 (241)
T 3f67_A 155 ---------------------------------L--NSPKH----------------------------PVDIAVDLNAP 171 (241)
T ss_dssp ---------------------------------S--SSCCC----------------------------HHHHGGGCCSC
T ss_pred ---------------------------------c--CCccC----------------------------HHHhhhhcCCC
Confidence 0 00000 01123467899
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCccccC--------ChHHHHHHHHHHHhc
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNYE--------KPKEFYKHLKSFLLD 300 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~e--------~p~~~~~~i~~fl~~ 300 (315)
+|+++|++|.++|.+..+.+.+.+ +++.++++++++||.+..+ ..+++.+.+.+||++
T Consensus 172 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 172 VLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999888887776 2578999999999988643 236778889999874
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=181.45 Aligned_cols=168 Identities=17% Similarity=0.129 Sum_probs=131.6
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH---------cCCC
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA---------HSVK 116 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~---------l~~~ 116 (315)
+..|+|||+||++++.. .|..+.+.|.+. |.|+++|++|+|.|..... . ......+.+.. ++.+
T Consensus 94 ~~~p~vv~~HG~~~~~~-~~~~~~~~la~~G~~vv~~d~~g~g~s~~~~~----~-d~~~~~~~l~~~~~~~~~~~~~~~ 167 (306)
T 3vis_A 94 NTYGAIAISPGYTGTQS-SIAWLGERIASHGFVVIAIDTNTTLDQPDSRA----R-QLNAALDYMLTDASSAVRNRIDAS 167 (306)
T ss_dssp SCEEEEEEECCTTCCHH-HHHHHHHHHHTTTEEEEEECCSSTTCCHHHHH----H-HHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred CCCCEEEEeCCCcCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCcchHH----H-HHHHHHHHHHhhcchhhhccCCcc
Confidence 35678999999998886 699999988775 9999999999998842111 1 12222233333 3457
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (315)
+++|+||||||.+++.++.++|+ ++++|++++...
T Consensus 168 ~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~-------------------------------------------- 202 (306)
T 3vis_A 168 RLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL-------------------------------------------- 202 (306)
T ss_dssp EEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS--------------------------------------------
T ss_pred cEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC--------------------------------------------
Confidence 89999999999999999999997 888887643210
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHHHhhcCC--CcEEE
Q 021229 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRLKSHLGD--NAQLI 273 (315)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l~~~~~~--~~~~~ 273 (315)
...+.++++|+|+++|++|.++|.+ ..+.+.+.+.. ..+++
T Consensus 203 ------------------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~~~~~~ 246 (306)
T 3vis_A 203 ------------------------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPTDKAYL 246 (306)
T ss_dssp ------------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTSCEEEE
T ss_pred ------------------------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCCCceEE
Confidence 0123457799999999999999998 58889888854 56899
Q ss_pred EEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 274 VIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 274 ~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++++||..+.++++++.+.+.+||++.
T Consensus 247 ~~~g~gH~~~~~~~~~~~~~i~~fl~~~ 274 (306)
T 3vis_A 247 ELDGASHFAPNITNKTIGMYSVAWLKRF 274 (306)
T ss_dssp EETTCCTTGGGSCCHHHHHHHHHHHHHH
T ss_pred EECCCCccchhhchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999754
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-24 Score=174.45 Aligned_cols=177 Identities=18% Similarity=0.233 Sum_probs=131.8
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhhcc---ccceEEeecCC-------------------CCCCCCCCCCCCCchhH
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPHMI---HYFNVYVPDLL-------------------FFGDSFTTRPERSESFQ 102 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~l~---~~~~vi~~D~~-------------------G~G~S~~~~~~~~~~~~ 102 (315)
++++.|+|||+||++++.. .|..+.+.|. .+|+|+++|+| |+|.+.. .........
T Consensus 10 ~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~-~~~~~~~~~ 87 (218)
T 1auo_A 10 AKPADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS-ISLEELEVS 87 (218)
T ss_dssp SSCCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE-ECHHHHHHH
T ss_pred CCCCCcEEEEEecCCCChh-hHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc-cchHHHHHH
Confidence 3456789999999998875 5889999887 57999998766 4443311 111223334
Q ss_pred HHHHHHHHHHc---CC--CceEEEEEchhHHHHHHHHH-hhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 103 AECVMRVMEAH---SV--KKLSLVGLSYGGFVGYSMAA-QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 103 a~~~~~~l~~l---~~--~~v~lvGhSmGG~ia~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
++++.++++.+ ++ ++++|+||||||.+++.++. ++|++++++|++++.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~---------------------- 145 (218)
T 1auo_A 88 AKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF---------------------- 145 (218)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC----------------------
T ss_pred HHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc----------------------
Confidence 66777777776 54 48999999999999999999 9999999999987543210
Q ss_pred CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch
Q 021229 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
. .+..+ ....+++|+++++|++|.++|.
T Consensus 146 -----------------~-----~~~~~------------------------------~~~~~~~P~l~i~G~~D~~~~~ 173 (218)
T 1auo_A 146 -----------------G-----DELEL------------------------------SASQQRIPALCLHGQYDDVVQN 173 (218)
T ss_dssp -----------------C-----TTCCC------------------------------CHHHHTCCEEEEEETTCSSSCH
T ss_pred -----------------h-----hhhhh------------------------------hhcccCCCEEEEEeCCCceecH
Confidence 0 00000 0023578999999999999999
Q ss_pred HHHHHHHhhcCC---CcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 257 ELGRRLKSHLGD---NAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 257 ~~~~~l~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
+.++.+.+.+.. +.++++++ +||.++.+.++++.+.|.++|
T Consensus 174 ~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l 217 (218)
T 1auo_A 174 AMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARL 217 (218)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHh
Confidence 989888887743 58999999 999999888887777777665
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-23 Score=178.47 Aligned_cols=227 Identities=16% Similarity=0.138 Sum_probs=138.5
Q ss_pred cCCCceEEEEEecC-CCCCCCcEEEEccCCCC-hhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC------------
Q 021229 31 LQDGSVMHCWVPKT-RNDSKPDLVLIHGLGAN-ALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE------------ 96 (315)
Q Consensus 31 ~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~-~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~------------ 96 (315)
..+|..++++...+ +.++.|+||++||++++ .. .|.........+|.|+++|+||+|.|......
T Consensus 63 ~~~g~~i~~~~~~P~~~~~~p~vv~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~ 141 (318)
T 1l7a_A 63 SFGNARITGWYAVPDKEGPHPAIVKYHGYNASYDG-EIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKG 141 (318)
T ss_dssp EGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSGG-GHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTT
T ss_pred ccCCCEEEEEEEeeCCCCCccEEEEEcCCCCCCCC-CcccccchhhCCcEEEEecCCCCCCCCCcccccCCccccceecc
Confidence 34676677665432 23456789999999988 65 57776655566799999999999998643110
Q ss_pred ------CCchhHHHHHHHHHHHc----C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc
Q 021229 97 ------RSESFQAECVMRVMEAH----S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164 (315)
Q Consensus 97 ------~~~~~~a~~~~~~l~~l----~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (315)
+......+++.++++.+ + .++++|+||||||.+++.+|.++|+ +.+++++++...... . ...
T Consensus 142 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~-~----~~~ 215 (318)
T 1l7a_A 142 ILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFE-R----AID 215 (318)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHH-H----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHH-H----HHh
Confidence 00122344444444443 1 2689999999999999999999885 777777544321100 0 000
Q ss_pred ccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeE
Q 021229 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTL 244 (315)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 244 (315)
.. .......+..++.... .+ ...... ...+...+....+.++++|+|
T Consensus 216 ~~---------~~~~~~~~~~~~~~~~--------~~-~~~~~~---------------~~~~~~~~~~~~~~~~~~P~l 262 (318)
T 1l7a_A 216 VA---------LEQPYLEINSFFRRNG--------SP-ETEVQA---------------MKTLSYFDIMNLADRVKVPVL 262 (318)
T ss_dssp HC---------CSTTTTHHHHHHHHSC--------CH-HHHHHH---------------HHHHHTTCHHHHGGGCCSCEE
T ss_pred cC---------CcCccHHHHHHHhccC--------Cc-ccHHHH---------------HHhhccccHHHHHhhCCCCEE
Confidence 00 0000001111111000 00 000000 000001112223567889999
Q ss_pred EEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 245 ILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 245 vi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+++|++|.++|.+.++.+.+.+...+++++++++||.. +.++.+.+.+||.+.
T Consensus 263 i~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~----~~~~~~~~~~fl~~~ 315 (318)
T 1l7a_A 263 MSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY----IPAFQTEKLAFFKQI 315 (318)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSC----CHHHHHHHHHHHHHH
T ss_pred EEeccCCCCCCcccHHHHHhhcCCCeeEEEccCCCCCC----cchhHHHHHHHHHHH
Confidence 99999999999999999998885458999999999993 346677888887653
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-22 Score=181.80 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=146.7
Q ss_pred CCceEEEEEe-cCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 021229 33 DGSVMHCWVP-KTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM 110 (315)
Q Consensus 33 ~g~~~~~~~~-~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l 110 (315)
+|..+..+.. +.+++..|+||++||++++....|..+...+. .+|.|+++|+||+|.|...............+.+++
T Consensus 176 ~g~~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~v~~~l 255 (415)
T 3mve_A 176 EKGKITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNEL 255 (415)
T ss_dssp SSSEEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSCCCSCTTHHHHHHHHHG
T ss_pred CCEEEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5666666543 22344567899999998885444666666664 569999999999999975433333334456666777
Q ss_pred HHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHH
Q 021229 111 EAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELM 187 (315)
Q Consensus 111 ~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (315)
..+. .++++|+||||||.+++.++..+|++|+++|++++....... .. .. ....+......+
T Consensus 256 ~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~---~~--------~~----~~~~~~~~~~~~ 320 (415)
T 3mve_A 256 FSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFA---SP--------QK----LQQMPKMYLDVL 320 (415)
T ss_dssp GGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHH---CH--------HH----HTTSCHHHHHHH
T ss_pred HhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccc---cH--------HH----HHHhHHHHHHHH
Confidence 6654 578999999999999999999999999999998765321100 00 00 000111122222
Q ss_pred HhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC
Q 021229 188 RYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG 267 (315)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~ 267 (315)
...+... . .....+... ...+. ........ ..++++|+|+|+|++|.++|.+.++.+.+..
T Consensus 321 ~~~~g~~-~------~~~~~~~~~---------~~~~~-~~~~~~~~-~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~- 381 (415)
T 3mve_A 321 ASRLGKS-V------VDIYSLSGQ---------MAAWS-LKVQGFLS-SRKTKVPILAMSLEGDPVSPYSDNQMVAFFS- 381 (415)
T ss_dssp HHHTTCS-S------BCHHHHHHH---------GGGGC-TTTTTTTT-SSCBSSCEEEEEETTCSSSCHHHHHHHHHTB-
T ss_pred HHHhCCC-c------cCHHHHHHH---------HhhcC-cccccccc-cCCCCCCEEEEEeCCCCCCCHHHHHHHHHhC-
Confidence 2211111 0 001111100 00000 00000011 3678999999999999999999999998877
Q ss_pred CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 268 DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 268 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++++++++++..+ .+.++++.+.+.+||++.
T Consensus 382 ~~~~l~~i~g~~~---h~~~~~~~~~i~~fL~~~ 412 (415)
T 3mve_A 382 TYGKAKKISSKTI---TQGYEQSLDLAIKWLEDE 412 (415)
T ss_dssp TTCEEEEECCCSH---HHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCc---ccchHHHHHHHHHHHHHH
Confidence 7899999998322 236788899999999764
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=174.83 Aligned_cols=188 Identities=18% Similarity=0.189 Sum_probs=133.2
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEee--cCCCCCCCCCCC----CCCCchh
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVP--DLLFFGDSFTTR----PERSESF 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~--D~~G~G~S~~~~----~~~~~~~ 101 (315)
++++ +|..++++.... .+..|+||++||++++.. .|..+...|.++|.|+++ |++|+|.|.... .......
T Consensus 19 ~~~~-~~~~~~~~~~~~-~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~g~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~ 95 (226)
T 2h1i_A 19 YFQS-NAMMKHVFQKGK-DTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEED 95 (226)
T ss_dssp HHHH-HSSSCEEEECCS-CTTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred eecC-CCceeEEecCCC-CCCCcEEEEEecCCCChh-HHHHHHHHhccCceEEEecCcccCCcchhhccccCccCcChhh
Confidence 3444 567778876532 246789999999998876 588999999889999999 999999874221 1112222
Q ss_pred H---HHHHHHHH----HHc--CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhh
Q 021229 102 Q---AECVMRVM----EAH--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEAS 172 (315)
Q Consensus 102 ~---a~~~~~~l----~~l--~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (315)
. .+++.+++ +.. +.++++|+||||||.+++.++.++|++++++|++++......
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------- 158 (226)
T 2h1i_A 96 LIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG----------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-----------------
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-----------------
Confidence 2 22333343 444 448999999999999999999999999999998865431100
Q ss_pred hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCC
Q 021229 173 KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQ 252 (315)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 252 (315)
. .....+++|+++++|++|.
T Consensus 159 -----------------------~-------------------------------------~~~~~~~~p~l~~~G~~D~ 178 (226)
T 2h1i_A 159 -----------------------M-------------------------------------QLANLAGKSVFIAAGTNDP 178 (226)
T ss_dssp -----------------------C-------------------------------------CCCCCTTCEEEEEEESSCS
T ss_pred -----------------------c-------------------------------------ccccccCCcEEEEeCCCCC
Confidence 0 0012347899999999999
Q ss_pred CCchHHHHHHHhhcCC---CcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 253 IFPLELGRRLKSHLGD---NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 253 ~~~~~~~~~l~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++|.+..+.+.+.++. ..++ +++++||.++.+.+ +.+.+||.+
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~----~~~~~~l~~ 224 (226)
T 2h1i_A 179 ICSSAESEELKVLLENANANVTM-HWENRGHQLTMGEV----EKAKEWYDK 224 (226)
T ss_dssp SSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHHH----HHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHHH----HHHHHHHHH
Confidence 9999988888887732 3455 99999999965444 555555543
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-23 Score=175.25 Aligned_cols=205 Identities=13% Similarity=0.145 Sum_probs=134.9
Q ss_pred CCCCCcEEEEccCC-----CChhhhHHhhHhhc-----cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC
Q 021229 46 NDSKPDLVLIHGLG-----ANALWQWTNIIPHM-----IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV 115 (315)
Q Consensus 46 ~~~~~~vvllHG~~-----~~~~~~w~~~~~~l-----~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~ 115 (315)
++..|+|||+||.| .+.. .|..++..| ..+|+|+++|+++.+.+.. ........+.+..+++.++.
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~-~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~~---~~~~~d~~~~~~~l~~~~~~ 113 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPN-DFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGL 113 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGG-GGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEECCCcccCCcCChH-HHHHHHHHHhhhhccCCcEEEEeecccCCCCCC---CcHHHHHHHHHHHHHHhCCc
Confidence 44577899999954 2343 588888888 5679999999998765421 12233345556667777788
Q ss_pred CceEEEEEchhHHHHHHHHHhh-----------------hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQF-----------------KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~-----------------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
++++|+||||||.+|+.++.++ |++++++|++++....... ... ...
T Consensus 114 ~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~--~~~---~~~----------- 177 (273)
T 1vkh_A 114 TNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKEL--LIE---YPE----------- 177 (273)
T ss_dssp CCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHH--HHH---CGG-----------
T ss_pred CcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHh--hhh---ccc-----------
Confidence 9999999999999999999986 8889999988654322110 000 000
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
...+....+..... .+ ... .... .. .. ...+..+++|+|+|+|++|.++|.+.
T Consensus 178 ----~~~~~~~~~~~~~~-~~-~~~-~~~~-~~----~~---------------~~~~~~~~~P~lii~G~~D~~vp~~~ 230 (273)
T 1vkh_A 178 ----YDCFTRLAFPDGIQ-MY-EEE-PSRV-MP----YV---------------KKALSRFSIDMHLVHSYSDELLTLRQ 230 (273)
T ss_dssp ----GHHHHHHHCTTCGG-GC-CCC-HHHH-HH----HH---------------HHHHHHHTCEEEEEEETTCSSCCTHH
T ss_pred ----HHHHHHHHhccccc-ch-hhc-cccc-Ch----hh---------------hhcccccCCCEEEEecCCcCCCChHH
Confidence 00111111100000 00 000 0000 00 00 00112367899999999999999998
Q ss_pred HHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 259 GRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 259 ~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
++.+.+.+. .++++++++++||..++++ +++.+.|.+||
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 231 TNCLISCLQDYQLSFKLYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCceEEEEeCCCcccccccC-hHHHHHHHHHc
Confidence 888887663 2579999999999999998 89999999987
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=180.22 Aligned_cols=198 Identities=14% Similarity=0.152 Sum_probs=127.9
Q ss_pred CCCCCcEEEEccCC--CChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhH---HHHHHHHHHHcCC--Cc
Q 021229 46 NDSKPDLVLIHGLG--ANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQ---AECVMRVMEAHSV--KK 117 (315)
Q Consensus 46 ~~~~~~vvllHG~~--~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~---a~~~~~~l~~l~~--~~ 117 (315)
+++.|+||++||.| ......|..+...|.+ +|.|+++|+||+|.+....+ ...... .+.+.+..+.+++ ++
T Consensus 47 ~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~~~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~ 125 (283)
T 3bjr_A 47 QTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQPLGL-APVLDLGRAVNLLRQHAAEWHIDPQQ 125 (283)
T ss_dssp -CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCSSCBT-HHHHHHHHHHHHHHHSHHHHTEEEEE
T ss_pred CCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccccCch-hHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 34568899999944 2222358888888875 49999999999998731111 111111 1222222233344 48
Q ss_pred eEEEEEchhHHHHHHHHHhhhhh-------------hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHH
Q 021229 118 LSLVGLSYGGFVGYSMAAQFKEK-------------IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 118 v~lvGhSmGG~ia~~~a~~~p~~-------------v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
++|+||||||.+|+.++.++|++ +++++++++....... +. . ..
T Consensus 126 i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~------~~--~-----------~~---- 182 (283)
T 3bjr_A 126 ITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLG------FP--K-----------DD---- 182 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSB------C---------------------
T ss_pred EEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccc------cc--c-----------cc----
Confidence 99999999999999999999977 7788776544321100 00 0 00
Q ss_pred HHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
. .+ .. . .. ..........+.++++|+|+++|++|.++|.+.++.+.+
T Consensus 183 ~----~~-~~-~---~~------------------------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~ 229 (283)
T 3bjr_A 183 A----TL-AT-W---TP------------------------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYAT 229 (283)
T ss_dssp ---------C-C---CC------------------------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHH
T ss_pred c----hH-HH-H---HH------------------------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHH
Confidence 0 00 00 0 00 000011223456788999999999999999988888887
Q ss_pred hcC---CCcEEEEEcCCCCccccCCh-------------HHHHHHHHHHHhc
Q 021229 265 HLG---DNAQLIVIKKAGHAFNYEKP-------------KEFYKHLKSFLLD 300 (315)
Q Consensus 265 ~~~---~~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~ 300 (315)
.+. .+.++++++++||.+..+.| +++.+.+.+||++
T Consensus 230 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~ 281 (283)
T 3bjr_A 230 ALATAKIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLAD 281 (283)
T ss_dssp HHHHTTCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHH
T ss_pred HHHHCCCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhh
Confidence 763 24699999999998777665 7889999999975
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=173.45 Aligned_cols=172 Identities=18% Similarity=0.286 Sum_probs=127.8
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcc---ccceEEeecCC-------------------CCCCCCCCCCCCCchhHH
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI---HYFNVYVPDLL-------------------FFGDSFTTRPERSESFQA 103 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~---~~~~vi~~D~~-------------------G~G~S~~~~~~~~~~~~a 103 (315)
+++.|+|||+||++.+.. .|..+++.|. .+|+|+++|+| |+|.+. ..........+
T Consensus 21 ~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~-~~~~~~~~~~~ 98 (226)
T 3cn9_A 21 PNADACIIWLHGLGADRT-DFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPAR-AIDEDQLNASA 98 (226)
T ss_dssp TTCCEEEEEECCTTCCGG-GGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTT-CBCHHHHHHHH
T ss_pred CCCCCEEEEEecCCCChH-HHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccc-cccchhHHHHH
Confidence 456789999999998886 5999999988 67999998776 555332 11222334456
Q ss_pred HHHHHHHHHc---CC--CceEEEEEchhHHHHHHHHH-hhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 104 ECVMRVMEAH---SV--KKLSLVGLSYGGFVGYSMAA-QFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 104 ~~~~~~l~~l---~~--~~v~lvGhSmGG~ia~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
+++.++++.+ ++ ++++|+||||||.+++.++. ++|++++++|++++......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~---------------------- 156 (226)
T 3cn9_A 99 DQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFD---------------------- 156 (226)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGG----------------------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCch----------------------
Confidence 7777888776 65 58999999999999999999 99999999998865431100
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
.+ . . ....+++|+++++|++|.++|.+
T Consensus 157 ------------~~--~-----~----------------------------------~~~~~~~P~lii~G~~D~~~~~~ 183 (226)
T 3cn9_A 157 ------------DL--A-----L----------------------------------DERHKRIPVLHLHGSQDDVVDPA 183 (226)
T ss_dssp ------------GC--C-----C----------------------------------CTGGGGCCEEEEEETTCSSSCHH
T ss_pred ------------hh--h-----h----------------------------------cccccCCCEEEEecCCCCccCHH
Confidence 00 0 0 01346789999999999999999
Q ss_pred HHHHHHhhcCC---CcEEEEEcCCCCccccCChHHHHHHHH
Q 021229 258 LGRRLKSHLGD---NAQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 258 ~~~~l~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
.++.+.+.+.. ++++++++ +||.++.+.++++.+.|.
T Consensus 184 ~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~ 223 (226)
T 3cn9_A 184 LGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLR 223 (226)
T ss_dssp HHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHH
Confidence 98888887732 58999999 999997776655444333
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.4e-23 Score=174.15 Aligned_cols=221 Identities=11% Similarity=0.139 Sum_probs=144.4
Q ss_pred eeeeeecCCCceEEEEEecCCC----CCCCcEEEEccCC---CChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCC
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRN----DSKPDLVLIHGLG---ANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPE 96 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~----~~~~~vvllHG~~---~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~ 96 (315)
...+....+|..+++|...+.. +..|+||++||.| ++.. .|..+...|.+ +|.|+++|+||+|.|......
T Consensus 15 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~ 93 (276)
T 3hxk_A 15 NKSTFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQR-ESDPLALAFLAQGYQVLLLNYTVMNKGTNYNFL 93 (276)
T ss_dssp CEEECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGG-GSHHHHHHHHHTTCEEEEEECCCTTSCCCSCTH
T ss_pred ccccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCch-hhHHHHHHHHHCCCEEEEecCccCCCcCCCCcC
Confidence 3345556678888988764432 4568999999943 3333 47777777764 599999999999987532111
Q ss_pred CCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHh-hhhhhceeEEeeCCCccCchhhhhhhhcccchh
Q 021229 97 RSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQ-FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLE 169 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
.........+.+.+... +.++++|+||||||.+++.++.+ .+.+++++|++++....... +....
T Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~------~~~~~-- 165 (276)
T 3hxk_A 94 SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFG------WPSDL-- 165 (276)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSS------CSSSS--
T ss_pred chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhh------CCcch--
Confidence 11111122223333332 34689999999999999999998 78899999998765432211 00000
Q ss_pred hhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC
Q 021229 170 EASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249 (315)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 249 (315)
.+ . . ..+... ........+.++++|+|+++|+
T Consensus 166 --------------------~~-~--~--~~~~~~-----------------------~~~~~~~~~~~~~~P~lii~G~ 197 (276)
T 3hxk_A 166 --------------------SH-F--N--FEIENI-----------------------SEYNISEKVTSSTPPTFIWHTA 197 (276)
T ss_dssp --------------------SS-S--C--CCCSCC-----------------------GGGBTTTTCCTTSCCEEEEEET
T ss_pred --------------------hh-h--h--cCchhh-----------------------hhCChhhccccCCCCEEEEecC
Confidence 00 0 0 000000 0001223456788999999999
Q ss_pred CCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCCh-------------HHHHHHHHHHHhcCC
Q 021229 250 HDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKP-------------KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p-------------~~~~~~i~~fl~~~~ 302 (315)
+|.++|.+.++.+.+.+. .++++++++++||.+....+ +++.+.+.+||++..
T Consensus 198 ~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 198 DDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 999999998888877662 34699999999998877555 678889999998643
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.1e-23 Score=174.00 Aligned_cols=222 Identities=10% Similarity=0.091 Sum_probs=131.6
Q ss_pred ceeeeeeecC-CCce--EEEEEec-----CCCCCCCcEEEEcc---CCCChhhhHHhhHhhccc-cceEEeecCCCCCCC
Q 021229 23 GFRSSVTDLQ-DGSV--MHCWVPK-----TRNDSKPDLVLIHG---LGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDS 90 (315)
Q Consensus 23 ~~~~~~~~~~-~g~~--~~~~~~~-----~~~~~~~~vvllHG---~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S 90 (315)
||+...+.+. +|.. +.++.+. ...+..|+||++|| .+++.. .|..+...|.+ +|.|+++|+||||.+
T Consensus 1 gm~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~g~~ 79 (277)
T 3bxp_A 1 GMQVEQRTLNTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGR-EEAPIATRMMAAGMHTVVLNYQLIVGD 79 (277)
T ss_dssp CEEEEEEEECSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCT-THHHHHHHHHHTTCEEEEEECCCSTTT
T ss_pred CcceEEEEeccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCc-cchHHHHHHHHCCCEEEEEecccCCCC
Confidence 3444445542 4443 3445443 12345678999999 445543 58888888864 599999999999944
Q ss_pred CCCCCCCCchhHHHH---HHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--------------hhhhceeEEeeCCC
Q 021229 91 FTTRPERSESFQAEC---VMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--------------KEKIEKVVICCSGV 151 (315)
Q Consensus 91 ~~~~~~~~~~~~a~~---~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--------------p~~v~~lil~~~~~ 151 (315)
.. ..........+. +.+..+.++ .++++|+||||||.+|+.++.++ |.+++++|++++..
T Consensus 80 ~~-~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~ 158 (277)
T 3bxp_A 80 QS-VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVI 158 (277)
T ss_dssp CC-CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCC
T ss_pred Cc-cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcc
Confidence 32 111111111111 222222233 35899999999999999999986 66788888876543
Q ss_pred ccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccc
Q 021229 152 CLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDR 231 (315)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (315)
..... +. . ..... ..+.. ......
T Consensus 159 ~~~~~------~~-------------~-~~~~~----~~~~~--------------------------------~~~~~~ 182 (277)
T 3bxp_A 159 DLTAG------FP-------------T-TSAAR----NQITT--------------------------------DARLWA 182 (277)
T ss_dssp BTTSS------SS-------------S-SHHHH----HHHCS--------------------------------CGGGSB
T ss_pred cCCCC------CC-------------C-ccccc----hhccc--------------------------------hhhhcC
Confidence 21110 00 0 00000 00000 000011
Q ss_pred cccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCC---------------hHHHHHH
Q 021229 232 KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEK---------------PKEFYKH 293 (315)
Q Consensus 232 ~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~---------------p~~~~~~ 293 (315)
....+.++.+|+|+++|++|.++|.+.++.+.+.+. .++++++++++||.+.... ++++.+.
T Consensus 183 ~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (277)
T 3bxp_A 183 AQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQL 262 (277)
T ss_dssp GGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC----------------CHHHHHHHHHHHHH
T ss_pred HhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHH
Confidence 122345677899999999999999988888877652 3569999999999665544 4788999
Q ss_pred HHHHHhcCC
Q 021229 294 LKSFLLDSQ 302 (315)
Q Consensus 294 i~~fl~~~~ 302 (315)
+.+||++..
T Consensus 263 ~~~fl~~~~ 271 (277)
T 3bxp_A 263 ALRWLQEQG 271 (277)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcc
Confidence 999998654
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=174.09 Aligned_cols=239 Identities=14% Similarity=0.150 Sum_probs=138.9
Q ss_pred eeecCCCceEEEEEecC-CCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchh
Q 021229 28 VTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESF 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~ 101 (315)
++...+| .+.++...+ +....|+||++||+| ++.. .|..+...|.. +|+|+++|+||+|++..+........
T Consensus 52 ~i~~~~g-~i~~~~~~p~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~g~~~~~~~~~d~~~ 129 (311)
T 2c7b_A 52 HIPVSGG-SIRARVYFPKKAAGLPAVLYYHGGGFVFGSIE-THDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYA 129 (311)
T ss_dssp EEEETTE-EEEEEEEESSSCSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTCEEEEECCCCTTTSCTTHHHHHHHH
T ss_pred EecCCCC-cEEEEEEecCCCCCCcEEEEECCCcccCCChh-hhHHHHHHHHHhcCCEEEEecCCCCCCCCCCccHHHHHH
Confidence 3444555 555543322 223357899999987 6664 58888888876 69999999999998853221111111
Q ss_pred HHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 102 QAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 102 ~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
..+.+.+.++++++ ++++|+||||||.+|+.++.++|++ ++++|++++.......... .. ........
T Consensus 130 ~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~-~~---~~~~~~~~-- 203 (311)
T 2c7b_A 130 ALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTA-SL---VEFGVAET-- 203 (311)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCH-HH---HHHHHCTT--
T ss_pred HHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCcccccc-CC---ccHHHhcc--
Confidence 23344455555666 6899999999999999999999984 8999988765432110000 00 00000000
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
.. ........+...+..... .. ...........+..+. |+|+++|++|.+++
T Consensus 204 ~~-~~~~~~~~~~~~~~~~~~-------------------------~~-~~~~~~p~~~~l~~~~-P~lii~G~~D~~~~ 255 (311)
T 2c7b_A 204 TS-LPIELMVWFGRQYLKRPE-------------------------EA-YDFKASPLLADLGGLP-PALVVTAEYDPLRD 255 (311)
T ss_dssp CS-SCHHHHHHHHHHHCSSTT-------------------------GG-GSTTTCGGGSCCTTCC-CEEEEEETTCTTHH
T ss_pred CC-CCHHHHHHHHHHhCCCCc-------------------------cc-cCcccCcccccccCCC-cceEEEcCCCCchH
Confidence 00 000000000001100000 00 0000000111233444 99999999999987
Q ss_pred hHH--HHHHHhhcCCCcEEEEEcCCCCccc-----cCChHHHHHHHHHHHhcCCC
Q 021229 256 LEL--GRRLKSHLGDNAQLIVIKKAGHAFN-----YEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 256 ~~~--~~~l~~~~~~~~~~~~i~~~gH~~~-----~e~p~~~~~~i~~fl~~~~~ 303 (315)
... .+.+.+.. .+++++++++++|.+. .++++++.+.|.+||++...
T Consensus 256 ~~~~~~~~l~~~g-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 256 EGELYAYKMKASG-SRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp HHHHHHHHHHHTT-CCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCC-CCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 542 24444433 5789999999999876 45568999999999987654
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=180.09 Aligned_cols=224 Identities=13% Similarity=0.110 Sum_probs=136.1
Q ss_pred CCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC--CCC-----------
Q 021229 32 QDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT--RPE----------- 96 (315)
Q Consensus 32 ~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~--~~~----------- 96 (315)
.+|..++++...+. +++.|+||++||++.+..+ |.........+|.|+++|+||+|.|... ...
T Consensus 76 ~dg~~i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~-~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~ 154 (337)
T 1vlq_A 76 YRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGF-PHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYP 154 (337)
T ss_dssp GGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCCC-GGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCS
T ss_pred CCCCEEEEEEEecCCCCCCccEEEEEcCCCCCCCC-chhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCC
Confidence 46777777654332 3445789999999877643 4444444456799999999999977431 011
Q ss_pred ------------CCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh
Q 021229 97 ------------RSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL 158 (315)
Q Consensus 97 ------------~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~ 158 (315)
+......+++.++++.+ +.++++|+||||||.+++.+|.++| +++++++.++.......
T Consensus 155 ~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~~~~~~~-- 231 (337)
T 1vlq_A 155 GFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRR-- 231 (337)
T ss_dssp SSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHH--
T ss_pred cccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCcccCHHH--
Confidence 00113355556666555 2358999999999999999999998 58998877654321100
Q ss_pred hhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccccc
Q 021229 159 RDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDK 238 (315)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (315)
..... .......+...+. ..+ . ....+...+ ...+....+.+
T Consensus 232 ---~~~~~---------~~~~~~~~~~~~~----~~~------~-~~~~~~~~~---------------~~~~~~~~~~~ 273 (337)
T 1vlq_A 232 ---AVQLV---------DTHPYAEITNFLK----THR------D-KEEIVFRTL---------------SYFDGVNFAAR 273 (337)
T ss_dssp ---HHHHC---------CCTTHHHHHHHHH----HCT------T-CHHHHHHHH---------------HTTCHHHHHTT
T ss_pred ---HHhcC---------CCcchHHHHHHHH----hCc------h-hHHHHHHhh---------------hhccHHHHHHH
Confidence 00000 0000000111110 000 0 001111100 01111223457
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++|+|+++|++|.++|++.++.+.+.+..++++++++++||.... ++..+.+.+||.+
T Consensus 274 i~~P~lii~G~~D~~~p~~~~~~~~~~l~~~~~~~~~~~~gH~~~~---~~~~~~~~~fl~~ 332 (337)
T 1vlq_A 274 AKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGG---SFQAVEQVKFLKK 332 (337)
T ss_dssp CCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTH---HHHHHHHHHHHHH
T ss_pred cCCCEEEEeeCCCCCCCchhHHHHHHhcCCCcEEEEcCCCCCCCcc---hhhHHHHHHHHHH
Confidence 8899999999999999999999999888546899999999999632 3445666666654
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-23 Score=166.83 Aligned_cols=183 Identities=19% Similarity=0.209 Sum_probs=126.8
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeec-------------CCCCCCCCCCCCCC-Cc
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD-------------LLFFGDSFTTRPER-SE 99 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D-------------~~G~G~S~~~~~~~-~~ 99 (315)
|..+++...++.+++.| |||+||++++.. .|..+.+.|..+++|+++| ++|||.+....... ..
T Consensus 2 G~~~~~~~~~~~~~~~p-vv~lHG~g~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~ 79 (209)
T 3og9_A 2 GHMTDYVFKAGRKDLAP-LLLLHSTGGDEH-QLVEIAEMIAPSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESL 79 (209)
T ss_dssp --CCCEEEECCCTTSCC-EEEECCTTCCTT-TTHHHHHHHSTTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHH
T ss_pred CCcceEEEeCCCCCCCC-EEEEeCCCCCHH-HHHHHHHhcCCCceEEEecCCcCCCCcccceecccccccccCCCCHHHH
Confidence 33444444433344566 999999999886 5999999998889999999 77777654322211 11
Q ss_pred hhHHHHHHHHH----HHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhh
Q 021229 100 SFQAECVMRVM----EAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASK 173 (315)
Q Consensus 100 ~~~a~~~~~~l----~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (315)
....+++.+++ +..++ ++++|+||||||.+++.++.++|++++++|++++......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------ 141 (209)
T 3og9_A 80 DEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------ 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc------------------
Confidence 22233444444 44565 7899999999999999999999999999998764321100
Q ss_pred hccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCC
Q 021229 174 ILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
. ......++|+++++|++|++
T Consensus 142 ----------------------~-------------------------------------~~~~~~~~p~li~~G~~D~~ 162 (209)
T 3og9_A 142 ----------------------E-------------------------------------QTVQLDDKHVFLSYAPNDMI 162 (209)
T ss_dssp ----------------------C-------------------------------------CCCCCTTCEEEEEECTTCSS
T ss_pred ----------------------c-------------------------------------ccccccCCCEEEEcCCCCCc
Confidence 0 00123568999999999999
Q ss_pred CchHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 254 FPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 254 ~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+|.+.++.+.+.+. ...++++++ +||.+.. +..+.+.+||++
T Consensus 163 v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~----~~~~~~~~~l~~ 207 (209)
T 3og9_A 163 VPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQ----EEVLAAKKWLTE 207 (209)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCH----HHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCH----HHHHHHHHHHHh
Confidence 99998888877663 236777776 7998853 335667777764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=170.39 Aligned_cols=228 Identities=12% Similarity=0.126 Sum_probs=135.6
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~ 107 (315)
+|..++++.+. +++.|+||++||.| ++.. .|..++..|.. +|+|+++|+||.+... .........+.+.
T Consensus 82 ~~~~~~~~~p~--~~~~p~vv~lHGgg~~~~~~~-~~~~~~~~la~~~g~~vi~~D~r~~~~~~---~~~~~~d~~~~~~ 155 (326)
T 3d7r_A 82 DDMQVFRFNFR--HQIDKKILYIHGGFNALQPSP-FHWRLLDKITLSTLYEVVLPIYPKTPEFH---IDDTFQAIQRVYD 155 (326)
T ss_dssp TTEEEEEEEST--TCCSSEEEEECCSTTTSCCCH-HHHHHHHHHHHHHCSEEEEECCCCTTTSC---HHHHHHHHHHHHH
T ss_pred CCEEEEEEeeC--CCCCeEEEEECCCcccCCCCH-HHHHHHHHHHHHhCCEEEEEeCCCCCCCC---chHHHHHHHHHHH
Confidence 45555555532 24567899999954 3443 47778887763 5999999999865431 1112233455566
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
.+++.++.++++|+||||||.+|+.+|.++|++ ++++|++++........ .... ...... . .......+
T Consensus 156 ~l~~~~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~--~~~~--~~~~~~-~--~~~~~~~~ 228 (326)
T 3d7r_A 156 QLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSN--KDIS--DALIEQ-D--AVLSQFGV 228 (326)
T ss_dssp HHHHHHCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC--TTCC--HHHHHH-C--SSCCHHHH
T ss_pred HHHhccCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCC--hhHH--hhhccc-C--cccCHHHH
Confidence 666777889999999999999999999999988 99999987654322110 0000 000000 0 00000000
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch--HHHHH
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL--ELGRR 261 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~--~~~~~ 261 (315)
..... .+..... . ...........+.. -+|+|+++|++|..++. ...+.
T Consensus 229 ~~~~~-~~~~~~~--------------------------~-~~~~~~~~~~~~~~-~~P~lii~G~~D~~~~~~~~~~~~ 279 (326)
T 3d7r_A 229 NEIMK-KWANGLP--------------------------L-TDKRISPINGTIEG-LPPVYMFGGGREMTHPDMKLFEQM 279 (326)
T ss_dssp HHHHH-HHHTTSC--------------------------T-TSTTTSGGGSCCTT-CCCEEEEEETTSTTHHHHHHHHHH
T ss_pred HHHHH-HhcCCCC--------------------------C-CCCeECcccCCccc-CCCEEEEEeCcccchHHHHHHHHH
Confidence 00000 0000000 0 00000000011222 25999999999976542 12334
Q ss_pred HHhhcCCCcEEEEEcCCCCcccc---CChHHHHHHHHHHHhcCCC
Q 021229 262 LKSHLGDNAQLIVIKKAGHAFNY---EKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 262 l~~~~~~~~~~~~i~~~gH~~~~---e~p~~~~~~i~~fl~~~~~ 303 (315)
+.+.. .++++++++++||.++. ++++++++.|.+||++...
T Consensus 280 l~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 280 MLQHH-QYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp HHHTT-CCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred HHHCC-CcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 44433 57899999999999988 8889999999999987653
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=174.77 Aligned_cols=233 Identities=15% Similarity=0.171 Sum_probs=137.1
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhcc--ccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
++...+| .+.++... +.++.|+||++||+| ++.. .|..+...|. .+|.|+++|+||+|+|..+.........
T Consensus 60 ~i~~~~g-~i~~~~y~-~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~p~~~~d~~~~ 136 (311)
T 1jji_A 60 TIKGRNG-DIRVRVYQ-QKPDSPVLVYYHGGGFVICSIE-SHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDA 136 (311)
T ss_dssp EEEETTE-EEEEEEEE-SSSSEEEEEEECCSTTTSCCTG-GGHHHHHHHHHHHTSEEEEEECCCTTTSCTTHHHHHHHHH
T ss_pred EecCCCC-cEEEEEEc-CCCCceEEEEECCcccccCChh-HhHHHHHHHHHHhCCEEEEecCCCCCCCCCCCcHHHHHHH
Confidence 3444455 44444332 344567899999988 5654 5888888887 3699999999999998543211111122
Q ss_pred HHHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 103 AECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 103 a~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
.+++.+.++.++++ +++|+||||||.+|+.++.++|++ ++++|++++........ .... .......
T Consensus 137 ~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--~~~~------~~~~~~~ 208 (311)
T 1jji_A 137 TKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPT--PSLL------EFGEGLW 208 (311)
T ss_dssp HHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCC--HHHH------HTSSSCS
T ss_pred HHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCC--ccHH------HhcCCCc
Confidence 44555555666765 899999999999999999999987 99999987655332110 0000 0000000
Q ss_pred CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch
Q 021229 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
......+..+.. .+..... ....... ......+..+ .|+++++|++|.+++.
T Consensus 209 ~~~~~~~~~~~~-~~~~~~~-------------------------~~~~~~~-~p~~~~l~~~-~P~li~~G~~D~l~~~ 260 (311)
T 1jji_A 209 ILDQKIMSWFSE-QYFSREE-------------------------DKFNPLA-SVIFADLENL-PPALIITAEYDPLRDE 260 (311)
T ss_dssp SCCHHHHHHHHH-HHCSSGG-------------------------GGGCTTT-SGGGSCCTTC-CCEEEEEEEECTTHHH
T ss_pred cCCHHHHHHHHH-HhCCCCc-------------------------cCCCccc-CcccccccCC-ChheEEEcCcCcchHH
Confidence 000001111100 0100000 0000000 0001122333 4999999999999863
Q ss_pred H--HHHHHHhhcCCCcEEEEEcCCCCccccCC-----hHHHHHHHHHHHhc
Q 021229 257 E--LGRRLKSHLGDNAQLIVIKKAGHAFNYEK-----PKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~--~~~~l~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl~~ 300 (315)
. ..+.+.+.. .+++++++++++|.+.... .+++.+.+.+||.+
T Consensus 261 ~~~~~~~l~~~g-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 261 GEVFGQMLRRAG-VEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp HHHHHHHHHHTT-CCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcC-CCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 2 344554443 5789999999999876543 47888999999874
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=167.82 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=131.0
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCC---CCCCCC----C--CCCchhHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFG---DSFTTR----P--ERSESFQA 103 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G---~S~~~~----~--~~~~~~~a 103 (315)
++..++|+..++....+|+|||+||++++.. .|..+.+.|.++|+|+++|.+++. .+.... . .......+
T Consensus 14 ~~~~l~~~~~~~~~~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 92 (223)
T 3b5e_A 14 TDLAFPYRLLGAGKESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAET 92 (223)
T ss_dssp CSSSSCEEEESTTSSCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHH
T ss_pred cCCCceEEEeCCCCCCCCEEEEEecCCCCHH-HHHHHHHhcCCCceEEEeCCCCCcCCccccccccCCCcccHHHHHHHH
Confidence 4555666655444445689999999998876 588899999889999999988642 111110 0 00112234
Q ss_pred HHHHHHHHHc----CC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 104 ECVMRVMEAH----SV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 104 ~~~~~~l~~l----~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
+++.++++.+ ++ ++++|+||||||.+|+.++.++|++++++|++++.....
T Consensus 93 ~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------------------- 149 (223)
T 3b5e_A 93 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD----------------------- 149 (223)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-----------------------
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc-----------------------
Confidence 5555555543 43 789999999999999999999999999999886532110
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
. . .....+++|+++++|++|.++|.+
T Consensus 150 ----------------~------~--------------------------------~~~~~~~~P~li~~G~~D~~v~~~ 175 (223)
T 3b5e_A 150 ----------------H------V--------------------------------PATDLAGIRTLIIAGAADETYGPF 175 (223)
T ss_dssp ----------------S------C--------------------------------CCCCCTTCEEEEEEETTCTTTGGG
T ss_pred ----------------c------c--------------------------------ccccccCCCEEEEeCCCCCcCCHH
Confidence 0 0 001235789999999999999999
Q ss_pred HHHHHHhhcCC---CcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 258 LGRRLKSHLGD---NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 258 ~~~~l~~~~~~---~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
.++ +.+.+.. ++++++++ +||.+..+. .+.+.+||++...
T Consensus 176 ~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~----~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 176 VPA-LVTLLSRHGAEVDARIIP-SGHDIGDPD----AAIVRQWLAGPIA 218 (223)
T ss_dssp HHH-HHHHHHHTTCEEEEEEES-CCSCCCHHH----HHHHHHHHHCC--
T ss_pred HHH-HHHHHHHCCCceEEEEec-CCCCcCHHH----HHHHHHHHHhhhh
Confidence 888 8776631 57899999 999986543 3578888876543
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=186.52 Aligned_cols=225 Identities=17% Similarity=0.217 Sum_probs=132.0
Q ss_pred CCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc---CCCceE
Q 021229 44 TRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH---SVKKLS 119 (315)
Q Consensus 44 ~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l---~~~~v~ 119 (315)
.+.+..|+||++||++.+. |......|++ +|+|+++|++|+|.+..........+..+ +.+++... +.++++
T Consensus 153 ~~~~~~P~Vv~~hG~~~~~---~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~~~~~~~d~~~-~~~~l~~~~~v~~~~i~ 228 (422)
T 3k2i_A 153 PGPGPFPGIIDIFGIGGGL---LEYRASLLAGHGFATLALAYYNFEDLPNNMDNISLEYFEE-AVCYMLQHPQVKGPGIG 228 (422)
T ss_dssp SSSCCBCEEEEECCTTCSC---CCHHHHHHHTTTCEEEEEECSSSTTSCSSCSCEETHHHHH-HHHHHHTSTTBCCSSEE
T ss_pred CCCCCcCEEEEEcCCCcch---hHHHHHHHHhCCCEEEEEccCCCCCCCCCcccCCHHHHHH-HHHHHHhCcCcCCCCEE
Confidence 3445678999999987653 3445666754 59999999999998754333323333333 33444433 357999
Q ss_pred EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCC
Q 021229 120 LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSL 199 (315)
Q Consensus 120 lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
|+||||||.+|+.+|.++|+ ++++|++++........+......... .+..... ......... .
T Consensus 229 l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~-~ 292 (422)
T 3k2i_A 229 LLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPP--------LGYDLRR------IKVAFSGLV-D 292 (422)
T ss_dssp EEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECC--------CCBCGGG------CEECTTSCE-E
T ss_pred EEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCC--------cccchhh------cccCcchhH-H
Confidence 99999999999999999997 999998876542211100000000000 0000000 000000000 0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH-HHHHhhc---C-CCcEEEE
Q 021229 200 VPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG-RRLKSHL---G-DNAQLIV 274 (315)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~-~~l~~~~---~-~~~~~~~ 274 (315)
....+ .+ .... ........+.++++|+|+|+|++|.++|.+.. +.+.+.+ + +++++++
T Consensus 293 ~~~~~-~~---------------~~~~-~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~ 355 (422)
T 3k2i_A 293 IVDIR-NA---------------LVGG-YKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIIC 355 (422)
T ss_dssp CTTCB-CC---------------CTTG-GGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHH-hh---------------hhhc-ccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 00000 00 0000 00011234678899999999999999998743 4555443 1 2389999
Q ss_pred EcCCCCcc----------------------------ccCChHHHHHHHHHHHhcCCCCC
Q 021229 275 IKKAGHAF----------------------------NYEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 275 i~~~gH~~----------------------------~~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
++++||.+ +.+.++++.+.|.+||++....+
T Consensus 356 ~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 356 YPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp ETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999997 33557889999999998766543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.5e-22 Score=171.51 Aligned_cols=247 Identities=13% Similarity=0.042 Sum_probs=136.3
Q ss_pred ceeeeeeec--CCCc-eEEE--EEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCC
Q 021229 23 GFRSSVTDL--QDGS-VMHC--WVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFT 92 (315)
Q Consensus 23 ~~~~~~~~~--~~g~-~~~~--~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~ 92 (315)
+.....+++ .+|. .+.+ +.+....+..|+||++||+| ++.. .|..+...+.. +|.|+++|+||+|++..
T Consensus 48 ~~~~~~~~i~~~~g~~~l~~~~~~P~~~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~ 126 (323)
T 1lzl_A 48 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAE-SSDPFCVEVARELGFAVANVEYRLAPETTF 126 (323)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGG-GGHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEecCCCCCceeEEEEEecCCCCCCCcEEEEECCCccccCChh-hhHHHHHHHHHhcCcEEEEecCCCCCCCCC
Confidence 444444444 4563 3444 44322234567899999987 5554 57788888765 59999999999998853
Q ss_pred CCCCCCchhHHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhccc
Q 021229 93 TRPERSESFQAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 93 ~~~~~~~~~~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
+..........+.+.+.++.+++ ++++|+||||||.+|+.++.++|++ +++++++++........ ....
T Consensus 127 ~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~--~~~~--- 201 (323)
T 1lzl_A 127 PGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLET--VSMT--- 201 (323)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCS--HHHH---
T ss_pred CchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCc--hhHH---
Confidence 21110111112333333345555 6899999999999999999999885 88998887654322110 0000
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC--CCCeE
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI--TQPTL 244 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~l 244 (315)
.... .............. .+...... . .. ...............+ .+|++
T Consensus 202 ---~~~~-~~~~~~~~~~~~~~-~~~~~~~~-~-~~---------------------~~~~~~~~sp~~~~~~~~~~P~l 253 (323)
T 1lzl_A 202 ---NFVD-TPLWHRPNAILSWK-YYLGESYS-G-PE---------------------DPDVSIYAAPSRATDLTGLPPTY 253 (323)
T ss_dssp ---HCSS-CSSCCHHHHHHHHH-HHHCTTCC-C-TT---------------------CSCCCTTTCGGGCSCCTTCCCEE
T ss_pred ---Hhcc-CCCCCHHHHHHHHH-HhCCCCcc-c-cc---------------------ccCCCcccCcccCcccCCCChhh
Confidence 0000 00000000011100 00000000 0 00 0000000000000112 26999
Q ss_pred EEEeCCCCCCc--hHHHHHHHhhcCCCcEEEEEcCCCCcccc----CChHHHHHHHHHHHhcCCCC
Q 021229 245 ILWGEHDQIFP--LELGRRLKSHLGDNAQLIVIKKAGHAFNY----EKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 245 vi~G~~D~~~~--~~~~~~l~~~~~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~~~~ 304 (315)
+++|++|.+++ ....+.+.+.- .++++++++++||.... +.++++.+.+.+||++....
T Consensus 254 i~~G~~D~~~~~~~~~~~~l~~~g-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 318 (323)
T 1lzl_A 254 LSTMELDPLRDEGIEYALRLLQAG-VSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318 (323)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTT-CCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred eEECCcCCchHHHHHHHHHHHHcC-CCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999884 22333343332 46899999999997543 33678999999999876654
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=167.45 Aligned_cols=191 Identities=14% Similarity=0.186 Sum_probs=133.5
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcccc----ceEEeecCCCCCCCC--C------CCCC-------C-----CchhHHH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHY----FNVYVPDLLFFGDSF--T------TRPE-------R-----SESFQAE 104 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~----~~vi~~D~~G~G~S~--~------~~~~-------~-----~~~~~a~ 104 (315)
++|||||||++++.. .|..+++.|.+. ++|+.+|++++|.+. . ..|. . +...+++
T Consensus 4 ~~pvv~iHG~~~~~~-~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 4 MAPVIMVPGSSASQN-RFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCCEEEECCCGGGHH-HHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 568999999999886 699999999875 689999988888631 1 1110 0 2234567
Q ss_pred HHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhh-----hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 105 CVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQF-----KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 105 ~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
++.++++.+ +.++++||||||||.++..++.++ |++|+++|+++++.......
T Consensus 83 ~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~------------------ 144 (250)
T 3lp5_A 83 WLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS------------------ 144 (250)
T ss_dssp HHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC------------------
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc------------------
Confidence 777777776 889999999999999999999987 56899999997654221100
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC----CC
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE----HD 251 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~----~D 251 (315)
+ . ... ..+ ..+. . ....+++ ++|+++|+|+ .|
T Consensus 145 -~------------------~---~~~---~~~-~~l~--------~---------~~~~lp~-~vpvl~I~G~~~~~~D 180 (250)
T 3lp5_A 145 -T------------------T---AKT---SMF-KELY--------R---------YRTGLPE-SLTVYSIAGTENYTSD 180 (250)
T ss_dssp -S------------------S---CCC---HHH-HHHH--------H---------TGGGSCT-TCEEEEEECCCCCCTT
T ss_pred -c------------------c---ccC---HHH-HHHH--------h---------ccccCCC-CceEEEEEecCCCCCC
Confidence 0 0 000 001 0000 0 0122333 6899999999 89
Q ss_pred CCCchHHHHHHHhhcCCC-cE--EEEEc--CCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 252 QIFPLELGRRLKSHLGDN-AQ--LIVIK--KAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~-~~--~~~i~--~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
.++|.+.++.+...+++. .. .+.+. +++|..+.++| ++++.|.+||.+...
T Consensus 181 g~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~~~~~ 236 (250)
T 3lp5_A 181 GTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLLAETM 236 (250)
T ss_dssp TBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTSCCCC
T ss_pred ceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHhcccc
Confidence 999999888877776432 22 23343 57799999998 899999999986544
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=167.11 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=124.9
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH--------HcCCCce
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME--------AHSVKKL 118 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~--------~l~~~~v 118 (315)
..|+|||+||++++.. .|..+.+.|.+ +|.|+++|+||.+. . .......+.+.+... .++.+++
T Consensus 48 ~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~~s~~-----~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 120 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPS-TYAGLLSHWASHGFVVAAAETSNAGT-----G-REMLACLDYLVRENDTPYGTYSGKLNTGRV 120 (258)
T ss_dssp CEEEEEEECCTTCCGG-GGHHHHHHHHHHTCEEEEECCSCCTT-----S-HHHHHHHHHHHHHHHSSSSTTTTTEEEEEE
T ss_pred CceEEEEECCCCCCch-hHHHHHHHHHhCCeEEEEecCCCCcc-----H-HHHHHHHHHHHhcccccccccccccCccce
Confidence 4578999999998875 58889998876 59999999995311 1 011112233333322 3455789
Q ss_pred EEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCC
Q 021229 119 SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLS 198 (315)
Q Consensus 119 ~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (315)
+|+||||||.+++.++ .+.++++++++++.... . .
T Consensus 121 ~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~----------------------------------------~-~-- 155 (258)
T 2fx5_A 121 GTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG----------------------------------------L-G-- 155 (258)
T ss_dssp EEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS----------------------------------------T-T--
T ss_pred EEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc----------------------------------------c-c--
Confidence 9999999999999998 55688888877532100 0 0
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHHhhcCCCcEEEEEcC
Q 021229 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSHLGDNAQLIVIKK 277 (315)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~~~~~~~~~~~~i~~ 277 (315)
. ....+.++++|+|+|+|++|.++|.+. .+.+.+....+++++++++
T Consensus 156 -~-------------------------------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 203 (258)
T 2fx5_A 156 -H-------------------------------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGERRY 203 (258)
T ss_dssp -C-------------------------------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHHCSSCEEEEEESS
T ss_pred -c-------------------------------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhccCCCeEEEEECC
Confidence 0 001245688999999999999999886 7777776534689999999
Q ss_pred CCCccccCChHHHHHHHHHHHhcC
Q 021229 278 AGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 278 ~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+||+.+.++++++.+.|.+||++.
T Consensus 204 ~~H~~~~~~~~~~~~~i~~fl~~~ 227 (258)
T 2fx5_A 204 VSHFEPVGSGGAYRGPSTAWFRFQ 227 (258)
T ss_dssp CCTTSSTTTCGGGHHHHHHHHHHH
T ss_pred CCCccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999743
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=190.74 Aligned_cols=226 Identities=21% Similarity=0.298 Sum_probs=146.1
Q ss_pred eeecCCCceEEEEEecCC--CCCCCcEEEEccCCCC--hhhhHHhhHhhccc-cceEEeecCCC---CCCCCCCC-CCCC
Q 021229 28 VTDLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGAN--ALWQWTNIIPHMIH-YFNVYVPDLLF---FGDSFTTR-PERS 98 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~--~~~~w~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~-~~~~ 98 (315)
++...+|..++++...+. .++.|+||++||.+.+ . ..|..+...|++ +|.|+++|+|| ||.|.... ....
T Consensus 337 ~~~~~~g~~i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~ 415 (582)
T 3o4h_A 337 WVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDS-DSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDP 415 (582)
T ss_dssp EEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCC-SSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCT
T ss_pred EEECCCCCEEEEEEEcCCCCCCCCcEEEEECCCcccccc-cccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhhhhhc
Confidence 455557877777654332 2356789999997654 3 357778888865 49999999999 66653211 1111
Q ss_pred chhHHHHHHHHHHHc----CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhh
Q 021229 99 ESFQAECVMRVMEAH----SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKI 174 (315)
Q Consensus 99 ~~~~a~~~~~~l~~l----~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
.....+++.+.++.+ ..++++|+||||||.+++.++.++|++++++|++++...... ....
T Consensus 416 ~~~~~~d~~~~~~~l~~~~~~d~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~------~~~~--------- 480 (582)
T 3o4h_A 416 CGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE------MYEL--------- 480 (582)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHH------HHHT---------
T ss_pred ccccHHHHHHHHHHHHhCCCcceEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHH------Hhhc---------
Confidence 112233333333332 345999999999999999999999999999998865332110 0000
Q ss_pred ccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCC
Q 021229 175 LVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIF 254 (315)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 254 (315)
.......+....+ .. . .+. +. .......+.++++|+|+++|++|..+
T Consensus 481 ----~~~~~~~~~~~~~-~~------~----~~~---------------~~---~~sp~~~~~~i~~P~lii~G~~D~~v 527 (582)
T 3o4h_A 481 ----SDAAFRNFIEQLT-GG------S----REI---------------MR---SRSPINHVDRIKEPLALIHPQNASRT 527 (582)
T ss_dssp ----CCHHHHHHHHHHT-TT------C----HHH---------------HH---HTCGGGGGGGCCSCEEEEEETTCSSS
T ss_pred ----ccchhHHHHHHHc-Cc------C----HHH---------------HH---hcCHHHHHhcCCCCEEEEecCCCCCc
Confidence 0000000111000 00 0 000 00 01122346678999999999999999
Q ss_pred chHHHHHHHhhcC---CCcEEEEEcCCCCccc-cCChHHHHHHHHHHHhcCC
Q 021229 255 PLELGRRLKSHLG---DNAQLIVIKKAGHAFN-YEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 255 ~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~ 302 (315)
|++.++.+++.+. .++++++++++||.+. .++++++.+.+.+||++..
T Consensus 528 ~~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l 579 (582)
T 3o4h_A 528 PLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQR 579 (582)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHc
Confidence 9999888887763 2489999999999987 6778899999999998643
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=176.81 Aligned_cols=241 Identities=15% Similarity=0.146 Sum_probs=137.8
Q ss_pred ceeeeeeecCCC--ceEEEEEecCC---CCCCCcEEEEccCCC---Chh-hhHHhhHhhcc--ccceEEeecCCCCCCCC
Q 021229 23 GFRSSVTDLQDG--SVMHCWVPKTR---NDSKPDLVLIHGLGA---NAL-WQWTNIIPHMI--HYFNVYVPDLLFFGDSF 91 (315)
Q Consensus 23 ~~~~~~~~~~~g--~~~~~~~~~~~---~~~~~~vvllHG~~~---~~~-~~w~~~~~~l~--~~~~vi~~D~~G~G~S~ 91 (315)
|...+.+.+..+ ..+..+.+... +++.|+||++||.+. +.. ..|..+...|. .+|.|+++|+||+|++.
T Consensus 52 ~v~~~~v~~~~~~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~ 131 (338)
T 2o7r_A 52 PVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR 131 (338)
T ss_dssp SEEEEEEEEETTTTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC
T ss_pred CEEEEEEEecCCCCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC
Confidence 455566666444 44555554322 245678999999762 211 23778888886 46999999999987653
Q ss_pred CCCCCCCchhHHHHHHHHHHH------------cCCCceEEEEEchhHHHHHHHHHhhhh--------hhceeEEeeCCC
Q 021229 92 TTRPERSESFQAECVMRVMEA------------HSVKKLSLVGLSYGGFVGYSMAAQFKE--------KIEKVVICCSGV 151 (315)
Q Consensus 92 ~~~~~~~~~~~a~~~~~~l~~------------l~~~~v~lvGhSmGG~ia~~~a~~~p~--------~v~~lil~~~~~ 151 (315)
.+ ...+++.+.++. ++.++++|+||||||.+|+.+|.++|+ +++++|++++..
T Consensus 132 ~~-------~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~ 204 (338)
T 2o7r_A 132 LP-------AAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGF 204 (338)
T ss_dssp TT-------HHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCC
T ss_pred Cc-------hHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCcc
Confidence 21 122333333322 234789999999999999999999998 899999987654
Q ss_pred ccCchhhhhhhhcccchhhhhhhccCC-CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcc
Q 021229 152 CLEEQDLRDRMFKVSDLEEASKILVPQ-SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKD 230 (315)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (315)
......... .. ....+. .......+... +...... ...... ..+...
T Consensus 205 ~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~--------------------~~~~~~ 252 (338)
T 2o7r_A 205 GGSKRTGSE--LR--------LANDSRLPTFVLDLIWEL-SLPMGAD-RDHEYC--------------------NPTAES 252 (338)
T ss_dssp CCSSCCHHH--HH--------TTTCSSSCHHHHHHHHHH-HSCTTCC-TTSTTT--------------------CCC---
T ss_pred CCCcCChhh--hc--------cCCCcccCHHHHHHHHHH-hCCCCCC-CCCccc--------------------CCCCCC
Confidence 322110000 00 000000 00111111111 1100000 000000 000000
Q ss_pred c---cccccccCCCCeEEEEeCCCCCCchH--HHHHHHhhcCCCcEEEEEcCCCCccccCCh---HHHHHHHHHHHhcCC
Q 021229 231 R---KISNIDKITQPTLILWGEHDQIFPLE--LGRRLKSHLGDNAQLIVIKKAGHAFNYEKP---KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 231 ~---~~~~l~~i~~P~lvi~G~~D~~~~~~--~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~~ 302 (315)
. ....+..+.+|+|+++|++|.+++.. ..+.+.+.. +++++++++++||.++.++| +++.+.|.+||.+..
T Consensus 253 ~~~~~~~~l~~~~~P~Lvi~G~~D~~~~~~~~~~~~l~~~~-~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 253 EPLYSFDKIRSLGWRVMVVGCHGDPMIDRQMELAERLEKKG-VDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp -CCTHHHHHHHHTCEEEEEEETTSTTHHHHHHHHHHHHHTT-CEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred cccccHhhhcCCCCCEEEEECCCCcchHHHHHHHHHHHHCC-CcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 0 01123346679999999999998743 244444433 56899999999999988777 899999999998654
Q ss_pred C
Q 021229 303 P 303 (315)
Q Consensus 303 ~ 303 (315)
.
T Consensus 332 ~ 332 (338)
T 2o7r_A 332 T 332 (338)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-22 Score=173.65 Aligned_cols=224 Identities=10% Similarity=0.056 Sum_probs=144.7
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc-CCCceEEEEEch
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH-SVKKLSLVGLSY 125 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l-~~~~v~lvGhSm 125 (315)
+++++|+|+||++++.. .|..+.+.|..+|+|+++|+||||.+.. ...+...+++++.+.+..+ +.++++|+||||
T Consensus 99 g~~~~l~~lhg~~~~~~-~~~~l~~~L~~~~~v~~~d~~g~~~~~~--~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S~ 175 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIIGIQSPRPNGPMQ--TAANLDEVCEAHLATLLEQQPHGPYYLLGYSL 175 (329)
T ss_dssp CSSCEEEEECCTTSCCG-GGGGGGGTSCTTCEEEEECCCTTTSHHH--HCSSHHHHHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCcEEEEeCCcccch-HHHHHHHhcCCCCeEEEeeCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 45789999999999874 6999999998889999999999997742 2345556677766666665 567999999999
Q ss_pred hHHHHHHHHHh---hhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 126 GGFVGYSMAAQ---FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 126 GG~ia~~~a~~---~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||.+|+++|.+ +|++|.+++++++....... +...... .+.......+.......+..... ....
T Consensus 176 Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 243 (329)
T 3tej_A 176 GGTLAQGIAARLRARGEQVAFLGLLDTWPPETQN-WQEKEAN---------GLDPEVLAEINREREAFLAAQQG--STST 243 (329)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHH-TC--------------CCCCTHHHHHHHHHHHHHHTTCC--CSCC
T ss_pred CHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccc-ccccccc---------ccChhhHHHHHHHHHHHHHhccc--cccH
Confidence 99999999999 89999999999875532110 0000000 00000000011111111111100 0111
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCcc
Q 021229 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282 (315)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~ 282 (315)
.....+ ....... ...+ ... ....+++|+++++|++|...+.+....+.+.. ++.+++.++ |||+.
T Consensus 244 ~~~~~~----~~~~~~~-~~~~---~~~----~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~-~~~~~~~v~-g~H~~ 309 (329)
T 3tej_A 244 ELFTTI----EGNYADA-VRLL---TTA----HSVPFDGKATLFVAERTLQEGMSPERAWSPWI-AELDIYRQD-CAHVD 309 (329)
T ss_dssp HHHHHH----HHHHHHH-HHHH---TTC----CCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE-EEEEEEEES-SCGGG
T ss_pred HHHHHH----HHHHHHH-HHHH---hcC----CCCCcCCCeEEEEeccCCCCCCCchhhHHHhc-CCcEEEEec-CChHH
Confidence 111111 1111111 1111 111 23467899999999999888777667777777 578999997 79999
Q ss_pred ccCCh--HHHHHHHHHHHh
Q 021229 283 NYEKP--KEFYKHLKSFLL 299 (315)
Q Consensus 283 ~~e~p--~~~~~~i~~fl~ 299 (315)
+++.| +.+.+.|.+||.
T Consensus 310 ~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 310 IISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp GGSTTTHHHHHHHHHHHHC
T ss_pred hCCChHHHHHHHHHHHHhc
Confidence 98887 789999999985
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=168.60 Aligned_cols=234 Identities=12% Similarity=0.108 Sum_probs=132.4
Q ss_pred eeeeeec--CCCceEEEEEe-cCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCC
Q 021229 25 RSSVTDL--QDGSVMHCWVP-KTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPE 96 (315)
Q Consensus 25 ~~~~~~~--~~g~~~~~~~~-~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~ 96 (315)
....+++ .+| .+.++.. +.+.+..|+||++||.| ++.. .|..+...|+. +|.|+++|+||+|++..+.
T Consensus 64 ~~~~~~i~~~~~-~i~~~iy~P~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~p~-- 139 (323)
T 3ain_A 64 KIEDITIPGSET-NIKARVYYPKTQGPYGVLVYYHGGGFVLGDIE-SYDPLCRAITNSCQCVTISVDYRLAPENKFPA-- 139 (323)
T ss_dssp EEEEEEEECSSS-EEEEEEEECSSCSCCCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH--
T ss_pred EEEEEEecCCCC-eEEEEEEecCCCCCCcEEEEECCCccccCChH-HHHHHHHHHHHhcCCEEEEecCCCCCCCCCcc--
Confidence 3344444 345 4554433 22344568899999943 5554 58888888875 6999999999999874321
Q ss_pred CCchhHHHHHHHHH---HHc-CCCceEEEEEchhHHHHHHHHHhhhhhh---ceeEEeeCCCccCchhhhhhhhcccchh
Q 021229 97 RSESFQAECVMRVM---EAH-SVKKLSLVGLSYGGFVGYSMAAQFKEKI---EKVVICCSGVCLEEQDLRDRMFKVSDLE 169 (315)
Q Consensus 97 ~~~~~~a~~~~~~l---~~l-~~~~v~lvGhSmGG~ia~~~a~~~p~~v---~~lil~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
......+.+..+. +.+ +.++++|+||||||.+|+.++.++|+++ +++|++++........ ... .
T Consensus 140 -~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~--~~~------~ 210 (323)
T 3ain_A 140 -AVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLIT--KSL------Y 210 (323)
T ss_dssp -HHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCC--HHH------H
T ss_pred -hHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCC--ccH------H
Confidence 1111111222222 223 4678999999999999999999999887 8888887654322110 000 0
Q ss_pred hhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC
Q 021229 170 EASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249 (315)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 249 (315)
..... .......+..+.. .+.... ........ ......+..+ .|+|+++|+
T Consensus 211 ~~~~~-~~l~~~~~~~~~~-~~~~~~-------------------------~~~~~~~~-sp~~~~l~~l-~P~lii~G~ 261 (323)
T 3ain_A 211 DNGEG-FFLTREHIDWFGQ-QYLRSF-------------------------ADLLDFRF-SPILADLNDL-PPALIITAE 261 (323)
T ss_dssp HHSSS-SSSCHHHHHHHHH-HHCSSG-------------------------GGGGCTTT-CGGGSCCTTC-CCEEEEEET
T ss_pred HhccC-CCCCHHHHHHHHH-HhCCCC-------------------------cccCCccc-CcccCcccCC-CHHHEEECC
Confidence 00000 0000000111000 000000 00000000 0000122333 399999999
Q ss_pred CCCCCc--hHHHHHHHhhcCCCcEEEEEcCCCCcccc-----CChHHHHHHHHHHHhcC
Q 021229 250 HDQIFP--LELGRRLKSHLGDNAQLIVIKKAGHAFNY-----EKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 250 ~D~~~~--~~~~~~l~~~~~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 301 (315)
+|.+++ ...++.+.+.- .+++++++++++|.+.. +.++++.+.+.+||++.
T Consensus 262 ~D~l~~~~~~~a~~l~~ag-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 319 (323)
T 3ain_A 262 HDPLRDQGEAYANKLLQSG-VQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKV 319 (323)
T ss_dssp TCTTHHHHHHHHHHHHHTT-CCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHcC-CCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHH
Confidence 999985 22333333332 46899999999999876 44589999999999754
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=162.58 Aligned_cols=180 Identities=13% Similarity=0.161 Sum_probs=124.1
Q ss_pred CCCCCCcEEEEccCCCChhhhHHhhHhhcccc------ceEEeecCCCCCCC-----------------CC-CCCCCCch
Q 021229 45 RNDSKPDLVLIHGLGANALWQWTNIIPHMIHY------FNVYVPDLLFFGDS-----------------FT-TRPERSES 100 (315)
Q Consensus 45 ~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~------~~vi~~D~~G~G~S-----------------~~-~~~~~~~~ 100 (315)
.++..|+|||+||++++.. .|..+...+... ++|+++|.++++.+ .. ........
T Consensus 19 ~~~~~p~vv~lHG~g~~~~-~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 19 AGRHSASLIFLHGSGDSGQ-GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp SSCCCEEEEEECCTTCCHH-HHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCCCcEEEEEecCCCchh-hHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 4456789999999999886 588887777543 89999888643211 00 00111223
Q ss_pred hHHHHHHHHHHH-----cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 101 FQAECVMRVMEA-----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 101 ~~a~~~~~~l~~-----l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
...+++..++++ ++.++++|+||||||.+|+.++.++|++++++|++++.......
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 345667777766 35689999999999999999999999999999988654321100
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC-eEEEEeCCCCCC
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP-TLILWGEHDQIF 254 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~ 254 (315)
. ..... ....++| +++++|++|.++
T Consensus 159 ----------------------------~-~~~~~-------------------------~~~~~~pp~li~~G~~D~~v 184 (239)
T 3u0v_A 159 ----------------------------V-YQALQ-------------------------KSNGVLPELFQCHGTADELV 184 (239)
T ss_dssp ----------------------------H-HHHHH-------------------------HCCSCCCCEEEEEETTCSSS
T ss_pred ----------------------------H-HHHHH-------------------------hhccCCCCEEEEeeCCCCcc
Confidence 0 00000 0123466 999999999999
Q ss_pred chHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 255 PLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 255 ~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
|.+.++.+.+.+. .++++++++++||.+.. +..+.+.+||.+..
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l 231 (239)
T 3u0v_A 185 LHSWAEETNSMLKSLGVTTKFHSFPNVYHELSK----TELDILKLWILTKL 231 (239)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCH----HHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCH----HHHHHHHHHHHHhC
Confidence 9988887776652 36899999999999884 34555666666544
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-21 Score=162.48 Aligned_cols=203 Identities=18% Similarity=0.187 Sum_probs=132.0
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceE----EeecCCCCC------CCC----CC-------CCCCCchhHHHHH
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNV----YVPDLLFFG------DSF----TT-------RPERSESFQAECV 106 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~v----i~~D~~G~G------~S~----~~-------~~~~~~~~~a~~~ 106 (315)
+++||||+||++++.. .|..+++.|.+.+++ +++|..++| .+. .+ ....+...+++++
T Consensus 2 ~~~pvvllHG~~~~~~-~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l 80 (254)
T 3ds8_A 2 DQIPIILIHGSGGNAS-SLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWL 80 (254)
T ss_dssp CCCCEEEECCTTCCTT-TTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHH
T ss_pred CCCCEEEECCCCCCcc-hHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHH
Confidence 3578999999999886 699999999876554 444333333 221 11 1123444456666
Q ss_pred ----HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh-----hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 107 ----MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE-----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 107 ----~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
.++.+.+++++++||||||||++++.++.++|+ +|+++|+++++....... ... .. +
T Consensus 81 ~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~--~~~---~~-------~-- 146 (254)
T 3ds8_A 81 KIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPN--DNG---MD-------L-- 146 (254)
T ss_dssp HHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHH--HHC---SC-------T--
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccc--ccc---cc-------c--
Confidence 556667788999999999999999999999998 899999997754332110 000 00 0
Q ss_pred CCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC------CC
Q 021229 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE------HD 251 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~------~D 251 (315)
.+.. .+.. ...+ ..+ .. ....++. ++|++.|+|+ .|
T Consensus 147 ------------~~~~------~p~~-~~~~-~~~--------~~---------~~~~~~~-~~~vl~I~G~~~~~~~~D 188 (254)
T 3ds8_A 147 ------------SFKK------LPNS-TPQM-DYF--------IK---------NQTEVSP-DLEVLAIAGELSEDNPTD 188 (254)
T ss_dssp ------------TCSS------CSSC-CHHH-HHH--------HH---------TGGGSCT-TCEEEEEEEESBTTBCBC
T ss_pred ------------cccc------CCcc-hHHH-HHH--------HH---------HHhhCCC-CcEEEEEEecCCCCCCCC
Confidence 0000 1110 0111 100 00 1112333 6899999999 99
Q ss_pred CCCchHHHHHHHhhcCCC---cEEEEEcC--CCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 252 QIFPLELGRRLKSHLGDN---AQLIVIKK--AGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~~~~---~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
.+||...++.++..++.+ .+..++.+ ++|....++|+ +.+.|..||++....
T Consensus 189 g~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~-v~~~i~~fL~~~~~~ 245 (254)
T 3ds8_A 189 GIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPK-SIEKTYWFLEKFKTD 245 (254)
T ss_dssp SSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHH-HHHHHHHHHHTCCCS
T ss_pred cEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHH-HHHHHHHHHHHhcCC
Confidence 999999999888777432 33455655 77999999995 899999999876443
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-21 Score=167.29 Aligned_cols=216 Identities=13% Similarity=0.066 Sum_probs=126.4
Q ss_pred CCCCcEEEEccCCC---Chh-hhHHhhHhhcc--ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH------cC
Q 021229 47 DSKPDLVLIHGLGA---NAL-WQWTNIIPHMI--HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA------HS 114 (315)
Q Consensus 47 ~~~~~vvllHG~~~---~~~-~~w~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~------l~ 114 (315)
++.|+||++||.|. +.. ..|..+...|+ .+|.|+++|+||++++..+ ....+..+.+..+.+. .+
T Consensus 111 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~~---~~~~D~~~~~~~l~~~~~~~~~~d 187 (351)
T 2zsh_A 111 DIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYP---CAYDDGWIALNWVNSRSWLKSKKD 187 (351)
T ss_dssp SSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---HHHHHHHHHHHHHHTCGGGCCTTT
T ss_pred CCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCCc---hhHHHHHHHHHHHHhCchhhcCCC
Confidence 34578999999553 221 23788888887 4699999999998765321 1111112222222221 24
Q ss_pred CC-ceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC-CCchHHHHHHHh
Q 021229 115 VK-KLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP-QSPGKLKELMRY 189 (315)
Q Consensus 115 ~~-~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 189 (315)
.+ +++|+||||||.+|+.+|.++|+ +++++|++++.......... .. ... ..+ ...........
T Consensus 188 ~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~--~~------~~~--~~~~~~~~~~~~~~~- 256 (351)
T 2zsh_A 188 SKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTES--EK------SLD--GKYFVTVRDRDWYWK- 256 (351)
T ss_dssp SSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHH--HH------HHT--TTSSCCHHHHHHHHH-
T ss_pred CCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChh--hh------hcC--CCcccCHHHHHHHHH-
Confidence 56 99999999999999999999998 89999998765432211000 00 000 000 00000111110
Q ss_pred hhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC-CeEEEEeCCCCCCchH--HHHHHHhhc
Q 021229 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ-PTLILWGEHDQIFPLE--LGRRLKSHL 266 (315)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G~~D~~~~~~--~~~~l~~~~ 266 (315)
.+...... . .. .....+ ......+.++++ |+|+++|++|.+++.. ..+.+.+..
T Consensus 257 ~~~~~~~~-~-~~-------------------~~~~~~--~~~~~~l~~i~~pP~Lii~G~~D~~~~~~~~~~~~l~~~g 313 (351)
T 2zsh_A 257 AFLPEGED-R-EH-------------------PACNPF--SPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAG 313 (351)
T ss_dssp HHSCTTCC-T-TS-------------------TTTCTT--STTSCCCTTCCCCEEEEEEETTSTTHHHHHHHHHHHHHTT
T ss_pred HhCCCCCC-C-CC-------------------cccCCC--CCCccchhhCCCCCEEEEEcCCCcchHHHHHHHHHHHHcC
Confidence 00000000 0 00 000000 001234566677 9999999999998632 233333332
Q ss_pred CCCcEEEEEcCCCCcccc----CChHHHHHHHHHHHhc
Q 021229 267 GDNAQLIVIKKAGHAFNY----EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 267 ~~~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~ 300 (315)
.++++++++++||.++. ++++++.+.|.+||++
T Consensus 314 -~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~ 350 (351)
T 2zsh_A 314 -QEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNA 350 (351)
T ss_dssp -CCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC
T ss_pred -CCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 47899999999998887 7899999999999974
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-22 Score=190.06 Aligned_cols=222 Identities=14% Similarity=0.149 Sum_probs=145.6
Q ss_pred eeecCCC-ceEEEEEecCCC----CCCCcEEEEccCCCChh--hhHHh----hHhhccc-cceEEeecCCCCCCCCCCCC
Q 021229 28 VTDLQDG-SVMHCWVPKTRN----DSKPDLVLIHGLGANAL--WQWTN----IIPHMIH-YFNVYVPDLLFFGDSFTTRP 95 (315)
Q Consensus 28 ~~~~~~g-~~~~~~~~~~~~----~~~~~vvllHG~~~~~~--~~w~~----~~~~l~~-~~~vi~~D~~G~G~S~~~~~ 95 (315)
.+...+| ..++++...+.+ ++.|+||++||.+.+.. ..|.. +.+.|++ +|.|+++|+||+|.|.....
T Consensus 459 ~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~~~~ 538 (706)
T 2z3z_A 459 TIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAFE 538 (706)
T ss_dssp EEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCHHHH
T ss_pred EEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccchhHH
Confidence 4555678 788887654322 23478999999765541 13543 4666654 69999999999998853210
Q ss_pred ----CCCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc
Q 021229 96 ----ERSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165 (315)
Q Consensus 96 ----~~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 165 (315)
........+++.+.++.+ +.++++|+||||||.+++.+|.++|++++++|++++.......
T Consensus 539 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~--------- 609 (706)
T 2z3z_A 539 QVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY--------- 609 (706)
T ss_dssp HTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS---------
T ss_pred HHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH---------
Confidence 111112234455555443 2468999999999999999999999999999988654321100
Q ss_pred cchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEE
Q 021229 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv 245 (315)
. ..+.+ .+...+. .....+ .. ......+.++++|+|+
T Consensus 610 -~-------------~~~~~----~~~~~~~------~~~~~~-~~------------------~~~~~~~~~i~~P~li 646 (706)
T 2z3z_A 610 -A-------------IMYGE----RYFDAPQ------ENPEGY-DA------------------ANLLKRAGDLKGRLML 646 (706)
T ss_dssp -B-------------HHHHH----HHHCCTT------TCHHHH-HH------------------HCGGGGGGGCCSEEEE
T ss_pred -H-------------hhhhh----hhcCCcc------cChhhh-hh------------------CCHhHhHHhCCCCEEE
Confidence 0 00000 1111110 000011 00 0122345678899999
Q ss_pred EEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++|++|..+|.+.++.+.+.+. .+.++++++++||.++.++++++.+.|.+||++.
T Consensus 647 i~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 705 (706)
T 2z3z_A 647 IHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLYETITRYFTDH 705 (706)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCSSCCTTHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999999999998888887762 3469999999999999888999999999999753
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-22 Score=171.34 Aligned_cols=231 Identities=13% Similarity=0.137 Sum_probs=130.7
Q ss_pred eecCCCceEEEEEecCC--CCCCCcEEEEcc---CCCChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchh
Q 021229 29 TDLQDGSVMHCWVPKTR--NDSKPDLVLIHG---LGANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESF 101 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~--~~~~~~vvllHG---~~~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~ 101 (315)
+...+| .+.++...+. .+..|+||++|| ++++.. .|..+...|.. +|.|+++|+||+|++..+. ...
T Consensus 53 i~~~~g-~l~~~~~~P~~~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~d~rg~~~~~~~~----~~~ 126 (310)
T 2hm7_A 53 MDLPGR-TLKVRMYRPEGVEPPYPALVYYHGGSWVVGDLE-THDPVCRVLAKDGRAVVFSVDYRLAPEHKFPA----AVE 126 (310)
T ss_dssp EEETTE-EEEEEEEECTTCCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH----HHH
T ss_pred eccCCC-eEEEEEEecCCCCCCCCEEEEECCCccccCChh-HhHHHHHHHHHhcCCEEEEeCCCCCCCCCCCc----cHH
Confidence 344455 5565543222 345678999999 666664 58888888875 4999999999999764221 111
Q ss_pred HHHHHHHHHHHc----C--CCceEEEEEchhHHHHHHHHHhhhh----hhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 102 QAECVMRVMEAH----S--VKKLSLVGLSYGGFVGYSMAAQFKE----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 102 ~a~~~~~~l~~l----~--~~~v~lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
....+.+++... + .++++|+||||||.+|+.++.++|+ +++++|++++........... .....
T Consensus 127 d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~------~~~~~ 200 (310)
T 2hm7_A 127 DAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPA------SIEEN 200 (310)
T ss_dssp HHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCH------HHHHT
T ss_pred HHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCc------chhhc
Confidence 122223333222 2 4689999999999999999999998 689999987654332100000 00000
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHD 251 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 251 (315)
... .......+..+. ..+.... ...............+..+ .|+|+++|++|
T Consensus 201 ~~~-~~~~~~~~~~~~-~~~~~~~-------------------------~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D 252 (310)
T 2hm7_A 201 AEG-YLLTGGMMLWFR-DQYLNSL-------------------------EELTHPWFSPVLYPDLSGL-PPAYIATAQYD 252 (310)
T ss_dssp SSS-SSSCHHHHHHHH-HHHCSSG-------------------------GGGGCTTTCGGGCSCCTTC-CCEEEEEEEEC
T ss_pred CCC-CCCCHHHHHHHH-HHhCCCC-------------------------CccCCccCCCCcCccccCC-CCEEEEEecCC
Confidence 000 000000000000 0000000 0000000000001123333 39999999999
Q ss_pred CCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-----CChHHHHHHHHHHHhcC
Q 021229 252 QIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-----EKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 301 (315)
.+++ .++.+++.+ +.++++++++++||.+.. ++++++.+.+.+||++.
T Consensus 253 ~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~ 308 (310)
T 2hm7_A 253 PLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 308 (310)
T ss_dssp TTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHH
T ss_pred CchH--HHHHHHHHHHHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHH
Confidence 9872 344444333 245899999999996553 56689999999999753
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=178.74 Aligned_cols=225 Identities=18% Similarity=0.212 Sum_probs=128.6
Q ss_pred CCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC--CCceEE
Q 021229 44 TRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS--VKKLSL 120 (315)
Q Consensus 44 ~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~--~~~v~l 120 (315)
.+.+..|+||++||++.+. |......|++ +|.|+++|++|+|.+..........+..+.+..+.+..+ .+++.|
T Consensus 169 ~~~~~~P~Vv~lhG~~~~~---~~~~a~~La~~Gy~Vla~D~rG~~~~~~~~~~~~~~d~~~a~~~l~~~~~vd~~~i~l 245 (446)
T 3hlk_A 169 PEPGPFPGIVDMFGTGGGL---LEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGL 245 (446)
T ss_dssp SSSCCBCEEEEECCSSCSC---CCHHHHHHHTTTCEEEEECCSSSTTSCSCCSEEEHHHHHHHHHHHHTSTTBCCSSEEE
T ss_pred CCCCCCCEEEEECCCCcch---hhHHHHHHHhCCCEEEEeccCCCCCCCcchhhCCHHHHHHHHHHHHhCCCCCCCCEEE
Confidence 3445568999999987753 2223666654 599999999999987543222223333333333333323 378999
Q ss_pred EEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCC
Q 021229 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
+||||||.+|+.+|.++|+ ++++|++++.................. .+..... ..........+
T Consensus 246 ~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~------~~~~~~~~~~~- 309 (446)
T 3hlk_A 246 LGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPP--------VGVNRNR------IKVTKDGYADI- 309 (446)
T ss_dssp EEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECC--------CCBCGGG------CEECSSSCEEC-
T ss_pred EEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCc--------cccchhc------cccccchHHHH-
Confidence 9999999999999999997 899988866443221100000000000 0000000 00000000000
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHHHhhc---C-CCcEEEEE
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRLKSHL---G-DNAQLIVI 275 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l~~~~---~-~~~~~~~i 275 (315)
...+. +. .. .........+.++++|+|+|+|++|.++|.+ .++.+.+.+ + ++++++++
T Consensus 310 ~~~~~-~~---------------~~-~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~ 372 (446)
T 3hlk_A 310 VDVLN-SP---------------LE-GPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICY 372 (446)
T ss_dssp TTCBC-CT---------------TS-GGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHHHh-ch---------------hh-ccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 00000 00 00 0000112236778999999999999999983 334555443 1 23799999
Q ss_pred cCCCCccc----------------------------cCChHHHHHHHHHHHhcCCCC
Q 021229 276 KKAGHAFN----------------------------YEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 276 ~~~gH~~~----------------------------~e~p~~~~~~i~~fl~~~~~~ 304 (315)
+++||.+. .+.++++.+.|.+||++....
T Consensus 373 pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~ 429 (446)
T 3hlk_A 373 PETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGG 429 (446)
T ss_dssp TTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999882 233678899999999876543
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-21 Score=162.43 Aligned_cols=97 Identities=15% Similarity=0.229 Sum_probs=81.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC-CceEEEEEc
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV-KKLSLVGLS 124 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~-~~v~lvGhS 124 (315)
++++++|||+||++++.. .|..+.+.|. ++|+++|+++. .+..+...+++++.+.++.++. ++++|+|||
T Consensus 21 ~~~~~~l~~~hg~~~~~~-~~~~~~~~L~--~~v~~~d~~~~------~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS 91 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTRA------APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYS 91 (283)
T ss_dssp CSSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCTT------SCCSCHHHHHHHHHHHHTTTCCSSCCEEEEET
T ss_pred CCCCCeEEEECCCCCCHH-HHHHHHHhcC--ceEEEEecCCC------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 446789999999999885 6999999997 99999999642 2345666678888888888864 789999999
Q ss_pred hhHHHHHHHHHhh---hhhhc---eeEEeeCCC
Q 021229 125 YGGFVGYSMAAQF---KEKIE---KVVICCSGV 151 (315)
Q Consensus 125 mGG~ia~~~a~~~---p~~v~---~lil~~~~~ 151 (315)
|||.+|+++|.++ |+++. +++++++.+
T Consensus 92 ~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 92 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred HhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 9999999999977 88899 999998754
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=166.52 Aligned_cols=210 Identities=11% Similarity=0.076 Sum_probs=138.5
Q ss_pred cEEEEcc--CCCChhhhHHhhHhhccccceEEeecCCCCCCCCC---CCCCCCchhHHHHHHHHHHHc-CCCceEEEEEc
Q 021229 51 DLVLIHG--LGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT---TRPERSESFQAECVMRVMEAH-SVKKLSLVGLS 124 (315)
Q Consensus 51 ~vvllHG--~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~---~~~~~~~~~~a~~~~~~l~~l-~~~~v~lvGhS 124 (315)
+|+|+|| ++++. +.|..+...|...++|+++|+||||.|.. .....+...+++++.+.++.+ ...+++|+|||
T Consensus 91 ~l~~~hg~g~~~~~-~~~~~l~~~L~~~~~v~~~d~~G~g~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~~~p~~l~G~S 169 (319)
T 2hfk_A 91 VLVGCTGTAANGGP-HEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVVLLGHA 169 (319)
T ss_dssp EEEEECCCCTTCST-TTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEEEEEET
T ss_pred cEEEeCCCCCCCcH-HHHHHHHHhcCCCCceEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 8999998 45555 46999999999889999999999998721 223455666777788888776 46789999999
Q ss_pred hhHHHHHHHHHhhhh----hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCC
Q 021229 125 YGGFVGYSMAAQFKE----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200 (315)
Q Consensus 125 mGG~ia~~~a~~~p~----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
|||.+|+++|.++|+ +|++++++++......... . ..... ...+.+.. . . .
T Consensus 170 ~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~-~---------~~~~~-------l~~~~~~~----~-~---~ 224 (319)
T 2hfk_A 170 GGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPI-E---------VWSRQ-------LGEGLFAG----E-L---E 224 (319)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHH-H---------HTHHH-------HHHHHHHT----C-S---S
T ss_pred HHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHH-H---------HHHHH-------hhHHHHHh----h-c---c
Confidence 999999999999875 4999999987543221100 0 00000 00011111 0 0 0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHHhhcCCCcEEEEEcCCC
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~~~~~~~~~~~~i~~~g 279 (315)
+ ....++ ..+ ..+ ...+.. .....+++|+++++| +|.+++.+. .+.+.+..+.+.+++.++ +|
T Consensus 225 ~-~~~~~~-~~~-~~~----~~~~~~-------~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~~~~~~~~v~-g~ 288 (319)
T 2hfk_A 225 P-MSDARL-LAM-GRY----ARFLAG-------PRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWDLPHTVADVP-GD 288 (319)
T ss_dssp C-CCHHHH-HHH-HHH----HHHHHS-------CCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCSSCSEEEEES-SC
T ss_pred c-cchHHH-HHH-HHH----HHHHHh-------CCCCCcCCCEEEEEc-CCCCCCccccccchhhcCCCCCEEEEeC-CC
Confidence 0 111111 111 000 111111 124678999999999 999988765 555555554467999998 69
Q ss_pred Ccccc-CChHHHHHHHHHHHhcCC
Q 021229 280 HAFNY-EKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 280 H~~~~-e~p~~~~~~i~~fl~~~~ 302 (315)
|+.++ ++|+++++.|.+||.+..
T Consensus 289 H~~~~~e~~~~~~~~i~~~L~~~~ 312 (319)
T 2hfk_A 289 HFTMMRDHAPAVAEAVLSWLDAIE 312 (319)
T ss_dssp TTHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHhHHHHHHHHHHHHHhcC
Confidence 99755 899999999999997643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=187.37 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=147.1
Q ss_pred eeeecCCC-ceEEEEEecCCC----CCCCcEEEEccCCCChh--hhHH-----hhHhhcc-ccceEEeecCCCCCCCCCC
Q 021229 27 SVTDLQDG-SVMHCWVPKTRN----DSKPDLVLIHGLGANAL--WQWT-----NIIPHMI-HYFNVYVPDLLFFGDSFTT 93 (315)
Q Consensus 27 ~~~~~~~g-~~~~~~~~~~~~----~~~~~vvllHG~~~~~~--~~w~-----~~~~~l~-~~~~vi~~D~~G~G~S~~~ 93 (315)
..+...+| ..++++...+.+ +..|+||++||++.+.. ..|. .+.+.|+ .+|.|+++|+||+|.|...
T Consensus 490 ~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~ 569 (741)
T 2ecf_A 490 GTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRD 569 (741)
T ss_dssp EEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHH
T ss_pred EEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCChh
Confidence 34555688 888888764322 23568899999876531 1244 4666674 4699999999999997532
Q ss_pred CC----CCCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh
Q 021229 94 RP----ERSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163 (315)
Q Consensus 94 ~~----~~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 163 (315)
.. ........+++.+.++.+ +.++++|+||||||.+++.++.++|++++++|++++...... .
T Consensus 570 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~-------~ 642 (741)
T 2ecf_A 570 FGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL-------Y 642 (741)
T ss_dssp HHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG-------S
T ss_pred hhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh-------h
Confidence 11 011112244445544443 346899999999999999999999999999998865432210 0
Q ss_pred cccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCe
Q 021229 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 243 (315)
. ..+. ..+... +......+. .......+.++++|+
T Consensus 643 ---~-------------~~~~----~~~~~~------~~~~~~~~~-------------------~~~~~~~~~~i~~P~ 677 (741)
T 2ecf_A 643 ---D-------------SHYT----ERYMDL------PARNDAGYR-------------------EARVLTHIEGLRSPL 677 (741)
T ss_dssp ---B-------------HHHH----HHHHCC------TGGGHHHHH-------------------HHCSGGGGGGCCSCE
T ss_pred ---c-------------cccc----hhhcCC------cccChhhhh-------------------hcCHHHHHhhCCCCE
Confidence 0 0000 011111 000000110 001223456788999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+++|++|..+|.+.++.+.+.+. ...++++++++||.++.+.++++.+.|.+||++.
T Consensus 678 lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~ 738 (741)
T 2ecf_A 678 LLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKHGLSGADALHRYRVAEAFLGRC 738 (741)
T ss_dssp EEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEECCCCCCCCCCchhHHHHHHHHHHHHh
Confidence 999999999999998888887762 2359999999999999888899999999999764
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-21 Score=158.71 Aligned_cols=203 Identities=15% Similarity=0.145 Sum_probs=131.4
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcccc---ceEEeecCCCCCCCCCC--------CC----------CCCchhHHHH
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHY---FNVYVPDLLFFGDSFTT--------RP----------ERSESFQAEC 105 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~---~~vi~~D~~G~G~S~~~--------~~----------~~~~~~~a~~ 105 (315)
.+.+|||||||++++.. .|..+++.|.+. ++|+.+|++++|.+... .| ......++++
T Consensus 4 ~~~~pvvliHG~~~~~~-~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 4 IKTTATLFLHGYGGSER-SETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp -CCEEEEEECCTTCCGG-GTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCCCcEEEECCCCCChh-HHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 34679999999999886 699999999875 47999999999875210 11 1111223444
Q ss_pred HHHHH----HHcCCCceEEEEEchhHHHHHHHHHhhhh-----hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhcc
Q 021229 106 VMRVM----EAHSVKKLSLVGLSYGGFVGYSMAAQFKE-----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILV 176 (315)
Q Consensus 106 ~~~~l----~~l~~~~v~lvGhSmGG~ia~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (315)
+.+++ +.+++++++||||||||.+++.++.++|+ +|+++|+++++...... .+. . ..
T Consensus 83 l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~--~~~--~-~~--------- 148 (249)
T 3fle_A 83 IKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILN--MNE--N-VN--------- 148 (249)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTT--TSS--C-TT---------
T ss_pred HHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCccc--ccC--C-cc---------
Confidence 44444 45588999999999999999999999974 79999999765432110 000 0 00
Q ss_pred CCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC------C
Q 021229 177 PQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE------H 250 (315)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~------~ 250 (315)
.. .+.... .|......+ ..+ .. ....+++.++|+|.|+|+ .
T Consensus 149 ---~~--------~~~~~g----~p~~~~~~~-~~l---------------~~--~~~~~p~~~~~vl~I~G~~~~~~~s 195 (249)
T 3fle_A 149 ---EI--------IVDKQG----KPSRMNAAY-RQL---------------LS--LYKIYCGKEIEVLNIYGDLEDGSHS 195 (249)
T ss_dssp ---TS--------CBCTTC----CBSSCCHHH-HHT---------------GG--GHHHHTTTTCEEEEEEEECCSSSCB
T ss_pred ---hh--------hhcccC----CCcccCHHH-HHH---------------HH--HHhhCCccCCeEEEEeccCCCCCCC
Confidence 00 000000 011111111 111 00 122345577999999998 6
Q ss_pred CCCCchHHHHHHHhhcCCC---cEEEEEcC--CCCccccCChHHHHHHHHHHH
Q 021229 251 DQIFPLELGRRLKSHLGDN---AQLIVIKK--AGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~~---~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 298 (315)
|..||...++.+...+... .+.+++.| +.|....++| ++.+.|.+||
T Consensus 196 DG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~-~V~~~I~~FL 247 (249)
T 3fle_A 196 DGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENK-DVANEIIQFL 247 (249)
T ss_dssp SSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCH-HHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCH-HHHHHHHHHh
Confidence 9999999887776665322 24456655 9999999987 8889999998
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-21 Score=157.71 Aligned_cols=207 Identities=13% Similarity=0.090 Sum_probs=131.3
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCC-CceEEEEEchh
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSV-KKLSLVGLSYG 126 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~-~~v~lvGhSmG 126 (315)
++++|+|+||++++.. .|..+.+.|.+ ++|+++|+||+|. .++++.++++.+.. ++++|+|||||
T Consensus 16 ~~~~l~~~hg~~~~~~-~~~~~~~~l~~-~~v~~~d~~g~~~------------~~~~~~~~i~~~~~~~~~~l~G~S~G 81 (230)
T 1jmk_C 16 QEQIIFAFPPVLGYGL-MYQNLSSRLPS-YKLCAFDFIEEED------------RLDRYADLIQKLQPEGPLTLFGYSAG 81 (230)
T ss_dssp CSEEEEEECCTTCCGG-GGHHHHHHCTT-EEEEEECCCCSTT------------HHHHHHHHHHHHCCSSCEEEEEETHH
T ss_pred CCCCEEEECCCCCchH-HHHHHHHhcCC-CeEEEecCCCHHH------------HHHHHHHHHHHhCCCCCeEEEEECHh
Confidence 4578999999998875 69999999988 9999999999873 24456677777764 57999999999
Q ss_pred HHHHHHHHHhhh---hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcc
Q 021229 127 GFVGYSMAAQFK---EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSC 203 (315)
Q Consensus 127 G~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (315)
|.+|+++|.+++ +++++++++++........+... .. ...+.+++.. ...........
T Consensus 82 g~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~----~~------------~~~~~~~~~~---~~~~~~~~~~~ 142 (230)
T 1jmk_C 82 CSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGR----TV------------ESDVEALMNV---NRDNEALNSEA 142 (230)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC------------------------CCHHHHHHH---TTTCSGGGSHH
T ss_pred HHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccc----cH------------HHHHHHHHhc---ChhhhhhhhHH
Confidence 999999999886 46899999876432211100000 00 0001111110 00000000111
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC--c
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH--A 281 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH--~ 281 (315)
+...+.. .......... .......+++|+++++|++|..++.. ...+.+...++.+++.+++ || +
T Consensus 143 ~~~~~~~-----~~~~~~~~~~------~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~w~~~~~~~~~~~~i~g-~H~~~ 209 (230)
T 1jmk_C 143 VKHGLKQ-----KTHAFYSYYV------NLISTGQVKADIDLLTSGADFDIPEW-LASWEEATTGAYRMKRGFG-THAEM 209 (230)
T ss_dssp HHHHHHH-----HHHHHHHHHH------HCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGBSSCEEEEECSS-CGGGT
T ss_pred HHHHHHH-----HHHHHHHHhh------hccccccccccEEEEEeCCCCCCccc-cchHHHhcCCCeEEEEecC-ChHHH
Confidence 1111100 0000000000 01234678999999999999998733 3445555544689999986 99 8
Q ss_pred cccCChHHHHHHHHHHHhc
Q 021229 282 FNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 282 ~~~e~p~~~~~~i~~fl~~ 300 (315)
+..++++.+++.|.+||.+
T Consensus 210 ~~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 210 LQGETLDRNAGILLEFLNT 228 (230)
T ss_dssp TSHHHHHHHHHHHHHHHTC
T ss_pred cCcHhHHHHHHHHHHHHhh
Confidence 8888999999999999975
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=169.01 Aligned_cols=244 Identities=14% Similarity=0.060 Sum_probs=135.2
Q ss_pred eeecCCCceEEE--EEecCCCCCCCcEEEEccCC---CChh-hhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCC-Cc
Q 021229 28 VTDLQDGSVMHC--WVPKTRNDSKPDLVLIHGLG---ANAL-WQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPER-SE 99 (315)
Q Consensus 28 ~~~~~~g~~~~~--~~~~~~~~~~~~vvllHG~~---~~~~-~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~-~~ 99 (315)
++...+|..+.+ |.+....++.|+||++||.+ ++.. ..|..+...|. .+|.|+++|+||+|.|+...+.. ..
T Consensus 86 ~~~~~~g~~l~~~v~~p~~~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~~~~~~~~~ 165 (361)
T 1jkm_A 86 TILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEGHHPFPSGV 165 (361)
T ss_dssp EEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTEECCTTHHH
T ss_pred eeecCCCCeEEEEEEeCCCCCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCCCCCCCccH
Confidence 344456644444 44422122457899999976 4443 04777788877 57999999999997554221111 11
Q ss_pred hh---HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHh-----hhhhhceeEEeeCCCccCchhhhhh-hhcccchhh
Q 021229 100 SF---QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ-----FKEKIEKVVICCSGVCLEEQDLRDR-MFKVSDLEE 170 (315)
Q Consensus 100 ~~---~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~-----~p~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~ 170 (315)
.+ ..+++.+.++.++.++++|+||||||.+++.++.. +|++++++|++++............ .........
T Consensus 166 ~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
T 1jkm_A 166 EDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSLVE 245 (361)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHHHH
T ss_pred HHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccccCcchhh
Confidence 11 13344444555677899999999999999999998 7889999999876543310000000 000000000
Q ss_pred hhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 171 ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
... .......+..+. ..+...... .... .... .......+..+. |+|+++|++
T Consensus 246 ~~~--~~~~~~~~~~~~-~~~~~~~~~-~~~~--------------------~~~p--~~~~~~~l~~l~-P~Lii~G~~ 298 (361)
T 1jkm_A 246 NDG--YFIENGGMALLV-RAYDPTGEH-AEDP--------------------IAWP--YFASEDELRGLP-PFVVAVNEL 298 (361)
T ss_dssp TTT--SSSCHHHHHHHH-HHHSSSSTT-TTCT--------------------TTCG--GGCCHHHHTTCC-CEEEEEETT
T ss_pred ccC--cccCHHHHHHHH-HHhCCCCCC-CCCc--------------------ccCc--cccChhhHcCCC-ceEEEEcCc
Confidence 000 000000011110 001000000 0000 0000 000012234555 999999999
Q ss_pred CCCCchHHHHHHHhhc---CCCcEEEEEcCCCCccc-c-----CCh-HHHHHHHHHHHhc
Q 021229 251 DQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFN-Y-----EKP-KEFYKHLKSFLLD 300 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~-~-----e~p-~~~~~~i~~fl~~ 300 (315)
|.+++ .++.+++.+ +.++++++++++||.++ . +++ +++.+.|.+||++
T Consensus 299 D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~ 356 (361)
T 1jkm_A 299 DPLRD--EGIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAAD 356 (361)
T ss_dssp CTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHH
T ss_pred Ccchh--hHHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHH
Confidence 99987 444444443 24569999999999887 3 344 8889999999975
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-19 Score=155.78 Aligned_cols=240 Identities=13% Similarity=0.116 Sum_probs=137.2
Q ss_pred cceeeeeeecCCCceEEEEEecCCCCCCCc-EEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCC
Q 021229 22 LGFRSSVTDLQDGSVMHCWVPKTRNDSKPD-LVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRP 95 (315)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~ 95 (315)
.+.+...+++ +|..+ + .+. +.+.+++ ||++||.| ++.. .|..+...|.. +|.|+++|+|+++++..+
T Consensus 56 ~~~~~~~~~~-~g~~~-~-~p~-~~~~~~~~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-- 128 (322)
T 3k6k_A 56 EGVELTLTDL-GGVPC-I-RQA-TDGAGAAHILYFHGGGYISGSPS-THLVLTTQLAKQSSATLWSLDYRLAPENPFP-- 128 (322)
T ss_dssp TTCEEEEEEE-TTEEE-E-EEE-CTTCCSCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTCEEEEECCCCTTTSCTT--
T ss_pred CCceEEEEEE-CCEeE-E-ecC-CCCCCCeEEEEEcCCcccCCChH-HHHHHHHHHHHhcCCEEEEeeCCCCCCCCCc--
Confidence 3455555666 57666 4 332 3445667 99999965 4554 58888888864 699999999998765321
Q ss_pred CCCchhHHHHHHHHHHH-cCCCceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhh
Q 021229 96 ERSESFQAECVMRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEE 170 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~-l~~~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 170 (315)
....+....+..+++. .+.++++|+||||||.+|+.++.++|++ ++++|++++............ .
T Consensus 129 -~~~~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~--------~ 199 (322)
T 3k6k_A 129 -AAVDDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNS--------N 199 (322)
T ss_dssp -HHHHHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHH--------H
T ss_pred -hHHHHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchh--------h
Confidence 1122223333333344 4567999999999999999999999987 899999876554321110000 0
Q ss_pred hhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 171 ASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
....-.......+..+..... ..... .. ..............|+|+++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~---------------------------~~-~~~sp~~~~~~~~pP~li~~G~~ 250 (322)
T 3k6k_A 200 LADRDFLAEPDTLGEMSELYV-GGEDR---------------------------KN-PLISPVYADLSGLPEMLIHVGSE 250 (322)
T ss_dssp TGGGCSSSCHHHHHHHHHHHH-TTSCT---------------------------TC-TTTCGGGSCCTTCCCEEEEEESS
T ss_pred ccCCCCcCCHHHHHHHHHHhc-CCCCC---------------------------CC-CcCCcccccccCCCcEEEEECCc
Confidence 000000000011111110000 00000 00 00000000112236999999999
Q ss_pred CCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-----CChHHHHHHHHHHHhcCCCCCCCC
Q 021229 251 DQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-----EKPKEFYKHLKSFLLDSQPSPLPP 308 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~~~~~~~~ 308 (315)
|.+++ .++.+++.+ +.++++++++++||.++. ++++++.+.+.+||.+........
T Consensus 251 D~~~~--~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~~~ 314 (322)
T 3k6k_A 251 EALLS--DSTTLAERAGAAGVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKLAAA 314 (322)
T ss_dssp CTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC-----
T ss_pred CccHH--HHHHHHHHHHHCCCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhccchh
Confidence 98853 344444333 246799999999998764 446799999999999877655433
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=156.16 Aligned_cols=203 Identities=9% Similarity=0.069 Sum_probs=132.1
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEEch
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGLSY 125 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSm 125 (315)
+++++|||+||++++.. .|..+.+.|...++|+++|+||++. .++++.+.++.+. .++++|+||||
T Consensus 20 ~~~~~l~~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~~~------------~~~~~~~~i~~~~~~~~~~l~GhS~ 86 (244)
T 2cb9_A 20 QGGKNLFCFPPISGFGI-YFKDLALQLNHKAAVYGFHFIEEDS------------RIEQYVSRITEIQPEGPYVLLGYSA 86 (244)
T ss_dssp CCSSEEEEECCTTCCGG-GGHHHHHHTTTTSEEEEECCCCSTT------------HHHHHHHHHHHHCSSSCEEEEEETH
T ss_pred CCCCCEEEECCCCCCHH-HHHHHHHHhCCCceEEEEcCCCHHH------------HHHHHHHHHHHhCCCCCEEEEEECH
Confidence 35679999999998875 6999999998889999999998742 3566777777775 57899999999
Q ss_pred hHHHHHHHHHhhh---hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 126 GGFVGYSMAAQFK---EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 126 GG~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||.+|+++|.+++ +++.+++++++...... ...... ...+. . ....
T Consensus 87 Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~------~~~~~~----------------~~~~~-----~----~~~~ 135 (244)
T 2cb9_A 87 GGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS------ITADTE----------------NDDSA-----A----YLPE 135 (244)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC------CCCC----------------------------C----CSCH
T ss_pred hHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc------cccccc----------------HHHHH-----H----HhHH
Confidence 9999999999875 57899999876542110 000000 00000 0 0011
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC--CCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE--HDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~--~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
.+...+... ......... .......+++|+++++|+ +|.+ +++..+.+.+..+.+.+++++++ ||
T Consensus 136 ~~~~~~~~~-----~~~~~~~~~------~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~~~~~~~~i~g-gH 202 (244)
T 2cb9_A 136 AVRETVMQK-----KRCYQEYWA------QLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAEEGYAEYTGYG-AH 202 (244)
T ss_dssp HHHHHHTHH-----HHHHHHHHH------HCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBSSCEEEEECSS-BG
T ss_pred HHHHHHHHH-----HHHHHHHHH------hhccCCCcCCCEEEEEccCccccc-cccchhHHHHhcCCCCEEEEecC-Ch
Confidence 111111000 000000000 012346789999999999 8874 44445556666544689999986 99
Q ss_pred --ccccCChHHHHHHHHHHHhcCCCCCC
Q 021229 281 --AFNYEKPKEFYKHLKSFLLDSQPSPL 306 (315)
Q Consensus 281 --~~~~e~p~~~~~~i~~fl~~~~~~~~ 306 (315)
++..++|+.+++.|.+||.+......
T Consensus 203 ~~~~~~~~~~~~~~~i~~~L~~~~~~~~ 230 (244)
T 2cb9_A 203 KDMLEGEFAEKNANIILNILDKINSDQK 230 (244)
T ss_dssp GGTTSHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHcChHHHHHHHHHHHHHHhcCccCCe
Confidence 77778899999999999987655443
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-20 Score=177.19 Aligned_cols=232 Identities=16% Similarity=0.146 Sum_probs=147.3
Q ss_pred eecCCCceEEEEEecCC--------CCCCCcEEEEccCCCChh-hhHHhhHhhccc-cceEEeecCCC---CCCCCCCCC
Q 021229 29 TDLQDGSVMHCWVPKTR--------NDSKPDLVLIHGLGANAL-WQWTNIIPHMIH-YFNVYVPDLLF---FGDSFTTRP 95 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~--------~~~~~~vvllHG~~~~~~-~~w~~~~~~l~~-~~~vi~~D~~G---~G~S~~~~~ 95 (315)
+...+|..++++...+. +++.|.||++||++.+.. ..|......|++ +|.|+++|+|| ||.|.....
T Consensus 396 ~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~~~~~~ 475 (662)
T 3azo_A 396 FTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRAYRERL 475 (662)
T ss_dssp EECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHHHHHTT
T ss_pred EEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHHHHHhh
Confidence 44457878887765332 234578999999876542 247777777765 49999999999 777642111
Q ss_pred -----CCCchhHHHHHHHHHHH--cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccch
Q 021229 96 -----ERSESFQAECVMRVMEA--HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL 168 (315)
Q Consensus 96 -----~~~~~~~a~~~~~~l~~--l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 168 (315)
.....+..+.+..+++. .+.++++|+||||||.+++.++.+ |++++++|++++....... ... ....
T Consensus 476 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~--~~~--~~~~- 549 (662)
T 3azo_A 476 RGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGW--ADG--GTHD- 549 (662)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHH--HTT--CSCG-
T ss_pred ccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHH--hcc--cccc-
Confidence 11122334445555555 456799999999999999998875 9999999987654321100 000 0000
Q ss_pred hhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEe
Q 021229 169 EEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWG 248 (315)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 248 (315)
. ...+.. .+.... +. ....+. .......+.++++|+|+++|
T Consensus 550 --~-----------~~~~~~-~~~~~~-----~~-~~~~~~-------------------~~sp~~~~~~~~~P~lii~G 590 (662)
T 3azo_A 550 --F-----------ESRYLD-FLIGSF-----EE-FPERYR-------------------DRAPLTRADRVRVPFLLLQG 590 (662)
T ss_dssp --G-----------GTTHHH-HHTCCT-----TT-CHHHHH-------------------HTCGGGGGGGCCSCEEEEEE
T ss_pred --h-----------hhHhHH-HHhCCC-----cc-chhHHH-------------------hhChHhHhccCCCCEEEEee
Confidence 0 000000 011110 00 000000 00122346678899999999
Q ss_pred CCCCCCchHHHHHHHhhcCC---CcEEEEEcCCCCccc-cCChHHHHHHHHHHHhcCCCCC
Q 021229 249 EHDQIFPLELGRRLKSHLGD---NAQLIVIKKAGHAFN-YEKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~~---~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~~~ 305 (315)
++|..+|++.++.+.+.+.. ..++++++++||.+. .++++++.+.+.+||.+....+
T Consensus 591 ~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 591 LEDPVCPPEQCDRFLEAVAGCGVPHAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp TTCSSSCTHHHHHHHHHHTTSCCCEEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999888731 249999999999874 4677899999999998766543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-22 Score=171.42 Aligned_cols=215 Identities=13% Similarity=0.114 Sum_probs=136.2
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~ 108 (315)
++..+.++.+....+..|+||++||.+ ++.. .|..+...|.+ +|.|+++|+||+|.+..+..........+.+.+
T Consensus 66 ~~~~~~~~~p~~~~~~~p~vv~~HGgg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~r~~~~~~~~~~~~d~~~~~~~l~~ 144 (303)
T 4e15_A 66 GRQLVDVFYSEKTTNQAPLFVFVHGGYWQEMDMS-MSCSIVGPLVRRGYRVAVMDYNLCPQVTLEQLMTQFTHFLNWIFD 144 (303)
T ss_dssp TTCEEEEEECTTCCTTCCEEEEECCSTTTSCCGG-GSCTTHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEecCCCCCCCCEEEEECCCcCcCCChh-HHHHHHHHHHhCCCEEEEecCCCCCCCChhHHHHHHHHHHHHHHH
Confidence 345677776533345678999999943 3333 46667776654 599999999999876311100000011222333
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhh-----h--hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQF-----K--EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-----p--~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
..+.++.++++|+||||||.+++.++.+. | ++++++|++++....... ..... .. .
T Consensus 145 ~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~--~~~~~--~~---~---------- 207 (303)
T 4e15_A 145 YTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLREL--SNLES--VN---P---------- 207 (303)
T ss_dssp HHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHH--HTCTT--TS---G----------
T ss_pred HhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhh--hcccc--cc---h----------
Confidence 33466788999999999999999999854 3 479999988765432110 00000 00 0
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccc-cccc----cCCCCeEEEEeCCCCCCch
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKI-SNID----KITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~----~i~~P~lvi~G~~D~~~~~ 256 (315)
...+... +... ...... ..+. .+++|+|+++|++|.+++.
T Consensus 208 ------~~~~~~~------~~~~-----------------------~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~ 252 (303)
T 4e15_A 208 ------KNILGLN------ERNI-----------------------ESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFI 252 (303)
T ss_dssp ------GGTTCCC------TTTT-----------------------TTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHH
T ss_pred ------hhhhcCC------HHHH-----------------------HHcCchhhcccccccCCCCCEEEEEeCCCCCCch
Confidence 0000000 0000 000000 1233 3489999999999999999
Q ss_pred HHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 257 ELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.++.+++.+. .++++++++++||+.++|.+...+..+.+||.+
T Consensus 253 ~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 299 (303)
T 4e15_A 253 EQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETAIDDSDVSRFLRN 299 (303)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGGSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHhCCCcHHHHHHHH
Confidence 99888887762 357999999999999999999999999988864
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=155.66 Aligned_cols=191 Identities=16% Similarity=0.148 Sum_probs=120.4
Q ss_pred CCCcEEEEccCCCChhhhHHh----hHhhccc-cceEEeecCC---------------------CCCCCCCCC---C---
Q 021229 48 SKPDLVLIHGLGANALWQWTN----IIPHMIH-YFNVYVPDLL---------------------FFGDSFTTR---P--- 95 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~----~~~~l~~-~~~vi~~D~~---------------------G~G~S~~~~---~--- 95 (315)
.+|+|||+||++++.. .|.. +.+.|.+ +|+|+++|+| |+|.+.... .
T Consensus 4 ~~~~vl~lHG~g~~~~-~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~~~~ 82 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGK-VFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSEISH 82 (243)
T ss_dssp CCCEEEEECCTTCCHH-HHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCSSGG
T ss_pred cCceEEEeCCCCccHH-HHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCCCcc
Confidence 3578999999999986 4764 4455555 6999999999 455542110 0
Q ss_pred CCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhh------hceeEEeeCCCccCchhhhhhhhcccchh
Q 021229 96 ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK------IEKVVICCSGVCLEEQDLRDRMFKVSDLE 169 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~------v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
........+.+.+.++..+ +++.|+||||||.+|+.+|.+++.. ++.++++++....... . .
T Consensus 83 ~~d~~~~~~~l~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~------~---~-- 150 (243)
T 1ycd_A 83 ELDISEGLKSVVDHIKANG-PYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD------P---E-- 150 (243)
T ss_dssp GCCCHHHHHHHHHHHHHHC-CCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC------T---T--
T ss_pred hhhHHHHHHHHHHHHHhcC-CeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc------c---c--
Confidence 0122223455555555444 6799999999999999999987642 3444444322110000 0 0
Q ss_pred hhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeC
Q 021229 170 EASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGE 249 (315)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 249 (315)
... . . .+..++ . .....+.++++|+|+|+|+
T Consensus 151 ----------------------~~~-~----~-~~~~~~----------------~-----~~~~~~~~~~~P~l~i~G~ 181 (243)
T 1ycd_A 151 ----------------------HPG-E----L-RITEKF----------------R-----DSFAVKPDMKTKMIFIYGA 181 (243)
T ss_dssp ----------------------STT-C----E-EECGGG----------------T-----TTTCCCTTCCCEEEEEEET
T ss_pred ----------------------ccc-c----c-ccchhH----------------H-----HhccCcccCCCCEEEEEeC
Confidence 000 0 0 000000 0 0011345688999999999
Q ss_pred CCCCCchHHHHHHHhhcCCC------cEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 250 HDQIFPLELGRRLKSHLGDN------AQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~~~------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+|.++|.+.++.+++.++.. ...++++++||.+..+ +.+.+.|.+||++..
T Consensus 182 ~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~--~~~~~~i~~fl~~~~ 238 (243)
T 1ycd_A 182 SDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNK--KDIIRPIVEQITSSL 238 (243)
T ss_dssp TCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCC--HHHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCch--HHHHHHHHHHHHHhh
Confidence 99999999999888777321 2566788899998765 358999999997643
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-20 Score=160.65 Aligned_cols=231 Identities=15% Similarity=0.160 Sum_probs=132.7
Q ss_pred eecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 29 TDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
+...+| .+.++...+.+..+|+||++||.| ++.. .|..+...|+. +|.|+++|+|+.++...+. ... .+
T Consensus 68 ~~~~~g-~i~~~~~~p~~~~~p~vv~~HGgg~~~g~~~-~~~~~~~~la~~~g~~V~~~dyr~~p~~~~~~---~~~-D~ 141 (326)
T 3ga7_A 68 VPTPYG-DVTTRLYSPQPTSQATLYYLHGGGFILGNLD-THDRIMRLLARYTGCTVIGIDYSLSPQARYPQ---AIE-ET 141 (326)
T ss_dssp ECCTTS-CEEEEEEESSSSCSCEEEEECCSTTTSCCTT-TTHHHHHHHHHHHCSEEEEECCCCTTTSCTTH---HHH-HH
T ss_pred eecCCC-CeEEEEEeCCCCCCcEEEEECCCCcccCChh-hhHHHHHHHHHHcCCEEEEeeCCCCCCCCCCc---HHH-HH
Confidence 333566 556554433344568999999987 6664 58888888876 7999999999876542111 111 12
Q ss_pred HHHHHHHHHc----C--CCceEEEEEchhHHHHHHHHHhhhhh------hceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 104 ECVMRVMEAH----S--VKKLSLVGLSYGGFVGYSMAAQFKEK------IEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 104 ~~~~~~l~~l----~--~~~v~lvGhSmGG~ia~~~a~~~p~~------v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
....+++... + .++++|+||||||.+|+.++.++|++ +++++++.+........ ......
T Consensus 142 ~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~-~~~~~~------- 213 (326)
T 3ga7_A 142 VAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSV-SRRLFG------- 213 (326)
T ss_dssp HHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCH-HHHHCC-------
T ss_pred HHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCCh-hHhhhc-------
Confidence 2233333332 3 36899999999999999999999986 78888775543222110 000000
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHD 251 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D 251 (315)
..........+..+.. .+.... ...... ........+.+...|+++++|++|
T Consensus 214 -~~~~~l~~~~~~~~~~-~~~~~~-------------------------~~~~~~-~~~~~~~~~~~~~~P~li~~G~~D 265 (326)
T 3ga7_A 214 -GAWDGLTREDLDMYEK-AYLRND-------------------------EDRESP-WYCLFNNDLTRDVPPCFIASAEFD 265 (326)
T ss_dssp -CTTTTCCHHHHHHHHH-HHCSSG-------------------------GGGGCT-TTSGGGSCCSSCCCCEEEEEETTC
T ss_pred -CCCCCCCHHHHHHHHH-HhCCCC-------------------------CccCCc-ccCCCcchhhcCCCCEEEEecCcC
Confidence 0000000001111100 000000 000000 000011233445679999999999
Q ss_pred CCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-----CChHHHHHHHHHHHhcCCC
Q 021229 252 QIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-----EKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 252 ~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~~~ 303 (315)
.+++ .++.+++.+ +..++++++++++|.+.. ++.+++.+.+.+||.+...
T Consensus 266 ~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 266 PLID--DSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMK 323 (326)
T ss_dssp TTHH--HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCHH--HHHHHHHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhc
Confidence 9985 344444333 245799999999998753 3458899999999986543
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-19 Score=153.73 Aligned_cols=244 Identities=13% Similarity=0.156 Sum_probs=136.0
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQA 103 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a 103 (315)
..++.+|..+.++.+. ++..|+||++||.| ++....+..+...+.+ +|+|+++|+|+.++. ......
T Consensus 8 ~~~~~~~~~~~~y~p~--~~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-------~~p~~~ 78 (274)
T 2qru_A 8 NQTLANGATVTIYPTT--TEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-------KIDHIL 78 (274)
T ss_dssp EEECTTSCEEEEECCS--SSSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-------CHHHHH
T ss_pred cccccCCeeEEEEcCC--CCCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-------CCcHHH
Confidence 4566678888877642 14567899999977 4443213556666655 499999999975432 333345
Q ss_pred HHHHHHHHHc----C-CCceEEEEEchhHHHHHHHHHh---hhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 104 ECVMRVMEAH----S-VKKLSLVGLSYGGFVGYSMAAQ---FKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 104 ~~~~~~l~~l----~-~~~v~lvGhSmGG~ia~~~a~~---~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
+++.+.++.+ . .++++|+|+|+||.+|+.++.+ .|.++++++++.+........ .........
T Consensus 79 ~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~-~~~~~~~~~-------- 149 (274)
T 2qru_A 79 RTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIK-EPRKLLKQA-------- 149 (274)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGG-SCCCSCSSC--------
T ss_pred HHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccC-Cchhhcccc--------
Confidence 5555544433 3 7899999999999999999983 466788888775433211000 000000000
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCc-----ccc-ccccccCCCCeEEEEeC
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPK-----DRK-ISNIDKITQPTLILWGE 249 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~l~~i~~P~lvi~G~ 249 (315)
...... . .+...... ........+..................... ... ...+..+ .|+|+++|+
T Consensus 150 --~~~~~~----~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~ 219 (274)
T 2qru_A 150 --ISAKEI----A-AIDQTKPV--WDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASS 219 (274)
T ss_dssp --CCSGGG----T-TSCCSSCC--SCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEET
T ss_pred --ccHHHH----h-hhcccCCC--CCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEec
Confidence 000000 0 00000000 000000000000000000000000000000 000 0123455 799999999
Q ss_pred CCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChH----HHHHHHHHHHhc
Q 021229 250 HDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPK----EFYKHLKSFLLD 300 (315)
Q Consensus 250 ~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~ 300 (315)
.|..++...++.+++.+ ++++++++++++|.++.+.+. ++.+.+.+||++
T Consensus 220 ~D~~~~~~~~~~l~~~~-~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 220 SDEEVPFRYSKKIGRTI-PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp TCSSSCTHHHHHHHHHS-TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCcCHHHHHHHHHhC-CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99999988899999888 689999999999998776553 557888889864
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=151.01 Aligned_cols=177 Identities=16% Similarity=0.201 Sum_probs=120.0
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCC---CCCCC---CCchhHHHHHHHHH---HHcC-
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSF---TTRPE---RSESFQAECVMRVM---EAHS- 114 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~---~~~~~---~~~~~~a~~~~~~l---~~l~- 114 (315)
...+++|||+||+|++.. .|..+.+.|. ..+.|++||.+|++--+ ..... .......+.+..++ ...+
T Consensus 19 ~~a~~~Vv~lHG~G~~~~-~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 97 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTAA-DIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQQNQPALDSALALVGEVVAEIEAQGI 97 (210)
T ss_dssp TTCSEEEEEECCTTCCHH-HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGGGGTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCcEEEEEeCCCCCHH-HHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 344678999999999886 5888888886 45999999999865211 11111 11111122333333 3334
Q ss_pred -CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhcc
Q 021229 115 -VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFK 193 (315)
Q Consensus 115 -~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (315)
.++++|+|+|+||.+++.++.++|+++.+++.+++.......
T Consensus 98 ~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~------------------------------------- 140 (210)
T 4h0c_A 98 PAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL------------------------------------- 140 (210)
T ss_dssp CGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC-------------------------------------
T ss_pred ChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh-------------------------------------
Confidence 468999999999999999999999999999887653311100
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc---CCCc
Q 021229 194 RPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL---GDNA 270 (315)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~ 270 (315)
. .. + . .-..-++|++++||++|+++|.+.++.+.+.+ +.+.
T Consensus 141 --~----~~----~------------------------~--~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v 184 (210)
T 4h0c_A 141 --A----IG----N------------------------Y--KGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAV 184 (210)
T ss_dssp --C----GG----G------------------------C--CBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred --h----hh----h------------------------h--hhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCe
Confidence 0 00 0 0 00112469999999999999999888876654 2357
Q ss_pred EEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 271 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++++|+.||.+. ++++ +.|.+||.+
T Consensus 185 ~~~~ypg~gH~i~---~~el-~~i~~wL~k 210 (210)
T 4h0c_A 185 SQVVYPGRPHTIS---GDEI-QLVNNTILK 210 (210)
T ss_dssp EEEEEETCCSSCC---HHHH-HHHHHTTTC
T ss_pred EEEEECCCCCCcC---HHHH-HHHHHHHcC
Confidence 8999999999874 4454 678888864
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.83 E-value=7.5e-21 Score=182.85 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=140.7
Q ss_pred eeecCCCceEEEEEecCC----CCCCCcEEEEccCCCChh--hhHH--hhHhhcc-ccceEEeecCCCCCCCCC-----C
Q 021229 28 VTDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANAL--WQWT--NIIPHMI-HYFNVYVPDLLFFGDSFT-----T 93 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~--~~w~--~~~~~l~-~~~~vi~~D~~G~G~S~~-----~ 93 (315)
.+...+| .++++...+. +++.|+||++||++.+.. ..|. .....++ .+|.|+++|+||+|.+.. .
T Consensus 472 ~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~ 550 (723)
T 1xfd_A 472 DIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEV 550 (723)
T ss_dssp CEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTT
T ss_pred EEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHH
Confidence 4455677 7777654332 234578999999876521 1232 3445565 469999999999998521 1
Q ss_pred CCCCCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhh----hhhhceeEEeeCCCccCchhhhhhhh
Q 021229 94 RPERSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQF----KEKIEKVVICCSGVCLEEQDLRDRMF 163 (315)
Q Consensus 94 ~~~~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~----p~~v~~lil~~~~~~~~~~~~~~~~~ 163 (315)
..... ....+++.+.++.+ +.++++|+||||||.+++.++.++ |++++++|++++.......
T Consensus 551 ~~~~~-~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~------- 622 (723)
T 1xfd_A 551 RRRLG-LLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY------- 622 (723)
T ss_dssp TTCTT-THHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSS-------
T ss_pred HhccC-cccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHh-------
Confidence 11111 12233334444332 246899999999999999999999 9999999988654322110
Q ss_pred cccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCC-CC
Q 021229 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT-QP 242 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P 242 (315)
. ..+.+ .+...+.. ..... ........+.+++ +|
T Consensus 623 ---~-------------~~~~~----~~~~~~~~--~~~~~-----------------------~~~~~~~~~~~~~~~P 657 (723)
T 1xfd_A 623 ---A-------------SAFSE----RYLGLHGL--DNRAY-----------------------EMTKVAHRVSALEEQQ 657 (723)
T ss_dssp ---B-------------HHHHH----HHHCCCSS--CCSST-----------------------TTTCTHHHHTSCCSCE
T ss_pred ---h-------------hhccH----hhcCCccC--ChhHH-----------------------HhcChhhHHhhcCCCC
Confidence 0 00000 00011000 00000 0000112345688 79
Q ss_pred eEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcc-ccCChHHHHHHHHHHHhcCC
Q 021229 243 TLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 243 ~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 302 (315)
+|+++|++|..+|++.++.+.+.+ +.+.++++++++||.+ ..++++++.+.|.+||.+..
T Consensus 658 ~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l 721 (723)
T 1xfd_A 658 FLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECF 721 (723)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTT
T ss_pred EEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHh
Confidence 999999999999999888887765 2467999999999998 66889999999999998754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-21 Score=164.40 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=75.7
Q ss_pred CCCcEEEEccCCCCh---hhhHHhhHhhccccc---eEEeecCCCCCCCCCCCC--CCCchhHHHHHHHHHHHcC-C-Cc
Q 021229 48 SKPDLVLIHGLGANA---LWQWTNIIPHMIHYF---NVYVPDLLFFGDSFTTRP--ERSESFQAECVMRVMEAHS-V-KK 117 (315)
Q Consensus 48 ~~~~vvllHG~~~~~---~~~w~~~~~~l~~~~---~vi~~D~~G~G~S~~~~~--~~~~~~~a~~~~~~l~~l~-~-~~ 117 (315)
.++||||+||++++. . .|..+.+.|++.| +|+++|+ |||.|..... ......+++++.+.++... . ++
T Consensus 4 ~~~pvVllHG~~~~~~~~~-~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 81 (279)
T 1ei9_A 4 APLPLVIWHGMGDSCCNPL-SMGAIKKMVEKKIPGIHVLSLEI-GKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQG 81 (279)
T ss_dssp SSCCEEEECCTTCCSCCTT-TTHHHHHHHHHHSTTCCEEECCC-SSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTC
T ss_pred CCCcEEEECCCCCCCCCcc-cHHHHHHHHHHHCCCcEEEEEEe-CCCCccccccccccCHHHHHHHHHHHHHhhhhccCC
Confidence 356899999999876 4 5999999998655 9999998 9998742111 1223334455555555421 2 78
Q ss_pred eEEEEEchhHHHHHHHHHhhhhh-hceeEEeeCC
Q 021229 118 LSLVGLSYGGFVGYSMAAQFKEK-IEKVVICCSG 150 (315)
Q Consensus 118 v~lvGhSmGG~ia~~~a~~~p~~-v~~lil~~~~ 150 (315)
++||||||||.++..++.++|++ |+++|+++++
T Consensus 82 ~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 82 YNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp EEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred EEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 99999999999999999999984 9999998754
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.6e-20 Score=158.49 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=132.3
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
++...+|..+.++...+.++..|+||++||.| ++.. .|..+...+.. +|.|+++|+|+.++...+. ...+
T Consensus 64 ~i~~~~G~~i~~~~~~P~~~~~p~vv~~HGgG~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~~p~---~~~D- 138 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAPTPAPVVVYCHAGGFALGNLD-TDHRQCLELARRARCAVVSVDYRLAPEHPYPA---ALHD- 138 (317)
T ss_dssp EEECTTSCEEEEEEEECSCSSEEEEEEECCSTTTSCCTT-TTHHHHHHHHHHHTSEEEEECCCCTTTSCTTH---HHHH-
T ss_pred EecCCCCCeEEEEEEecCCCCCcEEEEECCCcCccCChH-HHHHHHHHHHHHcCCEEEEecCCCCCCCCCch---HHHH-
Confidence 44445675666655433335678999999866 3443 47777777763 5999999999876543211 1111
Q ss_pred HHHHHHHH----HHcCC--CceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhh
Q 021229 103 AECVMRVM----EAHSV--KKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEAS 172 (315)
Q Consensus 103 a~~~~~~l----~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (315)
+....+++ +.+++ ++++|+|||+||.+|+.++.+++++ +.+++++++........ ... ...
T Consensus 139 ~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-~~~--------~~~ 209 (317)
T 3qh4_A 139 AIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTA-SRS--------EFR 209 (317)
T ss_dssp HHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCH-HHH--------HTT
T ss_pred HHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCc-CHH--------Hhc
Confidence 22222333 23554 4899999999999999999998885 88888887655432100 000 000
Q ss_pred hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCC
Q 021229 173 KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQ 252 (315)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 252 (315)
. ............... +..... ............+.. -.|+++++|++|.
T Consensus 210 ~-~~~~~~~~~~~~~~~-~~~~~~---------------------------~~~~~~p~~~~~l~~-lpP~li~~G~~D~ 259 (317)
T 3qh4_A 210 A-TPAFDGEAASLMWRH-YLAGQT---------------------------PSPESVPGRRGQLAG-LPATLITCGEIDP 259 (317)
T ss_dssp T-CSSSCHHHHHHHHHH-HHTTCC---------------------------CCTTTCGGGCSCCTT-CCCEEEEEEEEST
T ss_pred C-CCCcCHHHHHHHHHH-hcCCCC---------------------------CCcccCCCcccccCC-CCceeEEecCcCC
Confidence 0 000000000000000 000000 000000000011111 1499999999999
Q ss_pred CCc--hHHHHHHHhhcCCCcEEEEEcCCCCcc-----ccCChHHHHHHHHHHHhcC
Q 021229 253 IFP--LELGRRLKSHLGDNAQLIVIKKAGHAF-----NYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 253 ~~~--~~~~~~l~~~~~~~~~~~~i~~~gH~~-----~~e~p~~~~~~i~~fl~~~ 301 (315)
+++ ...++.+.+.. .+++++++++++|.+ ..+.++++.+.+.+||++.
T Consensus 260 ~~~~~~~~a~~l~~~g-~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~ 314 (317)
T 3qh4_A 260 FRDEVLDYAQRLLGAG-VSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADA 314 (317)
T ss_dssp THHHHHHHHHHHHHTT-CCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHcC-CCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHH
Confidence 987 45566666554 578999999999983 4566789999999999764
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-20 Score=158.66 Aligned_cols=201 Identities=16% Similarity=0.121 Sum_probs=127.9
Q ss_pred CCCCcEEEEccCCCChhhhHH-hhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 47 DSKPDLVLIHGLGANALWQWT-NIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~-~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
+.+++|||+||++++....|. .+.+.|.+ +|+|+++|+||||.++. .......++.+.++++..+.++++|||||
T Consensus 29 ~~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~~---~~~~~~l~~~i~~~~~~~g~~~v~lVGhS 105 (317)
T 1tca_A 29 SVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSGNNKLPVLTWS 105 (317)
T ss_dssp SCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEET
T ss_pred CCCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCcH---HHHHHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 346789999999998752387 88888875 59999999999997631 11223345666777777788999999999
Q ss_pred hhHHHHHHHHHhhh---hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 125 YGGFVGYSMAAQFK---EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 125 mGG~ia~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
|||.++..++.++| ++|+++|+++++...... . .. ...+ ..... .... ... .
T Consensus 106 ~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~--~-~~---------~~~~-~~~~~---~~~~-----~~~----~ 160 (317)
T 1tca_A 106 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVL--A-GP---------LDAL-AVSAP---SVWQ-----QTT----G 160 (317)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGG--G-HH---------HHHT-TCBCH---HHHH-----TBT----T
T ss_pred hhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcc--h-hh---------hhhh-hhcCc---hHHh-----hCc----C
Confidence 99999999988876 789999998765322110 0 00 0000 00000 0000 000 0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH--HHHHHhhcCCCcEEEEE----
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL--GRRLKSHLGDNAQLIVI---- 275 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~--~~~l~~~~~~~~~~~~i---- 275 (315)
..+.+.+. . . . . ...++|+++|+|+.|.++++.. ++.....+ ++++.+.+
T Consensus 161 ----s~f~~~L~--------~---~---~---~--~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l-~~a~~~~~~~~~ 216 (317)
T 1tca_A 161 ----SALTTALR--------N---A---G---G--LTQIVPTTNLYSATDEIVQPQVSNSPLDSSYL-FNGKNVQAQAVC 216 (317)
T ss_dssp ----CHHHHHHH--------H---T---T---T--TBCSSCEEEEECTTCSSSCCCCSSSTTSTTCC-BTSEEEEHHHHH
T ss_pred ----cHHHHHHH--------h---c---C---C--CCCCCCEEEEEeCCCCeECCccccccchhhhc-cCCccEEeeecc
Confidence 01111100 0 0 0 0 1246899999999999998765 32223334 24444444
Q ss_pred ---cCCCCccccCChHHHHHHHHHHHhc
Q 021229 276 ---KKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 276 ---~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++||..+.++|+.+ ..|.+||..
T Consensus 217 ~~~~~~gH~~~l~~p~~~-~~v~~~L~~ 243 (317)
T 1tca_A 217 GPLFVIDHAGSLTSQFSY-VVGRSALRS 243 (317)
T ss_dssp CTTCCCCTTHHHHBHHHH-HHHHHHHHC
T ss_pred CCCCccCcccccCCHHHH-HHHHHHhcC
Confidence 478999999999764 678999987
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=4.1e-19 Score=151.06 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=83.1
Q ss_pred CCCceEEEEEecC-C--CCCCCcEEEEccCCCChhhhHHh---hHhhccc-cceEEeecCCCCCCCCCCC-CC-------
Q 021229 32 QDGSVMHCWVPKT-R--NDSKPDLVLIHGLGANALWQWTN---IIPHMIH-YFNVYVPDLLFFGDSFTTR-PE------- 96 (315)
Q Consensus 32 ~~g~~~~~~~~~~-~--~~~~~~vvllHG~~~~~~~~w~~---~~~~l~~-~~~vi~~D~~G~G~S~~~~-~~------- 96 (315)
..|..+.++...+ + ++..|+||++||++.+.. .|.. ....+.+ +|.|+++|++|+|.|.... ..
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~ 102 (278)
T 3e4d_A 24 TLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHA-NVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGA 102 (278)
T ss_dssp TTTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTB
T ss_pred ccCCcceEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCc
Confidence 3465555543322 2 345678999999988875 4765 3333333 5999999999999885322 00
Q ss_pred ---------------CCchhHHHHHHHHHHHc-CC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 97 ---------------RSESFQAECVMRVMEAH-SV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 97 ---------------~~~~~~a~~~~~~l~~l-~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
......++++.+++++. ++ ++++|+||||||.+|+.++.++|+++++++++++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 175 (278)
T 3e4d_A 103 GFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIV 175 (278)
T ss_dssp CTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCS
T ss_pred cccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcc
Confidence 00122345566777655 66 789999999999999999999999999999887644
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=146.62 Aligned_cols=201 Identities=17% Similarity=0.122 Sum_probs=117.5
Q ss_pred eeeeeeec-CCCceEEEEEec-CCCCCCCcEEEEccCCCChh-hhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCC--
Q 021229 24 FRSSVTDL-QDGSVMHCWVPK-TRNDSKPDLVLIHGLGANAL-WQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPER-- 97 (315)
Q Consensus 24 ~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~vvllHG~~~~~~-~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~-- 97 (315)
.+++..++ .||.++..+... .+.+..|.||++||++.+.. ..+..+.+.|+. +|.|+++|+||||+|.......
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~ 108 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP 108 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc
Confidence 34444555 488888765433 23344567888899987642 234566777765 5999999999999885322110
Q ss_pred --Cch---------------hHHHHHHHH----HHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch
Q 021229 98 --SES---------------FQAECVMRV----MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ 156 (315)
Q Consensus 98 --~~~---------------~~a~~~~~~----l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~ 156 (315)
... ....+.... ....+.+++.++|+||||.+++.++...|+ ++++++...+....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~~-- 185 (259)
T 4ao6_A 109 TDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEGV-- 185 (259)
T ss_dssp CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTST--
T ss_pred chhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccccccc--
Confidence 000 001111122 223467899999999999999999998884 56555432111000
Q ss_pred hhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccc
Q 021229 157 DLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNI 236 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (315)
. .... ...+
T Consensus 186 --------------------------------------------~---~~~~------------------------~~~a 194 (259)
T 4ao6_A 186 --------------------------------------------N---GEDL------------------------VRLA 194 (259)
T ss_dssp --------------------------------------------T---HHHH------------------------HHHG
T ss_pred --------------------------------------------c---ccch------------------------hhhh
Confidence 0 0000 0123
Q ss_pred ccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 237 DKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 237 ~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++|++|+|+++|++|.++|++.++.+.+.+. ++.+++++++ +|... ...+..+.+.+||.+.
T Consensus 195 ~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~~k~l~~~~G-~H~~~--p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 195 PQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPG-KHSAV--PTWEMFAGTVDYLDQR 257 (259)
T ss_dssp GGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCSSEEEEEESS-CTTCC--CHHHHTHHHHHHHHHH
T ss_pred ccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCCCeEEEEeCC-CCCCc--CHHHHHHHHHHHHHHh
Confidence 5688999999999999999999999998874 4467778776 67432 1246677888888753
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=147.78 Aligned_cols=213 Identities=15% Similarity=0.126 Sum_probs=123.7
Q ss_pred CCCceEEEEEecC-C---CCCCCcEEEEccCCCChhhhHHhh---Hhhcc-ccceEEeecCCCCCCCCCCCC--------
Q 021229 32 QDGSVMHCWVPKT-R---NDSKPDLVLIHGLGANALWQWTNI---IPHMI-HYFNVYVPDLLFFGDSFTTRP-------- 95 (315)
Q Consensus 32 ~~g~~~~~~~~~~-~---~~~~~~vvllHG~~~~~~~~w~~~---~~~l~-~~~~vi~~D~~G~G~S~~~~~-------- 95 (315)
.+|..+.++...+ + +++.|+||++||++.+.. .|... ...+. ..+.|+++|.+++|.+.....
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g~ 104 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE-NFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQGA 104 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSS-HHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTTC
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChh-HHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccCc
Confidence 3455555543222 2 345678999999988764 46553 23333 248999999998776532110
Q ss_pred -------C-------CCchhHHHHHHHHHHH-cCC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh
Q 021229 96 -------E-------RSESFQAECVMRVMEA-HSV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR 159 (315)
Q Consensus 96 -------~-------~~~~~~a~~~~~~l~~-l~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~ 159 (315)
. .......+++..+++. ... ++++|+||||||.+|+.++.++|+++++++++++..........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~ 184 (280)
T 3i6y_A 105 GFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCPWG 184 (280)
T ss_dssp CTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSHHH
T ss_pred cccccccCCCccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCchH
Confidence 0 0022234566666644 455 78999999999999999999999999999988765432211000
Q ss_pred hhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC
Q 021229 160 DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI 239 (315)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 239 (315)
...+...+... . ..+...+. ...+.++
T Consensus 185 ------------------------~~~~~~~~~~~-~----~~~~~~~~------------------------~~~~~~~ 211 (280)
T 3i6y_A 185 ------------------------QKAFTAYLGKD-T----DTWREYDA------------------------SLLMRAA 211 (280)
T ss_dssp ------------------------HHHHHHHHCSC-G----GGTGGGCH------------------------HHHHHHC
T ss_pred ------------------------HHHHHHhcCCc-h----HHHHhcCH------------------------HHHHHhc
Confidence 00001111110 0 00000000 0001112
Q ss_pred --CCCeEEEEeCCCCCCchHH-HHHHHhhc---CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 240 --TQPTLILWGEHDQIFPLEL-GRRLKSHL---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 240 --~~P~lvi~G~~D~~~~~~~-~~~l~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+|+++++|++|.+++.+. .+.+.+.+ +.+++++++++++|.... ...+.+.+.+|+.+
T Consensus 212 ~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~--~~~~~~~~l~~~~~ 276 (280)
T 3i6y_A 212 KQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYF--IASFIEDHLRFHSN 276 (280)
T ss_dssp SSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred CCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHH--HHHhHHHHHHHHHh
Confidence 4799999999999998732 33443332 246799999999997643 23444555555543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=173.66 Aligned_cols=228 Identities=15% Similarity=0.151 Sum_probs=141.6
Q ss_pred cCCCceEEEEEecCC----CCCCCcEEEEccCCCChh--hhHH-hhHhhcc--ccceEEeecCCCCCCCCCCC----CCC
Q 021229 31 LQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANAL--WQWT-NIIPHMI--HYFNVYVPDLLFFGDSFTTR----PER 97 (315)
Q Consensus 31 ~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~--~~w~-~~~~~l~--~~~~vi~~D~~G~G~S~~~~----~~~ 97 (315)
..+|..++++...+. .++.|.||++||.+.+.. ..|. .....+. .+|.|+++|+||+|.+.... ...
T Consensus 480 ~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~ 559 (740)
T 4a5s_A 480 ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRR 559 (740)
T ss_dssp EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTC
T ss_pred ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhh
Confidence 457888888764332 234578899999876521 0122 1223332 57999999999999764210 011
Q ss_pred CchhHHHHHHHHHHH---cC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 98 SESFQAECVMRVMEA---HS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~---l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
......+++.+.++. .+ .+++.|+||||||.+|+.++.++|++++++|++++....... .
T Consensus 560 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~----------~---- 625 (740)
T 4a5s_A 560 LGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYY----------D---- 625 (740)
T ss_dssp TTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGS----------B----
T ss_pred hCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHh----------h----
Confidence 111123344444433 33 278999999999999999999999999999887654322100 0
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC-CeEEEEeCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ-PTLILWGEH 250 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G~~ 250 (315)
..+ ...+...+. .......+. .......+.++++ |+|+++|++
T Consensus 626 ---------~~~----~~~~~~~p~----~~~~~~~~~-------------------~~~~~~~~~~i~~~P~Lii~G~~ 669 (740)
T 4a5s_A 626 ---------SVY----TERYMGLPT----PEDNLDHYR-------------------NSTVMSRAENFKQVEYLLIHGTA 669 (740)
T ss_dssp ---------HHH----HHHHHCCSS----TTTTHHHHH-------------------HSCSGGGGGGGGGSEEEEEEETT
T ss_pred ---------hHH----HHHHcCCCC----ccccHHHHH-------------------hCCHHHHHhcCCCCcEEEEEcCC
Confidence 000 001111110 000000110 0112234566776 999999999
Q ss_pred CCCCchHHHHHHHhhcC---CCcEEEEEcCCCCcc-ccCChHHHHHHHHHHHhcCCCCCCCC
Q 021229 251 DQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAF-NYEKPKEFYKHLKSFLLDSQPSPLPP 308 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~~~~~~~ 308 (315)
|..+|.+.++.+.+.+. .+.++++++++||.+ ..+.++.+.+.+.+||++....+.++
T Consensus 670 D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~~~~ 731 (740)
T 4a5s_A 670 DDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLPAAA 731 (740)
T ss_dssp CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred CCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999998888877652 357999999999998 66788999999999999877654433
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-18 Score=165.81 Aligned_cols=230 Identities=17% Similarity=0.097 Sum_probs=141.5
Q ss_pred eecCCCceEEEEEecCC----CCCCCcEEEEccCCCChh-hhHHhhHhhc-cccceEEeecCCCCCCCCCC---CCC-CC
Q 021229 29 TDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANAL-WQWTNIIPHM-IHYFNVYVPDLLFFGDSFTT---RPE-RS 98 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~-~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~---~~~-~~ 98 (315)
+...||..++++...+. +++.|+||++||.+.... ..|......| ..+|.|+++|+||+|.+... ... ..
T Consensus 422 ~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 422 YASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred EECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 44457888887764322 245788999999544331 1354444434 45699999999998876321 111 11
Q ss_pred chhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhh
Q 021229 99 ESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEAS 172 (315)
Q Consensus 99 ~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (315)
.....+++.+.++.+ +.+++.++||||||.+++.++.++|++++++|+.++...+.... . .
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~---~-~--------- 568 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYH---L-F--------- 568 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG---G-S---------
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhcc---c-c---------
Confidence 112234444544444 34689999999999999999999999999999876544321100 0 0
Q ss_pred hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCC--CCeEEEEeCC
Q 021229 173 KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT--QPTLILWGEH 250 (315)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lvi~G~~ 250 (315)
+.......+ + ..+. . .+..+.+. .......+..++ .|+|+++|++
T Consensus 569 ----~~~~~~~~~-----~-g~~~----~----~~~~~~~~---------------~~sp~~~~~~~~~~~P~Li~~G~~ 615 (695)
T 2bkl_A 569 ----GSGRTWIPE-----Y-GTAE----K----PEDFKTLH---------------AYSPYHHVRPDVRYPALLMMAADH 615 (695)
T ss_dssp ----TTGGGGHHH-----H-CCTT----S----HHHHHHHH---------------HHCGGGCCCSSCCCCEEEEEEETT
T ss_pred ----CCCcchHHH-----h-CCCC----C----HHHHHHHH---------------hcChHhhhhhcCCCCCEEEEeeCC
Confidence 000000000 1 1100 0 01001000 001223345555 6999999999
Q ss_pred CCCCchHHHHHHHhhcC------CCcEEEEEcCCCCccc--cCChHHHHHHHHHHHhcCCCC
Q 021229 251 DQIFPLELGRRLKSHLG------DNAQLIVIKKAGHAFN--YEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~------~~~~~~~i~~~gH~~~--~e~p~~~~~~i~~fl~~~~~~ 304 (315)
|..+|+..++++.+.+. ...++++++++||... .+++.++.+.+.+||.+....
T Consensus 616 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 677 (695)
T 2bkl_A 616 DDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDV 677 (695)
T ss_dssp CSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998888877662 2478999999999983 355677888899999876654
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-17 Score=145.40 Aligned_cols=233 Identities=10% Similarity=0.114 Sum_probs=130.2
Q ss_pred eeeeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCch
Q 021229 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
...++. ++....++.+. +.+..|+||++||.| ++.. .|..+...+.. +|.|+++|+|+.++...+ ....
T Consensus 59 ~~~~~~-~~i~~~~~~p~-~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~vv~~dyr~~p~~~~~---~~~~ 132 (322)
T 3fak_A 59 VEQVTV-AGCAAEWVRAP-GCQAGKAILYLHGGGYVMGSIN-THRSMVGEISRASQAAALLLDYRLAPEHPFP---AAVE 132 (322)
T ss_dssp EEEEEE-TTEEEEEEECT-TCCTTCEEEEECCSTTTSCCHH-HHHHHHHHHHHHHTSEEEEECCCCTTTSCTT---HHHH
T ss_pred EEEEee-CCeEEEEEeCC-CCCCccEEEEEcCCccccCChH-HHHHHHHHHHHhcCCEEEEEeCCCCCCCCCC---cHHH
Confidence 334444 35455555442 344578999999965 3443 47777777765 699999999987654211 1112
Q ss_pred hHHHHHHHHHHH-cCCCceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCCccCchhhhhhhhcccchhhhhhhc
Q 021229 101 FQAECVMRVMEA-HSVKKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKIL 175 (315)
Q Consensus 101 ~~a~~~~~~l~~-l~~~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (315)
+....+..+.+. .+.++++|+||||||.+|+.++.+.|++ +++++++++......... ... ..
T Consensus 133 D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~--~~~------~~---- 200 (322)
T 3fak_A 133 DGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND--SFK------TR---- 200 (322)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT--HHH------HT----
T ss_pred HHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc--CHH------Hh----
Confidence 222233333333 3456899999999999999999999886 888998876554321100 000 00
Q ss_pred cCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 176 VPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
..... .........+....... . . ............+.. ..|+|+++|++|.+++
T Consensus 201 ----------------~~~~~--~~~~~~~~~~~~~~~~~----~-~-~~~~~~sp~~~~~~~-~pP~li~~g~~D~~~~ 255 (322)
T 3fak_A 201 ----------------AEADP--MVAPGGINKMAARYLNG----A-D-AKHPYASPNFANLKG-LPPLLIHVGRDEVLLD 255 (322)
T ss_dssp ----------------TTTCC--SCCSSHHHHHHHHHHTT----S-C-TTCTTTCGGGSCCTT-CCCEEEEEETTSTTHH
T ss_pred ----------------CccCc--ccCHHHHHHHHHHhcCC----C-C-CCCcccCCCcccccC-CChHhEEEcCcCccHH
Confidence 00000 00001111111100000 0 0 000000000111111 2499999999998854
Q ss_pred hHHHHHHHhhc---CCCcEEEEEcCCCCcccc-----CChHHHHHHHHHHHhcCCC
Q 021229 256 LELGRRLKSHL---GDNAQLIVIKKAGHAFNY-----EKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 256 ~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~~~ 303 (315)
.++.+++.+ +..++++++++++|.+.. ++.+++.+.+.+||.+...
T Consensus 256 --~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3fak_A 256 --DSIKLDAKAKADGVKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWA 309 (322)
T ss_dssp --HHHHHHHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHcCCCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 344444333 246799999999997763 4468889999999976543
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.4e-18 Score=143.27 Aligned_cols=204 Identities=17% Similarity=0.146 Sum_probs=124.1
Q ss_pred CCCCcEEEEccCCCChhhhHHh--hHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc------CCC
Q 021229 47 DSKPDLVLIHGLGANALWQWTN--IIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH------SVK 116 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~--~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l------~~~ 116 (315)
++.|+||++||++++.. .|.. .+..+.. ++.|+++|.+++|.+............++++..+++.+ +.+
T Consensus 39 ~~~p~vv~~HG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 117 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHN-SWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPQVLKRFFPNMTSKRE 117 (263)
T ss_dssp CCBCEEEEECCTTCCTT-HHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTTSCBHHHHHHTHHHHHHHHHCTTBCCCGG
T ss_pred CCCCEEEEECCCCCCHH-HHHhccCHHHHHhcCCeEEEEECCCCCccccCCCcccHHHHHHHHHHHHHHHHhccccCCCC
Confidence 35678999999998875 5776 4555544 47788889888877654322222344566777777774 237
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (315)
++.|+||||||.+|+.++. +|+++++++++++....... ..... ...... .....+.....
T Consensus 118 ~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~--~~~~~------------~~~~~~----~~~~~~~~~~~ 178 (263)
T 2uz0_A 118 KTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNF--SPESQ------------NLGSPA----YWRGVFGEIRD 178 (263)
T ss_dssp GEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSC--CGGGT------------TCSCHH----HHHHHHCCCSC
T ss_pred ceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhc--ccccc------------ccccch----hHHHHcCChhh
Confidence 8999999999999999999 99999999998765533210 00000 000000 11111111100
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCC--CCeEEEEeCCCCCCchHHHHHHHhhc---CCCcE
Q 021229 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT--QPTLILWGEHDQIFPLELGRRLKSHL---GDNAQ 271 (315)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~ 271 (315)
..+. ..+....+.++. +|+++++|++|.+++. ++.+.+.+ +.+.+
T Consensus 179 ~~~~----------------------------~~~~~~~~~~~~~~~p~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~ 228 (263)
T 2uz0_A 179 WTTS----------------------------PYSLESLAKKSDKKTKLWAWCGEQDFLYEA--NNLAVKNLKKLGFDVT 228 (263)
T ss_dssp TTTS----------------------------TTSHHHHGGGCCSCSEEEEEEETTSTTHHH--HHHHHHHHHHTTCEEE
T ss_pred hccc----------------------------cCCHHHHHHhccCCCeEEEEeCCCchhhHH--HHHHHHHHHHCCCCeE
Confidence 0000 000001112232 8999999999999853 34444433 23468
Q ss_pred EEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 272 ~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
++++++ ||.... .++..+.+.+||.+...
T Consensus 229 ~~~~~g-~H~~~~--~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 229 YSHSAG-THEWYY--WEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp EEEESC-CSSHHH--HHHHHHHHHHHSSSCCC
T ss_pred EEECCC-CcCHHH--HHHHHHHHHHHHHhhcc
Confidence 999998 997643 24566788888876543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=171.08 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=139.8
Q ss_pred eecCCCceEEEEEecCC----CCCCCcEEEEccCCCChh--hhHH-hhHhhc--cccceEEeecCCCCCCCCCCC---C-
Q 021229 29 TDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANAL--WQWT-NIIPHM--IHYFNVYVPDLLFFGDSFTTR---P- 95 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~--~~w~-~~~~~l--~~~~~vi~~D~~G~G~S~~~~---~- 95 (315)
+...+ ..++++...+. +++.|+||++||++.+.. ..|. .....+ ..+|.|+++|+||+|.|.... .
T Consensus 473 ~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~ 551 (719)
T 1z68_A 473 LEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVY 551 (719)
T ss_dssp EEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGT
T ss_pred EecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHh
Confidence 44444 67777654332 234567999999887642 1232 223333 357999999999999885221 0
Q ss_pred CCCchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchh
Q 021229 96 ERSESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLE 169 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
........+++.+.++.+ +.++++|+||||||.+++.++.++|++++++|++++....... .
T Consensus 552 ~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~----------~-- 619 (719)
T 1z68_A 552 RKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYY----------A-- 619 (719)
T ss_dssp TCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTS----------B--
T ss_pred hccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHh----------c--
Confidence 001112234444444332 2368999999999999999999999999999988654422110 0
Q ss_pred hhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC-CeEEEEe
Q 021229 170 EASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ-PTLILWG 248 (315)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lvi~G 248 (315)
..+.+ .+...+. ... ....+. .......+.++++ |+|+++|
T Consensus 620 -----------~~~~~----~~~g~~~---~~~-~~~~~~-------------------~~~~~~~~~~~~~~P~li~~G 661 (719)
T 1z68_A 620 -----------SVYTE----RFMGLPT---KDD-NLEHYK-------------------NSTVMARAEYFRNVDYLLIHG 661 (719)
T ss_dssp -----------HHHHH----HHHCCSS---TTT-THHHHH-------------------HTCSGGGGGGGTTSEEEEEEE
T ss_pred -----------cccch----hhcCCcc---ccc-chhhhh-------------------hCCHhHHHhcCCCCcEEEEEe
Confidence 00000 0111110 000 000000 0012234567787 8999999
Q ss_pred CCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 249 EHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++|..+|.+.++.+.+.+. ...++++++++||.+..++++++.+.|.+||++.
T Consensus 662 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 717 (719)
T 1z68_A 662 TADDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGLSGLSTNHLYTHMTHFLKQC 717 (719)
T ss_dssp TTCSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999999998888877652 3468999999999997777999999999999754
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.1e-19 Score=149.38 Aligned_cols=214 Identities=14% Similarity=0.057 Sum_probs=120.2
Q ss_pred CCceEEEEEecC-C--CCCCCcEEEEccCCCChhhhHHhh---Hhhcc-ccceEEeecC--CCCCCCCCC----------
Q 021229 33 DGSVMHCWVPKT-R--NDSKPDLVLIHGLGANALWQWTNI---IPHMI-HYFNVYVPDL--LFFGDSFTT---------- 93 (315)
Q Consensus 33 ~g~~~~~~~~~~-~--~~~~~~vvllHG~~~~~~~~w~~~---~~~l~-~~~~vi~~D~--~G~G~S~~~---------- 93 (315)
.|..+.++...+ + +++.|+||++||++.+.. .|... ...+. .+|.|+++|. ||+|.+...
T Consensus 26 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~~~~ 104 (282)
T 3fcx_A 26 LNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAG 104 (282)
T ss_dssp TTEEEEEEEEECGGGGTSCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCCCCC
T ss_pred cCCeeEEEEEcCCCCCCCCCCEEEEEcCCCCCcc-chhhcchHHHHhhcCCeEEEEeccccCccccccccccccccCCcc
Confidence 455555443222 2 244678999999988775 47654 34443 4599999999 666543211
Q ss_pred ----CCCC-------CchhHHHHHHHHHH-HcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh
Q 021229 94 ----RPER-------SESFQAECVMRVME-AHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR 159 (315)
Q Consensus 94 ----~~~~-------~~~~~a~~~~~~l~-~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~ 159 (315)
.+.. ...+..+++.++++ .+++ +++.|+||||||.+|+.++.++|+++++++++++........+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~ 184 (282)
T 3fcx_A 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWG 184 (282)
T ss_dssp TTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHHH
T ss_pred cccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCchh
Confidence 0100 01123445666665 4443 68999999999999999999999999999988654422111000
Q ss_pred hhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC
Q 021229 160 DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI 239 (315)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 239 (315)
...+...+... . ..+...+. . . ....+..+
T Consensus 185 ------------------------~~~~~~~~~~~-~----~~~~~~~~---------~---~---------~~~~~~~~ 214 (282)
T 3fcx_A 185 ------------------------KKAFSGYLGTD-Q----SKWKAYDA---------T---H---------LVKSYPGS 214 (282)
T ss_dssp ------------------------HHHHHHHHC--------CCGGGGCH---------H---H---------HHTTCC--
T ss_pred ------------------------HHHHHHhcCCc-h----hhhhhcCH---------H---H---------HHHhcccC
Confidence 00000011100 0 00000000 0 0 11234456
Q ss_pred CCCeEEEEeCCCCCCchHH------HHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 240 TQPTLILWGEHDQIFPLEL------GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~------~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++|+++++|++|.++|... .+.+.+. +.++++++++++||.... ...+.....+|+.+
T Consensus 215 ~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~ 278 (282)
T 3fcx_A 215 QLDILIDQGKDDQFLLDGQLLPDNFIAACTEK-KIPVVFRLQEDYDHSYYF--IATFITDHIRHHAK 278 (282)
T ss_dssp -CCEEEEEETTCHHHHTTSSCHHHHHHHHHHT-TCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCcccccchhhHHHHHHHHHHc-CCceEEEECCCCCcCHHH--HHhhhHHHHHHHHH
Confidence 8999999999999986543 4444443 256899999999997643 23344444455443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-18 Score=165.33 Aligned_cols=229 Identities=13% Similarity=0.048 Sum_probs=132.7
Q ss_pred eecCCCceEEEEEecCC--CCCCCcEEEEccCCCChh-hhHHhhHhhc-cccceEEeecCCCCCCCCCC---CCCCC-ch
Q 021229 29 TDLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGANAL-WQWTNIIPHM-IHYFNVYVPDLLFFGDSFTT---RPERS-ES 100 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~-~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~---~~~~~-~~ 100 (315)
+...||..++++...+. +++.|+||++||.+.+.. ..|......| ..+|.|+++|+||+|.+... ..... ..
T Consensus 466 ~~~~dg~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~ 545 (741)
T 1yr2_A 466 YPSKDGTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDKKQ 545 (741)
T ss_dssp EECTTSCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGGTH
T ss_pred EEcCCCCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhcCC
Confidence 34457888888764332 346789999999765432 2344444444 45699999999999977311 00000 01
Q ss_pred hHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhh
Q 021229 101 FQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKI 174 (315)
Q Consensus 101 ~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
...+++.+.++.+ +.+++.++||||||.+++.++.++|++++++|+..+....... ...
T Consensus 546 ~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~------~~~--------- 610 (741)
T 1yr2_A 546 NVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRF------DQF--------- 610 (741)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSG------GGS---------
T ss_pred CcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccc------cCC---------
Confidence 1123333333333 3478999999999999999999999999999987654322110 000
Q ss_pred ccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccccc-CCC-CeEEEEeCCCC
Q 021229 175 LVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDK-ITQ-PTLILWGEHDQ 252 (315)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~-P~lvi~G~~D~ 252 (315)
+.......+ + ..+. . .+..+.+ . .......+.. +++ |+|+++|++|.
T Consensus 611 --~~~~~~~~~-----~-g~~~----~----~~~~~~~------------~---~~sp~~~~~~~~~~~P~Li~~G~~D~ 659 (741)
T 1yr2_A 611 --TAGRYWVDD-----Y-GYPE----K----EADWRVL------------R---RYSPYHNVRSGVDYPAILVTTADTDD 659 (741)
T ss_dssp --TTGGGGHHH-----H-CCTT----S----HHHHHHH------------H---TTCGGGCCCTTSCCCEEEEEECSCCS
T ss_pred --CCCchhHHH-----c-CCCC----C----HHHHHHH------------H---HcCchhhhhccCCCCCEEEEeeCCCC
Confidence 000000000 1 1100 0 0100000 0 1112234555 775 99999999999
Q ss_pred CCchHHHHHHHhhcC------CCcEEEEEcCCCCccccCC--hHHHHHHHHHHHhcCCC
Q 021229 253 IFPLELGRRLKSHLG------DNAQLIVIKKAGHAFNYEK--PKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 253 ~~~~~~~~~l~~~~~------~~~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~~~~~ 303 (315)
.+|+..++++.+.+. ..+++++++++||....+. +.++.+.+.+||.+...
T Consensus 660 ~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 660 RVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp SSCTHHHHHHHHHHHHSCCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 999998888876652 2378999999999987643 35888999999986554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.3e-18 Score=163.06 Aligned_cols=229 Identities=15% Similarity=0.080 Sum_probs=138.5
Q ss_pred eecCCCceEEEEEecCC----CCCCCcEEEEccCCCChh-hhHHhhH-hhcc-ccceEEeecCCCCCCCCCC---C-CCC
Q 021229 29 TDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANAL-WQWTNII-PHMI-HYFNVYVPDLLFFGDSFTT---R-PER 97 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~-~~w~~~~-~~l~-~~~~vi~~D~~G~G~S~~~---~-~~~ 97 (315)
+...||..++++...+. +++.|+||++||.+.... +.|.... ..+. .+|.|+++|+||+|++... . ...
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 34457888887654322 345788999999765432 2243333 3445 6799999999999976321 0 001
Q ss_pred CchhHHHHHHHHHHHc------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 98 SESFQAECVMRVMEAH------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
......+++.+.++.+ +.+++.++||||||.+++.++.++|++++++|+..+...+.... .. .
T Consensus 522 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~------~~-~---- 590 (710)
T 2xdw_A 522 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFH------KY-T---- 590 (710)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG------GS-T----
T ss_pred cCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhcc------cc-C----
Confidence 1111123333333333 34689999999999999999999999999999876544221100 00 0
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccc-----cCCC-CeEE
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNID-----KITQ-PTLI 245 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~i~~-P~lv 245 (315)
.......+ + ..+. . .+..+.+.. ......+. .+++ |+|+
T Consensus 591 ------~~~~~~~~-----~-g~~~----~----~~~~~~~~~---------------~sp~~~~~~~~~~~~~~pP~Li 635 (710)
T 2xdw_A 591 ------IGHAWTTD-----Y-GCSD----S----KQHFEWLIK---------------YSPLHNVKLPEADDIQYPSMLL 635 (710)
T ss_dssp ------TGGGGHHH-----H-CCTT----S----HHHHHHHHH---------------HCGGGCCCCCSSTTCCCCEEEE
T ss_pred ------CChhHHHh-----C-CCCC----C----HHHHHHHHH---------------hCcHhhhcccccccCCCCcEEE
Confidence 00000000 1 1100 0 010010000 01122344 6787 9999
Q ss_pred EEeCCCCCCchHHHHHHHhhcC----------CCcEEEEEcCCCCccccC--ChHHHHHHHHHHHhcCCC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLG----------DNAQLIVIKKAGHAFNYE--KPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~----------~~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~~~ 303 (315)
++|++|..+|+..++++.+.+. ...++++++++||..... ++.++.+.+.+||.+...
T Consensus 636 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 636 LTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp EEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999988888876551 235899999999998764 346888899999976543
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=142.22 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=123.2
Q ss_pred CCCceEEEEEecCC----CCCCCcEEEEccCCCChhhhHHh---hHhhccc-cceEEeecCCCCCCCCCCCC--------
Q 021229 32 QDGSVMHCWVPKTR----NDSKPDLVLIHGLGANALWQWTN---IIPHMIH-YFNVYVPDLLFFGDSFTTRP-------- 95 (315)
Q Consensus 32 ~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~~~w~~---~~~~l~~-~~~vi~~D~~G~G~S~~~~~-------- 95 (315)
..|..+.++...+. ++..|+||++||++.+.. .|.. ....+.+ .+.|+++|.+++|.+.....
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~ 102 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDE-NFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGA 102 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSH-HHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTC
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChh-hhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCC
Confidence 35655555443222 334578999999988775 4654 2333332 59999999987776532110
Q ss_pred -------C-------CCchhHHHHHHHHHHHc-CC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh
Q 021229 96 -------E-------RSESFQAECVMRVMEAH-SV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR 159 (315)
Q Consensus 96 -------~-------~~~~~~a~~~~~~l~~l-~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~ 159 (315)
. ....+..+++..++++. .. ++++|+||||||.+|+.++.++|+++++++++++..........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~ 182 (280)
T 3ls2_A 103 GFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCPWG 182 (280)
T ss_dssp CTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSHHH
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCcch
Confidence 0 00122344555666554 33 78999999999999999999999999999988764432111000
Q ss_pred hhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccc-c
Q 021229 160 DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNID-K 238 (315)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 238 (315)
...+...+... . ..+...+.. .... .+. .
T Consensus 183 ------------------------~~~~~~~~g~~-~----~~~~~~~~~------------~~~~---------~~~~~ 212 (280)
T 3ls2_A 183 ------------------------VKAFTGYLGAD-K----TTWAQYDSC------------KLMA---------KAEQS 212 (280)
T ss_dssp ------------------------HHHHHHHHCSC-G----GGTGGGCHH------------HHHH---------TCCGG
T ss_pred ------------------------hhHHHhhcCch-H----HHHHhcCHH------------HHHH---------hcccc
Confidence 00000011100 0 000000000 0000 011 1
Q ss_pred CCCCeEEEEeCCCCCCchH-----HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 239 ITQPTLILWGEHDQIFPLE-----LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~-----~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
..+|+++++|++|.+++.+ ..+.+.+. +.+++++++++++|.... ...+...+.+|+.+
T Consensus 213 ~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~~~~ 276 (280)
T 3ls2_A 213 NYLPMLVSQGDADNFLDEQLKPQNLVAVAKQK-DYPLTLEMQTGYDHSYFF--ISSFIDQHLVFHHQ 276 (280)
T ss_dssp GCCCEEEEEETTCTTCCCCCCHHHHHHHHHHH-TCCEEEEEETTCCSSHHH--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCcccCCchhHHHHHHHHHHh-CCCceEEEeCCCCCchhh--HHHHHHHHHHHHHH
Confidence 3679999999999999862 34444443 356899999999997653 23344445566554
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-17 Score=140.65 Aligned_cols=118 Identities=15% Similarity=0.145 Sum_probs=80.0
Q ss_pred CCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhH-HhhHhhccc-cceEEeecCC------------CC--CCCCCC
Q 021229 32 QDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQW-TNIIPHMIH-YFNVYVPDLL------------FF--GDSFTT 93 (315)
Q Consensus 32 ~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w-~~~~~~l~~-~~~vi~~D~~------------G~--G~S~~~ 93 (315)
.+|..+.++...+. .+..|+||++||++.+.. .| ..+.+.+.+ +|.|+++|++ |+ |.|...
T Consensus 35 ~~~~~l~~~~~~P~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~s~~~ 113 (304)
T 3d0k_A 35 NADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGA-DYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNP 113 (304)
T ss_dssp CTTCCEEEEEEECTTCCTTSCEEEEECCTTCCHH-HHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCTTSCB
T ss_pred CCCceEEEEEEeCCCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccccCCC
Confidence 45666676643222 245689999999998875 46 666676654 5999999999 66 666432
Q ss_pred CC--CCCchhHHHHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhh-hhceeEEeeCCC
Q 021229 94 RP--ERSESFQAECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKE-KIEKVVICCSGV 151 (315)
Q Consensus 94 ~~--~~~~~~~a~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~-~v~~lil~~~~~ 151 (315)
.+ ...... ...+.+.+... +.++++|+||||||.+++.++.++|+ +++++|+.+++.
T Consensus 114 ~~~~~~~~~~-~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~ 176 (304)
T 3d0k_A 114 RHVDGWTYAL-VARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGW 176 (304)
T ss_dssp CCGGGSTTHH-HHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSS
T ss_pred CcccchHHHH-HHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcc
Confidence 11 111122 33334444432 35789999999999999999999995 788888776443
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=140.15 Aligned_cols=214 Identities=16% Similarity=0.129 Sum_probs=121.8
Q ss_pred CCceEEEEEecC-C--CCCCCcEEEEccCCCChhhhHHh---hHhhcc-ccceEEeecCCCCC--------------CCC
Q 021229 33 DGSVMHCWVPKT-R--NDSKPDLVLIHGLGANALWQWTN---IIPHMI-HYFNVYVPDLLFFG--------------DSF 91 (315)
Q Consensus 33 ~g~~~~~~~~~~-~--~~~~~~vvllHG~~~~~~~~w~~---~~~~l~-~~~~vi~~D~~G~G--------------~S~ 91 (315)
.|..+.++...+ + ++..|+||++||++.+.. .|.. +...+. ..+.|+++|.+++| .|.
T Consensus 32 ~~~~~~~~v~~P~~~~~~~~p~vv~lHG~~~~~~-~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~ 110 (283)
T 4b6g_A 32 LQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQ-NFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGF 110 (283)
T ss_dssp TTEEEEEEEEECCCTTCCCEEEEEEECCTTCCSH-HHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCT
T ss_pred hCCceEEEEEeCCCCCCCCCCEEEEEcCCCCCcc-chhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcc
Confidence 455555443322 2 344678999999988765 4643 223333 35999999987443 331
Q ss_pred CC-CCCC------C-chhHHHHHHHHHHHc--CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh
Q 021229 92 TT-RPER------S-ESFQAECVMRVMEAH--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR 161 (315)
Q Consensus 92 ~~-~~~~------~-~~~~a~~~~~~l~~l--~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 161 (315)
.. .+.. . ..+.++++..+++.. ..++++|+||||||.+|+.++.++|+++++++++++..........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~-- 188 (283)
T 4b6g_A 111 YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPWG-- 188 (283)
T ss_dssp TSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSHHH--
T ss_pred cccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCcch--
Confidence 11 0000 1 223345666777665 3478999999999999999999999999999988764432111000
Q ss_pred hhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC
Q 021229 162 MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ 241 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 241 (315)
...+...+... . ..+...+.. .... .+ ....
T Consensus 189 ----------------------~~~~~~~~g~~-~----~~~~~~~~~------------~~~~---------~~-~~~~ 219 (283)
T 4b6g_A 189 ----------------------EKAFTAYLGKD-R----EKWQQYDAN------------SLIQ---------QG-YKVQ 219 (283)
T ss_dssp ----------------------HHHHHHHHCSC-G----GGGGGGCHH------------HHHH---------HT-CCCS
T ss_pred ----------------------hhhHHhhcCCc-h----HHHHhcCHH------------HHHH---------hc-ccCC
Confidence 00000011100 0 000000000 0000 01 1346
Q ss_pred CeEEEEeCCCCCCchH-----HHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 242 PTLILWGEHDQIFPLE-----LGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 242 P~lvi~G~~D~~~~~~-----~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+++++|++|.+++.. ..+.+.+. +.++++.++++++|.... .+.+...+.+|+.+.
T Consensus 220 p~li~~G~~D~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~~~~--~~~~l~~~l~~~~~~ 281 (283)
T 4b6g_A 220 GMRIDQGLEDEFLPTQLRTEDFIETCRAA-NQPVDVRFHKGYDHSYYF--IASFIGEHIAYHAAF 281 (283)
T ss_dssp CCEEEEETTCTTHHHHTCHHHHHHHHHHH-TCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHTT
T ss_pred CEEEEecCCCccCcchhhHHHHHHHHHHc-CCCceEEEeCCCCcCHhH--HHHHHHHHHHHHHHh
Confidence 9999999999999862 23333333 356899999999997643 344556666777654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-17 Score=143.13 Aligned_cols=190 Identities=18% Similarity=0.266 Sum_probs=122.0
Q ss_pred eeecC-CCceEEEEEecCCC----CCCCcEEEEccCCCChhh-hHHhh----Hhh-------ccccceEEeecCCCCCCC
Q 021229 28 VTDLQ-DGSVMHCWVPKTRN----DSKPDLVLIHGLGANALW-QWTNI----IPH-------MIHYFNVYVPDLLFFGDS 90 (315)
Q Consensus 28 ~~~~~-~g~~~~~~~~~~~~----~~~~~vvllHG~~~~~~~-~w~~~----~~~-------l~~~~~vi~~D~~G~G~S 90 (315)
..... +|..++++...+.+ ++.|.||++||++.+... .+..+ ... ....+.|+++|.+|.+..
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 34445 77778877543322 234789999998755321 01100 011 122368999999976543
Q ss_pred CCCCC--------CCCchhHHHHHHHHHHHcCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhh
Q 021229 91 FTTRP--------ERSESFQAECVMRVMEAHSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160 (315)
Q Consensus 91 ~~~~~--------~~~~~~~a~~~~~~l~~l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 160 (315)
..... ........+.+..+++..+++ ++.|+||||||.+++.++.++|+++++++++++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~-------- 299 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD-------- 299 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC--------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCC--------
Confidence 21100 111122344555566666654 799999999999999999999999999988754320
Q ss_pred hhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC-
Q 021229 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI- 239 (315)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i- 239 (315)
+ ..+..+
T Consensus 300 ----------------------------------------~--------------------------------~~~~~~~ 307 (380)
T 3doh_A 300 ----------------------------------------V--------------------------------SKVERIK 307 (380)
T ss_dssp ----------------------------------------G--------------------------------GGGGGGT
T ss_pred ----------------------------------------h--------------------------------hhhhhcc
Confidence 0 001122
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCC--------CCccccCChHHHHH--HHHHHHhcC
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKA--------GHAFNYEKPKEFYK--HLKSFLLDS 301 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~--------gH~~~~e~p~~~~~--~i~~fl~~~ 301 (315)
++|+|+++|++|.++|.+.++.+.+.+. .+.++++++++ ||... ..... .+.+||.+.
T Consensus 308 ~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~----~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 308 DIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSW----IPTYENQEAIEWLFEQ 378 (380)
T ss_dssp TSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTH----HHHHTCHHHHHHHHTC
T ss_pred CCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhH----HHhcCCHHHHHHHHhh
Confidence 3799999999999999988888876652 35789999999 67532 22233 788898754
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-18 Score=144.89 Aligned_cols=177 Identities=21% Similarity=0.300 Sum_probs=117.0
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccc---cceEEeecCC------CCCCCCCCC---CCCCch-------hHHHHHH
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIH---YFNVYVPDLL------FFGDSFTTR---PERSES-------FQAECVM 107 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~---~~~vi~~D~~------G~G~S~~~~---~~~~~~-------~~a~~~~ 107 (315)
+..|.||||||+|.+.. .|..+.+.|.. .+.+++++-| |.|.+-... ...... ...+++.
T Consensus 64 ~~~plVI~LHG~G~~~~-~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~~~~~~~~~~l~ 142 (285)
T 4fhz_A 64 EATSLVVFLHGYGADGA-DLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAAEGMAAAARDLD 142 (285)
T ss_dssp CCSEEEEEECCTTBCHH-HHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHH-HHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhhHHHHHHHHHHH
Confidence 34567899999999885 58877777764 3678887754 444331100 000000 1122333
Q ss_pred HHH----HHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 108 RVM----EAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 108 ~~l----~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
+++ +..++ ++++|+|+|+||.+++.++.++|+++.++|.+++.....
T Consensus 143 ~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~--------------------------- 195 (285)
T 4fhz_A 143 AFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAP--------------------------- 195 (285)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCH---------------------------
T ss_pred HHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCc---------------------------
Confidence 333 34444 689999999999999999999999999998765422100
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
+... .....+.|++++||++|+++|.+.++.
T Consensus 196 -------------------------~~~~------------------------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~ 226 (285)
T 4fhz_A 196 -------------------------ERLA------------------------EEARSKPPVLLVHGDADPVVPFADMSL 226 (285)
T ss_dssp -------------------------HHHH------------------------HHCCCCCCEEEEEETTCSSSCTHHHHH
T ss_pred -------------------------hhhh------------------------hhhhhcCcccceeeCCCCCcCHHHHHH
Confidence 0000 001235799999999999999998887
Q ss_pred HHhhc---CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCC
Q 021229 262 LKSHL---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304 (315)
Q Consensus 262 l~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 304 (315)
+.+.+ +.+.+++++++.||.+. +++ .+.+.+||++..+.
T Consensus 227 ~~~~L~~~g~~~~~~~y~g~gH~i~---~~~-l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 227 AGEALAEAGFTTYGHVMKGTGHGIA---PDG-LSVALAFLKERLPD 268 (285)
T ss_dssp HHHHHHHTTCCEEEEEETTCCSSCC---HHH-HHHHHHHHHHHCC-
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCC---HHH-HHHHHHHHHHHCcC
Confidence 77654 24578999999999874 444 46688899876543
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-16 Score=137.86 Aligned_cols=218 Identities=12% Similarity=0.096 Sum_probs=120.4
Q ss_pred CCCcEEEEccCCC---Ch-hhhHHhhHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH-------cC
Q 021229 48 SKPDLVLIHGLGA---NA-LWQWTNIIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA-------HS 114 (315)
Q Consensus 48 ~~~~vvllHG~~~---~~-~~~w~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~-------l~ 114 (315)
..|.||++||.|. +. ...|..+...|+. +|.|+++|+|+.++... + .... .+....+++.. .+
T Consensus 111 ~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~--~-~~~~-D~~~a~~~l~~~~~~~~~~d 186 (365)
T 3ebl_A 111 PFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRY--P-CAYD-DGWTALKWVMSQPFMRSGGD 186 (365)
T ss_dssp CCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT--T-HHHH-HHHHHHHHHHHCTTTEETTT
T ss_pred cceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCC--c-HHHH-HHHHHHHHHHhCchhhhCCC
Confidence 4578999999653 22 1236677777754 69999999997653321 1 1111 12223333332 22
Q ss_pred CC-ceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhh
Q 021229 115 VK-KLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT 190 (315)
Q Consensus 115 ~~-~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
.+ ++.|+||||||.+|+.++.+.++ +++++|++++............ ..... ..........+.. .
T Consensus 187 ~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~-~ 256 (365)
T 3ebl_A 187 AQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESER--------RLDGK-YFVTLQDRDWYWK-A 256 (365)
T ss_dssp TEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHH--------HHTTT-SSCCHHHHHHHHH-H
T ss_pred CCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhh--------hcCCC-cccCHHHHHHHHH-H
Confidence 44 89999999999999999999988 7999999876553321110000 00000 0000000111110 1
Q ss_pred hccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCC-CCeEEEEeCCCCCCch--HHHHHHHhhcC
Q 021229 191 FFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT-QPTLILWGEHDQIFPL--ELGRRLKSHLG 267 (315)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P~lvi~G~~D~~~~~--~~~~~l~~~~~ 267 (315)
+...... ... .... ........+..+. .|+|+++|++|.+++. ...+.+.+. +
T Consensus 257 ~~~~~~~-~~~--------------------~~~~--p~~~~~~~l~~~~~pP~Li~~G~~D~l~~~~~~~~~~L~~~-g 312 (365)
T 3ebl_A 257 YLPEDAD-RDH--------------------PACN--PFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALRED-G 312 (365)
T ss_dssp HSCTTCC-TTS--------------------TTTC--TTSTTCCCCTTSCCCCEEEEEETTSTTHHHHHHHHHHHHHT-T
T ss_pred hCCCCCC-CCC--------------------cccC--CCCCcchhhccCCCCCEEEEEcCcccchhHHHHHHHHHHHC-C
Confidence 1000000 000 0000 0000111223223 4899999999987754 234444333 2
Q ss_pred CCcEEEEEcCCCCccc----cCChHHHHHHHHHHHhcCCC
Q 021229 268 DNAQLIVIKKAGHAFN----YEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 268 ~~~~~~~i~~~gH~~~----~e~p~~~~~~i~~fl~~~~~ 303 (315)
..++++++++++|.++ .++.+++.+.|.+||++...
T Consensus 313 ~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 313 HHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp CCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 5689999999999776 45667999999999986543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=158.22 Aligned_cols=232 Identities=14% Similarity=0.108 Sum_probs=132.4
Q ss_pred eecCCCceEEEEEecCC----CCCCCcEEEEccCCCCh-hhhHHhhHhhc-cccceEEeecCCCCCCCCCC---CC-CCC
Q 021229 29 TDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANA-LWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTT---RP-ERS 98 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~-~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~---~~-~~~ 98 (315)
+...+|..++++...+. +++.|+||++||..... ...|......| ..+|.|+++|+||+|..... .. ...
T Consensus 430 ~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 509 (693)
T 3iuj_A 430 YQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAGTQQN 509 (693)
T ss_dssp EECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred EecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhhhhhc
Confidence 34457887877654322 34578999999964432 22344434333 45699999999998866311 00 001
Q ss_pred chhHHHHHHHHHH---HcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhh
Q 021229 99 ESFQAECVMRVME---AHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEAS 172 (315)
Q Consensus 99 ~~~~a~~~~~~l~---~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (315)
.....+++.+.++ ..+ .+++.++|||+||.+++.++.++|++++++|+..+...+.... . ....
T Consensus 510 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~---~-~~~~------ 579 (693)
T 3iuj_A 510 KQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH---T-FTAG------ 579 (693)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG---G-SGGG------
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc---c-CCCc------
Confidence 1111223333332 333 3689999999999999999999999999998876544321100 0 0000
Q ss_pred hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccccccccc-CCCC-eEEEEeCC
Q 021229 173 KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDK-ITQP-TLILWGEH 250 (315)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P-~lvi~G~~ 250 (315)
..... .+ ..+. .+. +..+.+.. ......+.. +++| +|+++|++
T Consensus 580 -------~~~~~-----~~-g~p~---~~~----~~~~~~~~---------------~sp~~~~~~~~~~Pp~Li~~G~~ 624 (693)
T 3iuj_A 580 -------TGWAY-----DY-GTSA---DSE----AMFDYLKG---------------YSPLHNVRPGVSYPSTMVTTADH 624 (693)
T ss_dssp -------GGCHH-----HH-CCTT---SCH----HHHHHHHH---------------HCHHHHCCTTCCCCEEEEEEESS
T ss_pred -------hhHHH-----Hc-CCcc---CHH----HHHHHHHh---------------cCHHHhhcccCCCCceeEEecCC
Confidence 00000 01 1110 011 10010100 011223455 7888 99999999
Q ss_pred CCCCchHHHHHHHhhcC------CCcEEEEEcCCCCcccc--CChHHHHHHHHHHHhcCCCCC
Q 021229 251 DQIFPLELGRRLKSHLG------DNAQLIVIKKAGHAFNY--EKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~------~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~~~~~~ 305 (315)
|..||+..++++++.+. ...++++++++||.... ++..+..+.+.+||.+.....
T Consensus 625 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 625 DDRVVPAHSFKFAATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp CSSSCTHHHHHHHHHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCCChhHHHHHHHHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999988888876652 23589999999998865 456788889999998766543
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=148.64 Aligned_cols=91 Identities=18% Similarity=0.091 Sum_probs=63.1
Q ss_pred CCCCcEEEEccCCCChhh----------hHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCC--------chhHHHHHH
Q 021229 47 DSKPDLVLIHGLGANALW----------QWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERS--------ESFQAECVM 107 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~----------~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~--------~~~~a~~~~ 107 (315)
+..|.||++||++++... .|..++..|. .+|+|+++|+||||.|........ ....+..+.
T Consensus 77 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~ 156 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYLHSASEASATIDAMRAAR 156 (397)
T ss_dssp SCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHH
Confidence 345778889998876431 1445566664 569999999999999864322221 112244456
Q ss_pred HHHHHcCC---CceEEEEEchhHHHHHHHHHhh
Q 021229 108 RVMEAHSV---KKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 108 ~~l~~l~~---~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.+++.+++ ++++|+||||||.+++.++...
T Consensus 157 ~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~ 189 (397)
T 3h2g_A 157 SVLQHLKTPLSGKVMLSGYSQGGHTAMATQREI 189 (397)
T ss_dssp HHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHh
Confidence 66777776 7899999999999999887443
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=153.29 Aligned_cols=210 Identities=17% Similarity=0.162 Sum_probs=117.8
Q ss_pred cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC--------------------CCceEEEEEchhHHHHHHH
Q 021229 74 IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS--------------------VKKLSLVGLSYGGFVGYSM 133 (315)
Q Consensus 74 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~--------------------~~~v~lvGhSmGG~ia~~~ 133 (315)
.++|.|+++|+||+|.|......... ..++++.++++.+. ..+|.++||||||.+++.+
T Consensus 279 ~~GYaVv~~D~RG~G~S~G~~~~~~~-~e~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~ 357 (763)
T 1lns_A 279 TRGFASIYVAGVGTRSSDGFQTSGDY-QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGA 357 (763)
T ss_dssp TTTCEEEEECCTTSTTSCSCCCTTSH-HHHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHH
T ss_pred HCCCEEEEECCCcCCCCCCcCCCCCH-HHHHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHH
Confidence 45699999999999999754322222 34666777777665 2489999999999999999
Q ss_pred HHhhhhhhceeEEeeCCCccCchhhhhh-hhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHH
Q 021229 134 AAQFKEKIEKVVICCSGVCLEEQDLRDR-MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212 (315)
Q Consensus 134 a~~~p~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (315)
|..+|+.++++|..++...... ..... ..... .. .+... ...+....+... +.+... ... ...
T Consensus 358 Aa~~p~~lkaiV~~~~~~d~~~-~~~~~g~~~~~------~g-~~~~~--~~~l~~~~~~~~----~~~g~~-~~~-~~~ 421 (763)
T 1lns_A 358 ATTGVEGLELILAEAGISSWYN-YYRENGLVRSP------GG-FPGED--LDVLAALTYSRN----LDGADF-LKG-NAE 421 (763)
T ss_dssp HTTTCTTEEEEEEESCCSBHHH-HHBSSSSBCCC------TT-CTTCC--HHHHHHHHCGGG----GSHHHH-HHH-HHH
T ss_pred HHhCCcccEEEEEecccccHHH-Hhhhcchhhhc------cc-CCchh--hhHHhHHHHhhh----cCcchh-hhH-HHH
Confidence 9999999999998765432110 00000 00000 00 00000 000000000000 000000 000 000
Q ss_pred HHHHHHHHHHhh-hcc-------CccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCC-CcEEEEEcCCCCccc
Q 021229 213 CTEYLEEKRELV-RAI-------PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD-NAQLIVIKKAGHAFN 283 (315)
Q Consensus 213 ~~~~~~~~~~~~-~~~-------~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~-~~~~~~i~~~gH~~~ 283 (315)
............ ... ........+.+|++|+|+|+|..|..+|+..+..+.+.+.. .....+++++||..+
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~~~~~~l~i~~~gH~~~ 501 (763)
T 1lns_A 422 YEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYM 501 (763)
T ss_dssp HHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTTCCEEEEEESCSSCCC
T ss_pred HHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhccCCCeEEEEeCCcccCc
Confidence 000000000000 000 01112346778999999999999999999999999988842 123445678899987
Q ss_pred cC-ChHHHHHHHHHHHhc
Q 021229 284 YE-KPKEFYKHLKSFLLD 300 (315)
Q Consensus 284 ~e-~p~~~~~~i~~fl~~ 300 (315)
.+ .+..+.+.+.+|+.+
T Consensus 502 ~~~~~~~~~~~i~~Ffd~ 519 (763)
T 1lns_A 502 NSWQSIDFSETINAYFVA 519 (763)
T ss_dssp TTBSSCCHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHH
Confidence 65 556677888888753
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=133.57 Aligned_cols=190 Identities=16% Similarity=0.232 Sum_probs=122.4
Q ss_pred eEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc---cceEEeecCCC--------------CCCCCCC--CCC
Q 021229 36 VMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH---YFNVYVPDLLF--------------FGDSFTT--RPE 96 (315)
Q Consensus 36 ~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~---~~~vi~~D~~G--------------~G~S~~~--~~~ 96 (315)
.++|....+.++.+.+|||+||+|++.. .|..+.+.+.. .+++++|+-|- +...... ...
T Consensus 24 ~l~y~ii~P~~~~~~~VI~LHG~G~~~~-dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~ 102 (246)
T 4f21_A 24 AMNYELMEPAKQARFCVIWLHGLGADGH-DFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLN 102 (246)
T ss_dssp CCCEEEECCSSCCCEEEEEEEC--CCCC-CGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGG
T ss_pred CcCceEeCCCCcCCeEEEEEcCCCCCHH-HHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchh
Confidence 4555554444556779999999999885 58888877753 47888887542 1111100 000
Q ss_pred -----CCchhHHHHHHHHHHH---c--CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhccc
Q 021229 97 -----RSESFQAECVMRVMEA---H--SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 97 -----~~~~~~a~~~~~~l~~---l--~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
.......+.+..+++. . ..++++|+|+|+||++++.++.++|+++.+++.+++.......
T Consensus 103 ~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~---------- 172 (246)
T 4f21_A 103 RVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDN---------- 172 (246)
T ss_dssp GGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHH----------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccc----------
Confidence 0111223344444432 2 3468999999999999999999999999999887653311000
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
+.... . -..-++|++++
T Consensus 173 ------------------------~~~~~-----~----------------------------------~~~~~~Pvl~~ 189 (246)
T 4f21_A 173 ------------------------FKGKI-----T----------------------------------SINKGLPILVC 189 (246)
T ss_dssp ------------------------HSTTC-----C----------------------------------GGGTTCCEEEE
T ss_pred ------------------------ccccc-----c----------------------------------ccccCCchhhc
Confidence 00000 0 01125799999
Q ss_pred EeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 247 WGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
||++|+++|.+.++.+.+.+. -+.++..+++.||.+. ++++ +.+.+||++.+.
T Consensus 190 HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~---~~~l-~~~~~fL~k~l~ 245 (246)
T 4f21_A 190 HGTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVC---MEEI-KDISNFIAKTFK 245 (246)
T ss_dssp EETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCC---HHHH-HHHHHHHHHHTT
T ss_pred ccCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccC---HHHH-HHHHHHHHHHhC
Confidence 999999999998888776652 3468899999999874 4444 678899987653
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-18 Score=153.85 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcccc-c---eEEeecCCCCCCC-----CCCC----------------------
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHY-F---NVYVPDLLFFGDS-----FTTR---------------------- 94 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~---~vi~~D~~G~G~S-----~~~~---------------------- 94 (315)
.+++++|||+||++++.. .|..+++.|.+. | +|+++|++|||.| +...
T Consensus 19 ~~~~ppVVLlHG~g~s~~-~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~ 97 (484)
T 2zyr_A 19 AEDFRPVVFVHGLAGSAG-QFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDK 97 (484)
T ss_dssp --CCCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHH
T ss_pred CCCCCEEEEECCCCCCHH-HHHHHHHHHHHcCCCcceEEEEECCCCCccccccccccccccccccccccccccccccccc
Confidence 445789999999999886 699999999865 8 8999999999976 1000
Q ss_pred ---------CCCCchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh---hhhceeEEeeCCC
Q 021229 95 ---------PERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK---EKIEKVVICCSGV 151 (315)
Q Consensus 95 ---------~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p---~~v~~lil~~~~~ 151 (315)
........++++.+++++++.++++|+||||||++++.++.++| ++|+++|+++++.
T Consensus 98 v~~~~~~~~~~~~~~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 98 ILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVW 166 (484)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCC
T ss_pred cccccccCchhhhHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCcc
Confidence 00112233556777788889999999999999999999999998 4899999987543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.8e-17 Score=158.76 Aligned_cols=233 Identities=15% Similarity=0.071 Sum_probs=135.3
Q ss_pred eecCCCceEEEEEecC-C---CCCCCcEEEEccCCCChh-hhHHhhHhhcc-ccceEEeecCCCCCCCCCC----CCC--
Q 021229 29 TDLQDGSVMHCWVPKT-R---NDSKPDLVLIHGLGANAL-WQWTNIIPHMI-HYFNVYVPDLLFFGDSFTT----RPE-- 96 (315)
Q Consensus 29 ~~~~~g~~~~~~~~~~-~---~~~~~~vvllHG~~~~~~-~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~----~~~-- 96 (315)
+...||..++++...+ + +++.|+||++||.+.... ..|......|. .+|.|+++|+||+|.+... ...
T Consensus 485 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~ 564 (751)
T 2xe4_A 485 ATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYL 564 (751)
T ss_dssp EECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGG
T ss_pred EECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhcccccc
Confidence 3445888888765322 2 245688999999755432 13555555554 4699999999999876321 110
Q ss_pred ---CCchhHHHHHHHHHHH--cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhh
Q 021229 97 ---RSESFQAECVMRVMEA--HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEA 171 (315)
Q Consensus 97 ---~~~~~~a~~~~~~l~~--l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (315)
....+....+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+.++...+.. ....
T Consensus 565 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~-----~~~~------- 632 (751)
T 2xe4_A 565 TKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMT-----TMCD------- 632 (751)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHH-----HHTC-------
T ss_pred ccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHh-----hhcc-------
Confidence 0111122223333332 1347899999999999999999999999999988765432110 0000
Q ss_pred hhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC-eEEEEeCC
Q 021229 172 SKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP-TLILWGEH 250 (315)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~ 250 (315)
...+...... ..+.. +. ..+..+.+. .......+.++++| +|+++|++
T Consensus 633 -----~~~~~~~~~~---~~~g~------p~--~~~~~~~~~---------------~~sp~~~~~~~~~Pp~Lii~G~~ 681 (751)
T 2xe4_A 633 -----PSIPLTTGEW---EEWGN------PN--EYKYYDYML---------------SYSPMDNVRAQEYPNIMVQCGLH 681 (751)
T ss_dssp -----TTSTTHHHHT---TTTCC------TT--SHHHHHHHH---------------HHCTGGGCCSSCCCEEEEEEETT
T ss_pred -----cCcccchhhH---HHcCC------CC--CHHHHHHHH---------------hcChhhhhccCCCCceeEEeeCC
Confidence 0000000000 00011 10 011101000 00122345678897 99999999
Q ss_pred CCCCchHHHHHHHhhcC---CCc---EEEEEcCCCCccccCChH--HHHHHHHHHHhcCCCC
Q 021229 251 DQIFPLELGRRLKSHLG---DNA---QLIVIKKAGHAFNYEKPK--EFYKHLKSFLLDSQPS 304 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~---~~~---~~~~i~~~gH~~~~e~p~--~~~~~i~~fl~~~~~~ 304 (315)
|..+|+..++++.+.+. ... .+.+++++||....+.++ +....+.+||.+....
T Consensus 682 D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 682 DPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp CSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 99999998888876652 112 344459999998876554 3445788999876543
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=125.07 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=79.1
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
.++++ +|..++|+... ++++|||+| .+.. .|..+ +.+.|+|+++|+||||.|...... ....++++
T Consensus 5 ~~~~~-~g~~~~~~~~g----~~~~vv~~H---~~~~-~~~~~---l~~~~~v~~~d~~G~G~s~~~~~~--~~~~~~~~ 70 (131)
T 2dst_A 5 GYLHL-YGLNLVFDRVG----KGPPVLLVA---EEAS-RWPEA---LPEGYAFYLLDLPGYGRTEGPRMA--PEELAHFV 70 (131)
T ss_dssp EEEEE-TTEEEEEEEEC----CSSEEEEES---SSGG-GCCSC---CCTTSEEEEECCTTSTTCCCCCCC--HHHHHHHH
T ss_pred EEEEE-CCEEEEEEEcC----CCCeEEEEc---CCHH-HHHHH---HhCCcEEEEECCCCCCCCCCCCCC--HHHHHHHH
Confidence 34444 67788887652 367899999 3332 47766 777799999999999999754333 56678899
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
.++++.++.++++|+||||||.+++.+|.++|.
T Consensus 71 ~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 71 AGFAVMMNLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHTTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHcCCCccEEEEEChHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999884
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-16 Score=147.55 Aligned_cols=236 Identities=14% Similarity=0.098 Sum_probs=139.0
Q ss_pred hcceeee--eeecCCCceEEEEEecCC----CCCCCcEEEEccCCCCh-hhhHHhhH--hhccccceEEeecCCCCCCCC
Q 021229 21 RLGFRSS--VTDLQDGSVMHCWVPKTR----NDSKPDLVLIHGLGANA-LWQWTNII--PHMIHYFNVYVPDLLFFGDSF 91 (315)
Q Consensus 21 ~~~~~~~--~~~~~~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~-~~~w~~~~--~~l~~~~~vi~~D~~G~G~S~ 91 (315)
..++... .+...||..++++...+. +++.|.||++||.+... ...|.... ..+..+|.|+++|+||+|.+.
T Consensus 444 ~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G 523 (711)
T 4hvt_A 444 SENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFG 523 (711)
T ss_dssp GGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTC
T ss_pred cccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcc
Confidence 3444333 344468888887754332 34578999999964432 11233222 334567999999999988763
Q ss_pred CC----CCCCCchhHHHHHHHHH---HHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh
Q 021229 92 TT----RPERSESFQAECVMRVM---EAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR 161 (315)
Q Consensus 92 ~~----~~~~~~~~~a~~~~~~l---~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 161 (315)
.. ..........+++.+.+ ...+ .+++.++|+|+||.+++.++.++|++++++|...+...+....
T Consensus 524 ~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~---- 599 (711)
T 4hvt_A 524 PEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYK---- 599 (711)
T ss_dssp HHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGG----
T ss_pred hhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhh----
Confidence 21 01111111122333333 3333 2689999999999999999999999999998775543321100
Q ss_pred hhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCC
Q 021229 162 MFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQ 241 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 241 (315)
... .......+ + ..+. .+ +..+.+. .......+.++++
T Consensus 600 --~~~-----------~~~~~~~~-----~-G~p~---~~-----~~~~~l~---------------~~SP~~~v~~i~~ 637 (711)
T 4hvt_A 600 --EFG-----------AGHSWVTE-----Y-GDPE---IP-----NDLLHIK---------------KYAPLENLSLTQK 637 (711)
T ss_dssp --GST-----------TGGGGHHH-----H-CCTT---SH-----HHHHHHH---------------HHCGGGSCCTTSC
T ss_pred --ccc-----------cchHHHHH-----h-CCCc---CH-----HHHHHHH---------------HcCHHHHHhhcCC
Confidence 000 00000000 1 1110 00 0000000 0012334566776
Q ss_pred --CeEEEEeCCCCCCchHHHHHHHhhc----CCCcEEEEEcCCCCccccCC--hHHHHHHHHHHHhcCC
Q 021229 242 --PTLILWGEHDQIFPLELGRRLKSHL----GDNAQLIVIKKAGHAFNYEK--PKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 242 --P~lvi~G~~D~~~~~~~~~~l~~~~----~~~~~~~~i~~~gH~~~~e~--p~~~~~~i~~fl~~~~ 302 (315)
|+|+++|++|..||+..++++.+.+ +...++++++++||...... ..+....+.+||.+..
T Consensus 638 ~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~L 706 (711)
T 4hvt_A 638 YPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANAL 706 (711)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999888887776 24579999999999875432 3455667788987643
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=142.88 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=81.2
Q ss_pred CCCCcEEEEccCCCChhhhHH-hhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEc
Q 021229 47 DSKPDLVLIHGLGANALWQWT-NIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLS 124 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~-~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhS 124 (315)
+.+++||||||++.+....|. .+.+.|.+ +|+|+++|+||||.++. .......++.+.++++..+.++++|||||
T Consensus 63 ~~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~~---~~~~~~la~~I~~l~~~~g~~~v~LVGHS 139 (316)
T 3icv_A 63 SVSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITTLYAGSGNNKLPVLTWS 139 (316)
T ss_dssp BCSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTTSCCEEEEEET
T ss_pred CCCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCcH---HHHHHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 356799999999998733687 88898876 59999999999997631 12233456667777788888999999999
Q ss_pred hhHHHHHHHHHhh---hhhhceeEEeeCCC
Q 021229 125 YGGFVGYSMAAQF---KEKIEKVVICCSGV 151 (315)
Q Consensus 125 mGG~ia~~~a~~~---p~~v~~lil~~~~~ 151 (315)
|||+++..++..+ |++|+++|+++++.
T Consensus 140 mGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 140 QGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp HHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 9999997777765 58999999997654
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-17 Score=146.09 Aligned_cols=174 Identities=18% Similarity=0.134 Sum_probs=114.4
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCC---------C---------Cc---------
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPE---------R---------SE--------- 99 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~---------~---------~~--------- 99 (315)
+.|.|||+||++++.. .|..+...|++. |.|+++|++|+|.|...... . ..
T Consensus 97 ~~P~Vv~~HG~~~~~~-~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 175 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRT-LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQ 175 (383)
T ss_dssp CEEEEEEECCTTCCTT-TTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCch-HHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHHH
Confidence 4578999999998875 588888888765 99999999999987421000 0 00
Q ss_pred -hhHHHHHHHHHHHc--------------------------CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 100 -SFQAECVMRVMEAH--------------------------SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 100 -~~~a~~~~~~l~~l--------------------------~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
...++++...++.+ +.+++.++||||||.+++.++.+.| +++++|++++...
T Consensus 176 ~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~~ 254 (383)
T 3d59_A 176 VRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWMF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCT
T ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCccC
Confidence 00123333333321 2458999999999999999987765 6898887754210
Q ss_pred cCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcccc
Q 021229 153 LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRK 232 (315)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (315)
. ...
T Consensus 255 p----------------------------------------------~~~------------------------------ 258 (383)
T 3d59_A 255 P----------------------------------------------LGD------------------------------ 258 (383)
T ss_dssp T----------------------------------------------CCG------------------------------
T ss_pred C----------------------------------------------Cch------------------------------
Confidence 0 000
Q ss_pred ccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc--CCCcEEEEEcCCCCccccC-------------------Ch----
Q 021229 233 ISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL--GDNAQLIVIKKAGHAFNYE-------------------KP---- 287 (315)
Q Consensus 233 ~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~--~~~~~~~~i~~~gH~~~~e-------------------~p---- 287 (315)
..+.++++|+|+++|++|..++ ..+.+.+.. ....+++++++++|..+.+ +|
T Consensus 259 -~~~~~i~~P~Lii~g~~D~~~~--~~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~ 335 (383)
T 3d59_A 259 -EVYSRIPQPLFFINSEYFQYPA--NIIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAI 335 (383)
T ss_dssp -GGGGSCCSCEEEEEETTTCCHH--HHHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHH
T ss_pred -hhhccCCCCEEEEecccccchh--hHHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHH
Confidence 0124577899999999998543 233343322 2457899999999987532 34
Q ss_pred HHHHHHHHHHHhcCC
Q 021229 288 KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 288 ~~~~~~i~~fl~~~~ 302 (315)
+.+++.+.+||++..
T Consensus 336 ~~~~~~~~~Fl~~~L 350 (383)
T 3d59_A 336 DLSNKASLAFLQKHL 350 (383)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 344567888887543
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-16 Score=132.31 Aligned_cols=180 Identities=18% Similarity=0.218 Sum_probs=111.4
Q ss_pred CCCCcEEEEccCCCChhhhHHhh-------Hhhccc-----cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH-Hc
Q 021229 47 DSKPDLVLIHGLGANALWQWTNI-------IPHMIH-----YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME-AH 113 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~-------~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~-~l 113 (315)
+..|.||++||++.+.. .|... .+.|.+ .+.|+++|.+++|.+..........+..+++..+++ ..
T Consensus 60 ~~~P~vv~lHG~g~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 138 (268)
T 1jjf_A 60 KKYSVLYLLHGIGGSEN-DWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLIPYIESNY 138 (268)
T ss_dssp SCBCEEEEECCTTCCTT-TTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTCSCHHHHHHHHHHHTHHHHHHHHS
T ss_pred CCccEEEEECCCCCCcc-hhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccccccHHHHHHHHHHHHHHHHHhhc
Confidence 35678999999987754 35443 455543 499999999988754211000001112344455554 33
Q ss_pred CC----CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHh
Q 021229 114 SV----KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRY 189 (315)
Q Consensus 114 ~~----~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (315)
+. +++.|+||||||.+++.++.++|+++++++++++....... ..
T Consensus 139 ~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~---------------------------~~---- 187 (268)
T 1jjf_A 139 SVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN---------------------------ER---- 187 (268)
T ss_dssp CBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH---------------------------HH----
T ss_pred CCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch---------------------------hh----
Confidence 43 68999999999999999999999999999888654321100 00
Q ss_pred hhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCC-eEEEEeCCCCCCchHHHHHHHhhc--
Q 021229 190 TFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQP-TLILWGEHDQIFPLELGRRLKSHL-- 266 (315)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~l~~~~-- 266 (315)
.+ .. .. .. ...+.| +++++|++|.++|. .+.+.+.+
T Consensus 188 ~~-~~-----~~----~~-----------------------------~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~ 226 (268)
T 1jjf_A 188 LF-PD-----GG----KA-----------------------------AREKLKLLFIACGTNDSLIGF--GQRVHEYCVA 226 (268)
T ss_dssp HC-TT-----TT----HH-----------------------------HHHHCSEEEEEEETTCTTHHH--HHHHHHHHHH
T ss_pred hc-Cc-----ch----hh-----------------------------hhhcCceEEEEecCCCCCccH--HHHHHHHHHH
Confidence 00 00 00 00 011244 99999999999874 33333332
Q ss_pred -CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 267 -GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 267 -~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+.+.+++++++++|.... .......+.+||.+.
T Consensus 227 ~g~~~~~~~~~g~~H~~~~--~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 227 NNINHVYWLIQGGGHDFNV--WKPGLWNFLQMADEA 260 (268)
T ss_dssp TTCCCEEEEETTCCSSHHH--HHHHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCCcCHhH--HHHHHHHHHHHHHhc
Confidence 246899999999998753 223345667777654
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.5e-18 Score=152.92 Aligned_cols=106 Identities=12% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCCCcEEEEccCCCChhhhHHh-hHhhc--cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc------CCC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTN-IIPHM--IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH------SVK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~-~~~~l--~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l------~~~ 116 (315)
+.++|+|||||||+++....|.. +++.| ..+|+|+++|++|||.|..+.........++++.++++.+ +.+
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~v~~~la~ll~~L~~~~g~~~~ 145 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQASQNVRIVGAEVAYLVGVLQSSFDYSPS 145 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 34578899999999875335876 66666 3579999999999998742111112223455666666655 468
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+++||||||||.+|+.+|.++|++|.++++++++.
T Consensus 146 ~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 146 NVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred cEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 99999999999999999999999999999887654
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.1e-18 Score=152.88 Aligned_cols=106 Identities=12% Similarity=0.160 Sum_probs=83.3
Q ss_pred CCCCCcEEEEccCCCChhhhHHh-hHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc----C--CC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTN-IIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH----S--VK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~-~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l----~--~~ 116 (315)
++++++||||||++++....|.. +++.+.+ +|+|+++|++|||.|............++++.++++.+ + .+
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~~~~~~~~~~~dl~~~i~~L~~~~g~~~~ 146 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQAVQNIRIVGAETAYLIQQLLTELSYNPE 146 (452)
T ss_dssp CTTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHHHHHhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 45678999999999877225876 6677755 79999999999999852211122233466777777776 6 78
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+++|+||||||.+|+.+|.++|++|.++++++++.
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 147 NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred cEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 99999999999999999999999999999997653
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.4e-18 Score=152.38 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=83.3
Q ss_pred CCCCCcEEEEccCCCChhhhHHh-hHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc----CC--C
Q 021229 46 NDSKPDLVLIHGLGANALWQWTN-IIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH----SV--K 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~-~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l----~~--~ 116 (315)
++++++||||||++++....|.. +.+.+.+ +|+|+++|++|||.|............++++.++++.+ ++ +
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~li~~L~~~~g~~~~ 146 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAEIAFLVQVLSTEMGYSPE 146 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhHhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 45678999999999887235877 5677654 79999999999999852211122234567778888777 54 8
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+++|+||||||.+|+.+|.++|++|.++++++++.
T Consensus 147 ~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 147 NVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp GEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred ceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 99999999999999999999999999999997654
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-15 Score=133.40 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=65.6
Q ss_pred CCCCcEEEEccCCCChhh--------hHHhhHhhc-cccceEEeecCCCCCCCCCC-CCCCCchhH-------HHHHHHH
Q 021229 47 DSKPDLVLIHGLGANALW--------QWTNIIPHM-IHYFNVYVPDLLFFGDSFTT-RPERSESFQ-------AECVMRV 109 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~--------~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~-------a~~~~~~ 109 (315)
+..|.|++.||.+.+... .+......+ ..+|.|+++|+||+|.|... .+....... ...+..+
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~ 151 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKEL 151 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHH
Confidence 345678899998642110 111122233 66799999999999999742 221111111 2223345
Q ss_pred HHHcCC---CceEEEEEchhHHHHHHHHHhhhhh-----hceeEEeeCC
Q 021229 110 MEAHSV---KKLSLVGLSYGGFVGYSMAAQFKEK-----IEKVVICCSG 150 (315)
Q Consensus 110 l~~l~~---~~v~lvGhSmGG~ia~~~a~~~p~~-----v~~lil~~~~ 150 (315)
++.+++ +++.|+||||||.+++.+|..+|+. +.+++..+++
T Consensus 152 ~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p 200 (377)
T 4ezi_A 152 ANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAP 200 (377)
T ss_dssp HHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCC
T ss_pred hhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcc
Confidence 555565 7899999999999999999998874 4455544443
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-16 Score=138.99 Aligned_cols=103 Identities=23% Similarity=0.284 Sum_probs=87.5
Q ss_pred CCCCcEEEEccCCCChh-----hhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEE
Q 021229 47 DSKPDLVLIHGLGANAL-----WQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSL 120 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~-----~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~l 120 (315)
..+++|||+||++.+.. ..|..+.+.|.+. |+|+++|+||+|.|..+ .......++++.++++.++.++++|
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~~--~~~~~~l~~~i~~~l~~~~~~~v~l 83 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGP--NGRGEQLLAYVKTVLAATGATKVNL 83 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSST--TSHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 45779999999987761 2588899988865 99999999999988532 3445566888999999999999999
Q ss_pred EEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
|||||||.++..++.++|++|+++|+++++.
T Consensus 84 vGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 84 VGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp EEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 9999999999999999999999999998643
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.66 E-value=7.9e-17 Score=140.42 Aligned_cols=106 Identities=14% Similarity=0.243 Sum_probs=83.7
Q ss_pred CCCCCcEEEEccCCCCh---------hhhH----HhhHhhccc-cce---EEeecCCCCCCCCCCC----CCCCchhHHH
Q 021229 46 NDSKPDLVLIHGLGANA---------LWQW----TNIIPHMIH-YFN---VYVPDLLFFGDSFTTR----PERSESFQAE 104 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~---------~~~w----~~~~~~l~~-~~~---vi~~D~~G~G~S~~~~----~~~~~~~~a~ 104 (315)
...+++||||||++.++ ...| ..+++.|.+ .|+ |+++|++|+|.|.... ........++
T Consensus 37 ~~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~~~~~~~~~~~l~~ 116 (342)
T 2x5x_A 37 TATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQYNYHSSTKYAIIKT 116 (342)
T ss_dssp CCCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGGCCBCHHHHHHHHH
T ss_pred CCCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccccCCHHHHHHHHHH
Confidence 44567899999998842 1358 888888876 477 9999999999875432 1122233466
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
.+.++++.++.++++||||||||+++..++.++ |++|+++|+++++.
T Consensus 117 ~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 117 FIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 677777888889999999999999999999999 99999999998654
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-17 Score=148.74 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=79.6
Q ss_pred CCCCCcEEEEccCCCChhhhHHh-hHhhcc-c-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc------CCC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTN-IIPHMI-H-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH------SVK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~-~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l------~~~ 116 (315)
++++|+|||||||+.+....|.. +.+.+. . +|+|+++|++|||.|..+.........++++.++++.+ +++
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~~~~~~~~~a~~l~~ll~~L~~~~g~~~~ 146 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPS 146 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 34578899999999876435766 555543 3 69999999999997742111122333466777777765 478
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+++||||||||.||..+|.++|+ |.++++++++.
T Consensus 147 ~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 147 QVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp GEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred hEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 99999999999999999999999 99999887654
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=135.42 Aligned_cols=100 Identities=21% Similarity=0.160 Sum_probs=84.4
Q ss_pred CCCCcEEEEccCCCChh----hhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEE
Q 021229 47 DSKPDLVLIHGLGANAL----WQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLV 121 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~----~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lv 121 (315)
+.+++|||+||++++.. +.|..+.+.|.+. |+|+++|+||+|.|. ......++++.++++.++.++++||
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s~-----~~~~~~~~~i~~~~~~~~~~~v~lv 79 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLI 79 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCch-----hhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 35789999999887642 3588899888765 999999999999774 2334567888889999998999999
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
||||||.++..++.++|++|+++|+++++.
T Consensus 80 GhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 80 GHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred EECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 999999999999999999999999998643
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.1e-16 Score=144.66 Aligned_cols=106 Identities=11% Similarity=0.152 Sum_probs=81.3
Q ss_pred CCCCCcEEEEccCCCChhhhHHh-hHhhccc--cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc----C--CC
Q 021229 46 NDSKPDLVLIHGLGANALWQWTN-IIPHMIH--YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH----S--VK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~-~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l----~--~~ 116 (315)
++++++|||+||++++....|.. +.+.|.+ +|+|+++|+||||.|............++++.++++.+ + .+
T Consensus 67 ~~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~~~~~~~~~~~dl~~~i~~l~~~~g~~~~ 146 (432)
T 1gpl_A 67 NLNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQASQNIRVVGAEVAYLVQVLSTSLNYAPE 146 (432)
T ss_dssp CTTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchhhHhhHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 34578999999999887325876 7777764 79999999999998852211112233456666776665 4 68
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+++|+||||||.+|+.+|.++|+++.+++++++..
T Consensus 147 ~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 147 NVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp GEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred cEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 99999999999999999999999999999887543
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.62 E-value=9.3e-15 Score=126.13 Aligned_cols=118 Identities=17% Similarity=0.092 Sum_probs=79.1
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccC--CCChhhhHHhh---Hhhccc-cceEEeecCCCC-CCCCCCCC--------CC
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGL--GANALWQWTNI---IPHMIH-YFNVYVPDLLFF-GDSFTTRP--------ER 97 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~--~~~~~~~w~~~---~~~l~~-~~~vi~~D~~G~-G~S~~~~~--------~~ 97 (315)
.|..+.++..+ .....|+|||+||+ +.+.. .|... ...+.+ .+.|+++|.++. +.++...+ ..
T Consensus 19 ~~~~i~v~~~p-~~~~~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~~~ 96 (304)
T 1sfr_A 19 MGRDIKVQFQS-GGANSPALYLLDGLRAQDDFS-GWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTY 96 (304)
T ss_dssp TTEEEEEEEEC-CSTTBCEEEEECCTTCCSSSC-HHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEECC
T ss_pred CCCceEEEECC-CCCCCCEEEEeCCCCCCCCcc-hhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccccc
Confidence 35567777443 23457889999998 44543 46653 234443 589999998654 22221111 11
Q ss_pred Cc-hhHHHHHHHHHHH-cCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 98 SE-SFQAECVMRVMEA-HSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 98 ~~-~~~a~~~~~~l~~-l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
.. .+.++++..++++ ++++ +++|+||||||.+|+.++.++|+++++++++++...
T Consensus 97 ~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 155 (304)
T 1sfr_A 97 KWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLD 155 (304)
T ss_dssp BHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSC
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 22 2234667777776 5654 899999999999999999999999999998876543
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-14 Score=125.07 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=77.1
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEEc
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGLS 124 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhS 124 (315)
.+++++|+|+||++++.. .|..+...|. ++|+++|+|+ . .+..+...+++++.+.++.+. ..+++|+|||
T Consensus 43 ~~~~~~l~~~hg~~g~~~-~~~~~~~~l~--~~v~~~~~~~--~----~~~~~~~~~a~~~~~~i~~~~~~~~~~l~G~S 113 (316)
T 2px6_A 43 QSSERPLFLVHPIEGSTT-VFHSLASRLS--IPTYGLQCTR--A----APLDSIHSLAAYYIDCIRQVQPEGPYRVAGYS 113 (316)
T ss_dssp CCSSCCEEEECCTTCCSG-GGHHHHHHCS--SCEEEECCCT--T----SCTTCHHHHHHHHHHHHTTTCSSCCCEEEEET
T ss_pred CCCCCeEEEECCCCCCHH-HHHHHHHhcC--CCEEEEECCC--C----CCcCCHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 345779999999998875 6998888886 9999999983 1 233455667788888887776 4789999999
Q ss_pred hhHHHHHHHHHhhhh---h---hceeEEeeCCC
Q 021229 125 YGGFVGYSMAAQFKE---K---IEKVVICCSGV 151 (315)
Q Consensus 125 mGG~ia~~~a~~~p~---~---v~~lil~~~~~ 151 (315)
|||.+|+++|.+.++ . +++++++++.+
T Consensus 114 ~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~~ 146 (316)
T 2px6_A 114 YGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 146 (316)
T ss_dssp HHHHHHHHHHHHHHHHC---CCCCEEEEESCSS
T ss_pred HHHHHHHHHHHHHHHcCCcccccceEEEEcCCc
Confidence 999999999998864 4 88999887653
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-13 Score=117.89 Aligned_cols=116 Identities=11% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC--CChhhhHHh---hHhhccc-cceEEeecCCCCC-CCCCCCC--CCCchhHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG--ANALWQWTN---IIPHMIH-YFNVYVPDLLFFG-DSFTTRP--ERSESFQA 103 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~--~~~~~~w~~---~~~~l~~-~~~vi~~D~~G~G-~S~~~~~--~~~~~~~a 103 (315)
.|..+.++..+. + .|+|||+||++ .+.. .|.. +...+.+ .+.|+++|.++.+ .++...+ .....+.+
T Consensus 21 ~~~~~~~~~~P~-~--~p~vvllHG~~~~~~~~-~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~~~~~~~~~~~~~~~ 96 (280)
T 1r88_A 21 MGRDIPVAFLAG-G--PHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLS 96 (280)
T ss_dssp TTEEEEEEEECC-S--SSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHH
T ss_pred cCCcceEEEeCC-C--CCEEEEECCCCCCCChh-hhhhcccHHHHHhcCCeEEEEECCCCCCccCCCCCCCCCcHHHHHH
Confidence 466666663322 2 47899999995 3443 4654 3344443 4899999996532 2221111 12223456
Q ss_pred HHHHHHHHH-cCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 104 ECVMRVMEA-HSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 104 ~~~~~~l~~-l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+++..++++ ++++ +++|+||||||.+|+.++.++|+++++++++++...
T Consensus 97 ~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 148 (280)
T 1r88_A 97 AELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 148 (280)
T ss_dssp THHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred HHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccC
Confidence 678888877 6765 899999999999999999999999999998876543
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=5.1e-14 Score=119.94 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=79.9
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC--CChhhhHHhhH---hhccc-cceEEeecCCCC-CCCCCCCC--------CC
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG--ANALWQWTNII---PHMIH-YFNVYVPDLLFF-GDSFTTRP--------ER 97 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~--~~~~~~w~~~~---~~l~~-~~~vi~~D~~G~-G~S~~~~~--------~~ 97 (315)
.|..+.++.++. . +++|||+||++ .+.. .|..+. +.+.+ .+.|+++|.+|. +.++...+ ..
T Consensus 16 ~~~~~~v~~~p~-~--~~~v~llHG~~~~~~~~-~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~~~~~~~g~~~~~ 91 (280)
T 1dqz_A 16 MGRDIKVQFQGG-G--PHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTY 91 (280)
T ss_dssp TTEEEEEEEECC-S--SSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCSSSCTTTTCCSCC
T ss_pred cCceeEEEEcCC-C--CCEEEEECCCCCCCCcc-cccccCcHHHHHhcCCeEEEEECCCCCccccCCCCCCccccccccc
Confidence 355677776532 2 35899999995 3543 576543 33544 599999998753 22221111 11
Q ss_pred C-chhHHHHHHHHHHH-cCCC--ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 98 S-ESFQAECVMRVMEA-HSVK--KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 98 ~-~~~~a~~~~~~l~~-l~~~--~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
. ..+.++++..++++ ++++ +++|+||||||.+|+.++.++|+++.+++++++...
T Consensus 92 ~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~ 150 (280)
T 1dqz_A 92 KWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLN 150 (280)
T ss_dssp BHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCccc
Confidence 2 22345778888887 6764 899999999999999999999999999999876553
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.57 E-value=8.6e-14 Score=131.29 Aligned_cols=125 Identities=13% Similarity=0.068 Sum_probs=82.1
Q ss_pred eeecCCCceEEEEEecCCC-CCCCcEEEEccCCCCh---h---hhHHh-hH---hhcc-ccceEEeecCCCCCCCCCCCC
Q 021229 28 VTDLQDGSVMHCWVPKTRN-DSKPDLVLIHGLGANA---L---WQWTN-II---PHMI-HYFNVYVPDLLFFGDSFTTRP 95 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~-~~~~~vvllHG~~~~~---~---~~w~~-~~---~~l~-~~~~vi~~D~~G~G~S~~~~~ 95 (315)
.+...||..++.+...+.+ +..|.||++||++.+. . ..|.. +. ..|+ .+|.|+++|+||+|.|.....
T Consensus 29 ~i~~~DG~~L~~~~~~P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~ 108 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYV 108 (615)
T ss_dssp EEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCC
T ss_pred EEECCCCCEEEEEEEeCCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCccc
Confidence 3445689888887543322 3446778889987642 0 12322 11 4454 469999999999999975422
Q ss_pred CCC------ch---hHHHHHHHHH---HHc-CC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 96 ERS------ES---FQAECVMRVM---EAH-SV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 96 ~~~------~~---~~a~~~~~~l---~~l-~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
... .. ...+++.+++ ... .. .++.++||||||.+++.+|..+|++++++|.+++...
T Consensus 109 ~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 109 MTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMID 180 (615)
T ss_dssp TTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCC
T ss_pred cccccccccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccc
Confidence 210 10 2234444443 333 22 3899999999999999999988999999998876554
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-14 Score=130.33 Aligned_cols=104 Identities=9% Similarity=0.199 Sum_probs=76.1
Q ss_pred CCCcEEEEccCCCChhhhHH--hhHhhcccc--ceEEeecCCCCCCCCCCCC----------CCCchhHHHHHHHHHHHc
Q 021229 48 SKPDLVLIHGLGANALWQWT--NIIPHMIHY--FNVYVPDLLFFGDSFTTRP----------ERSESFQAECVMRVMEAH 113 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~--~~~~~l~~~--~~vi~~D~~G~G~S~~~~~----------~~~~~~~a~~~~~~l~~l 113 (315)
.+.||||+||..++....|. .....+++. ++|+++|+||||+|..... ..+....++|+.++++++
T Consensus 37 ~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~l 116 (446)
T 3n2z_B 37 NGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHL 116 (446)
T ss_dssp TTCEEEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCCCccccccchhhccCCHHHHHHHHHHHHHHH
Confidence 34579999997766542232 233444443 6999999999999963211 113345678888888877
Q ss_pred CC-------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 114 SV-------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 114 ~~-------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
.. .+++|+||||||++|+.++.++|+.|.++|+.++++
T Consensus 117 ~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 117 KRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 161 (446)
T ss_dssp HHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccch
Confidence 54 389999999999999999999999999999876554
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.51 E-value=2.2e-14 Score=126.70 Aligned_cols=96 Identities=11% Similarity=0.161 Sum_probs=70.0
Q ss_pred CCCCcEEEEccCCCChh------hhHHhhH----hhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHH----
Q 021229 47 DSKPDLVLIHGLGANAL------WQWTNII----PHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVME---- 111 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~------~~w~~~~----~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~---- 111 (315)
..++|||||||++++.. ..|..+. +.|.+ +|+|+++|++|||.|.. .+..+.+.++
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s~~---------~a~~l~~~i~~~~v 74 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSNWD---------RACEAYAQLVGGTV 74 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCHHH---------HHHHHHHHHHCEEE
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCccc---------cHHHHHHHHHhhhh
Confidence 35678999999987642 1376554 77764 59999999999997631 1122222222
Q ss_pred ------------------------H-cCCCceEEEEEchhHHHHHHHHHh-------------------hh------hhh
Q 021229 112 ------------------------A-HSVKKLSLVGLSYGGFVGYSMAAQ-------------------FK------EKI 141 (315)
Q Consensus 112 ------------------------~-l~~~~v~lvGhSmGG~ia~~~a~~-------------------~p------~~v 141 (315)
+ .+.++++||||||||.++..++.+ +| ++|
T Consensus 75 Dy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~~~V 154 (387)
T 2dsn_A 75 DYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGHHFV 154 (387)
T ss_dssp ECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCE
T ss_pred hhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccccce
Confidence 2 467899999999999999999983 26 689
Q ss_pred ceeEEeeCCC
Q 021229 142 EKVVICCSGV 151 (315)
Q Consensus 142 ~~lil~~~~~ 151 (315)
.++|+++++.
T Consensus 155 ~sLV~i~tP~ 164 (387)
T 2dsn_A 155 LSVTTIATPH 164 (387)
T ss_dssp EEEEEESCCT
T ss_pred eEEEEECCCC
Confidence 9999998654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.3e-16 Score=140.21 Aligned_cols=105 Identities=12% Similarity=0.190 Sum_probs=74.0
Q ss_pred CCCCcEEEEccCCCCh-------hhhHH----hhHhhccc-cceEEeecCCCCCCCCCCCC-------------------
Q 021229 47 DSKPDLVLIHGLGANA-------LWQWT----NIIPHMIH-YFNVYVPDLLFFGDSFTTRP------------------- 95 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~-------~~~w~----~~~~~l~~-~~~vi~~D~~G~G~S~~~~~------------------- 95 (315)
+.+++|||+||++++. ...|. .+.+.|.+ +|+|+++|++|||.|.....
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 4567999999997641 13474 58888865 59999999999998742100
Q ss_pred CCCchhHHHHHHHHHHHcC-CCceEEEEEchhHHHHHHHHHh--------------------------hhhhhceeEEee
Q 021229 96 ERSESFQAECVMRVMEAHS-VKKLSLVGLSYGGFVGYSMAAQ--------------------------FKEKIEKVVICC 148 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSmGG~ia~~~a~~--------------------------~p~~v~~lil~~ 148 (315)
.++...+++++.+++++++ .++++||||||||+++..+|.. +|++|.++|+++
T Consensus 130 ~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i~ 209 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTIA 209 (431)
T ss_dssp HHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEES
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEEC
Confidence 0001111223344555565 3899999999999999999876 578899999998
Q ss_pred CCC
Q 021229 149 SGV 151 (315)
Q Consensus 149 ~~~ 151 (315)
++.
T Consensus 210 tP~ 212 (431)
T 2hih_A 210 TPH 212 (431)
T ss_dssp CCT
T ss_pred CCC
Confidence 754
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.49 E-value=8.3e-13 Score=123.81 Aligned_cols=120 Identities=10% Similarity=0.035 Sum_probs=83.0
Q ss_pred eeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHh---hH-hhc-cccceEEeecCCCCCCCCCCCCCCCchh
Q 021229 28 VTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTN---II-PHM-IHYFNVYVPDLLFFGDSFTTRPERSESF 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~---~~-~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 101 (315)
.+...||..++++...+ +.+..|.||++||++.+.. .+.. .. ..+ ..+|.|+++|+||+|.|....... ..
T Consensus 13 ~i~~~DG~~L~~~~~~P~~~~~~P~vv~~~~~g~~~~-~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~~--~~ 89 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDV-FAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPH--VD 89 (587)
T ss_dssp EEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCH-HHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCTT--TT
T ss_pred EEECCCCCEEEEEEEECCCCCCeeEEEEECCcCCCcc-ccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCccccc--cc
Confidence 46667998888754322 2334577888899887653 2322 22 444 456999999999999997543221 12
Q ss_pred HHHHHHHHHHH---cC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 102 QAECVMRVMEA---HS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 102 ~a~~~~~~l~~---l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
..+++.++++. .. ..++.++||||||.+++.+|.++|+.++++|.+++.
T Consensus 90 ~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~ 143 (587)
T 3i2k_A 90 DEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMAS 143 (587)
T ss_dssp HHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCC
T ss_pred hhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCc
Confidence 34444444443 32 358999999999999999999999999999988765
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=123.80 Aligned_cols=126 Identities=11% Similarity=0.024 Sum_probs=81.8
Q ss_pred eeeecCCCceEEEEEecCCC-CCCCcEEEEccCCCChh----h---hHHhh---H-hhcc-ccceEEeecCCCCCCCCCC
Q 021229 27 SVTDLQDGSVMHCWVPKTRN-DSKPDLVLIHGLGANAL----W---QWTNI---I-PHMI-HYFNVYVPDLLFFGDSFTT 93 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~-~~~~~vvllHG~~~~~~----~---~w~~~---~-~~l~-~~~~vi~~D~~G~G~S~~~ 93 (315)
.++...||..++.+...+.+ +..|.||++||++.... + .|... . ..|. .+|.|+++|+||+|.|...
T Consensus 40 v~i~~~DG~~L~~~l~~P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~g~ 119 (652)
T 2b9v_A 40 VMVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGD 119 (652)
T ss_dssp EEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEECCCCcEEEEEEEecCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCCCc
Confidence 34556789888876543322 34467788898875420 0 12111 1 4444 4699999999999999754
Q ss_pred CCCCC------c---hhHHHHH---HHHHHHc-CC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 94 RPERS------E---SFQAECV---MRVMEAH-SV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 94 ~~~~~------~---~~~a~~~---~~~l~~l-~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
..... . ....+++ .+++... .. .++.++|+||||.+++.+|.++|++++++|.+++...
T Consensus 120 ~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d 193 (652)
T 2b9v_A 120 YVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVD 193 (652)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCC
T ss_pred ccccccccccccccccchhhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 22210 0 0223333 4444444 32 4899999999999999999989999999998876554
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=117.32 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=75.1
Q ss_pred ecCCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHH------------------hhHhhccc-cceEEeecCCCCC
Q 021229 30 DLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWT------------------NIIPHMIH-YFNVYVPDLLFFG 88 (315)
Q Consensus 30 ~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~------------------~~~~~l~~-~~~vi~~D~~G~G 88 (315)
...+|..++.+...+. .+..|.||++||++++.. .+. .+...|++ +|.|+++|+||||
T Consensus 98 ~~~~g~~l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~-~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G 176 (398)
T 3nuz_A 98 YPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKE-GLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAG 176 (398)
T ss_dssp CCSTTBCEEEEEEEESSCCSCEEEEEEECCTTCCHH-HHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSG
T ss_pred EcCCCcEEEEEEEeCCCCCCCccEEEEEcCCCCCcc-cccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCC
Confidence 3356777776654322 345678999999988653 121 34555554 5999999999999
Q ss_pred CCCCCCC-------C------------CCc-hhHHHHHHHHHHHcC------CCceEEEEEchhHHHHHHHHHhhhhhhc
Q 021229 89 DSFTTRP-------E------------RSE-SFQAECVMRVMEAHS------VKKLSLVGLSYGGFVGYSMAAQFKEKIE 142 (315)
Q Consensus 89 ~S~~~~~-------~------------~~~-~~~a~~~~~~l~~l~------~~~v~lvGhSmGG~ia~~~a~~~p~~v~ 142 (315)
.|..... . ... .....++.+.++.+. .+++.++||||||.+++.++... ++|+
T Consensus 177 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~~i~ 255 (398)
T 3nuz_A 177 EASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-TSIY 255 (398)
T ss_dssp GGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-TTCC
T ss_pred ccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-CcEE
Confidence 9853220 0 000 011234444555442 35799999999999998888765 4788
Q ss_pred eeEEee
Q 021229 143 KVVICC 148 (315)
Q Consensus 143 ~lil~~ 148 (315)
++|.++
T Consensus 256 a~v~~~ 261 (398)
T 3nuz_A 256 AFVYND 261 (398)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 887653
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=5.8e-12 Score=116.90 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=83.1
Q ss_pred eeecCCCceEEEEEecCC-CCCCCcEEEEccCCCChh--h-----hHH---------------hhHhhcc-ccceEEeec
Q 021229 28 VTDLQDGSVMHCWVPKTR-NDSKPDLVLIHGLGANAL--W-----QWT---------------NIIPHMI-HYFNVYVPD 83 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~--~-----~w~---------------~~~~~l~-~~~~vi~~D 83 (315)
.+...||.+++.+...+. .++.|.||+.||+|.+.. . .|. .....|+ .+|.|+++|
T Consensus 45 ~i~~~DG~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D 124 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVA 124 (560)
T ss_dssp EEECTTSCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEE
T ss_pred EEECCCCcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEc
Confidence 455578998888765433 344578889999987631 0 010 1133444 459999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHH---HcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 84 LLFFGDSFTTRPERSESFQAECVMRVME---AHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 84 ~~G~G~S~~~~~~~~~~~~a~~~~~~l~---~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+||+|.|........ ....+++.+.++ .... .++.++||||||.+++.+|...|+.++++|..++..
T Consensus 125 ~RG~G~S~G~~~~~~-~~~~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~~ 196 (560)
T 3iii_A 125 LRGSDKSKGVLSPWS-KREAEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGLN 196 (560)
T ss_dssp CTTSTTCCSCBCTTS-HHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCCC
T ss_pred CCCCCCCCCccccCC-hhHHHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCcc
Confidence 999999975432221 123444444444 3322 589999999999999999999999999999876544
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-11 Score=102.33 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=67.2
Q ss_pred CCCcEEEEccCCCChhhhHH-------hhHhhccc-----cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc-C
Q 021229 48 SKPDLVLIHGLGANALWQWT-------NIIPHMIH-----YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH-S 114 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~-------~~~~~l~~-----~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l-~ 114 (315)
+.|.||++||.+.+.. .|. .+++.|.. .+.|+++|.+| .+. .......+..+++..+++.. .
T Consensus 68 ~~Pvlv~lHG~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~--~~~--~~~~~~~~~~~~l~~~i~~~~~ 142 (297)
T 1gkl_A 68 KYNIFYLMHGGGENEN-TIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG--GNC--TAQNFYQEFRQNVIPFVESKYS 142 (297)
T ss_dssp CCEEEEEECCTTCCTT-STTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS--TTC--CTTTHHHHHHHTHHHHHHHHSC
T ss_pred CCCEEEEECCCCCCcc-hhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC--Ccc--chHHHHHHHHHHHHHHHHHhCC
Confidence 4567888999877653 242 34444432 38899999875 221 11112233456677777654 2
Q ss_pred C--------------CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 115 V--------------KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 115 ~--------------~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
. +++.|+|+||||.+|+.++.++|+++++++.+++.
T Consensus 143 ~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~ 192 (297)
T 1gkl_A 143 TYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGD 192 (297)
T ss_dssp SSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCC
T ss_pred ccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccc
Confidence 2 45899999999999999999999999999988654
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=114.36 Aligned_cols=125 Identities=15% Similarity=0.094 Sum_probs=79.3
Q ss_pred ceeeeeeec--CCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhH--------------H----hhHhhccc-cceE
Q 021229 23 GFRSSVTDL--QDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQW--------------T----NIIPHMIH-YFNV 79 (315)
Q Consensus 23 ~~~~~~~~~--~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w--------------~----~~~~~l~~-~~~v 79 (315)
|+....+.+ .+|..+..+...+. .++.|.||++||++++.. .+ . .+...|++ +|.|
T Consensus 84 g~~~e~v~~~~~~g~~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~-~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~V 162 (391)
T 3g8y_A 84 GYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKE-GLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVA 162 (391)
T ss_dssp TEEEEEEEECCSTTCCEEEEEEEETTCCSCEEEEEEECCTTCCHH-HHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEE
T ss_pred CEEEEEEEEEcCCCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCch-hhccccccccccchhhcchHHHHHHHHHHCCCEE
Confidence 344433343 46777776654332 345678999999988753 11 1 34555554 5999
Q ss_pred EeecCCCCCCCCCCCCC-----CCchhH---------------HHHHHHHHHHc------CCCceEEEEEchhHHHHHHH
Q 021229 80 YVPDLLFFGDSFTTRPE-----RSESFQ---------------AECVMRVMEAH------SVKKLSLVGLSYGGFVGYSM 133 (315)
Q Consensus 80 i~~D~~G~G~S~~~~~~-----~~~~~~---------------a~~~~~~l~~l------~~~~v~lvGhSmGG~ia~~~ 133 (315)
+++|++|||.|...... ...... ..++.+.++.+ +.+++.++||||||.+++.+
T Consensus 163 l~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~ 242 (391)
T 3g8y_A 163 VAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVL 242 (391)
T ss_dssp EECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHH
Confidence 99999999998643111 111111 13444444443 23579999999999999988
Q ss_pred HHhhhhhhceeEEeeC
Q 021229 134 AAQFKEKIEKVVICCS 149 (315)
Q Consensus 134 a~~~p~~v~~lil~~~ 149 (315)
+... ++|+++|++++
T Consensus 243 a~~~-~~i~a~v~~~~ 257 (391)
T 3g8y_A 243 GVLD-KDIYAFVYNDF 257 (391)
T ss_dssp HHHC-TTCCEEEEESC
T ss_pred HHcC-CceeEEEEccC
Confidence 8754 57888887654
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=3.5e-11 Score=108.42 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=46.2
Q ss_pred cCCCCeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 238 KITQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 238 ~i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++++|+++++|++|.++|.+.++.+.+.+ +.+.+++++++++|....+. -...+.+||.+
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~---~~~d~l~WL~~ 404 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIF---GLVPSLWFIKQ 404 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHH---THHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhh---hHHHHHHHHHH
Confidence 57899999999999999999988888765 23578999999999886521 13455566654
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-11 Score=101.09 Aligned_cols=198 Identities=14% Similarity=0.201 Sum_probs=111.6
Q ss_pred CCceEEEEEecCC----CCCCCcEEEEccCCCCh-hhhHHhhHhhcc--cc---ceEEeecCCCCC----------CCCC
Q 021229 33 DGSVMHCWVPKTR----NDSKPDLVLIHGLGANA-LWQWTNIIPHMI--HY---FNVYVPDLLFFG----------DSFT 92 (315)
Q Consensus 33 ~g~~~~~~~~~~~----~~~~~~vvllHG~~~~~-~~~w~~~~~~l~--~~---~~vi~~D~~G~G----------~S~~ 92 (315)
+|..+.++...+. +.+-|.|+++||.+... ...|......+. .+ +-|+.+|.++.+ .+..
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 4555565543322 12346788999965311 112433333332 22 889999998621 0100
Q ss_pred C-------CC-----CCC------chhHHHHHHHHHHH-cCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 93 T-------RP-----ERS------ESFQAECVMRVMEA-HSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 93 ~-------~~-----~~~------~~~~a~~~~~~l~~-l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
. .. ... ..+..+++..+++. +++ +++.|+||||||.+++.++.++|+.+.+++++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 0 00 001 11123344444544 333 689999999999999999999999999998875442
Q ss_pred ccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccc
Q 021229 152 CLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDR 231 (315)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (315)
.... . .+... ...+.... .
T Consensus 188 ~~~~-----~----------------------------~~~~~----------~~~~~~~~---------~--------- 206 (275)
T 2qm0_A 188 WWNN-----K----------------------------SVLEK----------EENLIIEL---------N--------- 206 (275)
T ss_dssp THHH-----H----------------------------GGGGG----------TTHHHHHH---------H---------
T ss_pred eeCh-----H----------------------------HHHHH----------HHHHHhhh---------c---------
Confidence 1100 0 00000 00110000 0
Q ss_pred cccccccCCCCeEEEEeCCCCCCchHHHHHHHhhc---C-C--CcEEEEEcCCCCccccCChHHHHHHHHHHH
Q 021229 232 KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL---G-D--NAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298 (315)
Q Consensus 232 ~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~---~-~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 298 (315)
......|+++++|+.|..++.+.++.+.+.+ . . +.++.++++++|+... +..+.+.+ +|+
T Consensus 207 ----~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~--~~~l~~~l-~~l 272 (275)
T 2qm0_A 207 ----NAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASVV--PTSLSKGL-RFI 272 (275)
T ss_dssp ----TCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTHH--HHHHHHHH-HHH
T ss_pred ----ccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCccccH--HHHHHHHH-HHH
Confidence 1234579999999999888888788887766 2 1 3578899999997553 33444433 454
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-11 Score=107.36 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=64.5
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcccc-----ceEEeecCCCCC-CCC-CCCCCCCchhHHHHHHHHHHHc-C----
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHY-----FNVYVPDLLFFG-DSF-TTRPERSESFQAECVMRVMEAH-S---- 114 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-----~~vi~~D~~G~G-~S~-~~~~~~~~~~~a~~~~~~l~~l-~---- 114 (315)
+..|.|+++||.+.........+++.|... ..|+++|.+|++ .+. .........+..+++..++++. .
T Consensus 195 ~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~r~~~~~~~~~~~~~l~~el~~~i~~~~~~~~d 274 (403)
T 3c8d_A 195 EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDR 274 (403)
T ss_dssp CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHHHHHHSSSCHHHHHHHHHTHHHHHHHHSCCCCC
T ss_pred CCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCccccccCCChHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 356789999994311000011234455433 349999998632 111 0100111222345566666653 3
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
.+++.|+||||||.+|+.++.++|+++.+++++++..
T Consensus 275 ~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~ 311 (403)
T 3c8d_A 275 ADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 311 (403)
T ss_dssp GGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred CCceEEEEECHHHHHHHHHHHhCchhhcEEEEecccc
Confidence 2589999999999999999999999999998876543
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=8.6e-09 Score=88.77 Aligned_cols=139 Identities=14% Similarity=0.207 Sum_probs=83.8
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhc-eeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhcc
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIE-KVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFK 193 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~-~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (315)
.++|.|.|+|+||.+++.++..+|+.++ +++++++.+.....+.. . .....
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-------~---------------------~~~~~ 61 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-------Y---------------------TSCMY 61 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-------G---------------------GGGST
T ss_pred cceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-------H---------------------HHHhh
Confidence 3689999999999999999999999998 77766543211110000 0 00000
Q ss_pred CCCCCCCCcch-hHHHHHHHHHHHHHHHHHhhhccCccccccccccCC-CCeEEEEeCCCCCCchHHHHHHHhhcCC---
Q 021229 194 RPPLSLVPSCL-LSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKIT-QPTLILWGEHDQIFPLELGRRLKSHLGD--- 268 (315)
Q Consensus 194 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~P~lvi~G~~D~~~~~~~~~~l~~~~~~--- 268 (315)
.. .+... ..++ ...+.. .....+.+++ .|++++||++|.+||++.++++.+.+..
T Consensus 62 ~~----~~~~~~~~~~------------~~~~~~----~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~ 121 (318)
T 2d81_A 62 NG----YPSITTPTAN------------MKSWSG----NQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDN 121 (318)
T ss_dssp TC----CCCCHHHHHH------------HHHHBT----TTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSC
T ss_pred cc----CCCCCCHHHH------------HHHhhc----ccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCC
Confidence 00 00000 0000 000110 1112223333 5999999999999999999999876631
Q ss_pred --CcEEEEEcCCCCccccCCh-------------------HHHHHHHHHHHhcC
Q 021229 269 --NAQLIVIKKAGHAFNYEKP-------------------KEFYKHLKSFLLDS 301 (315)
Q Consensus 269 --~~~~~~i~~~gH~~~~e~p-------------------~~~~~~i~~fl~~~ 301 (315)
+.++++++++||.+..+.+ -.-...|.+|+...
T Consensus 122 ~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~~~~i~~ff~g~ 175 (318)
T 2d81_A 122 SANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGS 175 (318)
T ss_dssp GGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCHHHHHHHHHHSS
T ss_pred CcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChHHHHHHHHHhcc
Confidence 3688999999998766544 12345788888654
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.3e-08 Score=102.21 Aligned_cols=209 Identities=13% Similarity=0.069 Sum_probs=117.6
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEEch
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGLSY 125 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSm 125 (315)
+..++++++|+.++... .|..+...+. .+.|++++.++.. ..++...+.+..+. ..++.|+||||
T Consensus 1056 ~~~~~L~~l~~~~g~~~-~y~~la~~L~-~~~v~~l~~~~~~------------~~~~~~~~~i~~~~~~gp~~l~G~S~ 1121 (1304)
T 2vsq_A 1056 DQEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIEEE------------DRLDRYADLIQKLQPEGPLTLFGYSA 1121 (1304)
T ss_dssp TSCCEEECCCCTTCBGG-GGHHHHTTCC-SCEEEECBCCCST------------THHHHHHHHHHHHCCSSCEEEEEETT
T ss_pred ccCCcceeecccccchH-HHHHHHhccc-ccceEeecccCHH------------HHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 34568999999887764 5777888887 7899998874321 13344455555554 35899999999
Q ss_pred hHHHHHHHHHhhhhh---hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhc-cC-CCCCCC
Q 021229 126 GGFVGYSMAAQFKEK---IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFF-KR-PPLSLV 200 (315)
Q Consensus 126 GG~ia~~~a~~~p~~---v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 200 (315)
||.+|.++|.+..+. +..++++++............ ... .....+.. ... .. ......
T Consensus 1122 Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~----~~~------------~~~~~l~~-~~~~~~~~~~~~l 1184 (1304)
T 2vsq_A 1122 GCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGR----TVE------------SDVEALMN-VNRDNEALNSEAV 1184 (1304)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC---------CHH------------HHHHHHHT-TCC-------CTT
T ss_pred CchHHHHHHHHHHhCCCceeEEEEecCcccccccccccc----cch------------hhHHHHHH-hhhhhhhhcchhc
Confidence 999999999987653 778888875432211100000 000 00001100 000 00 000001
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
.......+.. .. ....... .-+.+++|+++++|++|.. +.+....+.+......+++.++ ++|
T Consensus 1185 ~~~~l~~~~~----~~-----~~~~~~~------~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~~~~~~~~v~-G~H 1247 (1304)
T 2vsq_A 1185 KHGLKQKTHA----FY-----SYYVNLI------STGQVKADIDLLTSGADFD-IPEWLASWEEATTGVYRMKRGF-GTH 1247 (1304)
T ss_dssp TGGGHHHHHH----HH-----HHHHC-----------CBSSEEEEEECSSCCC-CCSSEECSSTTBSSCCCEEECS-SCT
T ss_pred chHHHHHHHH----HH-----HHHHHHh------ccCCcCCCEEEEEecCccc-cccchhhHHHHhCCCeEEEEeC-CCH
Confidence 1111111111 00 0000000 0156889999999999873 2222333444443456788887 599
Q ss_pred ccccCCh--HHHHHHHHHHHhcCCC
Q 021229 281 AFNYEKP--KEFYKHLKSFLLDSQP 303 (315)
Q Consensus 281 ~~~~e~p--~~~~~~i~~fl~~~~~ 303 (315)
+.+++.| +++++.|.++|.....
T Consensus 1248 ~~ml~~~~~~~~a~~l~~~L~~~~~ 1272 (1304)
T 2vsq_A 1248 AEMLQGETLDRNAEILLEFLNTQTV 1272 (1304)
T ss_dssp TGGGSHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHCCCHHHHHHHHHHHHHHhccch
Confidence 9988765 4899999999986543
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.6e-07 Score=79.63 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=29.5
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~ 149 (315)
+++.|+||||||.+|+.++.+ |+.+.+++.+++
T Consensus 141 ~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~ 173 (278)
T 2gzs_A 141 QRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASP 173 (278)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESG
T ss_pred CceEEEEECHHHHHHHHHHhC-ccccCeEEEeCc
Confidence 468999999999999999999 999999887754
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.2e-07 Score=82.35 Aligned_cols=132 Identities=12% Similarity=0.113 Sum_probs=81.8
Q ss_pred HHHHHHHHHHc-CC-CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc
Q 021229 103 AECVMRVMEAH-SV-KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 103 a~~~~~~l~~l-~~-~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
.+++...++.. .. .+..|+||||||..++.++.++|+.+.+++.+++...+...
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~------------------------ 177 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSP------------------------ 177 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTT------------------------
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChH------------------------
Confidence 34444455443 22 24479999999999999999999999999887654311110
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCC-------C
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQ-------I 253 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~-------~ 253 (315)
.+.... .. .+.. ....+.|+++.+|+.|. .
T Consensus 178 ----------------------~~~~~~-~~-----------~~~~---------~~~~~~~l~l~~G~~d~~~~~~~~~ 214 (331)
T 3gff_A 178 ----------------------HYLTLL-EE-----------RVVK---------GDFKQKQLFMAIANNPLSPGFGVSS 214 (331)
T ss_dssp ----------------------HHHHHH-HH-----------HHHH---------CCCSSEEEEEEECCCSEETTTEECC
T ss_pred ----------------------HHHHHH-HH-----------Hhhc---------ccCCCCeEEEEeCCCCCCCccchHH
Confidence 000000 00 0000 01234799999999998 3
Q ss_pred CchHHHHHHHhhcC----C--CcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 254 FPLELGRRLKSHLG----D--NAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 254 ~~~~~~~~l~~~~~----~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
++.+..+++.+.+. + +.++.++++.+|.... +..+.+.+..++.....
T Consensus 215 ~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~--~~~~~~~l~~lf~~~~~ 268 (331)
T 3gff_A 215 YHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVS--HIGLYDGIRHLFKDFAI 268 (331)
T ss_dssp HHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHH--HHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEEECCCCCccccH--HHHHHHHHHHHHhhcCC
Confidence 55555455554431 1 4688999999998766 66777777777765444
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=98.63 E-value=9.8e-08 Score=87.35 Aligned_cols=118 Identities=15% Similarity=0.126 Sum_probs=69.9
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhcc-cc-ceEEeecCC----CCCCCCCCCCCCCchh--
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMI-HY-FNVYVPDLL----FFGDSFTTRPERSESF-- 101 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~-~~-~~vi~~D~~----G~G~S~~~~~~~~~~~-- 101 (315)
|...+++|.+....++.|.||+|||.+ ++... +......|. +. +.|+.+|+| |++.+...........
T Consensus 81 dcL~l~v~~P~~~~~~~PviV~iHGGg~~~g~~~~-~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~gl 159 (489)
T 1qe3_A 81 DCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSE-PLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGL 159 (489)
T ss_dssp CCCEEEEEEECSSCCSEEEEEEECCSTTTSCCTTS-GGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHH
T ss_pred CCCEEEEEeCCCCCCCCCEEEEECCCccccCCCCC-cccCHHHHHhcCCEEEEecCccCcccccCccccccccCCCCcch
Confidence 456788887643223357899999954 22221 222233343 33 999999999 6665532111111111
Q ss_pred -HHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 102 -QAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 102 -~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
......++++. .+ .++|.|+|||+||.++..++... ++.++++|+.++..
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 218 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 218 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCC
Confidence 11222333333 23 35799999999999998887754 45789998887644
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=4.5e-06 Score=71.22 Aligned_cols=97 Identities=13% Similarity=0.215 Sum_probs=56.8
Q ss_pred CCCcEEEEccCCCChhhhHHhh--Hhhccc--cceEEeecCCCCC----------------CCCCCC--------CCCCc
Q 021229 48 SKPDLVLIHGLGANALWQWTNI--IPHMIH--YFNVYVPDLLFFG----------------DSFTTR--------PERSE 99 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~--~~~l~~--~~~vi~~D~~G~G----------------~S~~~~--------~~~~~ 99 (315)
+-|.|.+|||++++.. .|... +..+.. ...++++|..-.+ .+.... .....
T Consensus 48 ~~PVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~ 126 (299)
T 4fol_A 48 RIPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMY 126 (299)
T ss_dssp CBCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHH
T ss_pred CcCEEEEECCCCCChH-HHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccccccccCCccccccccCccccCccHH
Confidence 3578889999998875 46532 223322 2567777643111 111000 01112
Q ss_pred hhHHHHHHHHHHHc-C---------CCceEEEEEchhHHHHHHHHHhhhh--hhceeE
Q 021229 100 SFQAECVMRVMEAH-S---------VKKLSLVGLSYGGFVGYSMAAQFKE--KIEKVV 145 (315)
Q Consensus 100 ~~~a~~~~~~l~~l-~---------~~~v~lvGhSmGG~ia~~~a~~~p~--~v~~li 145 (315)
.+..+++..+++.. . .++..|.||||||.-|+.+|.++|+ +..++.
T Consensus 127 ~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~ 184 (299)
T 4fol_A 127 DYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCS 184 (299)
T ss_dssp HHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEE
T ss_pred HHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEE
Confidence 34466666666542 2 2467899999999999999999754 444443
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1.3e-07 Score=86.68 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=73.4
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhccc-c-ceEEeecCC----CCCCCCCCCC---CCCc
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMIH-Y-FNVYVPDLL----FFGDSFTTRP---ERSE 99 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~~-~-~~vi~~D~~----G~G~S~~~~~---~~~~ 99 (315)
.|...+++|.+....++.|.||+|||.+ ++... +......|.+ . +.|+.+|+| ||+.+..... ....
T Consensus 82 edcl~l~v~~P~~~~~~~Pviv~iHGGg~~~g~~~~-~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~~~~ 160 (498)
T 2ogt_A 82 EDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSS-PWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAG 160 (498)
T ss_dssp SCCCEEEEEESCSSSCCEEEEEEECCSTTTSCCTTC-GGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGTTGG
T ss_pred CCCcEEEEEecCCCCCCCcEEEEEcCCccCCCCCCC-CcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccccCCC
Confidence 3567888887643234457899999976 33322 2222334443 3 999999999 8887753211 1111
Q ss_pred hhHHH---HHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 100 SFQAE---CVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 100 ~~~a~---~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
..... ...+++.. ++ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 161 n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 223 (498)
T 2ogt_A 161 NLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSG 223 (498)
T ss_dssp GHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred CcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCc
Confidence 11111 12223322 33 46799999999999998888764 34689999987654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.8e-07 Score=74.20 Aligned_cols=123 Identities=11% Similarity=0.098 Sum_probs=81.1
Q ss_pred eeecC--CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhH-HhhH------------------hhccccceEEeecC
Q 021229 28 VTDLQ--DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQW-TNII------------------PHMIHYFNVYVPDL 84 (315)
Q Consensus 28 ~~~~~--~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w-~~~~------------------~~l~~~~~vi~~D~ 84 (315)
++.++ .|..++||..... +.+.|.||+++|.++++.. | ..+. ..+.+...++.+|.
T Consensus 23 y~~v~~~~~~~lFywf~es~~~~~~~Pl~lwlnGGPGcSS~-~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDq 101 (255)
T 1whs_A 23 YITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSV-AYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDS 101 (255)
T ss_dssp EEEEETTTTEEEEEEEECCCGGGCSCCEEEEECCTTTBCTT-TTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECC
T ss_pred EEECCCCCCcEEEEEEEEecCCCCCCCEEEEECCCCchHHH-HHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEec
Confidence 56664 5678999976533 3457888999998776653 4 2111 11234479999997
Q ss_pred C-CCCCCCCCCC----CCCchhHHHHHHHHHHH-------cCCCceEEEEEchhHHHHHHHHHhhhh------hhceeEE
Q 021229 85 L-FFGDSFTTRP----ERSESFQAECVMRVMEA-------HSVKKLSLVGLSYGGFVGYSMAAQFKE------KIEKVVI 146 (315)
Q Consensus 85 ~-G~G~S~~~~~----~~~~~~~a~~~~~~l~~-------l~~~~v~lvGhSmGG~ia~~~a~~~p~------~v~~lil 146 (315)
| |.|.|..... ..+....++++.++++. +...+++|.|+|+||..+-.+|...-+ .++++++
T Consensus 102 PvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~i 181 (255)
T 1whs_A 102 PAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMV 181 (255)
T ss_dssp STTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEE
T ss_pred CCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEe
Confidence 5 9999864432 12344456666666653 244689999999999998888875432 4677777
Q ss_pred eeCCC
Q 021229 147 CCSGV 151 (315)
Q Consensus 147 ~~~~~ 151 (315)
.++..
T Consensus 182 gn~~~ 186 (255)
T 1whs_A 182 GNGLI 186 (255)
T ss_dssp EEECC
T ss_pred cCCcc
Confidence 76544
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.54 E-value=6.7e-07 Score=80.57 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=81.5
Q ss_pred eeeecCCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHh------------------hccccceEEeecC-C
Q 021229 27 SVTDLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIP------------------HMIHYFNVYVPDL-L 85 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~------------------~l~~~~~vi~~D~-~ 85 (315)
-+++++++..++||..... +.+.|.||++||.++++.. +..+.+ ...+..+++.+|+ .
T Consensus 24 Gyv~v~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~-~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~ 102 (452)
T 1ivy_A 24 GYLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSL-DGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPA 102 (452)
T ss_dssp EEEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCTH-HHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCST
T ss_pred EEEeeCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCC
Confidence 3678877788999987543 2357888999998776543 422211 1134589999997 6
Q ss_pred CCCCCCCCCCCC--CchhHHHH----HHHHHHH---cCCCceEEEEEchhHHHHHHHHHh----hhhhhceeEEeeCCCc
Q 021229 86 FFGDSFTTRPER--SESFQAEC----VMRVMEA---HSVKKLSLVGLSYGGFVGYSMAAQ----FKEKIEKVVICCSGVC 152 (315)
Q Consensus 86 G~G~S~~~~~~~--~~~~~a~~----~~~~l~~---l~~~~v~lvGhSmGG~ia~~~a~~----~p~~v~~lil~~~~~~ 152 (315)
|.|.|....... .....+++ +..+++. +...+++|.|+|+||..+-.+|.. .+-.++++++.++...
T Consensus 103 GtGfS~~~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 103 GVGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp TSTTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred CCCcCCcCCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccC
Confidence 999997432222 22223433 4445544 345789999999999966666654 3556889988876543
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.25 E-value=3.7e-06 Score=77.92 Aligned_cols=117 Identities=14% Similarity=0.052 Sum_probs=69.1
Q ss_pred CCCceEEEEEecCCCC-CCCcEEEEccCCC---ChhhhHHhhHhhcc--ccceEEeecCC----CCCCCC-CC--CCCCC
Q 021229 32 QDGSVMHCWVPKTRND-SKPDLVLIHGLGA---NALWQWTNIIPHMI--HYFNVYVPDLL----FFGDSF-TT--RPERS 98 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~-~~~~vvllHG~~~---~~~~~w~~~~~~l~--~~~~vi~~D~~----G~G~S~-~~--~~~~~ 98 (315)
.|...+++|.+....+ +.|.||+|||.+. +... .......|. .++-|+.+++| |++.+. .. ..+..
T Consensus 94 edcl~l~v~~P~~~~~~~~Pviv~iHGGg~~~g~~~~-~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~n~g 172 (543)
T 2ha2_A 94 EDCLYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASL-DVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVG 172 (543)
T ss_dssp SCCCEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTS-GGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHH
T ss_pred CcCCeEEEeecCCCCCCCCeEEEEECCCccccCCCCC-CcCChHHHHhcCCEEEEEecccccccccccCCCCCCCCCccc
Confidence 3567888898643222 2478899999652 2211 111223343 36999999999 455442 11 11111
Q ss_pred chhHHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCC
Q 021229 99 ESFQAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSG 150 (315)
Q Consensus 99 ~~~~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~ 150 (315)
..+ .....++++. +| .++|.|+|+|.||.++..++... +..++++|+.++.
T Consensus 173 l~D-~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 173 LLD-QRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (543)
T ss_dssp HHH-HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred HHH-HHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCC
Confidence 112 2222333333 33 36899999999999988877654 4578999988753
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.19 E-value=5.7e-06 Score=76.44 Aligned_cols=117 Identities=13% Similarity=0.071 Sum_probs=69.9
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhcc--ccceEEeecCC----CCCCCC-CCC--CCCCch
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMI--HYFNVYVPDLL----FFGDSF-TTR--PERSES 100 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~--~~~~vi~~D~~----G~G~S~-~~~--~~~~~~ 100 (315)
|...+++|.+.....+.|.||+|||.+ ++....+. ....|. .++-|+.+++| |++.+. ... .+....
T Consensus 91 dcl~lnv~~P~~~~~~~Pv~v~iHGGg~~~g~~~~~~~-~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~ 169 (529)
T 1p0i_A 91 DCLYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVY-DGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLF 169 (529)
T ss_dssp CCCEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGG-CTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHH
T ss_pred cCCeEEEeeCCCCCCCCeEEEEECCCccccCCCCcccc-ChHHHhccCCeEEEEecccccccccccCCCCCCCcCcccHH
Confidence 556788888643234467899999954 22211111 223343 35999999999 454441 111 111111
Q ss_pred hHHHHHHHHHHH----cCC--CceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 101 FQAECVMRVMEA----HSV--KKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 101 ~~a~~~~~~l~~----l~~--~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
++ ....++++. +|. ++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 170 D~-~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 170 DQ-QLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HH-HHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 22 222333333 343 5799999999999998888764 45688999887643
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.12 E-value=7.3e-06 Score=75.82 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=69.1
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCC---ChhhhHHhhHhhcc--ccceEEeecCC----CCCCCC-CCC--CCCCch
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGA---NALWQWTNIIPHMI--HYFNVYVPDLL----FFGDSF-TTR--PERSES 100 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~---~~~~~w~~~~~~l~--~~~~vi~~D~~----G~G~S~-~~~--~~~~~~ 100 (315)
|...+++|.+.....+.|.||+|||.+. +....+. ....|. .++-|+.+++| |++.+. ... .+....
T Consensus 93 dcl~lnv~~P~~~~~~~Pv~v~iHGG~~~~g~~~~~~~-~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~n~gl~ 171 (537)
T 1ea5_A 93 DCLYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVY-NGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLL 171 (537)
T ss_dssp CCCEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGG-CTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHH
T ss_pred cCCeEEEeccCCCCCCCeEEEEECCCcccCCCCCCCcc-ChHHHHhcCCEEEEEeccCccccccccCCCCCCCcCccccH
Confidence 5668888876432244578899999542 2211111 123343 45999999999 454431 111 111112
Q ss_pred hHHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 101 FQAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 101 ~~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
++ ....++++. +| .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 172 D~-~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 172 DQ-RMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HH-HHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 22 222233333 34 36899999999999998887753 34689999887643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=4.2e-07 Score=97.35 Aligned_cols=93 Identities=15% Similarity=0.222 Sum_probs=0.0
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC-CCceEEEEEchh
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS-VKKLSLVGLSYG 126 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSmG 126 (315)
.+++++|+|+.+++. +.|..+...+. ..|+.+.++|. .+..+....++...+.+.... ..++.|+|||||
T Consensus 2241 ~~~~Lfc~~~agG~~-~~y~~l~~~l~--~~v~~lq~pg~------~~~~~i~~la~~~~~~i~~~~p~gpy~L~G~S~G 2311 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSI-TVFHGLAAKLS--IPTYGLQCTGA------APLDSIQSLASYYIECIRQVQPEGPYRIAGYSYG 2311 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccH-HHHHHHHHhhC--CcEEEEecCCC------CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECHh
Confidence 356899999987766 35666666664 78888888761 122233334444444444443 357999999999
Q ss_pred HHHHHHHHHhhhh---hhc---eeEEeeC
Q 021229 127 GFVGYSMAAQFKE---KIE---KVVICCS 149 (315)
Q Consensus 127 G~ia~~~a~~~p~---~v~---~lil~~~ 149 (315)
|.+|+++|.+... .+. .++++++
T Consensus 2312 g~lA~evA~~L~~~G~~v~~~~~L~llDg 2340 (2512)
T 2vz8_A 2312 ACVAFEMCSQLQAQQSATPGNHSLFLFDG 2340 (2512)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHcCCCCCccceEEEEeC
Confidence 9999999987643 243 5667665
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=98.08 E-value=4.9e-05 Score=69.08 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=66.8
Q ss_pred CceEEEEEecCC----CCCCCcEEEEccCCCChhhhHHhhH-----------------hhccccceEEeecC-CCCCCCC
Q 021229 34 GSVMHCWVPKTR----NDSKPDLVLIHGLGANALWQWTNII-----------------PHMIHYFNVYVPDL-LFFGDSF 91 (315)
Q Consensus 34 g~~~~~~~~~~~----~~~~~~vvllHG~~~~~~~~w~~~~-----------------~~l~~~~~vi~~D~-~G~G~S~ 91 (315)
+..++||..... ..+.|.||+++|.++++.. |..+. ....+...++.+|. .|.|.|.
T Consensus 48 ~~~lfy~~~~~~~~~~~~~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy 126 (483)
T 1ac5_A 48 DLEYFFWKFTNNDSNGNVDRPLIIWLNGGPGCSSM-DGALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSV 126 (483)
T ss_dssp CCEEEEEEEECSCSGGGSSCCEEEEECCTTTBCTH-HHHHHSSSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCS
T ss_pred CceEEEEEEEecCCCCCcCCCEEEEECCCCchHhh-hhhHhhcCCeEecCCCceeecccchhhcCCeEEEecCCCccccC
Confidence 567888875432 2457888999998776653 43221 11233478999997 5999986
Q ss_pred CCCCC----------CCchhHHHHHHHHHHH-------cCCCceEEEEEchhHHHHHHHHHh
Q 021229 92 TTRPE----------RSESFQAECVMRVMEA-------HSVKKLSLVGLSYGGFVGYSMAAQ 136 (315)
Q Consensus 92 ~~~~~----------~~~~~~a~~~~~~l~~-------l~~~~v~lvGhSmGG~ia~~~a~~ 136 (315)
..... ......++++.++++. +...+++|.|+|+||..+-.+|..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~ 188 (483)
T 1ac5_A 127 EQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANA 188 (483)
T ss_dssp SCCSSGGGSCTTSSCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHH
T ss_pred CcCcccccccccccCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHH
Confidence 53221 1233446666666654 235689999999999988887764
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.3e-05 Score=74.27 Aligned_cols=117 Identities=15% Similarity=0.124 Sum_probs=69.7
Q ss_pred CCCceEEEEEecCC--CCCCCcEEEEccCCC---ChhhhHHhhHhhcc-ccceEEeecCC----CCCCCCCCC--CCCCc
Q 021229 32 QDGSVMHCWVPKTR--NDSKPDLVLIHGLGA---NALWQWTNIIPHMI-HYFNVYVPDLL----FFGDSFTTR--PERSE 99 (315)
Q Consensus 32 ~~g~~~~~~~~~~~--~~~~~~vvllHG~~~---~~~~~w~~~~~~l~-~~~~vi~~D~~----G~G~S~~~~--~~~~~ 99 (315)
.|...+++|.+... +.+.|.||+|||.+. +.. .|... .... .++-|+.+|+| |++.+.... .+...
T Consensus 96 edcl~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~-~~~~~-~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~~n~gl 173 (542)
T 2h7c_A 96 EDCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAAS-TYDGL-ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173 (542)
T ss_dssp SCCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCST-TSCCH-HHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHH
T ss_pred CCCcEEEEEECCCCCCCCCCCEEEEECCCcccCCCcc-ccCHH-HHHhcCCEEEEecCCCCccccCCCCCcccCccchhH
Confidence 35677888876422 234578899999542 221 12221 1222 46999999999 555443211 11111
Q ss_pred hhHHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 100 SFQAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 100 ~~~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
.+ .....++++. .+ .++|.|+|+|.||.++..++... +..++++|+.++..
T Consensus 174 ~D-~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 174 LD-QVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp HH-HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HH-HHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 12 1222333332 34 35899999999999998888763 55788998886543
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.05 E-value=8.9e-06 Score=75.49 Aligned_cols=116 Identities=15% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCceEEEEEe-----cCC-CCC----CCcEEEEccCCC---ChhhhHHhhHhhc-cccceEEeecCCC----CCCCCCCC
Q 021229 33 DGSVMHCWVP-----KTR-NDS----KPDLVLIHGLGA---NALWQWTNIIPHM-IHYFNVYVPDLLF----FGDSFTTR 94 (315)
Q Consensus 33 ~g~~~~~~~~-----~~~-~~~----~~~vvllHG~~~---~~~~~w~~~~~~l-~~~~~vi~~D~~G----~G~S~~~~ 94 (315)
|...+++|.+ ... .++ .|.||+|||.+. +....+ .....| ..++-|+.+|+|. +..+....
T Consensus 89 dcL~lnv~~P~~~~~~~~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~-~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~~~ 167 (551)
T 2fj0_A 89 ACIHANIHVPYYALPRDAADKNRFAGLPVLVFIHGGGFAFGSGDSDL-HGPEYLVSKDVIVITFNYRLNVYGFLSLNSTS 167 (551)
T ss_dssp CCCEEEEEEEGGGCCCC--------CEEEEEEECCSTTTSCCSCTTT-CBCTTGGGGSCEEEEECCCCHHHHHCCCSSSS
T ss_pred CCeEEEEEecCccccccccccCcCCCCCEEEEEcCCccccCCCcccc-cCHHHHHhCCeEEEEeCCcCCccccccCcccC
Confidence 4567888876 211 122 578899999432 221111 122233 3569999999993 33332111
Q ss_pred -C-CCCchhHHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeCC
Q 021229 95 -P-ERSESFQAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCSG 150 (315)
Q Consensus 95 -~-~~~~~~~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~~ 150 (315)
+ +....++. ...++++. ++ .++|.|+|+|.||.++..++.. .+..++++|+.++.
T Consensus 168 ~~~n~gl~D~~-~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 168 VPGNAGLRDMV-TLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp CCSCHHHHHHH-HHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred CCCchhHHHHH-HHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 1 11112222 22233333 33 4679999999999999888776 34578899988754
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00094 Score=58.66 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=30.8
Q ss_pred CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 114 SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 114 ~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+.++|.++|||+||..|+.+++..+ +|+.+|..+++.
T Consensus 217 D~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~ 253 (433)
T 4g4g_A 217 DTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGA 253 (433)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCT
T ss_pred ChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCC
Confidence 3478999999999999999999875 788888776543
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00057 Score=57.66 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=78.8
Q ss_pred eeecCCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHh---h--------c-------cccceEEeecCC-C
Q 021229 28 VTDLQDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIP---H--------M-------IHYFNVYVPDLL-F 86 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~---~--------l-------~~~~~vi~~D~~-G 86 (315)
+++++++..++||...+. ..+.|.||.+.|.++++.. +..+.+ . + .+...++.+|.| |
T Consensus 27 yv~v~~~~~lFywf~es~~~p~~~Pl~lWlnGGPGcSS~-~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~PvG 105 (300)
T 4az3_A 27 YLKGSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSSL-DGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG 105 (300)
T ss_dssp EEECSTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeecCCCCeEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCCc
Confidence 678888889999987543 3456788999998766542 432221 0 1 123689999988 8
Q ss_pred CCCCCCCCCC--CCchhHHHHHHHHHHH-------cCCCceEEEEEchhHHHHHHHHHhhhh----hhceeEEeeCC
Q 021229 87 FGDSFTTRPE--RSESFQAECVMRVMEA-------HSVKKLSLVGLSYGGFVGYSMAAQFKE----KIEKVVICCSG 150 (315)
Q Consensus 87 ~G~S~~~~~~--~~~~~~a~~~~~~l~~-------l~~~~v~lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~~ 150 (315)
-|.|...... ......+.++..+++. +...+++|.|-|.||..+-.+|...-+ .++++++-++.
T Consensus 106 tGfSy~~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 106 VGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp STTCEETTCCCCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred ccccccCCCcccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 8888644322 2333445565555542 235689999999999988888775422 35666655443
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.9e-05 Score=71.86 Aligned_cols=117 Identities=12% Similarity=0.073 Sum_probs=65.5
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCCChh--hhHH--hhHh-hcc--ccceEEeecCCC----CCCCCC----CCC
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGANAL--WQWT--NIIP-HMI--HYFNVYVPDLLF----FGDSFT----TRP 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~--~~w~--~~~~-~l~--~~~~vi~~D~~G----~G~S~~----~~~ 95 (315)
|...+++|.+... +.+.|.||+|||.+.... ..+. .++. .++ .++-|+.+|+|. +..+.. ...
T Consensus 104 dcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~ 183 (544)
T 1thg_A 104 DCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNT 183 (544)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCT
T ss_pred CCeEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccccCCC
Confidence 5567888886431 234578899999653211 1121 1222 122 248899999994 221110 011
Q ss_pred CCCchhHHHHHHHHHHH----cC--CCceEEEEEchhHHHHHHHHHhh--------hhhhceeEEeeCC
Q 021229 96 ERSESFQAECVMRVMEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--------KEKIEKVVICCSG 150 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--------p~~v~~lil~~~~ 150 (315)
+....++ ....++++. ++ .++|.|+|+|.||.++..++... +..++++|+.++.
T Consensus 184 n~gl~D~-~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 184 NAGLHDQ-RKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp THHHHHH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred chhHHHH-HHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 1111121 222233333 34 36899999999999988777653 4568889988753
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.76 E-value=4e-05 Score=70.65 Aligned_cols=117 Identities=14% Similarity=0.069 Sum_probs=66.3
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCCCh--hhhHHh--hHhhccccceEEeecCC----CCCCCCCC----CCCCC
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGANA--LWQWTN--IIPHMIHYFNVYVPDLL----FFGDSFTT----RPERS 98 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~--~~~w~~--~~~~l~~~~~vi~~D~~----G~G~S~~~----~~~~~ 98 (315)
|...+++|.+... +.+.|.||+|||.|... ...+.. +......++-|+.+|+| ||+.+... ..+..
T Consensus 84 dcl~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~~~n~g 163 (522)
T 1ukc_A 84 DCLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 163 (522)
T ss_dssp CCCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHH
T ss_pred cCCEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccCCCChh
Confidence 4567888886421 23457889999965321 011221 12222346999999999 55544311 01111
Q ss_pred chhHHHHHHHHHH----HcC--CCceEEEEEchhHHHHHHHHHhh----hhhhceeEEeeCC
Q 021229 99 ESFQAECVMRVME----AHS--VKKLSLVGLSYGGFVGYSMAAQF----KEKIEKVVICCSG 150 (315)
Q Consensus 99 ~~~~a~~~~~~l~----~l~--~~~v~lvGhSmGG~ia~~~a~~~----p~~v~~lil~~~~ 150 (315)
..++ ....++++ .+| .++|.|+|+|.||..+..++... +..+.++|+.++.
T Consensus 164 l~D~-~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~ 224 (522)
T 1ukc_A 164 LLDQ-RKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSF 224 (522)
T ss_dssp HHHH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCC
T ss_pred HHHH-HHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCC
Confidence 1121 22223333 334 35899999999998776665543 4568888887654
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00037 Score=62.01 Aligned_cols=121 Identities=16% Similarity=0.199 Sum_probs=76.4
Q ss_pred eeecC-CCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhH---h--------------hccccceEEeecCC-C
Q 021229 28 VTDLQ-DGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNII---P--------------HMIHYFNVYVPDLL-F 86 (315)
Q Consensus 28 ~~~~~-~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~---~--------------~l~~~~~vi~~D~~-G 86 (315)
+++++ .+..++||..... +.+.|.+|+++|.++++.. |..+. | ...+...++.+|.| |
T Consensus 20 Yv~v~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~~~~~~~l~~n~~sW~~~an~lfiDqPvG 98 (421)
T 1cpy_A 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSL-TGLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVN 98 (421)
T ss_dssp EEEETTTTEEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHTTTTSSEEEETTTEEEECTTCGGGGSEEECCCCSTT
T ss_pred EEEcCCCCcEEEEEEEEeCCCCCCCCEEEEECCCCchHhH-HHHHHccCCcEECCCCceeECCcccccccCEEEecCCCc
Confidence 66675 3678999876543 3457888999998766543 42211 1 12234789999965 8
Q ss_pred CCCCCCCCC-CCCchhHHHHHHHHHHH----c---CC--CceEEEEEchhHHHHHHHHHhhhh------hhceeEEeeC
Q 021229 87 FGDSFTTRP-ERSESFQAECVMRVMEA----H---SV--KKLSLVGLSYGGFVGYSMAAQFKE------KIEKVVICCS 149 (315)
Q Consensus 87 ~G~S~~~~~-~~~~~~~a~~~~~~l~~----l---~~--~~v~lvGhSmGG~ia~~~a~~~p~------~v~~lil~~~ 149 (315)
-|.|..... ..+....++++.++++. . .. .+++|.|.|+||..+-.+|...-+ .++++++-++
T Consensus 99 tGfSy~~~~~~~~~~~~a~~~~~fl~~~~~~~p~~~~~~~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg 177 (421)
T 1cpy_A 99 VGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNG 177 (421)
T ss_dssp STTCEESSCCCCSSHHHHHHHHHHHHHHHHHCTTSTTTTCCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESC
T ss_pred ccccCCCCCCCCChHHHHHHHHHHHHHHHHhCHHhcccCCCEEEEeecccccccHHHHHHHHhccccccceeeEEecCc
Confidence 998864332 22333445666555543 2 23 589999999999998888775422 3567655443
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=2.8e-05 Score=71.79 Aligned_cols=117 Identities=11% Similarity=0.039 Sum_probs=64.5
Q ss_pred CCceEEEEEecCC--CCCCCcEEEEccCCCCh--hhhHH--hhHh-hc--cccceEEeecCCC----CCCCCC----CCC
Q 021229 33 DGSVMHCWVPKTR--NDSKPDLVLIHGLGANA--LWQWT--NIIP-HM--IHYFNVYVPDLLF----FGDSFT----TRP 95 (315)
Q Consensus 33 ~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~--~~~w~--~~~~-~l--~~~~~vi~~D~~G----~G~S~~----~~~ 95 (315)
|...+++|.+... +.+.|.||+|||.|... ...+. .++. .+ ..++-|+.+|+|. +..+.. ...
T Consensus 96 dcl~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~~~ 175 (534)
T 1llf_A 96 DCLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175 (534)
T ss_dssp CCCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCT
T ss_pred CCeEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccCCC
Confidence 4567888876421 22457889999965321 11121 1222 12 2358999999993 221110 011
Q ss_pred CCCchhHHHHHHHHHH----HcC--CCceEEEEEchhHHHHHHHHHhh--------hhhhceeEEeeCC
Q 021229 96 ERSESFQAECVMRVME----AHS--VKKLSLVGLSYGGFVGYSMAAQF--------KEKIEKVVICCSG 150 (315)
Q Consensus 96 ~~~~~~~a~~~~~~l~----~l~--~~~v~lvGhSmGG~ia~~~a~~~--------p~~v~~lil~~~~ 150 (315)
+....+ .....+++. .+| .++|.|+|+|.||..+..++... +..++++|+.++.
T Consensus 176 n~gl~D-~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 176 NAGLKD-QRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp THHHHH-HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred chhHHH-HHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 111111 122233333 233 36899999999998777666553 4568889988753
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00039 Score=57.80 Aligned_cols=122 Identities=10% Similarity=0.173 Sum_probs=71.0
Q ss_pred eeecC--CCceEEEEEecC-C--CCCCCcEEEEccCCCChhhhH-HhhH---h--------h-------ccccceEEeec
Q 021229 28 VTDLQ--DGSVMHCWVPKT-R--NDSKPDLVLIHGLGANALWQW-TNII---P--------H-------MIHYFNVYVPD 83 (315)
Q Consensus 28 ~~~~~--~g~~~~~~~~~~-~--~~~~~~vvllHG~~~~~~~~w-~~~~---~--------~-------l~~~~~vi~~D 83 (315)
+++++ .|..++||.... . ..+.|.||+++|.++++.. | ..+. | . ..+...++.+|
T Consensus 28 yv~v~~~~~~~lFywf~es~~~~p~~~Pl~lWlnGGPGcSS~-~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiD 106 (270)
T 1gxs_A 28 YVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSI-GLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAE 106 (270)
T ss_dssp EEEEETTTTEEEEEEEECCCSSCGGGSCEEEEEECTTTBCTT-TTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEEC
T ss_pred EEEcCCCCCcEEEEEEEEecCCCCCCCCEEEEecCCCcccch-hhhhHHhccCceecCCCCcceeCccchhccccEEEEe
Confidence 56664 356899998654 2 2357888999998766653 3 2111 0 1 22347899999
Q ss_pred CC-CCCCCCCCCC-C--CCchhHHHHHHHHHHH-------cCCCceEEEEEchhHHHHHHHHHhh--h-----hhhceeE
Q 021229 84 LL-FFGDSFTTRP-E--RSESFQAECVMRVMEA-------HSVKKLSLVGLSYGGFVGYSMAAQF--K-----EKIEKVV 145 (315)
Q Consensus 84 ~~-G~G~S~~~~~-~--~~~~~~a~~~~~~l~~-------l~~~~v~lvGhSmGG~ia~~~a~~~--p-----~~v~~li 145 (315)
.| |-|.|..... . ......++++.++++. +...+++|.|.| |-.+........ . -.+++++
T Consensus 107 qPvGtGfSy~~~~~~~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~~~~inLkGi~ 185 (270)
T 1gxs_A 107 SPAGVGFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNNSPFINFQGLL 185 (270)
T ss_dssp CSTTSTTCEESSGGGGCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTTCTTCEEEEEE
T ss_pred ccccccccCCCCCccccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhccccccceeeeeEE
Confidence 65 9998864322 1 1223345555555543 344589999999 655543332221 1 1356777
Q ss_pred EeeCCC
Q 021229 146 ICCSGV 151 (315)
Q Consensus 146 l~~~~~ 151 (315)
+.++..
T Consensus 186 ign~~~ 191 (270)
T 1gxs_A 186 VSSGLT 191 (270)
T ss_dssp EESCCC
T ss_pred EeCCcc
Confidence 665544
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=8.3e-05 Score=69.46 Aligned_cols=101 Identities=14% Similarity=-0.031 Sum_probs=57.8
Q ss_pred CCCcEEEEccCCC---ChhhhHHhhHhhcc--ccceEEeecCC----CCCCCCC-------C--CCCCCchhHHHHHHHH
Q 021229 48 SKPDLVLIHGLGA---NALWQWTNIIPHMI--HYFNVYVPDLL----FFGDSFT-------T--RPERSESFQAECVMRV 109 (315)
Q Consensus 48 ~~~~vvllHG~~~---~~~~~w~~~~~~l~--~~~~vi~~D~~----G~G~S~~-------~--~~~~~~~~~a~~~~~~ 109 (315)
+.|.||+|||.+. +... +......|. .++-|+.+++| |++.... . ..+....+ .....++
T Consensus 140 ~~PV~v~iHGGg~~~g~~~~-~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D-~~~al~w 217 (585)
T 1dx4_A 140 GLPILIWIYGGGFMTGSATL-DIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWD-QALAIRW 217 (585)
T ss_dssp SEEEEEEECCSTTTCCCTTC-GGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHH-HHHHHHH
T ss_pred CCCEEEEECCCcccCCCCCC-CCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHH-HHHHHHH
Confidence 4578899999542 2211 111223343 35899999999 4443210 0 01111111 2223344
Q ss_pred HHH----cC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCC
Q 021229 110 MEA----HS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSG 150 (315)
Q Consensus 110 l~~----l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~ 150 (315)
++. +| .++|.|+|+|.||..+..++... ...++++|+.++.
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~ 266 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGT 266 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCC
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhccc
Confidence 443 33 35899999999999887777653 3468888888654
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00012 Score=55.68 Aligned_cols=61 Identities=23% Similarity=0.420 Sum_probs=54.1
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC-----------------------CCcEEEEEcCCCCccccCChHHHHHHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG-----------------------DNAQLIVIKKAGHAFNYEKPKEFYKHLKS 296 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~-----------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 296 (315)
.+++|+..|+.|-++|.-..+.+.+.+. .+.+++.+.+|||+++.++|+...+.+..
T Consensus 64 girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~~ 143 (153)
T 1whs_B 64 GLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQY 143 (153)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHHH
T ss_pred CceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHHH
Confidence 4799999999999999888888877763 25788999999999999999999999999
Q ss_pred HHhc
Q 021229 297 FLLD 300 (315)
Q Consensus 297 fl~~ 300 (315)
||..
T Consensus 144 fl~~ 147 (153)
T 1whs_B 144 FLQG 147 (153)
T ss_dssp HHHT
T ss_pred HHCC
Confidence 9984
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00016 Score=67.44 Aligned_cols=113 Identities=13% Similarity=0.095 Sum_probs=64.9
Q ss_pred CCceEEEEEecCC-----CCCCCcEEEEccCCCC---hhhhHHhhHhhccc--cceEEeecCC----CCCCCCCC-CC-C
Q 021229 33 DGSVMHCWVPKTR-----NDSKPDLVLIHGLGAN---ALWQWTNIIPHMIH--YFNVYVPDLL----FFGDSFTT-RP-E 96 (315)
Q Consensus 33 ~g~~~~~~~~~~~-----~~~~~~vvllHG~~~~---~~~~w~~~~~~l~~--~~~vi~~D~~----G~G~S~~~-~~-~ 96 (315)
|...+++|.+... +.+.|.||+|||.|.. .. .+.. ..|+. ++-|+.+|+| |+..+... .+ +
T Consensus 110 dcL~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~-~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~~~~~~n 186 (574)
T 3bix_A 110 DCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGN-LYDG--SVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGN 186 (574)
T ss_dssp CCCEEEEEEEC--------CCEEEEEECCCSSSSSCCGG-GSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSSSSCCCC
T ss_pred cCCEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCC-ccCc--hhhhccCCEEEEEeCCcCcccccCcCCCCCCCCc
Confidence 4567888876421 1235788999996432 22 1222 23332 4899999999 44333211 11 1
Q ss_pred CCchhHHHHHHHHHH----HcC--CCceEEEEEchhHHHHHHHHHhhh---hhhceeEEeeC
Q 021229 97 RSESFQAECVMRVME----AHS--VKKLSLVGLSYGGFVGYSMAAQFK---EKIEKVVICCS 149 (315)
Q Consensus 97 ~~~~~~a~~~~~~l~----~l~--~~~v~lvGhSmGG~ia~~~a~~~p---~~v~~lil~~~ 149 (315)
....++ ....+++. .+| .++|.|+|+|.||.++..++.... ..+.++|+.++
T Consensus 187 ~gl~D~-~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 187 YGLLDL-IQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred ccHHHH-HHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 111222 22223333 344 357999999999999988877654 34778888764
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00017 Score=67.09 Aligned_cols=116 Identities=17% Similarity=0.119 Sum_probs=65.3
Q ss_pred CCceEEEEEecCC---CCCCCcEEEEccCCCC---hhh-hH----HhhHhhcc--ccceEEeecCC----CCCCCCCC-C
Q 021229 33 DGSVMHCWVPKTR---NDSKPDLVLIHGLGAN---ALW-QW----TNIIPHMI--HYFNVYVPDLL----FFGDSFTT-R 94 (315)
Q Consensus 33 ~g~~~~~~~~~~~---~~~~~~vvllHG~~~~---~~~-~w----~~~~~~l~--~~~~vi~~D~~----G~G~S~~~-~ 94 (315)
|...+++|.+... +.+.|.||+|||.+.. ... .+ ......|+ .++-|+.+++| |++.+... .
T Consensus 79 dcl~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~ 158 (579)
T 2bce_A 79 DCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNL 158 (579)
T ss_dssp CCCEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTC
T ss_pred CCCEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCC
Confidence 5567888876422 2345788999996521 110 00 00112232 24889999999 55443211 1
Q ss_pred CCC-CchhHHHHHHHHHH----HcC--CCceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeC
Q 021229 95 PER-SESFQAECVMRVME----AHS--VKKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCS 149 (315)
Q Consensus 95 ~~~-~~~~~a~~~~~~l~----~l~--~~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~ 149 (315)
+.. ...++ ....++++ .+| .++|.|+|+|.||.++..++.. ....++++|+.++
T Consensus 159 pgn~gl~D~-~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg 221 (579)
T 2bce_A 159 PGNYGLWDQ-HMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSG 221 (579)
T ss_dssp CCCHHHHHH-HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESC
T ss_pred CCccchHHH-HHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcC
Confidence 111 12222 22223333 334 3589999999999998887765 2346888888764
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00038 Score=58.62 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=24.9
Q ss_pred HHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 108 ~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
++++.....++++.||||||.+|..++.....
T Consensus 129 ~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 160 (279)
T 1tia_A 129 EVVAQNPNYELVVVGHSLGAAVATLAATDLRG 160 (279)
T ss_pred HHHHHCCCCeEEEEecCHHHHHHHHHHHHHHh
Confidence 33333445689999999999999999998754
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0059 Score=55.35 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=54.0
Q ss_pred ceEEeecCCCCCCCCCCCC---------CCCchhHHHHHHHHHHHc----C--CCceEEEEEchhHHHHHHHHHhhhhhh
Q 021229 77 FNVYVPDLLFFGDSFTTRP---------ERSESFQAECVMRVMEAH----S--VKKLSLVGLSYGGFVGYSMAAQFKEKI 141 (315)
Q Consensus 77 ~~vi~~D~~G~G~S~~~~~---------~~~~~~~a~~~~~~l~~l----~--~~~v~lvGhSmGG~ia~~~a~~~p~~v 141 (315)
--+|....|-+|+|..... ..+......|++.+++++ + ..+++++|-|.||++|.-+-.++|+.|
T Consensus 74 a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv 153 (472)
T 4ebb_A 74 ALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLV 153 (472)
T ss_dssp CEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTC
T ss_pred CeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeE
Confidence 5789999999999964210 112222345566666544 3 257999999999999999999999999
Q ss_pred ceeEEeeCCC
Q 021229 142 EKVVICCSGV 151 (315)
Q Consensus 142 ~~lil~~~~~ 151 (315)
.+.+.-++++
T Consensus 154 ~ga~ASSApv 163 (472)
T 4ebb_A 154 AGALAASAPV 163 (472)
T ss_dssp SEEEEETCCT
T ss_pred EEEEecccce
Confidence 9887655443
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0011 Score=55.40 Aligned_cols=24 Identities=25% Similarity=0.343 Sum_probs=20.8
Q ss_pred CCCceEEEEEchhHHHHHHHHHhh
Q 021229 114 SVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 114 ~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
...++++.||||||.+|..++...
T Consensus 134 p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 134 PSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred CCceEEEEeeCHHHHHHHHHHHHH
Confidence 345699999999999999999877
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0011 Score=55.47 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=23.0
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
....++++.||||||.+|..++.....
T Consensus 135 ~~~~~i~l~GHSLGGalA~l~a~~l~~ 161 (269)
T 1tib_A 135 HPDYRVVFTGHSLGGALATVAGADLRG 161 (269)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHHTT
T ss_pred CCCceEEEecCChHHHHHHHHHHHHHh
Confidence 345689999999999999999998754
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.01 Score=51.43 Aligned_cols=34 Identities=26% Similarity=0.176 Sum_probs=29.2
Q ss_pred CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCC
Q 021229 116 KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG 150 (315)
Q Consensus 116 ~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~ 150 (315)
++|.++|||+||..|+.+++..+ +|+.+|..+++
T Consensus 185 ~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g 218 (375)
T 3pic_A 185 TKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESG 218 (375)
T ss_dssp EEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCC
T ss_pred hhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCC
Confidence 68999999999999999999876 78888876654
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0029 Score=48.15 Aligned_cols=62 Identities=21% Similarity=0.300 Sum_probs=51.1
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC----------------------------CCcEEEEEcCCCCccccCChHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG----------------------------DNAQLIVIKKAGHAFNYEKPKEFY 291 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~----------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 291 (315)
.+++|+..|+.|-+++.-..+.+.+.+. .+.+++.+.+|||+++.++|+.-.
T Consensus 63 girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al 142 (155)
T 4az3_B 63 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 142 (155)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHHH
T ss_pred CceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHHH
Confidence 5799999999999999877776655431 123578888999999999999999
Q ss_pred HHHHHHHhcC
Q 021229 292 KHLKSFLLDS 301 (315)
Q Consensus 292 ~~i~~fl~~~ 301 (315)
+.+.+||...
T Consensus 143 ~m~~~fl~g~ 152 (155)
T 4az3_B 143 TMFSRFLNKQ 152 (155)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999754
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0043 Score=50.98 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=57.2
Q ss_pred CCCcEEEEccCCCChh---hhHHhhHhhccccceEEeec-CCCCCCCCCCCCC-CCchhHHHH----HHHHHHHcCCCce
Q 021229 48 SKPDLVLIHGLGANAL---WQWTNIIPHMIHYFNVYVPD-LLFFGDSFTTRPE-RSESFQAEC----VMRVMEAHSVKKL 118 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~---~~w~~~~~~l~~~~~vi~~D-~~G~G~S~~~~~~-~~~~~~a~~----~~~~l~~l~~~~v 118 (315)
++|.|++.||-+.... -.-..+...+...+.+--.+ +|-.. .+. .+...-+.+ +.+........++
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~~~~~q~Vg~YpA~~-----~~y~~S~~~G~~~~~~~i~~~~~~CP~tki 76 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLDIYRWQPIGNYPAAA-----FPMWPSVEKGVAELILQIELKLDADPYADF 76 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTTTSEEEECCSCCCCS-----SSCHHHHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCcc-----cCccchHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 4688999999765311 01345566666555554443 44211 111 111112233 3333344456899
Q ss_pred EEEEEchhHHHHHHHHHhh-----------hhhhceeEEeeCC
Q 021229 119 SLVGLSYGGFVGYSMAAQF-----------KEKIEKVVICCSG 150 (315)
Q Consensus 119 ~lvGhSmGG~ia~~~a~~~-----------p~~v~~lil~~~~ 150 (315)
+|+|+|.|+.++-.++... .++|.+++++..+
T Consensus 77 VL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 77 AMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp EEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred EEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 9999999999998887652 3578888888543
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0022 Score=53.60 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=24.4
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
.++++.....++.+.||||||.+|..++...
T Consensus 128 ~~~~~~~~~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 128 QEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp HHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCeEEEeccChHHHHHHHHHHHH
Confidence 3334444456899999999999999999877
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0034 Score=52.19 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=25.3
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+.++++.....++.+.||||||.+|..++....
T Consensus 115 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~ 147 (261)
T 1uwc_A 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLS 147 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCceEEEEecCHHHHHHHHHHHHHh
Confidence 334444445578999999999999999988764
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0047 Score=51.20 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=26.0
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
+.++++.....++++.|||+||.+|..++.....
T Consensus 114 l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 147 (258)
T 3g7n_A 114 VKALIAKYPDYTLEAVGHSLGGALTSIAHVALAQ 147 (258)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeccCHHHHHHHHHHHHHHH
Confidence 4444455556789999999999999998887543
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.011 Score=45.08 Aligned_cols=61 Identities=21% Similarity=0.408 Sum_probs=50.8
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC--------------------------CCcEEEEEcCCCCccccCChHHHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG--------------------------DNAQLIVIKKAGHAFNYEKPKEFYKH 293 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~--------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~ 293 (315)
.+++|+..|+.|-+++.-..+.+.+.+. .+.+++.+.+|||+++.++|+...+.
T Consensus 66 girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~m 145 (158)
T 1gxs_B 66 GLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFLL 145 (158)
T ss_dssp TCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHHH
T ss_pred CCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHHH
Confidence 5799999999999999877776665541 12457789999999999999999999
Q ss_pred HHHHHhc
Q 021229 294 LKSFLLD 300 (315)
Q Consensus 294 i~~fl~~ 300 (315)
+..||..
T Consensus 146 ~~~fl~g 152 (158)
T 1gxs_B 146 FKQFLKG 152 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9999984
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0071 Score=50.73 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=26.3
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
+.++++.....++.+.|||+||.+|..+|.....
T Consensus 128 l~~~~~~~p~~~l~vtGHSLGGalA~l~a~~l~~ 161 (279)
T 3uue_A 128 VKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIEL 161 (279)
T ss_dssp HHHHHHHHTCCCEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEcccCHHHHHHHHHHHHHHH
Confidence 4444455566789999999999999999887644
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0073 Score=51.24 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
.+.++++.....++++.|||+||.+|..+|.....
T Consensus 143 ~l~~~~~~~p~~~i~vtGHSLGGalA~l~a~~l~~ 177 (301)
T 3o0d_A 143 KLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKV 177 (301)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEeccChHHHHHHHHHHHHHh
Confidence 34445555556789999999999999999887654
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0066 Score=51.85 Aligned_cols=26 Identities=31% Similarity=0.359 Sum_probs=21.9
Q ss_pred cCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 113 HSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 113 l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
....++++.||||||.+|..++....
T Consensus 133 ~p~~~i~vtGHSLGGAlA~L~a~~l~ 158 (319)
T 3ngm_A 133 NPSFKVVSVGHSLGGAVATLAGANLR 158 (319)
T ss_dssp STTCEEEEEEETHHHHHHHHHHHHHH
T ss_pred CCCCceEEeecCHHHHHHHHHHHHHH
Confidence 34568999999999999999888754
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.025 Score=51.33 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=50.9
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC------------------------------------CCcEEEEEcCCCCccc
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG------------------------------------DNAQLIVIKKAGHAFN 283 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~------------------------------------~~~~~~~i~~~gH~~~ 283 (315)
.+++||..|+.|-+|+.-..+.+.+.+. .+.+++.+.+|||+++
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 5899999999999999877666544331 1246788999999999
Q ss_pred cCChHHHHHHHHHHHhcC
Q 021229 284 YEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~~ 301 (315)
.++|+...+.+..||...
T Consensus 452 ~dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred chhHHHHHHHHHHHHCCc
Confidence 999999999999999754
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=94.59 E-value=0.088 Score=46.76 Aligned_cols=62 Identities=15% Similarity=0.274 Sum_probs=50.9
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC------------------------------CCcEEEEEcCCCCccccCChHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG------------------------------DNAQLIVIKKAGHAFNYEKPKE 289 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~------------------------------~~~~~~~i~~~gH~~~~e~p~~ 289 (315)
.+++||..|+.|-+++.-..+.+.+.+. .+.+++.+.+|||+++.++|+.
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 4899999999999999876666654431 1245778999999999999999
Q ss_pred HHHHHHHHHhcC
Q 021229 290 FYKHLKSFLLDS 301 (315)
Q Consensus 290 ~~~~i~~fl~~~ 301 (315)
..+.+.+||...
T Consensus 407 al~m~~~fl~g~ 418 (421)
T 1cpy_A 407 ALSMVNEWIHGG 418 (421)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhcCc
Confidence 999999999754
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=94.58 E-value=0.082 Score=41.52 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh----hhhceeEEeeCC
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK----EKIEKVVICCSG 150 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p----~~v~~lil~~~~ 150 (315)
...+..........+++|+|+|.|+.++-..+...| ++|.+++|+..+
T Consensus 84 ~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 135 (197)
T 3qpa_A 84 LGLFQQANTKCPDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYT 135 (197)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHHhCCCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCC
Confidence 344444445556789999999999999988777655 578888888544
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=94.09 E-value=0.099 Score=46.94 Aligned_cols=61 Identities=21% Similarity=0.304 Sum_probs=51.0
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC----------------------------CCcEEEEEcCCCCccccCChHHHH
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG----------------------------DNAQLIVIKKAGHAFNYEKPKEFY 291 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~----------------------------~~~~~~~i~~~gH~~~~e~p~~~~ 291 (315)
.+++||..|+.|-+|+.-..+.+.+.+. .+.+++.+.+|||+++.++|+...
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 5899999999999999877777665442 123567889999999999999999
Q ss_pred HHHHHHHhc
Q 021229 292 KHLKSFLLD 300 (315)
Q Consensus 292 ~~i~~fl~~ 300 (315)
+.+..||..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999999974
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=93.84 E-value=0.05 Score=47.01 Aligned_cols=25 Identities=28% Similarity=0.434 Sum_probs=21.4
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhh
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
..++++.|||+||.+|..+|.....
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~l~~ 189 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALWLKD 189 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHHHHH
Confidence 4689999999999999999887543
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.12 Score=40.72 Aligned_cols=48 Identities=15% Similarity=0.032 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh----hhhceeEEeeCC
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK----EKIEKVVICCSG 150 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p----~~v~~lil~~~~ 150 (315)
...+..........+++|+|.|.|+.++-.++...| ++|.+++++..+
T Consensus 92 ~~~i~~~~~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 143 (201)
T 3dcn_A 92 RRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYT 143 (201)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCT
T ss_pred HHHHHHHHHhCCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCc
Confidence 344445555556789999999999999988776544 578888887543
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.16 Score=40.40 Aligned_cols=45 Identities=18% Similarity=0.187 Sum_probs=31.0
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHh--------------hh----hhhceeEEeeCC
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQ--------------FK----EKIEKVVICCSG 150 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~--------------~p----~~v~~lil~~~~ 150 (315)
+.+........|++|+|+|.|+.++-.+... .| ++|.+++++..+
T Consensus 72 i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~~~~~~~~i~~~~~~l~~~~~~~V~avvlfGdP 134 (207)
T 1g66_A 72 VNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHSTTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHhCCCCcEEEEeeCchHHHHHHHHhcccccccccccCCCCCChhhhccEEEEEEEcCC
Confidence 3333344456899999999999999887641 22 567777777543
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.24 Score=39.19 Aligned_cols=45 Identities=16% Similarity=0.120 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhh--h----hhhceeEEeeCC
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF--K----EKIEKVVICCSG 150 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~--p----~~v~~lil~~~~ 150 (315)
+..........+++|+|.|.|+.++-.++... | ++|.+++|+..+
T Consensus 67 i~~~~~~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGdP 117 (205)
T 2czq_A 67 INSGLAANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGNP 117 (205)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESCT
T ss_pred HHHHHhhCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeCC
Confidence 33334444578999999999999988877655 3 578888888644
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=93.06 E-value=0.2 Score=39.75 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=22.7
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
+.+........|++|+|+|.|+.++-.++.
T Consensus 72 i~~~~~~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 72 INNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHhhCCCCcEEEEEeCchHHHHHHHHh
Confidence 334444445789999999999999988764
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=92.84 E-value=0.21 Score=38.85 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=33.2
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhh----hhhceeEEeeCC
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK----EKIEKVVICCSG 150 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p----~~v~~lil~~~~ 150 (315)
..........+++|+|.|.|+.++-.++...| ++|.+++++..+
T Consensus 84 ~~~~~~CP~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP 131 (187)
T 3qpd_A 84 EQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYT 131 (187)
T ss_dssp HHHHHHCTTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCT
T ss_pred HHHHHhCCCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCC
Confidence 33445556789999999999999988776554 578888887543
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.12 E-value=0.03 Score=49.33 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=23.7
Q ss_pred HHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+.++++.... .++++.|||+||.+|..+|....
T Consensus 216 l~~ll~~yp~~~~~I~vTGHSLGGALA~L~A~~L~ 250 (419)
T 2yij_A 216 VGRLLEKYKDEEVSITICGHSLGAALATLSATDIV 250 (419)
Confidence 4444444432 46999999999999998887653
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=91.16 E-value=0.55 Score=39.54 Aligned_cols=45 Identities=13% Similarity=0.321 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhh--------hhhhceeEEeeCC
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF--------KEKIEKVVICCSG 150 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~--------p~~v~~lil~~~~ 150 (315)
+.+.....-..|++|+|+|-|+.|+-.++... +++|.+++|+..+
T Consensus 123 i~~~~~~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGdP 175 (302)
T 3aja_A 123 MTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADG 175 (302)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESCT
T ss_pred HHHHHhhCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeCC
Confidence 33444444568999999999999998877542 4678888888644
|
| >4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A | Back alignment and structure |
|---|
Probab=84.67 E-value=1.5 Score=38.64 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=25.4
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
+.++++..|+++-.++|||+|=..|+..|.
T Consensus 158 l~~ll~~~Gv~P~~v~GHS~GE~aAa~~AG 187 (401)
T 4amm_A 158 GIRWLDRLGARPVGALGHSLGELAALSWAG 187 (401)
T ss_dssp HHHHHHHHTCCCSEEEECTTHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCEEEECCHHHHHHHHHhC
Confidence 557778899999999999999988887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 315 | ||||
| d1uk8a_ | 271 | c.69.1.10 (A:) Meta-cleavage product hydrolase Cum | 1e-22 | |
| d1bn7a_ | 291 | c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus | 2e-22 | |
| d1a8sa_ | 273 | c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas flu | 5e-22 | |
| d2rhwa1 | 283 | c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2 | 7e-22 | |
| d1va4a_ | 271 | c.69.1.12 (A:) Arylesterase {Pseudomonas fluoresce | 8e-22 | |
| d3c70a1 | 256 | c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber t | 1e-21 | |
| d1j1ia_ | 268 | c.69.1.10 (A:) Meta cleavage compound hydrolase Ca | 3e-21 | |
| d1q0ra_ | 297 | c.69.1.28 (A:) Aclacinomycin methylesterase RdmC { | 6e-21 | |
| d1xkla_ | 258 | c.69.1.20 (A:) Salicylic acid-binding protein 2 (S | 3e-20 | |
| d1m33a_ | 256 | c.69.1.26 (A:) Biotin biosynthesis protein BioH {E | 1e-19 | |
| d1pjaa_ | 268 | c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {H | 3e-19 | |
| d1k8qa_ | 377 | c.69.1.6 (A:) Gastric lipase {Dog (Canis familiari | 2e-18 | |
| d1c4xa_ | 281 | c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-di | 2e-18 | |
| d1zd3a2 | 322 | c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, | 5e-18 | |
| d1hkha_ | 279 | c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. | 8e-18 | |
| d1brta_ | 277 | c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces au | 8e-18 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 9e-18 | |
| d1b6ga_ | 310 | c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacte | 2e-17 | |
| d1azwa_ | 313 | c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas | 4e-17 | |
| d1a88a_ | 275 | c.69.1.12 (A:) Chloroperoxidase L {Streptomyces li | 5e-17 | |
| d1wm1a_ | 313 | c.69.1.7 (A:) Proline aminopeptidase {Serratia mar | 8e-17 | |
| d1mj5a_ | 298 | c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomona | 1e-16 | |
| d1a8qa_ | 274 | c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces au | 2e-16 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 8e-16 | |
| d1ehya_ | 293 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Agroba | 8e-16 | |
| d1mtza_ | 290 | c.69.1.7 (A:) Tricorn interacting factor F1 {Archa | 3e-15 | |
| d1ex9a_ | 285 | c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [Tax | 4e-13 | |
| d1qlwa_ | 318 | c.69.1.15 (A:) A novel bacterial esterase {Alcalig | 4e-12 | |
| d1cvla_ | 319 | c.69.1.18 (A:) Lipase {Chromobacterium viscosum [T | 5e-12 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 9e-12 | |
| d1tcaa_ | 317 | c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Cand | 3e-11 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 5e-11 | |
| d1tqha_ | 242 | c.69.1.29 (A:) Carboxylesterase Est {Bacillus stea | 3e-10 | |
| d1qo7a_ | 394 | c.69.1.11 (A:) Bacterial epoxide hydrolase {Asperg | 3e-10 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 3e-08 | |
| d1mo2a_ | 255 | c.69.1.22 (A:) Erythromycin polyketide synthase {S | 4e-08 | |
| d1xkta_ | 286 | c.69.1.22 (A:) Fatty acid synthase {Human (Homo sa | 6e-08 | |
| d2h7xa1 | 283 | c.69.1.22 (A:9-291) Picromycin polyketide synthase | 6e-08 | |
| d1imja_ | 208 | c.69.1.23 (A:) Ccg1/TafII250-interacting factor B | 3e-07 | |
| d1jmkc_ | 230 | c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillu | 1e-06 | |
| d2dsta1 | 122 | c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 | 1e-05 | |
| d1lnsa3 | 405 | c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopep | 2e-05 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 3e-05 | |
| d2vata1 | 376 | c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalospor | 5e-05 | |
| d2pl5a1 | 362 | c.69.1.40 (A:5-366) Homoserine O-acetyltransferase | 1e-04 | |
| d1ispa_ | 179 | c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: | 2e-04 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 5e-04 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 0.002 |
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Score = 93.0 bits (229), Expect = 1e-22
Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 10/255 (3%)
Query: 50 PDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
++LIHG G W IP + ++ V PD++ FG + +
Sbjct: 24 QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHI 83
Query: 108 RV-MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
M+A ++K +VG ++GG + + A ++ E+++++V+ + +
Sbjct: 84 IGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAV--- 140
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA 226
I ++ + R + + + ++ + + E ++ + A
Sbjct: 141 -WGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDA 199
Query: 227 IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEK 286
+ + +I + TLI+ G DQ+ PL RL + D AQL V + GH E+
Sbjct: 200 LASSDE--DIKTLPNETLIIHGREDQVVPLSSSLRLGELI-DRAQLHVFGRCGHWTQIEQ 256
Query: 287 PKEFYKHLKSFLLDS 301
F + + F ++
Sbjct: 257 TDRFNRLVVEFFNEA 271
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Score = 93.0 bits (229), Expect = 2e-22
Identities = 43/277 (15%), Positives = 86/277 (31%), Gaps = 15/277 (5%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
G MH ++ +HG ++ + W NIIPH+ PDL+ G S
Sbjct: 15 LGERMHYVD--VGPRDGTPVLFLHGNPTSS-YLWRNIIPHVAPSHRCIAPDLIGMGKSDK 71
Query: 93 TRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152
+ + +EA ++++ LV +G +G+ A + E+++ +
Sbjct: 72 PDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP 131
Query: 153 LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212
+ D + + + + + + K L + +
Sbjct: 132 IPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFL 191
Query: 213 CTEYLEEKRELVRAIPKD-----------RKISNIDKITQPTLILWGEHDQIFPLELGRR 261
E IP ++ + + P L+ WG + P R
Sbjct: 192 KPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAAR 251
Query: 262 LKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
L L N + + I H + P + +L
Sbjct: 252 LAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWL 287
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Score = 91.5 bits (225), Expect = 5e-22
Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 5/255 (1%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
S +V HG NA W + + + + V D G S A+ +
Sbjct: 18 SGQPIVFSHGWPLNA-DSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDL 76
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVG--YSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
+++E ++ L G S GG Y + +I + + +
Sbjct: 77 AQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLP 136
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFK-RPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
+ + + + K+L FF P + + ++ + + +
Sbjct: 137 MEVFDGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDC 196
Query: 224 VRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283
++A + ++ KI PTL++ G+ DQ+ P+E + L + L + A H
Sbjct: 197 IKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLT 256
Query: 284 YEKPKEFYKHLKSFL 298
+ L +F+
Sbjct: 257 DTHKDQLNADLLAFI 271
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Score = 91.0 bits (224), Expect = 7e-22
Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 7/253 (2%)
Query: 50 PDLVLIHGLGANALW---QWTNIIPHMIHYFNVYVPDLL-FFGDSFTTRPERSESFQAEC 105
++++HG G A + N+ P + + V + D F E+ A
Sbjct: 31 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA 90
Query: 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
V +M+A + + LVG + GG + A ++ ++I K+++ G M +
Sbjct: 91 VKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGI 150
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
L + ++ ++ ++ Y L +L ++
Sbjct: 151 KLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPL 210
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285
+ + +I T I WG D+ PL+ G +L ++ D+A+L V K GH +E
Sbjct: 211 STWDVTA--RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNI-DDARLHVFSKCGHWAQWE 267
Query: 286 KPKEFYKHLKSFL 298
EF + + FL
Sbjct: 268 HADEFNRLVIDFL 280
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 90.7 bits (223), Expect = 8e-22
Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 3/253 (1%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
S ++ HG +A W + ++ + D FG S A+ +
Sbjct: 18 SGKPVLFSHGWLLDA-DMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDI 76
Query: 107 MRVMEAHSVKKLSLV-GLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV 165
+++E +K+++LV GG V +A ++ +V+ + L Q
Sbjct: 77 AQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVP 136
Query: 166 SDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR 225
D+ K + + + F+ +V + + + L+ + V
Sbjct: 137 LDVFARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVT 196
Query: 226 AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285
A + ++ KI PTL++ G+ DQI P E ++ + L A+L V K A H F
Sbjct: 197 AFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAVT 256
Query: 286 KPKEFYKHLKSFL 298
++ + L +FL
Sbjct: 257 HAQQLNEDLLAFL 269
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Score = 89.9 bits (221), Expect = 1e-21
Identities = 43/249 (17%), Positives = 78/249 (31%), Gaps = 5/249 (2%)
Query: 53 VLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERS--ESFQAECVMRV 109
VLIH + A W W + P + V DL G E + + + +
Sbjct: 6 VLIHTICHGA-WIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFL 64
Query: 110 MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLE 169
+K+ LVG S GG A ++ EKI V S + E + K+ ++
Sbjct: 65 EALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF 124
Query: 170 EASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPK 229
K + K + + L L + + + K
Sbjct: 125 PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAK 184
Query: 230 DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE 289
+ + + +W + D+IF E + ++ ++ H K KE
Sbjct: 185 RPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK-PDKVYKVEGGDHKLQLTKTKE 243
Query: 290 FYKHLKSFL 298
+ L+
Sbjct: 244 IAEILQEVA 252
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Score = 89.1 bits (219), Expect = 3e-21
Identities = 51/254 (20%), Positives = 94/254 (37%), Gaps = 12/254 (4%)
Query: 48 SKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAEC 105
++LIHG GA A W N+IP + ++ V D+L FG + E ++ +
Sbjct: 21 KGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRRIRH 80
Query: 106 VMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
+ ++A + +VG S GG G ++ E + +V+ S + E R
Sbjct: 81 LHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPII 140
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
D + + ++ + Y+ M +
Sbjct: 141 NYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYD 200
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284
I K+ PTL++ G+ D++ P+E + + D++ +I GH
Sbjct: 201 P--------EFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLI-DDSWGYIIPHCGHWAMI 251
Query: 285 EKPKEFYKHLKSFL 298
E P++F SFL
Sbjct: 252 EHPEDFANATLSFL 265
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Score = 88.8 bits (218), Expect = 6e-21
Identities = 44/276 (15%), Positives = 92/276 (33%), Gaps = 24/276 (8%)
Query: 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPER---SESF 101
+ + P L+L+ G +AL + +V D G S T
Sbjct: 19 DPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78
Query: 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD---- 157
A + V++ V + +VGLS G + +A +++ + + G + D
Sbjct: 79 LAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIE 138
Query: 158 ---------------LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202
+ + ++ + + ++ + ++ + + P +
Sbjct: 139 RVMRGEPTLDGLPGPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYA 198
Query: 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRL 262
ID E +P + + + ++T PTL++ EHD I P G+ L
Sbjct: 199 RWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREVTVPTLVIQAEHDPIAPAPHGKHL 258
Query: 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ A+L I GHA + + +
Sbjct: 259 AGLI-PTARLAEIPGMGHALPSSVHGPLAEVILAHT 293
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Score = 86.1 bits (211), Expect = 3e-20
Identities = 46/254 (18%), Positives = 86/254 (33%), Gaps = 7/254 (2%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERS--ESFQAECV 106
VL+HG W W + P + V DL G E + +
Sbjct: 3 KHFVLVHGACHGG-WSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLM 61
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
+ + +K+ LVG S GG ++ +KI V + + + + + +
Sbjct: 62 ELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYN 121
Query: 167 DLEEASKILVPQSP--GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
+ A L Q G +E + FF L+ L S A+ + + +
Sbjct: 122 ERTPAENWLDTQFLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFM 181
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNY 284
+ K + ++ + + + D+ P E R ++G + I IK A H
Sbjct: 182 EDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIG-VTEAIEIKGADHMAML 240
Query: 285 EKPKEFYKHLKSFL 298
+P++ L
Sbjct: 241 CEPQKLCASLLEIA 254
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Score = 84.5 bits (207), Expect = 1e-19
Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 9/256 (3%)
Query: 43 KTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102
+T+ LVL+HG G NA W I + +F +++ DL FG S
Sbjct: 5 QTKGQGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMA 63
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162
+ + + S GG V +A E++ +V S C +D
Sbjct: 64 EAVLQQAPDKAIWLGWS-----LGGLVASQIALTHPERVRALVTVASSPCFSARD-EWPG 117
Query: 163 FKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE 222
K L + L ++ + L + E
Sbjct: 118 IKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGG 177
Query: 223 LVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAF 282
L D + + ++ P L L+G D + P ++ L +++ + KA HA
Sbjct: 178 LEILKTVDLRQ-PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-HSESYIFAKAAHAP 235
Query: 283 NYEKPKEFYKHLKSFL 298
P EF L +
Sbjct: 236 FISHPAEFCHLLVALK 251
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.6 bits (205), Expect = 3e-19
Identities = 27/274 (9%), Positives = 74/274 (27%), Gaps = 30/274 (10%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHM---IHYFNVYVPDLLFFGDSFTTRPERSESFQAE 104
S ++++HGL ++ + + +++ ++ V V DL +S E+ + F+
Sbjct: 1 SYKPVIVVHGLFDSS-YSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREA 59
Query: 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC------------ 152
V + + + + L+ S GG V ++ + + I S
Sbjct: 60 VVPIMA--KAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKW 117
Query: 153 LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212
L +R ++++ + + Y + +
Sbjct: 118 LFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWR 177
Query: 213 CTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL------ 266
L+ I + ++ + +E
Sbjct: 178 KNFLRVGHLVLIGGPDDGV----ITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTL 233
Query: 267 --GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ H + + ++ +L
Sbjct: 234 LARGAIVRCPMAGISHTAWHSNRTLYETCIEPWL 267
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} Length = 377 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Score = 82.8 bits (203), Expect = 2e-18
Identities = 39/343 (11%), Positives = 94/343 (27%), Gaps = 79/343 (23%)
Query: 32 QDGSVMHCW-VPKTRNDS-----KPDLVLIHGLGANALWQWTNIIPHMI-------HYFN 78
+DG ++ +P R +S +P L HGL A+A W + +P+ ++
Sbjct: 35 EDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA-TNWISNLPNNSLAFILADAGYD 93
Query: 79 VYVPDLLFFG--------------DSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLS 124
V++ + + E ++ + +++ KL VG S
Sbjct: 94 VWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHS 153
Query: 125 YGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLK 184
G +G+ + + +++ + + ++ ++ L L G
Sbjct: 154 QGTTIGFIAFSTNPKLAKRIKTFYALAPVA--TVKYTETLINKLMLVPSFLFKLIFGNKI 211
Query: 185 ELMRYTFFKRPPLSLVPSCLLSDYIDAMC------------------------------- 213
+ F + + +
Sbjct: 212 FYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQN 271
Query: 214 ---------------TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258
++ + ++ N+ + P + G +D +
Sbjct: 272 VLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHD 331
Query: 259 GRRLKSHLGDNAQLIVIKKAGHA---FNYEKPKEFYKHLKSFL 298
L S L + I H + + P+ Y + S +
Sbjct: 332 VDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM 374
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Score = 81.5 bits (199), Expect = 2e-18
Identities = 48/271 (17%), Positives = 84/271 (30%), Gaps = 8/271 (2%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLL-FFGD 89
H V + P +VL+HG G A W IIP + F V PDL+ F
Sbjct: 12 GTLASHALV--AGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQS 69
Query: 90 SFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149
+ + + G +G ++ Q + + +
Sbjct: 70 EYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVA 129
Query: 150 GVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYI 209
+ + R +++ L +L Y P + +
Sbjct: 130 LMGSVGAPMNARPPELARLLAFYADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVAN 189
Query: 210 DAMCTEYLEEKRELVRAIPKDRKISNID--KITQPTLILWGEHDQIFPLELGRRLKSHLG 267
D E E ++A + I ++ L+ G D+I PL+ L HL
Sbjct: 190 DPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHL- 248
Query: 268 DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+A+L+V+ + GH E+ L
Sbjct: 249 KHAELVVLDRCGHWAQLERWDAMGPMLMEHF 279
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.1 bits (198), Expect = 5e-18
Identities = 47/313 (15%), Positives = 96/313 (30%), Gaps = 43/313 (13%)
Query: 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYV 81
++ +H S P + L HG + + W IP + + V
Sbjct: 10 DMSHGYVTVKPRVRLHFV----ELGSGPAVCLCHGFPESW-YSWRYQIPALAQAGYRVLA 64
Query: 82 PDLLFFGDSFTTRPERSESFQAECVMRVM--EAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139
D+ +G+S + C V + + + +G +GG + + MA + E
Sbjct: 65 MDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPE 124
Query: 140 KIEKVVICCSGVCLEEQDLR--DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPL 197
++ V + ++ + + + P E FK
Sbjct: 125 RVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFR 184
Query: 198 SLVPSCLLSDYIDAMCTEYL--------------EEKRELVRAIPK-------------- 229
+ S L + ++ EE + V+ K
Sbjct: 185 ASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNME 244
Query: 230 ----DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285
S KI P L++ E D + ++ + ++ + + + I+ GH +
Sbjct: 245 RNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMD 303
Query: 286 KPKEFYKHLKSFL 298
KP E + L +L
Sbjct: 304 KPTEVNQILIKWL 316
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} Length = 279 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Score = 79.6 bits (194), Expect = 8e-18
Identities = 44/257 (17%), Positives = 77/257 (29%), Gaps = 7/257 (2%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
S +VLIHG + W ++ + V D FG S A +
Sbjct: 22 SGQPVVLIHGYPLDG-HSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADL 80
Query: 107 MRVMEAHSVKKLSLVG--LSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
V+E ++ + LVG + G Y + + + L ++D
Sbjct: 81 HTVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVP 140
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
+ + + + L S + V
Sbjct: 141 QEVFDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAV 200
Query: 225 RAIPKDRKISNID---KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281
+ S+++ +PTLIL G D I P++ R A + ++ A H
Sbjct: 201 VPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVPEADYVEVEGAPHG 260
Query: 282 FNYEKPKEFYKHLKSFL 298
+ E LK+FL
Sbjct: 261 LLWTHADEVNAALKTFL 277
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 79.6 bits (194), Expect = 8e-18
Identities = 43/255 (16%), Positives = 80/255 (31%), Gaps = 5/255 (1%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
+ +VLIHG + W ++ + V D FG S A +
Sbjct: 22 TGQPVVLIHGFPLSG-HSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADL 80
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166
V+E ++ LVG S G + + V + + D +
Sbjct: 81 NTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAA 140
Query: 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA 226
E I+ + + + + + + + A
Sbjct: 141 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAA 200
Query: 227 IPKDRKI---SNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283
P ++I +I P LIL G D+ P+E R+ +A+ + ++ A H
Sbjct: 201 APTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPSAEYVEVEGAPHGLL 260
Query: 284 YEKPKEFYKHLKSFL 298
+ +E L +FL
Sbjct: 261 WTHAEEVNTALLAFL 275
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 79.2 bits (193), Expect = 9e-18
Identities = 39/255 (15%), Positives = 73/255 (28%), Gaps = 10/255 (3%)
Query: 46 NDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESF-QA 103
P +VL+HGL + W ++ H+ DL G + + +
Sbjct: 13 TARTPLVVLVHGLLGSG-ADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEM 71
Query: 104 ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163
S + LVG S GG + AQ + +
Sbjct: 72 IEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKA 131
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
++ Q P + Y L+ L A +
Sbjct: 132 ARWQHDQQWAQRFSQQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLA 191
Query: 224 VRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFN 283
+ + + + P + GE D F +L + +AGH +
Sbjct: 192 TSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-QLAESS------GLSYSQVAQAGHNVH 244
Query: 284 YEKPKEFYKHLKSFL 298
+E+P+ F K +++ +
Sbjct: 245 HEQPQAFAKIVQAMI 259
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Score = 78.8 bits (192), Expect = 2e-17
Identities = 40/264 (15%), Positives = 89/264 (33%), Gaps = 13/264 (4%)
Query: 47 DSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
D++ + +HG + I V PD FG S E +F+
Sbjct: 45 DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRN 104
Query: 107 MRV--MEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164
+ +E ++ ++LV +GGF+G ++ + ++++I + + +
Sbjct: 105 FLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAF 164
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
V+ + +L F KR +L + + T Y R+
Sbjct: 165 VTQPADGFTAWKYDLVTP-SDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFP 223
Query: 225 RAIPKDRKISN----------IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIV 274
+ + + + + T + G D++ ++ +K+ + + +
Sbjct: 224 KMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMKDKLLGPDVMYPMKALINGCPEPLE 283
Query: 275 IKKAGHAFNYEKPKEFYKHLKSFL 298
I AGH + + LK F
Sbjct: 284 IADAGHFVQEFGEQVAREALKHFA 307
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Score = 78.3 bits (191), Expect = 4e-17
Identities = 35/306 (11%), Positives = 80/306 (26%), Gaps = 36/306 (11%)
Query: 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD 83
++ + D ++ N +V++HG H + + + D
Sbjct: 11 YQQGSLKVDDRHTLYFEQ--CGNPHGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFD 67
Query: 84 LLFFGDSFTTRPERSESFQAEC--VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
G S + + R+ V + + G S+G + + A +++
Sbjct: 68 QRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQV 127
Query: 142 EKVVICCSGVCLEE-----QDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP 196
++V+ + E + P L
Sbjct: 128 TELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDE 187
Query: 197 LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISN--------------------- 235
+ + + + + ++ + ++
Sbjct: 188 ATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQLL 247
Query: 236 ---IDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH-AFNYEKPKEFY 291
P +I+ G +D + PL+ L AQL + +GH AF E
Sbjct: 248 RDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAFEPENVDALV 306
Query: 292 KHLKSF 297
+ F
Sbjct: 307 RATDGF 312
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Score = 77.3 bits (188), Expect = 5e-17
Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 7/270 (2%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSF 91
DG+ + +V HG +A W N + + H + V D G S
Sbjct: 7 DGTNIFYKD--WGPRDGLPVVFHHGWPLSA-DDWDNQMLFFLSHGYRVIAHDRRGHGRSD 63
Query: 92 TTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKV--VICCS 149
A V + EA ++ +G S GG A+ + ++
Sbjct: 64 QPSTGHDMDTYAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123
Query: 150 GVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFK-RPPLSLVPSCLLSDY 208
+ + D + +E L ++ F+ + V L+ +
Sbjct: 124 PPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHW 183
Query: 209 IDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGD 268
E + A + ++ +I P L+ G DQ+ P + L
Sbjct: 184 WLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKSAELLA 243
Query: 269 NAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
NA L + H P+ L +F+
Sbjct: 244 NATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Score = 77.2 bits (188), Expect = 8e-17
Identities = 42/297 (14%), Positives = 92/297 (30%), Gaps = 36/297 (12%)
Query: 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPD 83
+ S D DG ++ + + N + V IHG + + + V + D
Sbjct: 11 YDSGWLDTGDGHRIYWEL--SGNPNGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFD 67
Query: 84 LLFF--GDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
+ + + R+ E V++ + G S+G + + A E++
Sbjct: 68 QRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERV 127
Query: 142 EKVVICCSGVCLE---------------------------EQDLRDRMFKVSDLEEASKI 174
++V+ + + + +D + ++
Sbjct: 128 SEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADP 187
Query: 175 LVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKIS 234
V KL + P S D+ A L D+ +
Sbjct: 188 QVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLLR 247
Query: 235 NIDK-ITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEF 290
N+ P +I+ G +D ++ L A+L +++ AGH++ ++P
Sbjct: 248 NVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSY--DEPGIL 301
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Score = 76.8 bits (187), Expect = 1e-16
Identities = 31/273 (11%), Positives = 75/273 (27%), Gaps = 20/273 (7%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFG-----DSFTTRPERSESFQ 102
+ ++ HG ++ + W NI+PH + DL+ G D +
Sbjct: 27 TGDPILFQHGNPTSS-YLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEHR 85
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRM 162
++ LV +G +G+ A + +E+++ + + E
Sbjct: 86 DYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQ 145
Query: 163 FKVSD-----------LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDA 211
+ + + + + PG + + + + +
Sbjct: 146 DRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLS 205
Query: 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
+ + + P L + E + R N
Sbjct: 206 WPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAEPGALTT-GRMRDFCRTWP-NQT 263
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPS 304
I + H + P E + +F+ +P+
Sbjct: 264 EITVA-GAHFIQEDSPDEIGAAIAAFVRRLRPA 295
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Score = 75.3 bits (183), Expect = 2e-16
Identities = 42/256 (16%), Positives = 86/256 (33%), Gaps = 6/256 (2%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106
+V IHG N W + + ++ + D G S A+ +
Sbjct: 18 QGRPVVFIHGWPLNG-DAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76
Query: 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKI--EKVVICCSGVCLEEQDLRDRMFK 164
++ ++ ++LV S GG + V++ + + D
Sbjct: 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVP 136
Query: 165 VSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELV 224
+ ++ + K+ F P + V + + +E V
Sbjct: 137 DEVFDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCV 196
Query: 225 RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA--F 282
A ++ K PTL++ G+ DQ+ P++ R + + NA+L V + + H
Sbjct: 197 DAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAM 256
Query: 283 NYEKPKEFYKHLKSFL 298
++F + L FL
Sbjct: 257 VPGDKEKFNRDLLEFL 272
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 74.2 bits (181), Expect = 8e-16
Identities = 31/280 (11%), Positives = 84/280 (30%), Gaps = 42/280 (15%)
Query: 31 LQDGSVMHCWVPKTRNDS---KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLL- 85
+ +G +H W + + +++ G + + + ++ F+V+ D L
Sbjct: 11 VNNGQELHVWETPPKENVPFKNNTILIASGFARR-MDHFAGLAEYLSTNGFHVFRYDSLH 69
Query: 86 FFGDSFTTRPERSESFQAE---CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIE 142
G S + E + + V ++ + + L+ S V Y + + +
Sbjct: 70 HVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFL 129
Query: 143 KVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202
+ + + + ++E L +
Sbjct: 130 ITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFE----------------------GH 167
Query: 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRL 262
L S+ C E+ + + + + + P + +D E +
Sbjct: 168 KLGSEVFVRDCFEHHWDTLDST--------LDKVANTSVPLIAFTANNDDWVKQEEVYDM 219
Query: 263 KSHL-GDNAQLIVIKKAGHAF--NYEKPKEFYKHLKSFLL 299
+H+ + +L + + H N + FY+ + +
Sbjct: 220 LAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAI 259
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Score = 74.2 bits (180), Expect = 8e-16
Identities = 42/267 (15%), Positives = 79/267 (29%), Gaps = 17/267 (6%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
+ P L+L+HG W+W+ +I + +++V VPDL FGDS + +
Sbjct: 27 AGPTLLLLHGWPGFW-WEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSLDKAA 85
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEK----------IEKVVICCSGVCLEEQD 157
A G + +F K + + V
Sbjct: 86 DDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGH 145
Query: 158 LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMC---- 213
+ + + + + +V S K+ ++ F + + + C
Sbjct: 146 VHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 205
Query: 214 --TEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
R +R + P ++WG D P N
Sbjct: 206 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPLIEFVPKYYSNYT 265
Query: 272 LIVIKKAGHAFNYEKPKEFYKHLKSFL 298
+ I+ GH EKP+ +K+
Sbjct: 266 METIEDCGHFLMVEKPEIAIDRIKTAF 292
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 290 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 72.6 bits (176), Expect = 3e-15
Identities = 44/281 (15%), Positives = 95/281 (33%), Gaps = 17/281 (6%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
+G ++ + K + K L+ +HG + ++ V D G S
Sbjct: 10 NGIYIYYKLCKA-PEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEE 68
Query: 93 TRPERSESFQAECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS- 149
+ + + +K+ L+G SYGG + + A ++++ ++ +++
Sbjct: 69 PDQSKFTIDYGVEEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGL 128
Query: 150 GVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP-----------PLS 198
+R+ + I S G + P
Sbjct: 129 SSVPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPE 188
Query: 199 LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258
++ S ++ + + + I I I PTLI GE+D++ P +
Sbjct: 189 VLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NV 247
Query: 259 GRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299
R + + ++L V + H +E + + K L F+L
Sbjct: 248 ARVIHEKIA-GSELHVFRDCSHLTMWEDREGYNKLLSDFIL 287
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 66.3 bits (161), Expect = 4e-13
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 47 DSKPDLVLIHGLGANA----LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESF 101
+K +VL HG+ + W I + VYV ++ S R E
Sbjct: 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS----EVRGEQL 60
Query: 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149
+ V ++ K++L+G S+GG +AA + I +
Sbjct: 61 -LQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Score = 63.3 bits (152), Expect = 4e-12
Identities = 32/286 (11%), Positives = 76/286 (26%), Gaps = 44/286 (15%)
Query: 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY--------FNVYVPDLLFFG 88
+ +P+ + + LIHG W + + ++ YV D G
Sbjct: 48 VRYQIPQRAK--RYPITLIHGCCLTG-MTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRG 104
Query: 89 DSFTTRPERSESFQAECVMRVMEA--HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVI 146
S T + + + + + + +G + + +
Sbjct: 105 RSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAEL 164
Query: 147 CCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLS 206
V + + + KL + + + + +
Sbjct: 165 WQQMVP--------DWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNP 216
Query: 207 DYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSH- 265
I A+ + E + P + P L+++G+H + FP R H
Sbjct: 217 KGITAIVSVEPGECPKPEDVKPL---------TSIPVLVVFGDHIEEFPRWAPRLKACHA 267
Query: 266 -------LGDNAQLIV-----IKKAGHAFNYEKPK-EFYKHLKSFL 298
G QL+ + H ++ + + ++
Sbjct: 268 FIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI 313
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Score = 63.3 bits (153), Expect = 5e-12
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 49 KPDLVLIHGLGANA-----LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQ 102
+ ++L+HGL + W I + H VYV +L F P
Sbjct: 8 RYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSD--DGPNGRGEQL 65
Query: 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149
V +V+ A K++L+G S GG +AA + + V +
Sbjct: 66 LAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 62.5 bits (150), Expect = 9e-12
Identities = 35/270 (12%), Positives = 74/270 (27%), Gaps = 24/270 (8%)
Query: 33 DGSVMHCWVPKTRNDSK-PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSF 91
+ + W + P +V HG A+ + ++ +H + + + S
Sbjct: 65 GNARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSE 124
Query: 92 TTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSG- 150
T +++ + + + S + E V G
Sbjct: 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGG 184
Query: 151 -VCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYI 209
+ + L D V P P + S +
Sbjct: 185 GLTIAAAALSDIPKAA----------VADYPYLSNFERAIDVALEQPYLEINSFFRRNGS 234
Query: 210 DAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDN 269
+ ++ + ++ D++ P L+ G D++ P +HL
Sbjct: 235 PETEVQA-------MKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETK 287
Query: 270 AQLIVIKKAGHAFNYEKPKE----FYKHLK 295
+L V + GH + E F + LK
Sbjct: 288 KELKVYRYFGHEYIPAFQTEKLAFFKQILK 317
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Score = 60.9 bits (147), Expect = 3e-11
Identities = 21/118 (17%), Positives = 36/118 (30%), Gaps = 6/118 (5%)
Query: 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANAL-WQWTNIIPHMIHY-FNVYVPDLLFFGDSF 91
+ + C + SKP ++L+ G G +N IP + F +
Sbjct: 17 DAGLTCQGASPSSVSKP-ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN- 74
Query: 92 TTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCS 149
+E + + KL ++ S GG V F KV +
Sbjct: 75 -DTQVNTEYM-VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMA 130
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 60.5 bits (145), Expect = 5e-11
Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 12/268 (4%)
Query: 33 DGSVMHCWVPKTRNDSKP-DLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSF 91
G + W+ + + + V+ + + + + +V D G +
Sbjct: 64 RGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHDWLFWPSMGYICFVMDTRGQGSGW 123
Query: 92 TTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151
+ + + + + L Y ++ A V V
Sbjct: 124 LK-GDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIV 182
Query: 152 CLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDA 211
VS L + +K L+ P P I
Sbjct: 183 IAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPY---------AEITN 233
Query: 212 MCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271
+ +++ + R + ++ + P L G D I P ++ +
Sbjct: 234 FLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKE 293
Query: 272 LIVIKKAGHAF-NYEKPKEFYKHLKSFL 298
+ + H + E K LK
Sbjct: 294 IRIYPYNNHEGGGSFQAVEQVKFLKKLF 321
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Score = 57.6 bits (137), Expect = 3e-10
Identities = 26/257 (10%), Positives = 71/257 (27%), Gaps = 35/257 (13%)
Query: 48 SKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAEC- 105
+ ++L+HG N+ + + + + P G +
Sbjct: 10 GERAVLLLHGFTGNS-ADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDV 68
Query: 106 --VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163
++ +K+++ GLS GG + + + +
Sbjct: 69 MNGYEFLKNKGYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYI------------ 116
Query: 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKREL 223
+ + R + + K
Sbjct: 117 ----------------KSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLK 160
Query: 224 VRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL-GDNAQLIVIKKAGHAF 282
++D I PT ++ HD++ + + + + Q+ +++GH
Sbjct: 161 ALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVI 220
Query: 283 NYEKPKE-FYKHLKSFL 298
++ K+ ++ + +FL
Sbjct: 221 TLDQEKDQLHEDIYAFL 237
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Score = 58.2 bits (139), Expect = 3e-10
Identities = 36/306 (11%), Positives = 82/306 (26%), Gaps = 45/306 (14%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-------IHYFNVYVPDLL 85
+G +H + + + L+HG + ++ I+ F++ VP L
Sbjct: 90 EGLTIHFAALFSEREDAVPIALLHGWPGSF-VEFYPILQLFREEYTPETLPFHLVVPSLP 148
Query: 86 FFGDSFTTRPERSESFQAEC--VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEK 143
+ S ++ V ++M+ ++ G + + +
Sbjct: 149 GYTFSSGPPLDKDFGLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKA 208
Query: 144 VVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPP------- 196
V + + + ++ E +++ + G + T
Sbjct: 209 VHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKFMTDGLAYAMEHSTRPSTIGHVLSSSP 268
Query: 197 ------------------------LSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRK 232
L +V L++ Y E A
Sbjct: 269 IALLAWIGEKYLQWVDKPLPSETILEMVSLYWLTESFPRAIHTYRETTPT-ASAPNGATM 327
Query: 233 ISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYK 292
+ I +P + D R + G+ + GH E+P+E
Sbjct: 328 LQKELYIHKPFGFSFFPKDLCPVP---RSWIATTGNLVFFRDHAEGGHFAALERPRELKT 384
Query: 293 HLKSFL 298
L +F+
Sbjct: 385 DLTAFV 390
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 51.9 bits (123), Expect = 3e-08
Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 48/280 (17%)
Query: 36 VMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRP 95
++ +P+ P ++++ GL + + + D G+ F +
Sbjct: 119 PVYVRIPEG-PGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKR 177
Query: 96 ERSESFQ-AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLE 154
+ + V+ ++ + +G L+
Sbjct: 178 IAGDYEKYTSAVVDLLTKLEAIRNDAIG-------------------VLGRSLGGNYALK 218
Query: 155 EQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT 214
R+ F L +
Sbjct: 219 SAACEPRLAACISW--------------------GGFSDLDYWDLETPLTKESWKYVSKV 258
Query: 215 EYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHL-GDNAQLI 273
+ LEE R V A + R + + +I PT IL G HD++ PL + + ++ L+
Sbjct: 259 DTLEEARLHVHAALETRDV--LSQIACPTYILHGVHDEV-PLSFVDTVLELVPAEHLNLV 315
Query: 274 VIKKAGHAFNYEKPKEFYKHLKSFLLD--SQPSPLPPSNQ 311
V K H + + +L D + P+ +
Sbjct: 316 VEKDGDHCC-HNLGIRPRLEMADWLYDVLVAGKKVAPTMK 354
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 50.9 bits (121), Expect = 4e-08
Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 8/209 (3%)
Query: 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANA-LWQWTNIIPHMIHYFNVYV 81
FR S V + ++ G A + ++T + + V
Sbjct: 18 DFREHFDGSDGFS--LDLVDMADGPGEVTVICCAGTAAISGPHEFTRLAGALRGIAPVRA 75
Query: 82 PDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKI 141
+ + P + A V+ K + G S G + Y++A + ++
Sbjct: 76 VPQPGYEEG-EPLPSSMAAVAAVQADAVIRTQGDKPFVVAGHSAGALMAYALATELLDRG 134
Query: 142 EKV--VICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT--FFKRPPL 197
V+ QD + + + V +L L Y + P
Sbjct: 135 HPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAYDRLTGQWRPR 194
Query: 198 SLVPSCLLSDYIDAMCTEYLEEKRELVRA 226
LL + M + +
Sbjct: 195 ETGLPTLLVSAGEPMGPWPDDSWKPTWPF 223
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.9 bits (120), Expect = 6e-08
Identities = 28/286 (9%), Positives = 70/286 (24%), Gaps = 31/286 (10%)
Query: 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFT 92
+G + + S+ L L+H + + + ++ + Y
Sbjct: 11 EGPTLMRL--NSVQSSERPLFLVHPIEGST-TVFHSLASRLS--IPTYGLQCTRAAPL-- 63
Query: 93 TRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152
+ S A + + + + G SYG V + M +Q + + S
Sbjct: 64 ---DSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFL 120
Query: 153 LEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAM 212
+ + S + + ++ + F ++ + L ++
Sbjct: 121 FDGSPTYVLAYTQSYRAKLTPGCEAEAETEAICFFVQQFTDMEHNRVLEALLPLKGLEER 180
Query: 213 CTEYLEEKRELVRAIPKDRKISNID------------------KITQPTLILWGEHDQIF 254
++ + + + + L
Sbjct: 181 VAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQYTPKAKYYGNVMLLRAKTGGAYGE 240
Query: 255 PLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKP--KEFYKHLKSFL 298
L L + VI + H E + + S L
Sbjct: 241 DLGADYNLSQVCDGKVSVHVI-EGDHRTLLEGSGLESIISIIHSSL 285
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Score = 51.0 bits (121), Expect = 6e-08
Identities = 26/262 (9%), Positives = 63/262 (24%), Gaps = 40/262 (15%)
Query: 42 PKTRNDSKPDLVLIHGLGANA-LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPER-SE 99
P R + + LV G AN ++ + + L +G T
Sbjct: 53 PTDRAEGRAVLVGCTGTAANGGPHEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPA 112
Query: 100 SFQA---ECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ 156
++ A + L+G S G + + +A + +
Sbjct: 113 DLDTALDAQARAILRAAGDAPVVLLGHSGGALLAHELAFRLERAH--------------- 157
Query: 157 DLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEY 216
P + + Y + P+ + L
Sbjct: 158 --------------------GAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPM 197
Query: 217 LEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIK 276
+ + + + + + P L++ E ++H + +
Sbjct: 198 SDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADVP 257
Query: 277 KAGHAFNYEKPKEFYKHLKSFL 298
+ + + S+L
Sbjct: 258 GDHFTMMRDHAPAVAEAVLSWL 279
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (112), Expect = 3e-07
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 245 ILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFL 298
I++G+ D + L N +++++K AGH +KP+E++ L FL
Sbjct: 155 IVYGDQDPMGQTSF--EHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 205
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Score = 46.6 bits (109), Expect = 1e-06
Identities = 27/260 (10%), Positives = 59/260 (22%), Gaps = 44/260 (16%)
Query: 41 VPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSES 100
V D + + + + N+ + P F +R +
Sbjct: 9 VTIMNQDQEQIIFAFPPVLGYG-LMYQNLSSRL--------PSYKLCAFDFIEEEDRLDR 59
Query: 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160
+ + L+L G S G + + A + + + V ++Q + D
Sbjct: 60 YADLI----QKLQPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSD 115
Query: 161 RMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEK 220
++ R +L + Y
Sbjct: 116 LD----------------GRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYYV 159
Query: 221 RELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280
+ + ++ +L D P L + ++ H
Sbjct: 160 NLI-----------STGQVKADIDLLTSGADFDIPEWL-ASWEEATTGAYRMKRG-FGTH 206
Query: 281 AFNYEKP--KEFYKHLKSFL 298
A + L FL
Sbjct: 207 AEMLQGETLDRNAGILLEFL 226
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Score = 42.1 bits (98), Expect = 1e-05
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 9/87 (10%)
Query: 50 PDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRV 109
P ++L+ + + + + Y+ DL +G + P + A V
Sbjct: 22 PPVLLVAE-------EASRWPEALPEGYAFYLLDLPGYGRT--EGPRMAPEELAHFVAGF 72
Query: 110 MEAHSVKKLSLVGLSYGGFVGYSMAAQ 136
++ ++ G +G + A
Sbjct: 73 AVMMNLGAPWVLLRGLGLALGPHLEAL 99
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} Length = 405 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 26/193 (13%), Positives = 65/193 (33%), Gaps = 9/193 (4%)
Query: 108 RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167
+ + + K+++ G SY G + Y A E + ++++ +G+ + +
Sbjct: 187 EIKASWANGKVAMTGKSYLGTMAYGAATTGVEGL-ELILAEAGIS----SWYNYYRENGL 241
Query: 168 LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI 227
+ S P + + Y+ L + + M + + +
Sbjct: 242 VR--SPGGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFW 299
Query: 228 PKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA-QLIVIKKAGHAF-NYE 285
+ N DK+ LI+ G D E L + + + + H + N
Sbjct: 300 HDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEGHAKHAFLHRGAHIYMNSW 359
Query: 286 KPKEFYKHLKSFL 298
+ +F + + ++
Sbjct: 360 QSIDFSETINAYF 372
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 42.0 bits (97), Expect = 3e-05
Identities = 16/164 (9%), Positives = 40/164 (24%), Gaps = 17/164 (10%)
Query: 41 VPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNV-------------YVPDLLFF 87
+ +S+ L L+HG G + + + + + +
Sbjct: 15 LLGAGKESRECLFLLHGSGVDE-TTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDP 73
Query: 88 GDSFTTRPERSESFQAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVV 145
+ A + H + + +G S G + S+ +
Sbjct: 74 TRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAA 133
Query: 146 ICCSGVCLEEQDLRDRMFKVSDLEEASKI-LVPQSPGKLKELMR 188
+ L+ D + + + L L+
Sbjct: 134 LLRPMPVLDHVPATDLAGIRTLIIAGAADETYGPFVPALVTLLS 177
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} Length = 376 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Score = 42.1 bits (98), Expect = 5e-05
Identities = 36/283 (12%), Positives = 76/283 (26%), Gaps = 18/283 (6%)
Query: 20 KRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNV 79
+ G + T ++D +H V + V+ +G +W P +
Sbjct: 106 RPYGAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVP 165
Query: 80 YVPDLLFFGDSFTTRPERSESFQAECVMR--VMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137
G + + + + L + Y
Sbjct: 166 IATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAM 225
Query: 138 KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPL 197
E+ +G + QD + + ++ F
Sbjct: 226 DERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKFAASF-- 283
Query: 198 SLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE 257
+ + + R +IP+ + ITQP LI+ D ++ +
Sbjct: 284 -----DANCYIAMTLKFDTHDISRGRAGSIPE-----ALAMITQPALIICARSDGLYSFD 333
Query: 258 LGRRLKSHLGDNAQLIVIK-KAGH-AFNYEKPKEFYKHLKSFL 298
+ + N++L V+ GH F E + ++ FL
Sbjct: 334 EHVEMGRSIP-NSRLCVVDTNEGHDFFVME-ADKVNDAVRGFL 374
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Score = 40.5 bits (94), Expect = 1e-04
Identities = 40/306 (13%), Positives = 80/306 (26%), Gaps = 49/306 (16%)
Query: 1 MSRCFSFTEAKNWCLKSCFKRLGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGA 60
+ C + + G R +QD + ++ K V +G
Sbjct: 94 IGGCKGSSGPLSIH-PETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGG 152
Query: 61 NALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQA---ECVMRVMEAHSVKK 117
+W+ P+ + V ++ + E K
Sbjct: 153 MQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKG 212
Query: 118 LSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177
L+L + G + Y + +EK G ++ F V
Sbjct: 213 LALARMV--GHITYLSDDKMREKF--------GRNPPRGNILSTDFAVGSYLIY------ 256
Query: 178 QSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNID 237
+F R DA Y+ + + + +
Sbjct: 257 ---------QGESFVDRF--------------DANSYIYVTKALDHYSLGKGKELTAALS 293
Query: 238 KITQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIK-KAGH-AFNYEKPKEFYK 292
T L++ D ++P R + L + ++ GH +F + + +
Sbjct: 294 NATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLLK-NPKQIE 352
Query: 293 HLKSFL 298
LK FL
Sbjct: 353 ILKGFL 358
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Score = 39.5 bits (91), Expect = 2e-04
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 49 KPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVM 107
+V++HG+G + + + I +++ ++ + F D T + V
Sbjct: 2 HNPVVMVHGIGGAS-FNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGP-VLSRFVQ 59
Query: 108 RVMEAHSVKKLSLVGLSYGGFVG--YSMAAQFKEKIEKVV 145
+V++ KK+ +V S GG Y K+ VV
Sbjct: 60 KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVV 99
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 38.5 bits (88), Expect = 5e-04
Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 16/135 (11%)
Query: 31 LQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDS 90
+ S H P VL+HG G + Q+ + ++ + P
Sbjct: 1 MTKDSYFHKSRAGVAG--APLFVLLHGTGGDE-NQFFDFGARLLPQATILSPVGDVSEHG 57
Query: 91 FTTRP-------------ERSESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137
ER+ A+ + E + + +G S G + ++ +
Sbjct: 58 AARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ 117
Query: 138 KEKIEKVVICCSGVC 152
E + V+ +
Sbjct: 118 PELFDAAVLMHPLIP 132
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 37.1 bits (84), Expect = 0.002
Identities = 23/127 (18%), Positives = 36/127 (28%), Gaps = 16/127 (12%)
Query: 41 VPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSE 99
+ + K L+ +HGL + ++P F + D G+ P
Sbjct: 16 LARIPEAPKALLLALHGLQGSK-EHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS 74
Query: 100 SFQ--------------AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVV 145
A V E L L G S G FV + + A+ +
Sbjct: 75 PRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLA 134
Query: 146 ICCSGVC 152
SG
Sbjct: 135 FIGSGFP 141
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 315 | |||
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 100.0 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 100.0 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 100.0 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 100.0 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 100.0 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 100.0 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 100.0 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 100.0 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 100.0 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 100.0 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 100.0 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 100.0 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 100.0 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 100.0 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 100.0 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 100.0 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 100.0 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 100.0 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 100.0 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 100.0 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 100.0 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.98 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.97 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.97 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.97 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.96 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.95 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.92 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.92 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.92 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.91 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.9 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.89 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.89 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.89 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.89 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.87 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.87 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.86 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.86 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.84 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.82 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.82 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.81 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.79 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.78 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.76 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.75 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.74 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.74 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.72 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.71 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.7 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.66 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.65 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.65 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.63 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.55 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.48 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.41 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.38 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.28 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.28 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.27 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.27 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.22 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.2 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.18 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.05 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.0 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 98.95 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.94 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 98.93 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 98.92 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.89 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 98.87 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.79 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.76 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 98.75 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 98.65 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 98.63 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 98.55 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.54 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 98.53 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 98.38 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.34 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 97.44 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 97.33 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 97.32 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 97.2 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 96.95 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.44 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 96.4 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 96.37 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 96.36 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.34 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.3 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 96.25 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.19 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.18 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 95.88 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 93.09 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 90.65 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 89.7 |
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=100.00 E-value=5.7e-38 Score=266.14 Aligned_cols=257 Identities=20% Similarity=0.316 Sum_probs=168.7
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCCCh--hhhHHhhHhhccccceEEeecCCCCCCCCCCCCC-C----CchhHHHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE-R----SESFQAEC 105 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~~~--~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~-~----~~~~~a~~ 105 (315)
++..+|++.. |++++|+||||||++++. ...|.++++.|+++|+|+++|+||||.|+..... . .....+++
T Consensus 12 ~~~~~h~~~~--G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 89 (281)
T d1c4xa_ 12 GTLASHALVA--GDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQ 89 (281)
T ss_dssp TTSCEEEEEE--SCTTSCEEEEECCCSTTCCHHHHHGGGHHHHHTTSEEEEECCTTSTTSCCCSSCCSSHHHHHHHHHHH
T ss_pred CCEEEEEEEE--ecCCCCEEEEECCCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCCCccccccccccccchhhHHHhhhh
Confidence 4578899886 466789999999987643 2358899999999999999999999999754321 1 12345778
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHH
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKE 185 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (315)
+.+++++++.++++|+||||||.+|+.+|.++|++|+++|++++........ .... ................+
T Consensus 90 i~~~i~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~ 162 (281)
T d1c4xa_ 90 ILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNAR-PPEL------ARLLAFYADPRLTPYRE 162 (281)
T ss_dssp HHHHHHHHTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSC-CHHH------HHHHTGGGSCCHHHHHH
T ss_pred ccccccccccccceeccccccccccccccccccccccceEEeccccCccccc-hhHH------HHHHHhhhhcccchhhh
Confidence 8899999999999999999999999999999999999999998643321110 0000 00111111111112222
Q ss_pred HHHhhhccCCCCCCCCcchhHHHHHHHHHHHHH-HHHHhhhcc---Cc--cccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 186 LMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLE-EKRELVRAI---PK--DRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~--~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
.+......+.... ................... ........+ .. ......+.++++|+|+|+|++|.++|++.+
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 241 (281)
T d1c4xa_ 163 LIHSFVYDPENFP-GMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVPLDTS 241 (281)
T ss_dssp HHHTTSSCSTTCT-THHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSCTHHH
T ss_pred hhhhhcccccccc-hhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcCHHHH
Confidence 2222111111100 0000111111110000000 001111111 11 112234678999999999999999999999
Q ss_pred HHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 260 ~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.+.+.+ +++++++++++||++++|+|++|++.|.+||+.
T Consensus 242 ~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 281 (281)
T d1c4xa_ 242 LYLTKHL-KHAELVVLDRCGHWAQLERWDAMGPMLMEHFRA 281 (281)
T ss_dssp HHHHHHC-SSEEEEEESSCCSCHHHHSHHHHHHHHHHHHHC
T ss_pred HHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHhCC
Confidence 9999998 789999999999999999999999999999973
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=100.00 E-value=6.9e-38 Score=263.28 Aligned_cols=257 Identities=20% Similarity=0.263 Sum_probs=174.8
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCCh--hhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~--~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
.++.+++ ||.++||... |++||||||||++++. ...|..+++.|+++|+|+++|+||||.|+.+....+...+
T Consensus 3 ~~~~~~~-dg~~l~y~~~----G~g~~vvllHG~~~~~~~~~~~~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 77 (268)
T d1j1ia_ 3 VERFVNA-GGVETRYLEA----GKGQPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIEYTQDRR 77 (268)
T ss_dssp EEEEEEE-TTEEEEEEEE----CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCSSCCCHHHH
T ss_pred cCeEEEE-CCEEEEEEEE----cCCCeEEEECCCCCCccHHHHHHHHHHHHhcCCEEEEEcccccccccCCccccccccc
Confidence 4566777 7999999875 2457899999998643 2358899999999999999999999999876666677778
Q ss_pred HHHHHHHHHHcCCC-ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 103 AECVMRVMEAHSVK-KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 103 a~~~~~~l~~l~~~-~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
++++.+++++++.+ +++++||||||.+++.+|.++|++|+++|+++++....... ........ ......
T Consensus 78 ~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~~~~~~--------~~~~~~ 147 (268)
T d1j1ia_ 78 IRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIH--EDLRPIIN--------YDFTRE 147 (268)
T ss_dssp HHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC--------------------CCSCHH
T ss_pred cccchhhHHHhhhcccceeeeccccccccchhhccChHhhheeeecCCCccccccc--hhhhhhhh--------hhhhhh
Confidence 99999999999874 68999999999999999999999999999997654332211 00000000 000111
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHH----HHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCch
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYL----EEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
......... ...... ............... ... ................+.++++++|+|+|+|++|.++|+
T Consensus 148 ~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~ 224 (268)
T d1j1ia_ 148 GMVHLVKAL-TNDGFK--IDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPV 224 (268)
T ss_dssp HHHHHHHHH-SCTTCC--CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred hhHHHHHHH-hhhhhh--hhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCCCH
Confidence 111111111 111110 111111111111000 000 000111111111123345778999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.++.+.+.+ +++++++++++||++++|+|++|++.|.+||.+
T Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~ 267 (268)
T d1j1ia_ 225 ETAYKFLDLI-DDSWGYIIPHCGHWAMIEHPEDFANATLSFLSL 267 (268)
T ss_dssp HHHHHHHHHC-TTEEEEEESSCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 9999999998 789999999999999999999999999999975
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=100.00 E-value=1.6e-37 Score=261.65 Aligned_cols=269 Identities=17% Similarity=0.170 Sum_probs=173.8
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
++++.||.+++|... +++++|+||||||++.+.. .|..+++.|. ++|+|+++|+||||.|..+...++...+++++
T Consensus 2 ~i~~~dG~~l~y~~~--G~~~~~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~~~~~~~~~~~~~ 78 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDW--GPRDGLPVVFHHGWPLSAD-DWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAADV 78 (275)
T ss_dssp EEECTTSCEEEEEEE--SCTTSCEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EEEecCCCEEEEEEe--cCCCCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeccccccccccccccccccccccc
Confidence 578899999999887 3456789999999999886 6999998874 56999999999999998766667777789999
Q ss_pred HHHHHHcCCCceEEEEEch-hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh-hhhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSY-GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR-DRMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSm-GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
.+++++++.++++++|||+ ||.+++.+|.++|++|+++|++++.......... .........................
T Consensus 79 ~~~l~~l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T d1a88a_ 79 AALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYI 158 (275)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHH
T ss_pred ccccccccccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhhhhHHHHH
Confidence 9999999999999999997 6667888899999999999999765432211100 0000000000010000000011111
Q ss_pred HHHHhhhccCCCCC-CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchH-HHHHH
Q 021229 185 ELMRYTFFKRPPLS-LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLE-LGRRL 262 (315)
Q Consensus 185 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l 262 (315)
......+....... .........+..................+...+....++++++|+|+|+|++|.++|.+ ..+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 238 (275)
T d1a88a_ 159 DVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYADAAPKS 238 (275)
T ss_dssp HHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred hhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCHHHHHHHH
Confidence 11111111110000 00111111111110000011111111111122233456789999999999999999875 45667
Q ss_pred HhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+.+ +++++++++++||++++|+|++|++.|.+||+.
T Consensus 239 ~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~s 275 (275)
T d1a88a_ 239 AELL-ANATLKSYEGLPHGMLSTHPEVLNPDLLAFVKS 275 (275)
T ss_dssp HHHS-TTEEEEEETTCCTTHHHHCHHHHHHHHHHHHHC
T ss_pred HHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHcC
Confidence 7777 789999999999999999999999999999973
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.6e-37 Score=261.70 Aligned_cols=266 Identities=17% Similarity=0.200 Sum_probs=169.9
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
.+++.||..++|... ++++||||+||+++++. .|..+++.|. ++|+|+++|+||||.|+.+....+...+++++
T Consensus 2 ~~~t~dG~~l~y~~~----G~g~~ivlvHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl 76 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDW----GQGRPVVFIHGWPLNGD-AWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTFADDL 76 (274)
T ss_dssp EEECTTSCEEEEEEE----CSSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred eEECcCCCEEEEEEE----CCCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCcccccccccccchhhHHHH
Confidence 478899999999876 24678999999999885 6999998885 56999999999999998766666777778999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhhhhhhhcccc-hhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVSD-LEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 184 (315)
.+++++++.++++++||||||.+++.+++++ |++|++++++++.................. .................
T Consensus 77 ~~~l~~l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T d1a8qa_ 77 NDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWK 156 (274)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhhHHHhh
Confidence 9999999999999999999999999877665 889999999876443221100000000000 00000000000000011
Q ss_pred HHHHhhhccCCCC-CCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHH
Q 021229 185 ELMRYTFFKRPPL-SLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRL 262 (315)
Q Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l 262 (315)
.... .+...... ..........+......................+....+.++++|+++|+|++|.++|.+. .+.+
T Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~ 235 (274)
T d1a8qa_ 157 DTAE-GFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKS 235 (274)
T ss_dssp HHHH-HHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHH
T ss_pred hhhh-hhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHHHHHH
Confidence 1111 11111110 0011111111111111001111111111111122334567899999999999999999765 5667
Q ss_pred HhhcCCCcEEEEEcCCCCcccc--CChHHHHHHHHHHHhc
Q 021229 263 KSHLGDNAQLIVIKKAGHAFNY--EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 263 ~~~~~~~~~~~~i~~~gH~~~~--e~p~~~~~~i~~fl~~ 300 (315)
++.+ +++++++++++||++++ ++|++|++.|.+||++
T Consensus 236 ~~~~-~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~k 274 (274)
T d1a8qa_ 236 AQII-PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLNK 274 (274)
T ss_dssp HHHS-TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHTC
T ss_pred HHhC-CCCEEEEECCCCCcccccccCHHHHHHHHHHHHCc
Confidence 7777 78999999999999887 6699999999999974
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.4e-37 Score=258.74 Aligned_cols=253 Identities=21% Similarity=0.337 Sum_probs=169.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCCh--hhhHHhhHhhccccceEEeecCCCCCCCCCCC-CCCCchhHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANA--LWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR-PERSESFQAE 104 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~--~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a~ 104 (315)
++++ ||..+||+.. |++||||||||++.+. ...|..+++.|+++|+|+++|+||||.|..+. ........++
T Consensus 7 ~i~~-~G~~~~Y~~~----G~G~pvvllHG~~~~~~~~~~~~~~~~~l~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 81 (271)
T d1uk8a_ 7 SILA-AGVLTNYHDV----GEGQPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVD 81 (271)
T ss_dssp EEEE-TTEEEEEEEE----CCSSEEEEECCCSTTCCHHHHHTTTHHHHTTTSEEEEECCTTSTTSCCCTTCCCCHHHHHH
T ss_pred EEEE-CCEEEEEEEE----eeCCeEEEECCCCCCccHHHHHHHHHHHHhCCCEEEEEeCCCCCCccccccccccccccch
Confidence 4544 7999999986 2467999999997653 23477889999989999999999999997643 3344566788
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-hhhhhhhcccchhhhhhhccCCCchHH
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ-DLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
++..+++.++.++++|+||||||.+++.+|.++|++++++|++++....... ......... .......
T Consensus 82 ~~~~~~~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 150 (271)
T d1uk8a_ 82 HIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY-----------TPSIENM 150 (271)
T ss_dssp HHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTC-----------CSCHHHH
T ss_pred hhhhhhhhhcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhc-----------cchhHHH
Confidence 9999999999999999999999999999999999999999998765432211 100000000 0011111
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHH-HHHHHHHhhhccC------ccccccccccCCCCeEEEEeCCCCCCch
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTE-YLEEKRELVRAIP------KDRKISNIDKITQPTLILWGEHDQIFPL 256 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 256 (315)
............. ................ ............. .......+.++++|+|+|+|++|.++|.
T Consensus 151 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 227 (271)
T d1uk8a_ 151 RNLLDIFAYDRSL---VTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPL 227 (271)
T ss_dssp HHHHHHHCSCGGG---CCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCH
T ss_pred HHHHHHHhhhccc---chhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCCCcCH
Confidence 1111111110000 0111100000000000 0000000000000 0012234678999999999999999999
Q ss_pred HHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 257 ELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+..+.+.+.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~e 270 (271)
T d1uk8a_ 228 SSSLRLGELI-DRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNE 270 (271)
T ss_dssp HHHHHHHHHC-TTEEEEEESSCCSCHHHHTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhC-CCCEEEEECCCCCchHHHCHHHHHHHHHHHHhc
Confidence 9999999998 689999999999999999999999999999986
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=100.00 E-value=1e-37 Score=265.14 Aligned_cols=267 Identities=16% Similarity=0.243 Sum_probs=177.6
Q ss_pred eeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHH
Q 021229 25 RSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAE 104 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~ 104 (315)
+.+++++ ||.++||... +++++|+||||||++.+.. .|.++++.|+++|+|+++|+||||.|+.+....+.+.+++
T Consensus 8 ~~~~i~~-~g~~i~y~~~--G~~~~p~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~d~~G~G~S~~~~~~~~~~~~~~ 83 (291)
T d1bn7a_ 8 DPHYVEV-LGERMHYVDV--GPRDGTPVLFLHGNPTSSY-LWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVR 83 (291)
T ss_dssp CCEEEEE-TTEEEEEEEE--SCSSSSCEEEECCTTCCGG-GGTTTHHHHTTTSCEEEECCTTSTTSCCCSCCCCHHHHHH
T ss_pred CCeEEEE-CCEEEEEEEe--CCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCCCCccccccccccchhHHHH
Confidence 4567887 6889999886 3456789999999999885 6999999999999999999999999987666677778899
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh----hhcccchhhhhhhccCCCc
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR----MFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 180 (315)
++.+++++++.++++|+||||||.+++.++.++|+++++++++++............ ...................
T Consensus 84 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (291)
T d1bn7a_ 84 YLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQN 163 (291)
T ss_dssp HHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHHHHHHTTSC
T ss_pred HHhhhhhhhccccccccccccccchhHHHHHhCCcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhHHHhhhhhh
Confidence 999999999999999999999999999999999999999999875443322110000 0000000000000000000
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCcc-----------ccccccccCCCCeEEEEe
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKD-----------RKISNIDKITQPTLILWG 248 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~P~lvi~G 248 (315)
.............. ........+...... ................ .....+.++++|+|+|+|
T Consensus 164 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G 238 (291)
T d1bn7a_ 164 AFIEGVLPKCVVRP-----LTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLLFWG 238 (291)
T ss_dssp HHHHTHHHHTCSSC-----CCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred hhHHhhhhhhcccc-----chHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEEEEe
Confidence 00000111000000 000000111000000 0000000000000000 011234678999999999
Q ss_pred CCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 249 EHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++|.++|++..+.+++.+ +++++++++++||+++.|+|+++++.|.+||+..
T Consensus 239 ~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~l 290 (291)
T d1bn7a_ 239 TPGVLIPPAEAARLAESL-PNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPGL 290 (291)
T ss_dssp EECSSSCHHHHHHHHHHS-TTEEEEEEEEESSCGGGTCHHHHHHHHHHHSGGG
T ss_pred CCCCCcCHHHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHhh
Confidence 999999999999999999 7899999999999999999999999999999864
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-37 Score=265.18 Aligned_cols=273 Identities=16% Similarity=0.226 Sum_probs=177.6
Q ss_pred cceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCC--CCC
Q 021229 22 LGFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRP--ERS 98 (315)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--~~~ 98 (315)
.++...++++.||.++||... +++|+||||||+++++. .|..+++.|.+ +|+|+++|+||||.|..+.. .++
T Consensus 9 ~~~~~~~v~~~~g~~i~y~~~----G~gp~vlllHG~~~~~~-~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 83 (322)
T d1zd3a2 9 SDMSHGYVTVKPRVRLHFVEL----GSGPAVCLCHGFPESWY-SWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYC 83 (322)
T ss_dssp GGSEEEEEEEETTEEEEEEEE----CCSSEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEEECTTSTTSCCCSCGGGGS
T ss_pred CCCceeEEEECCCCEEEEEEE----cCCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEecccccccccccccccccc
Confidence 456677899999999999986 24689999999999886 69999999975 59999999999999976432 335
Q ss_pred chhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh--hhhhhcccchhhhhhhc-
Q 021229 99 ESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL--RDRMFKVSDLEEASKIL- 175 (315)
Q Consensus 99 ~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 175 (315)
...+++++.+++++++.++++++||||||.+++.+|.++|++|.++|+++++........ ......... .......
T Consensus 84 ~~~~~~~i~~l~~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (322)
T d1zd3a2 84 MEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPV-FDYQLYFQ 162 (322)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGG-GHHHHHTT
T ss_pred ccccchhhhhhhhcccccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccch-hhhHHhhh
Confidence 566789999999999999999999999999999999999999999999976543221110 000000000 0000000
Q ss_pred cCCCch-----HHHHHHHhhhcc--------------------CCCCCCCCcchhHHHHHHHHHHHH----HHHHHhhhc
Q 021229 176 VPQSPG-----KLKELMRYTFFK--------------------RPPLSLVPSCLLSDYIDAMCTEYL----EEKRELVRA 226 (315)
Q Consensus 176 ~~~~~~-----~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 226 (315)
.+.... ...+.+...+.. ........................ ......+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1zd3a2 163 EPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRN 242 (322)
T ss_dssp STTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSC
T ss_pred ccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhcccccccccccc
Confidence 000000 000011100000 000000011111111111111100 000011100
Q ss_pred cC---ccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 227 IP---KDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 227 ~~---~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+. ........+++++|+|+|+|++|.+++++..+.+.+.+ +++++++++++||++++|+|++|++.|.+||++.
T Consensus 243 ~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~~~ 319 (322)
T d1zd3a2 243 MERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWI-PHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSD 319 (322)
T ss_dssp HHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTC-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHhhc
Confidence 00 00122345689999999999999999999999998888 7899999999999999999999999999999854
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=5.5e-37 Score=258.06 Aligned_cols=267 Identities=16% Similarity=0.176 Sum_probs=170.5
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
+.++.||..++|... +++||||||||++++.. .|..+++.|. ++|+|+++|+||||.|+.+...++...+++++
T Consensus 2 ~f~~~dG~~i~y~~~----G~g~pvvllHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 76 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW----GSGQPIVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTYADDL 76 (273)
T ss_dssp EEECTTSCEEEEEEE----SCSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHH
T ss_pred EEEeeCCcEEEEEEE----CCCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEechhcCccccccccccccchHHHH
Confidence 456779999999875 24678999999999886 6999999885 56999999999999998766666777789999
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHH-HHhhhhhhceeEEeeCCCccCchhhhh-hhhcccchhhhhhhccCCCchHHH
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSM-AAQFKEKIEKVVICCSGVCLEEQDLRD-RMFKVSDLEEASKILVPQSPGKLK 184 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~-a~~~p~~v~~lil~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 184 (315)
.+++++++.++++++||||||.++..+ +.++|++|.+++++++........... ........................
T Consensus 77 ~~~l~~l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (273)
T d1a8sa_ 77 AQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYK 156 (273)
T ss_dssp HHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999988765555 555699999999997654332110000 000000000000000000000111
Q ss_pred HHHHhhhccCCCCCC-CCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHH
Q 021229 185 ELMRYTFFKRPPLSL-VPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263 (315)
Q Consensus 185 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~ 263 (315)
.+....+........ ........+..................+........++++++|+++|+|++|.++|.+.++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~~~~~~ 236 (273)
T d1a8sa_ 157 DLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIAS 236 (273)
T ss_dssp HHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHH
T ss_pred HHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHHHHHHH
Confidence 111111111111000 0111111111111111111111112222222233456789999999999999999988777776
Q ss_pred hhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 264 SHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 264 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+.+.+++++++++++||++++|+|+++++.|.+||+
T Consensus 237 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 237 AALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp HHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 555478999999999999999999999999999996
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=100.00 E-value=1.3e-36 Score=257.84 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=167.5
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhH----hhccccceEEeecCCCCCCCCCCCC-CCCchhHHHHHHH
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNII----PHMIHYFNVYVPDLLFFGDSFTTRP-ERSESFQAECVMR 108 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~----~~l~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~a~~~~~ 108 (315)
+..+||... |++|+||||||++.+.. .|..+. +.+.++|+|+++|+||||.|..... ..+...+++++.+
T Consensus 19 ~~~i~y~~~----G~G~~ivllHG~~~~~~-~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~i~~ 93 (283)
T d2rhwa1 19 DFNIHYNEA----GNGETVIMLHGGGPGAG-GWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 93 (283)
T ss_dssp EEEEEEEEE----CCSSEEEEECCCSTTCC-HHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCCCSSCHHHHHHHHHHH
T ss_pred CEEEEEEEE----cCCCeEEEECCCCCChh-HHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccccccccchhhhhccc
Confidence 457888875 34689999999988774 476543 3445679999999999999976543 3344456889999
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
+++++++++++|+||||||.+|+.+|.++|++|+++|+++++....... .. ..........................
T Consensus 94 li~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (283)
T d2rhwa1 94 LMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMF-AP--MPMEGIKLLFKLYAEPSYETLKQMLQ 170 (283)
T ss_dssp HHHHHTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSS-SC--SSCHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred ccccccccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchh-hh--hhHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 9999999999999999999999999999999999999997654222110 00 00000001111111112222222222
Q ss_pred hhhccCCCCCCCCcchhHHHHHHHHHHHHH--H-HHHhh-hccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHh
Q 021229 189 YTFFKRPPLSLVPSCLLSDYIDAMCTEYLE--E-KRELV-RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKS 264 (315)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~ 264 (315)
....... ...+................ . ..... ......+....+.++++|+++|+|++|.++|++.++.+.+
T Consensus 171 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 247 (283)
T d2rhwa1 171 VFLYDQS---LITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLW 247 (283)
T ss_dssp HHCSCGG---GCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred Hhhcccc---cCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 2211110 01111111111111111100 0 00111 1111222345678899999999999999999999999999
Q ss_pred hcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 265 HLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 265 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 248 ~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk~ 282 (283)
T d2rhwa1 248 NI-DDARLHVFSKCGHWAQWEHADEFNRLVIDFLRH 282 (283)
T ss_dssp HS-SSEEEEEESSCCSCHHHHTHHHHHHHHHHHHHH
T ss_pred hC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHhC
Confidence 98 789999999999999999999999999999985
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=100.00 E-value=1.4e-35 Score=252.96 Aligned_cols=265 Identities=17% Similarity=0.240 Sum_probs=170.5
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHh-hHhhcc-ccceEEeecCCCCCCCCCCC---CCCCchh
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTN-IIPHMI-HYFNVYVPDLLFFGDSFTTR---PERSESF 101 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~---~~~~~~~ 101 (315)
+.+.+ +|..++|... |++++|+|||+||++.+.. .|.. +.+.|. ++|+|+++|+||||.|+... ..++...
T Consensus 3 ~~~~~-g~~~i~y~~~--G~~~~p~vvl~HG~~~~~~-~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 78 (297)
T d1q0ra_ 3 RIVPS-GDVELWSDDF--GDPADPALLLVMGGNLSAL-GWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGE 78 (297)
T ss_dssp EEEEE-TTEEEEEEEE--SCTTSCEEEEECCTTCCGG-GSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCTTTSCCCHHH
T ss_pred eEEEE-CCEEEEEEEe--cCCCCCEEEEECCCCcChh-HHHHHHHHHHHhCCCEEEEEeCCCCcccccccccccccccch
Confidence 44555 6788999876 4557889999999998875 5754 566654 56999999999999997432 2346677
Q ss_pred HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh-hh-hhcccc----------hh
Q 021229 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR-DR-MFKVSD----------LE 169 (315)
Q Consensus 102 ~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~-~~~~~~----------~~ 169 (315)
+++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.......... .. ...... ..
T Consensus 79 ~~~d~~~ll~~l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (297)
T d1q0ra_ 79 LAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQPFL 158 (297)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCHHHH
T ss_pred hhhhhccccccccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhhhHHHH
Confidence 7899999999999999999999999999999999999999999998765433221100 00 000000 00
Q ss_pred hh-hhhccCCC-c-hHHHHHHH-hhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh--------ccCccccccccc
Q 021229 170 EA-SKILVPQS-P-GKLKELMR-YTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVR--------AIPKDRKISNID 237 (315)
Q Consensus 170 ~~-~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~ 237 (315)
.. .....+.. . ........ ......... .........+.... ......... .....+....++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (297)
T d1q0ra_ 159 DALALMNQPAEGRAAEVAKRVSKWRILSGTGV-PFDDAEYARWEERA----IDHAGGVLAEPYAHYSLTLPPPSRAAELR 233 (297)
T ss_dssp HHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSS-CCCHHHHHHHHHHH----HHHTTTCCSCCCGGGGCCCCCGGGGGGGG
T ss_pred HHHHHhccccchhhHHHHHHHHHHhhhccccc-cchHHHHHHHHHHh----hhhccccchhhhhhhhhhhccccchhhhh
Confidence 00 00000000 0 00000000 000000000 00000000010000 000000000 001112234677
Q ss_pred cCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 238 ~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
+|++|+++|+|++|.++|++.++.+.+.+ +++++++++++||+++.|+|+++++.|.+||++.
T Consensus 234 ~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~ 296 (297)
T d1q0ra_ 234 EVTVPTLVIQAEHDPIAPAPHGKHLAGLI-PTARLAEIPGMGHALPSSVHGPLAEVILAHTRSA 296 (297)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHTS-TTEEEEEETTCCSSCCGGGHHHHHHHHHHHHHHT
T ss_pred ccCCceEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCcchhhCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999 7999999999999999999999999999999853
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=100.00 E-value=9.2e-36 Score=253.05 Aligned_cols=268 Identities=19% Similarity=0.214 Sum_probs=169.7
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC----CCc
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE----RSE 99 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~----~~~ 99 (315)
++..++.++ |.++||+.. +++|+||||||+++++. .|.++++.|.++|+|+++|+||||.|+..... .+.
T Consensus 8 ~~~~~~~~~-~~~l~y~~~----G~gp~vv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~ 81 (293)
T d1ehya_ 8 FKHYEVQLP-DVKIHYVRE----GAGPTLLLLHGWPGFWW-EWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLNDLSKYSL 81 (293)
T ss_dssp SCEEEEECS-SCEEEEEEE----ECSSEEEEECCSSCCGG-GGHHHHHHHHTTSEEEEECCTTSTTSCCCCTTCGGGGCH
T ss_pred CcceEEEEC-CEEEEEEEE----CCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEecCCcccCCccccccccccccc
Confidence 445567774 778999885 24689999999999886 69999999999999999999999999754332 234
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhh-hhh-----h-hcccchhhhh
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-RDR-----M-FKVSDLEEAS 172 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~-----~-~~~~~~~~~~ 172 (315)
..+++++.++++++++++++|+||||||.+|+.+|.++|+++.+++++++......... ... . ..........
T Consensus 82 ~~~a~~~~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (293)
T d1ehya_ 82 DKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAV 161 (293)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHH
T ss_pred hhhhhHHHhhhhhcCccccccccccccccchhcccccCccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchhh
Confidence 45688999999999999999999999999999999999999999999976542211100 000 0 0000000000
Q ss_pred hhccCCCchHHHHHHHhhhccCCC-CCCCCcchhHHHHHHHHH-HHHHHHHHhhhccCccc----cccccccCCCCeEEE
Q 021229 173 KILVPQSPGKLKELMRYTFFKRPP-LSLVPSCLLSDYIDAMCT-EYLEEKRELVRAIPKDR----KISNIDKITQPTLIL 246 (315)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~l~~i~~P~lvi 246 (315)
. ............+...+..... ...........+...... .........+....... .......+++|+++|
T Consensus 162 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii 240 (293)
T d1ehya_ 162 E-VVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMI 240 (293)
T ss_dssp H-HHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEE
T ss_pred h-hhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEE
Confidence 0 0111111122222211111100 001111111222111111 01111111111111111 111234688999999
Q ss_pred EeCCCCCCchHHH-HHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 247 WGEHDQIFPLELG-RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 247 ~G~~D~~~~~~~~-~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
+|++|.++|.+.. +.+.+.. +++++++++++||++++|+|+++++.|.+|++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 241 WGLGDTCVPYAPLIEFVPKYY-SNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp EECCSSCCTTHHHHHHHHHHB-SSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred EeCCCCCcCHHHHHHHHHHhC-CCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 9999999997654 5566666 78999999999999999999999999999974
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=7.6e-36 Score=252.54 Aligned_cols=266 Identities=17% Similarity=0.256 Sum_probs=166.9
Q ss_pred eeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCC-CCCCchhHH
Q 021229 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTR-PERSESFQA 103 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~a 103 (315)
++++++ ||.+++|..... +.++|+||||||+++++. .|...+..+ .++|+|+++|+||||.|+.+. ..++....+
T Consensus 4 ~~~~~~-~g~~i~y~~~g~-~~~~~~iv~lHG~~g~~~-~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 80 (290)
T d1mtza_ 4 ENYAKV-NGIYIYYKLCKA-PEEKAKLMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGV 80 (290)
T ss_dssp EEEEEE-TTEEEEEEEECC-SSCSEEEEEECCTTTCCS-GGGGGGGGGGGGTEEEEEECCTTSTTSCCCCGGGCSHHHHH
T ss_pred cCeEEE-CCEEEEEEEcCC-CCCCCeEEEECCCCCchH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccccccchh
Confidence 457777 688999877643 234678999999876554 355555544 557999999999999997543 345666778
Q ss_pred HHHHHHHHHc-CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh-hhhhhhc-cc-----chhhhhhhc
Q 021229 104 ECVMRVMEAH-SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFK-VS-----DLEEASKIL 175 (315)
Q Consensus 104 ~~~~~~l~~l-~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~-~~-----~~~~~~~~~ 175 (315)
+++.++++++ +.++++||||||||.+|+.+|.++|++|++++++++........ ....... .. .........
T Consensus 81 ~~l~~ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (290)
T d1mtza_ 81 EEAEALRSKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGSSG 160 (290)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHHHT
T ss_pred hhhhhhhcccccccccceecccccchhhhhhhhcChhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHHHhhhhc
Confidence 9999999987 78999999999999999999999999999999987544322110 0000000 00 000000000
Q ss_pred cCCCchHHHHHHHhhhccC-CCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc---------cCccccccccccCCCCeEE
Q 021229 176 VPQSPGKLKELMRYTFFKR-PPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA---------IPKDRKISNIDKITQPTLI 245 (315)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~i~~P~lv 245 (315)
....+ ............. ......+...... ............... ....+....+.++++|+++
T Consensus 161 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~ 235 (290)
T d1mtza_ 161 SYENP-EYQEAVNYFYHQHLLRSEDWPPEVLKS----LEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLI 235 (290)
T ss_dssp CTTCH-HHHHHHHHHHHHHTSCSSCCCHHHHHH----HHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEE
T ss_pred cccch-hHHHHHHHHhhhhhcccccchHHHHHH----HHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEEE
Confidence 00111 1111111111000 0000111111111 110000000111110 0111233456788999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
|+|++|.++| +.++.+.+.+ +++++++++++||++++|+|+++++.|.+||++.
T Consensus 236 i~G~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 236 TVGEYDEVTP-NVARVIHEKI-AGSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp EEETTCSSCH-HHHHHHHHHS-TTCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred EEeCCCCCCH-HHHHHHHHHC-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 9999999876 5678888888 6899999999999999999999999999999863
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=100.00 E-value=4.4e-36 Score=251.78 Aligned_cols=264 Identities=19% Similarity=0.217 Sum_probs=167.5
Q ss_pred ecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHH
Q 021229 30 DLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMR 108 (315)
Q Consensus 30 ~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~ 108 (315)
+..||..++|... +++|||||+||++++.. .|..+++.|.+ +|+|+++|+||||.|+.+....+...+++++.+
T Consensus 4 ~~~dG~~l~y~~~----G~g~~vv~lHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 78 (271)
T d1va4a_ 4 VAKDGTQIYFKDW----GSGKPVLFSHGWLLDAD-MWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ 78 (271)
T ss_dssp ECTTSCEEEEEEE----SSSSEEEEECCTTCCGG-GGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHH
T ss_pred EeECCeEEEEEEE----cCCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccccccccccee
Confidence 3458999998875 24578999999999886 59999999965 599999999999999876666677778999999
Q ss_pred HHHHcCCCceEEEEEchhHHHHH-HHHHhhhhhhceeEEeeCCCccCchh-hhhhhhcccchhhhhhhccCCCchHHHHH
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGY-SMAAQFKEKIEKVVICCSGVCLEEQD-LRDRMFKVSDLEEASKILVPQSPGKLKEL 186 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~-~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (315)
++++++.++++++|||+||.+++ .+|.++|+++.+++++++........ .............................
T Consensus 79 ~~~~~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (271)
T d1va4a_ 79 LIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQFISDF 158 (271)
T ss_dssp HHHHHTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 99999999999999999997655 45667799999999987654322110 00000000000000000000000000111
Q ss_pred HHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHH-hh
Q 021229 187 MRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK-SH 265 (315)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~-~~ 265 (315)
.. .+............................................++++++|+++|+|++|.++|.+...++. +.
T Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 237 (271)
T d1va4a_ 159 NA-PFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTGKVAAEL 237 (271)
T ss_dssp HH-HHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTHHHHHHH
T ss_pred cc-hhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHHHHHHHh
Confidence 11 11110000001111111111111111111111122222222233456789999999999999999988776664 55
Q ss_pred cCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 238 ~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~k 271 (271)
T d1va4a_ 238 I-KGAELKVYKDAPHGFAVTHAQQLNEDLLAFLKR 271 (271)
T ss_dssp S-TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHTC
T ss_pred C-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 5 789999999999999999999999999999975
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=100.00 E-value=1.4e-35 Score=249.88 Aligned_cols=256 Identities=17% Similarity=0.158 Sum_probs=162.7
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH 113 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l 113 (315)
..++|... +++|||||+||++++.. .|..+++.|. ++|+|+++|+||||.|+......+...+++++.++++++
T Consensus 13 v~i~y~~~----G~G~~ivllHG~~~~~~-~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~dl~~~l~~l 87 (277)
T d1brta_ 13 IDLYYEDH----GTGQPVVLIHGFPLSGH-SWERQSAALLDAGYRVITYDRRGFGQSSQPTTGYDYDTFAADLNTVLETL 87 (277)
T ss_dssp EEEEEEEE----CSSSEEEEECCTTCCGG-GGHHHHHHHHHTTCEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEE----ccCCeEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeCCCCCcccccccccchhhhhhhhhhhhhcc
Confidence 45777664 34689999999998885 6999998875 469999999999999986666667777899999999999
Q ss_pred CCCceEEEEEchhH-HHHHHHHHhhhhhhceeEEeeCCCccCchhh--hhhhhcccchhhhhhhccCCCchHHHHHHHhh
Q 021229 114 SVKKLSLVGLSYGG-FVGYSMAAQFKEKIEKVVICCSGVCLEEQDL--RDRMFKVSDLEEASKILVPQSPGKLKELMRYT 190 (315)
Q Consensus 114 ~~~~v~lvGhSmGG-~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
++++++|+|||||| .++..++.++|++|+++|++++......... ................................
T Consensus 88 ~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (277)
T d1brta_ 88 DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDF 167 (277)
T ss_dssp TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CcccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhccchhhhhhccccc
Confidence 99999999999996 5566677888999999999976543221100 00000000000000000000001111111111
Q ss_pred hccCCCCCCCCcchhHHHHHHHHHH----HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHHhh
Q 021229 191 FFKRPPLSLVPSCLLSDYIDAMCTE----YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSH 265 (315)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~~~ 265 (315)
+..... ................ ............ ..+....++++++|+++|+|++|.+++.+. .+.+.+.
T Consensus 168 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~ 243 (277)
T d1brta_ 168 YNLDEN---LGTRISEEAVRNSWNTAASGGFFAAAAAPTTW-YTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKA 243 (277)
T ss_dssp TTHHHH---BTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGT-TCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHH
T ss_pred cccchh---hhhhhhHHHhhhhhcccchhhhhhhhhhhhhh-hhhHHHHHHhcCccceeEeecCCCCcCHHHHHHHHHHh
Confidence 100000 0011111111111000 000000000111 112345678899999999999999998765 5667777
Q ss_pred cCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 266 LGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+ +++++++++++||++++|+|++|++.|.+||++
T Consensus 244 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~k 277 (277)
T d1brta_ 244 L-PSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAK 277 (277)
T ss_dssp C-TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred C-CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 7 789999999999999999999999999999974
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=100.00 E-value=6e-36 Score=252.62 Aligned_cols=260 Identities=18% Similarity=0.200 Sum_probs=161.6
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhc-cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH 113 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l 113 (315)
+.++|... +++|||||+||++.++. .|..+++.+ .++|+|+++|+||||.|+.+...++...+++++.++++++
T Consensus 13 v~i~y~~~----G~g~~illlHG~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~di~~~i~~l 87 (279)
T d1hkha_ 13 IELYYEDQ----GSGQPVVLIHGYPLDGH-SWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTFAADLHTVLETL 87 (279)
T ss_dssp EEEEEEEE----SSSEEEEEECCTTCCGG-GGHHHHHHHHHTTEEEEEECCTTSTTSCCCSSCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEE----ccCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEechhhCCccccccccchhhhhhhhhhhhhhc
Confidence 46777664 34689999999999885 699988766 6679999999999999987666677777899999999999
Q ss_pred CCCceEEEEEchhH-HHHHHHHHhhhhhhceeEEeeCCCccCchhh-hhhhhcccchhhhhhhccCCCchHHHHHHHhhh
Q 021229 114 SVKKLSLVGLSYGG-FVGYSMAAQFKEKIEKVVICCSGVCLEEQDL-RDRMFKVSDLEEASKILVPQSPGKLKELMRYTF 191 (315)
Q Consensus 114 ~~~~v~lvGhSmGG-~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (315)
++++++|+|||||| .++..+|.++|++|.+++++++......... .................................
T Consensus 88 ~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (279)
T d1hkha_ 88 DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFY 167 (279)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhhhhhhhhhhhhhhc
Confidence 99999999999996 5666677778999999999976543321100 000000000000000000000001111111100
Q ss_pred c-cCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCcc--ccccccccCCCCeEEEEeCCCCCCchH-HHHHHHhhcC
Q 021229 192 F-KRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKD--RKISNIDKITQPTLILWGEHDQIFPLE-LGRRLKSHLG 267 (315)
Q Consensus 192 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lvi~G~~D~~~~~~-~~~~l~~~~~ 267 (315)
. ...................................... ...+.+..+++|+++|+|++|.++|.+ ..+.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~- 246 (279)
T d1hkha_ 168 NLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAV- 246 (279)
T ss_dssp THHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHC-
T ss_pred ccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccCHHHHHHHHHHhC-
Confidence 0 00000001111111111100000000000000000000 122345668899999999999999865 567888888
Q ss_pred CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 268 DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 268 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+++++++++++||++++|+|+++++.|.+||++
T Consensus 247 p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~k 279 (279)
T d1hkha_ 247 PEADYVEVEGAPHGLLWTHADEVNAALKTFLAK 279 (279)
T ss_dssp TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCchHHhCHHHHHHHHHHHHCc
Confidence 689999999999999999999999999999975
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.9e-36 Score=249.07 Aligned_cols=239 Identities=20% Similarity=0.218 Sum_probs=152.2
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhH
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGG 127 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG 127 (315)
++++||||||+++++. .|..+++.|+++|+|+++|+||||.|+..... + ..++.+.+..+..++++|+||||||
T Consensus 10 g~~~lvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~~G~G~S~~~~~~-~----~~d~~~~~~~~~~~~~~l~GhS~Gg 83 (256)
T d1m33a_ 10 GNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFGAL-S----LADMAEAVLQQAPDKAIWLGWSLGG 83 (256)
T ss_dssp CSSEEEEECCTTCCGG-GGGGTHHHHHTTSEEEEECCTTSTTCCSCCCC-C----HHHHHHHHHTTSCSSEEEEEETHHH
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEeCCCCCCccccccc-c----ccccccccccccccceeeeecccch
Confidence 3578999999999886 69999999999999999999999999643322 1 2234455566778999999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHH
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSD 207 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (315)
.+++.+|.++|+++++++++++............... .........+. ......+...+..... .......
T Consensus 84 ~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~ 154 (256)
T d1m33a_ 84 LVASQIALTHPERVRALVTVASSPCFSARDEWPGIKP-DVLAGFQQQLS----DDQQRTVERFLALQTM----GTETARQ 154 (256)
T ss_dssp HHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCH-HHHHHHHHHHH----HHHHHHHHHHHHTTST----TSTTHHH
T ss_pred HHHHHHHHhCCcccceeeeeecccccccchhhhhhHH-HHHHHHHhhhh----hhhHHHHHHHhhhhhc----cccchhh
Confidence 9999999999999999999875543322110000000 00000000000 0000000000000000 0000000
Q ss_pred HHHHHHHH-------HHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCC
Q 021229 208 YIDAMCTE-------YLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGH 280 (315)
Q Consensus 208 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH 280 (315)
........ ...........+...+....++++++|+++|+|++|.++|++.++.+.+.+ +++++++++++||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~l~~~~-~~~~~~~i~~~gH 233 (256)
T d1m33a_ 155 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAH 233 (256)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTC-TTCEEEEETTCCS
T ss_pred HHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 00000000 000000111111112234567889999999999999999999999999888 6899999999999
Q ss_pred ccccCChHHHHHHHHHHHhcCC
Q 021229 281 AFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 281 ~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
++++|+|++|++.|.+||++..
T Consensus 234 ~~~~e~p~~~~~~l~~fl~~ig 255 (256)
T d1m33a_ 234 APFISHPAEFCHLLVALKQRVG 255 (256)
T ss_dssp CHHHHSHHHHHHHHHHHHTTSC
T ss_pred chHHHCHHHHHHHHHHHHHHcC
Confidence 9999999999999999998763
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=100.00 E-value=1.7e-34 Score=249.00 Aligned_cols=267 Identities=13% Similarity=0.107 Sum_probs=165.2
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCchh
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSESF 101 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~~ 101 (315)
++..+++++||.+++|... |+++++|||||||+++++. .|..+...+..+|+|+++|+||||.|+.+. ..++...
T Consensus 11 ~~~~~i~~~dg~~i~y~~~--G~~~g~pvvllHG~~g~~~-~~~~~~~~l~~~~~Vi~~D~rG~G~S~~~~~~~~~~~~~ 87 (313)
T d1azwa_ 11 YQQGSLKVDDRHTLYFEQC--GNPHGKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWD 87 (313)
T ss_dssp SEEEEEECSSSCEEEEEEE--ECTTSEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCTTSTTSBSTTCCTTCCHHH
T ss_pred CCCCEEEeCCCcEEEEEEe--cCCCCCEEEEECCCCCCcc-chHHHhHHhhcCCEEEEEeccccCCCCccccccchhHHH
Confidence 5677899999999999876 4556789999999987764 588777777888999999999999998543 3345667
Q ss_pred HHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh--hhhh-hhcc--cchhhhhhhc-
Q 021229 102 QAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD--LRDR-MFKV--SDLEEASKIL- 175 (315)
Q Consensus 102 ~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~~-~~~~--~~~~~~~~~~- 175 (315)
+++++.++++++++++++|+||||||.+++.+|.++|++|++++++++........ .... .... ..........
T Consensus 88 ~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (313)
T d1azwa_ 88 LVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIP 167 (313)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHHHhhh
Confidence 79999999999999999999999999999999999999999999987654332110 0000 0000 0000000000
Q ss_pred ---------------cCCCchHHHHHH-Hhhh--ccCCCCCCCCcchhHHHHHHHHHHHHHHHHH---hhhccCc-cc--
Q 021229 176 ---------------VPQSPGKLKELM-RYTF--FKRPPLSLVPSCLLSDYIDAMCTEYLEEKRE---LVRAIPK-DR-- 231 (315)
Q Consensus 176 ---------------~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~-- 231 (315)
............ .... ...... .........+.............. ....... ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
T d1azwa_ 168 PVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFL-HVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQL 246 (313)
T ss_dssp GGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSS-SCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhcccccccc-ccchhhhcccchhHHHHHHhHHHHHHHhhccccccchhh
Confidence 000000000000 0000 000000 000000000000000000000000 0011111 10
Q ss_pred cccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHH---HHHHHHHH
Q 021229 232 KISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKE---FYKHLKSF 297 (315)
Q Consensus 232 ~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~---~~~~i~~f 297 (315)
.......+++|+++|+|++|.++|++.++.+++.+ +++++++++++||+++ +|+. +.+++.+|
T Consensus 247 ~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~-p~a~~~~i~~aGH~~~--ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 247 LRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAW-PKAQLQISPASGHSAF--EPENVDALVRATDGF 312 (313)
T ss_dssp HHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSSTT--SHHHHHHHHHHHHHH
T ss_pred hHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCCCC--CchHHHHHHHHHHHh
Confidence 12234568899999999999999999999999999 7999999999999976 3654 45555655
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=100.00 E-value=6.2e-35 Score=250.99 Aligned_cols=258 Identities=15% Similarity=0.224 Sum_probs=164.8
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCC--CCCCchhHHHHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTR--PERSESFQAECVMR 108 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~a~~~~~ 108 (315)
.||.++||+..+++ ...|+|||+||+++++. .|..++..|.+ +|+|+++|+||||.|..+. ..++...+++++.+
T Consensus 31 ~~g~~~~y~~~G~~-~~~p~llllHG~~~~~~-~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~l~~ 108 (310)
T d1b6ga_ 31 YPGLRAHYLDEGNS-DAEDVFLCLHGEPTWSY-LYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLA 108 (310)
T ss_dssp CTTCEEEEEEEECT-TCSCEEEECCCTTCCGG-GGTTTHHHHHHTTCEEEEECCTTSTTSCEESCGGGCCHHHHHHHHHH
T ss_pred CCCEEEEEEEecCC-CCCCEEEEECCCCCchH-HHHHHHHHhhccCceEEEeeecCccccccccccccccccccccchhh
Confidence 37899999887432 23567899999999885 69999988875 5999999999999997532 34567778999999
Q ss_pred HHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh---hhhhhhcccch-hhhh-hhccCCCchHH
Q 021229 109 VMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD---LRDRMFKVSDL-EEAS-KILVPQSPGKL 183 (315)
Q Consensus 109 ~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~---~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 183 (315)
+++++++++++|+||||||.+++.+|.++|++|+++|+++++....... ........... .... ....+... ..
T Consensus 109 ~l~~l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 187 (310)
T d1b6ga_ 109 LIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDL-RL 187 (310)
T ss_dssp HHHHHTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHHSCSSC-CH
T ss_pred hhhhccccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhhccchhh-hh
Confidence 9999999999999999999999999999999999999998765332111 00000000000 0000 00000000 00
Q ss_pred HHHHHhh----------hccCCCCCCCCcchhHHHHHHHHHHH---HHHHHHhhhccCccccccccccCCCCeEEEEeCC
Q 021229 184 KELMRYT----------FFKRPPLSLVPSCLLSDYIDAMCTEY---LEEKRELVRAIPKDRKISNIDKITQPTLILWGEH 250 (315)
Q Consensus 184 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~ 250 (315)
....... .+.... ................ ....... ..........++++|+++++|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~l~i~G~~ 259 (310)
T d1b6ga_ 188 DQFMKRWAPTLTEAEASAYAAPF----PDTSYQAGVRKFPKMVAQRDQACIDI----STEAISFWQNDWNGQTFMAIGMK 259 (310)
T ss_dssp HHHHHHHSTTCCHHHHHHHHTTC----SSGGGCHHHHHHHHHHHSCCHHHHHH----HHHHHHHHHHTCCSEEEEEEETT
T ss_pred hhhhhccCccccHHHHHHHHhhc----chhhhhhcchhhhhhhhhhhhhhhhh----hhhhhHHhhcccCCCeEEEEeCC
Confidence 0000000 000000 0000000000000000 0000000 00001112356899999999999
Q ss_pred CCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 251 DQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 251 D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|.+++++..+.+.+.++...+++++++|||+++.|+|+.+++.|.+||++
T Consensus 260 D~~~~~~~~~~~~~~~~~~~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 260 DKLLGPDVMYPMKALINGCPEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp CSSSSHHHHHHHHHHSTTCCCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHhcCCCccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 99999999999998884324788999999999999999999999999985
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-34 Score=235.02 Aligned_cols=194 Identities=18% Similarity=0.294 Sum_probs=152.0
Q ss_pred eeeeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChhhhHHh--hHhhcccc-ceEEeecCCCCCCCCCCCCC--CCc
Q 021229 26 SSVTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANALWQWTN--IIPHMIHY-FNVYVPDLLFFGDSFTTRPE--RSE 99 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~~~w~~--~~~~l~~~-~~vi~~D~~G~G~S~~~~~~--~~~ 99 (315)
+.++.+ +|..++|....+ .+..+++|||+||++.+.. .|.. +++.|++. |+|+++|+||||.|...... ...
T Consensus 8 e~~i~v-~G~~i~y~~~~~~~~~~~~~vvllHG~~~~~~-~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~~~~~ 85 (208)
T d1imja_ 8 EGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSE-TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPAPIGE 85 (208)
T ss_dssp CCCEEE-TTEEECEEEEECSSSCCSCEEEECCCTTCCHH-HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSSCTTS
T ss_pred EEEEEE-CCEEEEEEEecCCCCCCCCeEEEECCCCCChh-HHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcccccch
Confidence 346666 688889876543 2345779999999998875 5876 45677654 99999999999999754322 233
Q ss_pred hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCC
Q 021229 100 SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQS 179 (315)
Q Consensus 100 ~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
...++++.++++.++.++++|+||||||.+++.+|.++|++++++|++++....
T Consensus 86 ~~~~~~l~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~-------------------------- 139 (208)
T d1imja_ 86 LAPGSFLAAVVDALELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTD-------------------------- 139 (208)
T ss_dssp CCCTHHHHHHHHHHTCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGG--------------------------
T ss_pred hhhhhhhhhcccccccccccccccCcHHHHHHHHHHHhhhhcceeeecCccccc--------------------------
Confidence 345677889999999999999999999999999999999999999987542100
Q ss_pred chHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHH
Q 021229 180 PGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELG 259 (315)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~ 259 (315)
... . ..+.++++|+|+|+|++|.++|.+.
T Consensus 140 ----------------------~~~-~---------------------------~~~~~i~~P~Lii~G~~D~~~~~~~- 168 (208)
T d1imja_ 140 ----------------------KIN-A---------------------------ANYASVKTPALIVYGDQDPMGQTSF- 168 (208)
T ss_dssp ----------------------GSC-H---------------------------HHHHTCCSCEEEEEETTCHHHHHHH-
T ss_pred ----------------------ccc-c---------------------------ccccccccccccccCCcCcCCcHHH-
Confidence 000 0 0124578999999999999988653
Q ss_pred HHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 260 RRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 260 ~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
...+.+ +++++.+++++||.+++|+|++|++.|.+||++
T Consensus 169 -~~~~~~-~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 169 -EHLKQL-PNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp -HHHTTS-SSEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred -HHHHhC-CCCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 344556 689999999999999999999999999999985
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=100.00 E-value=1.6e-32 Score=233.69 Aligned_cols=265 Identities=16% Similarity=0.117 Sum_probs=166.1
Q ss_pred ceeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC--CCCCch
Q 021229 23 GFRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR--PERSES 100 (315)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~~~~ 100 (315)
.+.+.++++.||.+++|... |++++||||||||+++++. .|..+...|+++|+|+++|+||||.|+... ..++..
T Consensus 10 p~~~~~v~~~dG~~i~y~~~--G~~~g~pvvllHG~~~~~~-~w~~~~~~l~~~~~vi~~D~rG~G~S~~~~~~~~~~~~ 86 (313)
T d1wm1a_ 10 AYDSGWLDTGDGHRIYWELS--GNPNGKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTW 86 (313)
T ss_dssp CSEEEEEECSSSCEEEEEEE--ECTTSEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECCTTSTTCBSTTCCTTCSHH
T ss_pred CCcCCEEEeCCCcEEEEEEe--cCCCCCeEEEECCCCCccc-chHHHHHHhhcCCEEEEEeCCCcccccccccccccchh
Confidence 46677899999999999886 3456789999999999885 699999999999999999999999997543 234455
Q ss_pred hHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhh--hhc--ccc-hhhh----
Q 021229 101 FQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDR--MFK--VSD-LEEA---- 171 (315)
Q Consensus 101 ~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~--~~~--~~~-~~~~---- 171 (315)
..++++.++++.+++++++++||||||.+++.+|..+|++|.++++++............. ... ... ....
T Consensus 87 ~~~~d~~~~~~~~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T d1wm1a_ 87 HLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSIL 166 (313)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTS
T ss_pred hHHHHHHhhhhccCCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhhh
Confidence 6688899999999999999999999999999999999999999998875443211000000 000 000 0000
Q ss_pred ------------hhhccCCCchHHHHHHHh-hh--ccCCCCC---CCCcchhHHHHHHHHHHHHHHHHHhhhccCcc---
Q 021229 172 ------------SKILVPQSPGKLKELMRY-TF--FKRPPLS---LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKD--- 230 (315)
Q Consensus 172 ------------~~~~~~~~~~~~~~~~~~-~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 230 (315)
.................. .. ....... ................ ..............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 244 (313)
T d1wm1a_ 167 SDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFAR--IENHYFTHLGFLESDDQ 244 (313)
T ss_dssp CTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHH--HHHHHHHTGGGCSSTTH
T ss_pred hhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhh--hhhhhhhhhcccccchh
Confidence 000000000000000000 00 0000000 0000001111100000 00000000111111
Q ss_pred ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHH
Q 021229 231 RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 231 ~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
........+++|+++|+|++|.++|++.++.+++.+ +++++++++++||.+ ++|+.++++|.
T Consensus 245 ~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~-p~a~~~~i~~aGH~~--~eP~~~~~lv~ 306 (313)
T d1wm1a_ 245 LLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAW-PEAELHIVEGAGHSY--DEPGILHQLMI 306 (313)
T ss_dssp HHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHC-TTSEEEEETTCCSST--TSHHHHHHHHH
T ss_pred hhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHC-CCCEEEEECCCCCCc--CCchHHHHHHH
Confidence 122345568999999999999999999999999999 799999999999965 46877765543
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=100.00 E-value=2.3e-33 Score=237.59 Aligned_cols=262 Identities=15% Similarity=0.164 Sum_probs=155.1
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCC----chhH
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERS----ESFQ 102 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~----~~~~ 102 (315)
+.+++ ||.++||... +++|+||||||++++.. .|.++++.|+++|+|+++|+||||.|+....... ....
T Consensus 11 ~fi~~-~g~~i~y~~~----G~g~~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~ 84 (298)
T d1mj5a_ 11 KFIEI-KGRRMAYIDE----GTGDPILFQHGNPTSSY-LWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERYAYAEH 84 (298)
T ss_dssp EEEEE-TTEEEEEEEE----SCSSEEEEECCTTCCGG-GGTTTGGGGTTSSEEEEECCTTSTTSCCCSSCSTTSSCHHHH
T ss_pred EEEEE-CCEEEEEEEE----cCCCcEEEECCCCCCHH-HHHHHHHHHhcCCEEEEEeCCCCCCCCCCccccccccccchh
Confidence 46777 6889999885 24689999999999885 6999999999999999999999999976433222 1222
Q ss_pred HHHHHHHH-HHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc-cc--chhhhhhhccCC
Q 021229 103 AECVMRVM-EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK-VS--DLEEASKILVPQ 178 (315)
Q Consensus 103 a~~~~~~l-~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 178 (315)
.+++..++ +..+.++++||||||||.+++.++.++|++|.+++++++............... .. ............
T Consensus 85 ~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (298)
T d1mj5a_ 85 RDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVLQ 164 (298)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHTT
T ss_pred hhhhccccccccccccCeEEEecccchhHHHHHHHHHhhhheeeccccccccccchhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 33334443 445678999999999999999999999999999999876543322110000000 00 000000000000
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHH--HHHHHHHHhhh-ccCc----------cccccccccCCCCeEE
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCT--EYLEEKRELVR-AIPK----------DRKISNIDKITQPTLI 245 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~----------~~~~~~l~~i~~P~lv 245 (315)
................ ........+...... ........... .... ......+..+++|+++
T Consensus 165 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 239 (298)
T d1mj5a_ 165 DNVFVEQVLPGLILRP-----LSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLF 239 (298)
T ss_dssp TCHHHHTHHHHTSSSC-----CCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred hhhhhhhhcccccccc-----chhhhhhhhhhhhccchhhhhhhhhhhhhhhhcchhhhhhhhhhhhhhhhhhcceeEEE
Confidence 0000000000000000 000000000000000 00000000000 0000 0012235678999999
Q ss_pred EEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 246 LWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 246 i~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
++|++|.+.+. ..+.+.+.+ ++++++++ ++||++++|+|++|++.|.+||++..
T Consensus 240 i~g~~d~~~~~-~~~~~~~~~-p~~~~~~~-~~GH~~~~e~P~~v~~~i~~fl~~~~ 293 (298)
T d1mj5a_ 240 INAEPGALTTG-RMRDFCRTW-PNQTEITV-AGAHFIQEDSPDEIGAAIAAFVRRLR 293 (298)
T ss_dssp EEEEECSSSSH-HHHHHHTTC-SSEEEEEE-EESSCGGGTCHHHHHHHHHHHHHHHS
T ss_pred EecCCCCcChH-HHHHHHHHC-CCCEEEEe-CCCCchHHhCHHHHHHHHHHHHhhhc
Confidence 99999987764 567788887 67777665 67999999999999999999998753
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=100.00 E-value=5.9e-33 Score=230.16 Aligned_cols=237 Identities=20% Similarity=0.225 Sum_probs=152.2
Q ss_pred cEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCC-CCCCCchhHHHHHHHHHHHcC-CCceEEEEEchhH
Q 021229 51 DLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTT-RPERSESFQAECVMRVMEAHS-VKKLSLVGLSYGG 127 (315)
Q Consensus 51 ~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~~~l~~l~-~~~v~lvGhSmGG 127 (315)
-.|||||++.++. .|+.+++.|.+. |+|+++|+||||.|+.+ ...++...+++++.+++++++ .++++|+||||||
T Consensus 4 ~~vliHG~~~~~~-~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lvGhS~Gg 82 (256)
T d3c70a1 4 HFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGG 82 (256)
T ss_dssp EEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHHSCTTCCEEEEEETTHH
T ss_pred cEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCCCCHHHHHHHhhhhhhhhccccceeecccchHH
Confidence 3689999998874 799999999765 99999999999999754 344566677889999988875 7889999999999
Q ss_pred HHHHHHHHhhhhhhceeEEeeCCCccCchhh---hhhhhc-ccchhhhh-hhccCCC-----chHHHHHHHhhhccCCCC
Q 021229 128 FVGYSMAAQFKEKIEKVVICCSGVCLEEQDL---RDRMFK-VSDLEEAS-KILVPQS-----PGKLKELMRYTFFKRPPL 197 (315)
Q Consensus 128 ~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~ 197 (315)
.+++.++.++|++|+++|++++......... ...... ........ ....... ............+....
T Consensus 83 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 161 (256)
T d3c70a1 83 LNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCG- 161 (256)
T ss_dssp HHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHHHHHTSTTSC-
T ss_pred HHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhccccccchhhhhhhhhhhhhhhhcc-
Confidence 9999999999999999999986543321110 000000 00000000 0000000 00000011111110000
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh-hccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEc
Q 021229 198 SLVPSCLLSDYIDAMCTEYLEEKRELV-RAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIK 276 (315)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~ 276 (315)
..+. .. ........... ..............+++|+++|+|++|.++|++..+.+.+.+ +++++++++
T Consensus 162 -------~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~ 230 (256)
T d3c70a1 162 -------PEEY--EL-AKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENY-KPDKVYKVE 230 (256)
T ss_dssp -------HHHH--HH-HHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHS-CCSEEEECC
T ss_pred -------hhhH--HH-hhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHHHHC-CCCEEEEEC
Confidence 0000 00 00000000000 000011122234457899999999999999999999999998 689999999
Q ss_pred CCCCccccCChHHHHHHHHHHHhc
Q 021229 277 KAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 277 ~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++||++++|+|+++++.|.+|+++
T Consensus 231 ~agH~~~~e~P~~~~~~l~~~~~~ 254 (256)
T d3c70a1 231 GGDHKLQLTKTKEIAEILQEVADT 254 (256)
T ss_dssp SCCSCHHHHSHHHHHHHHHHHHHH
T ss_pred CCCCchHHhCHHHHHHHHHHHHHh
Confidence 999999999999999999999875
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00 E-value=2.3e-33 Score=232.21 Aligned_cols=238 Identities=19% Similarity=0.181 Sum_probs=153.6
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCC-CCCCCchhHHHHHHHHHHHcCC-CceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTT-RPERSESFQAECVMRVMEAHSV-KKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~~~l~~l~~-~~v~lvGhSm 125 (315)
+++||||||+++++. .|..+++.|++. |+|+++|+||||.|+.+ ....+...++.++..+++.... ++++++||||
T Consensus 2 G~~vvllHG~~~~~~-~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvghS~ 80 (258)
T d1xkla_ 2 GKHFVLVHGACHGGW-SWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL 80 (258)
T ss_dssp CCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT
T ss_pred CCcEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCcchHHHHHHHhhhhhcccccccccccccch
Confidence 568999999998885 699999999865 99999999999999754 3344555567777888887764 6899999999
Q ss_pred hHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh---hhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 126 GGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR---DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 126 GG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||.+++.++.++|+++.++|++++.......... ................. .............
T Consensus 81 Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 147 (258)
T d1xkla_ 81 GGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQF-------------LPYGSPEEPLTSM 147 (258)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEE-------------EECSCTTSCCEEE
T ss_pred hHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhh-------------hhhhhhhhhcccc
Confidence 9999999999999999999999765433211100 00000000000000000 0000000000000
Q ss_pred chhHHHHHHHHH-----HHHHHHHHhhh-------ccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCc
Q 021229 203 CLLSDYIDAMCT-----EYLEEKRELVR-------AIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNA 270 (315)
Q Consensus 203 ~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~ 270 (315)
....+....... ........... .+........+..+++|+++|+|++|.++|++..+.+++.+ +++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~ 226 (258)
T d1xkla_ 148 FFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNI-GVT 226 (258)
T ss_dssp ECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHH-CCS
T ss_pred cccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHHHHHHHHC-CCC
Confidence 000000000000 00000000000 00011123345678899999999999999999999999998 689
Q ss_pred EEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 271 QLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 271 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++++++++||++++|+|+++++.|.+|+++-
T Consensus 227 ~~~~i~~~gH~~~~e~P~~~~~~l~e~~~k~ 257 (258)
T d1xkla_ 227 EAIEIKGADHMAMLCEPQKLCASLLEIAHKY 257 (258)
T ss_dssp EEEEETTCCSCHHHHSHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCchHHhCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999763
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.98 E-value=4.8e-32 Score=224.93 Aligned_cols=254 Identities=16% Similarity=0.177 Sum_probs=143.0
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCch-hHHHHHHHHHH
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSES-FQAECVMRVME 111 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~-~~a~~~~~~l~ 111 (315)
+.++||..+ ++++|+||||||+++++. .|.++++.|++ +|+|+++|+||||.|.......... ..+.+......
T Consensus 4 ~~~lh~~~~---~~~~P~ivllHG~~~~~~-~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 79 (264)
T d1r3da_ 4 SNQLHFAKP---TARTPLVVLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAH 79 (264)
T ss_dssp CEEEESSCC---BTTBCEEEEECCTTCCGG-GGHHHHHHHTTSSCEEEEECCTTCSSCC-------CHHHHHHHHHHHTT
T ss_pred CCeEEEcCC---CCCCCeEEEeCCCCCCHH-HHHHHHHHHHhCCCEEEEEecccccccccccccccchhhhhhhhccccc
Confidence 346777553 345688999999998885 69999999975 6999999999999997544322222 22333333334
Q ss_pred HcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCc-hhhhhhhhcccchhhhhhhccCCCchHHHHHHHhh
Q 021229 112 AHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEE-QDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYT 190 (315)
Q Consensus 112 ~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (315)
..+.++++|+||||||.+++.++.++|+.+.+++++........ ......................... ..... .
T Consensus 80 ~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~ 155 (264)
T d1r3da_ 80 VTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPI---EHVLS-D 155 (264)
T ss_dssp CCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCH---HHHHH-H
T ss_pred ccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhhhhhh---hhhhh-h
Confidence 45678999999999999999999999999999887654322211 1000000000000000000000000 00000 0
Q ss_pred hccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc---cCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC
Q 021229 191 FFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRA---IPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG 267 (315)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~ 267 (315)
.................................... .........+..+++|+++|+|++|..++ .+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-----~~~~~-- 228 (264)
T d1r3da_ 156 WYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAES-- 228 (264)
T ss_dssp HTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHH--
T ss_pred hhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH-----HHHhc--
Confidence 000000000111111111111111001111111111 11111234567889999999999996542 33333
Q ss_pred CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 268 DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 268 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
+++++++++++||++++|+|++|++.|.+||++..
T Consensus 229 ~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~~l~ 263 (264)
T d1r3da_ 229 SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCeEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 47899999999999999999999999999998653
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.97 E-value=4.4e-31 Score=234.98 Aligned_cols=269 Identities=13% Similarity=0.111 Sum_probs=166.2
Q ss_pred eeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhcccc-------ceEEeecCCCCCCCCCCC--CCC
Q 021229 27 SVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHY-------FNVYVPDLLFFGDSFTTR--PER 97 (315)
Q Consensus 27 ~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-------~~vi~~D~~G~G~S~~~~--~~~ 97 (315)
..+++ ||..+||....+++++++||||||||+++.. .|.++++.|++. |+||++|+||||.|+.+. ..+
T Consensus 85 f~~~i-~G~~iHf~h~~~~~~~~~pLlLlHG~P~s~~-~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~~~~~y 162 (394)
T d1qo7a_ 85 FTTEI-EGLTIHFAALFSEREDAVPIALLHGWPGSFV-EFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPLDKDF 162 (394)
T ss_dssp EEEEE-TTEEEEEEEECCSCTTCEEEEEECCSSCCGG-GGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCCSSSCC
T ss_pred eEEEE-CCEEEEEEEEeccCCCCCEEEEeccccccHH-HHHHHHHhhccccCCcccceeeecccccccCCCCCCCCCCcc
Confidence 34555 6999999876666677889999999999985 799999999875 999999999999998653 356
Q ss_pred CchhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh--hhh-hhhcccchhhhh--
Q 021229 98 SESFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD--LRD-RMFKVSDLEEAS-- 172 (315)
Q Consensus 98 ~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~-~~~~~~~~~~~~-- 172 (315)
+....++++..+++.++.++++++|||+||.++..++..+|+.+.++++++.+....... ... ............
T Consensus 163 ~~~~~a~~~~~l~~~lg~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T d1qo7a_ 163 GLMDNARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLCAMRAPPEGPSIESLSAAEKEGIARMEKF 242 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCCSCSSSCCGGGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhccCcceEEEEecCchhHHHHHHHHhhccccceeEeeecccccccccccccchhhhHHHHHHHHHH
Confidence 677789999999999999999999999999999999999999999998876543322110 000 000000000000
Q ss_pred ------------------hhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHH-HHHHHHHHH-hhhccCcc--
Q 021229 173 ------------------KILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMC-TEYLEEKRE-LVRAIPKD-- 230 (315)
Q Consensus 173 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~-- 230 (315)
.......+..........+...... ......+.+.+.... ......... ........
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 321 (394)
T d1qo7a_ 243 MTDGLAYAMEHSTRPSTIGHVLSSSPIALLAWIGEKYLQWVDK-PLPSETILEMVSLYWLTESFPRAIHTYRETTPTASA 321 (394)
T ss_dssp HHHSCHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHSCSS-CCCHHHHHHHHHHHHHTTCHHHHGGGHHHHCC----
T ss_pred HHhhhhhhhhhhhhhhhhhhhcccccchhhhHHHHHhhhcccc-cCCHHHHHHHHHHHhhccccchhHHHHHHHhhcccc
Confidence 0000000101111111111110000 001100111111000 000000000 00111110
Q ss_pred ----ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 231 ----RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 231 ----~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.......+|++||++++|++|...+++ .+.+.+....++.++++|||++++|+|+++++.|.+|+++.
T Consensus 322 ~~~~~~~~~~~~i~vPtlv~~g~~D~~~~p~---~~~~~~~~~~~~~~~~~~GHf~~~E~Pe~~a~~I~~Fl~~v 393 (394)
T d1qo7a_ 322 PNGATMLQKELYIHKPFGFSFFPKDLCPVPR---SWIATTGNLVFFRDHAEGGHFAALERPRELKTDLTAFVEQV 393 (394)
T ss_dssp -----CTTTTTCEEEEEEEEECTBSSSCCCH---HHHGGGEEEEEEEECSSCBSCHHHHCHHHHHHHHHHHHHHH
T ss_pred cchhhhhccCCcccCCeEEEEeCCCccccHH---HHHHhccCceEEEEcCCcCCchHHhCHHHHHHHHHHHHHHh
Confidence 112234568899999999999887664 34555533356788999999999999999999999999864
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.97 E-value=5.6e-29 Score=218.40 Aligned_cols=273 Identities=13% Similarity=0.061 Sum_probs=157.1
Q ss_pred eeeeeecCCCceEEEEEec------CCCCCCCcEEEEccCCCChhhhHHhh------Hhhcc-ccceEEeecCCCCCCCC
Q 021229 25 RSSVTDLQDGSVMHCWVPK------TRNDSKPDLVLIHGLGANALWQWTNI------IPHMI-HYFNVYVPDLLFFGDSF 91 (315)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~------~~~~~~~~vvllHG~~~~~~~~w~~~------~~~l~-~~~~vi~~D~~G~G~S~ 91 (315)
....+++.||..+.++..+ ...+.+|+|||+||+++++. .|... +..|. ++|+|+++|+||||.|.
T Consensus 28 e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~-~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~ 106 (377)
T d1k8qa_ 28 EEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASAT-NWISNLPNNSLAFILADAGYDVWLGNSRGNTWAR 106 (377)
T ss_dssp EEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGG-GGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSC
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchh-HHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCC
Confidence 4567899999877665432 13456789999999998885 68654 33443 45999999999999996
Q ss_pred CCCC---------CCCc-----hhHHHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCch-
Q 021229 92 TTRP---------ERSE-----SFQAECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQ- 156 (315)
Q Consensus 92 ~~~~---------~~~~-----~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~- 156 (315)
.+.. ..+. .+.++.+..+++.++.++++|+||||||++++.+|.++|+.+++++++.........
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~ 186 (377)
T d1k8qa_ 107 RNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVK 186 (377)
T ss_dssp EESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCS
T ss_pred CCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHHcCCCCEEEEEecchHHHHHHHHHhhhhhhhhceeEeecccccccc
Confidence 4221 1111 123455677778889999999999999999999999999999998876532211100
Q ss_pred ---hhhhhhhcccch-----------------hhhhh--hccCCCch-HHHHHHHhhhccCCCCCCCCcchhHHH-----
Q 021229 157 ---DLRDRMFKVSDL-----------------EEASK--ILVPQSPG-KLKELMRYTFFKRPPLSLVPSCLLSDY----- 208 (315)
Q Consensus 157 ---~~~~~~~~~~~~-----------------~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 208 (315)
............ ..... ........ ............... .........+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 264 (377)
T d1k8qa_ 187 YTETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTM--NLNMSRLDVYLSHNP 264 (377)
T ss_dssp SCCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGG--GSCGGGHHHHHTTCC
T ss_pred chhhHHHHHHhcchhhhhhhhhhhhccchhHHHHhhhhhhcchhhhhHHHHhhhhhhcCCCcc--cccHHHhhhhhhccc
Confidence 000000000000 00000 00000000 000000000000000 0000000000
Q ss_pred -------HHHHHHHHHH----------HHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcE
Q 021229 209 -------IDAMCTEYLE----------EKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQ 271 (315)
Q Consensus 209 -------~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~ 271 (315)
.......... ...+.............+.+|++|+|+|+|++|.+++++..+.+.+.++...+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~vPvL~i~G~~D~~~~~~~~~~l~~~lp~~~~ 344 (377)
T d1k8qa_ 265 AGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNLIY 344 (377)
T ss_dssp CCEEHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTEEE
T ss_pred ccchHHHHHHHHHHHhcCcchhccchhhhhhhhhhcccCchhhhHhhCCCCEEEEEeCCCCccCHHHHHHHHHHCCCCeE
Confidence 0000000000 00000000001112335678999999999999999999999999999943347
Q ss_pred EEEEcCCCCcc---ccCChHHHHHHHHHHHhc
Q 021229 272 LIVIKKAGHAF---NYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 272 ~~~i~~~gH~~---~~e~p~~~~~~i~~fl~~ 300 (315)
.++++++||+. -.+.+++++..|.+||++
T Consensus 345 ~~~i~~~GH~d~~~~~~a~~~v~~~I~~fl~~ 376 (377)
T d1k8qa_ 345 HRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGT 376 (377)
T ss_dssp EEEETTCCTTHHHHCTTHHHHTHHHHHHHHHT
T ss_pred EEEeCCCCCcchhhccchHHHHHHHHHHHHhc
Confidence 88999999973 336689999999999985
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=4.4e-29 Score=204.15 Aligned_cols=226 Identities=14% Similarity=0.218 Sum_probs=144.2
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhH---HHHHHHHHHHcCCCceEEEEE
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQ---AECVMRVMEAHSVKKLSLVGL 123 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~---a~~~~~~l~~l~~~~v~lvGh 123 (315)
++++||||||++++.. .|..+++.|++. |+|+++|+||||.|............ ...+...++..+.++++|+||
T Consensus 10 ~~~~vvliHG~~~~~~-~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 88 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSA-DVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKNKGYEKIAVAGL 88 (242)
T ss_dssp SSCEEEEECCTTCCTH-HHHHHHHHHHHTTCEEEECCCTTSSSCHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEeCCCCccccccccccchhHHHHHHHHHHhhhhhcccCceEEEEc
Confidence 4568999999999886 699999999764 99999999999998643333332222 233444556678899999999
Q ss_pred chhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhh-hhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCc
Q 021229 124 SYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLR-DRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPS 202 (315)
Q Consensus 124 SmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (315)
||||.+++.++.++|.. .+++++++......... ...... ..... ................ .... . ..
T Consensus 89 S~Gg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~-~~~~-~----~~ 157 (242)
T d1tqha_ 89 SLGGVFSLKLGYTVPIE--GIVTMCAPMYIKSEETMYEGVLEY--AREYK-KREGKSEEQIEQEMEK-FKQT-P----MK 157 (242)
T ss_dssp THHHHHHHHHHTTSCCS--CEEEESCCSSCCCHHHHHHHHHHH--HHHHH-HHHTCCHHHHHHHHHH-HTTS-C----CT
T ss_pred chHHHHhhhhcccCccc--ccccccccccccchhHHHHHHHHH--HHHHh-hhccchhhhHHHHHhh-hhhh-c----cc
Confidence 99999999999999864 45555554433322100 000000 00000 0000000111111000 0000 0 00
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-CCcEEEEEcCCCCc
Q 021229 203 CLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG-DNAQLIVIKKAGHA 281 (315)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-~~~~~~~i~~~gH~ 281 (315)
......... . .....+..+++|+|+++|++|.++|++.++.+.+.+. +++++++++++||+
T Consensus 158 -~~~~~~~~~--------~---------~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 219 (242)
T d1tqha_ 158 -TLKALQELI--------A---------DVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHV 219 (242)
T ss_dssp -THHHHHHHH--------H---------HHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCSSEEEEEETTCCSS
T ss_pred -hhhcccccc--------c---------ccccccceeccccceeecccCCccCHHHHHHHHHHcCCCCcEEEEECCCCCc
Confidence 000000000 0 0123456789999999999999999999999998874 56899999999999
Q ss_pred cccC-ChHHHHHHHHHHHhcCCC
Q 021229 282 FNYE-KPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 282 ~~~e-~p~~~~~~i~~fl~~~~~ 303 (315)
++.| +|+++++.|.+||++..+
T Consensus 220 ~~~~~~~~~~~~~i~~Fl~~l~~ 242 (242)
T d1tqha_ 220 ITLDQEKDQLHEDIYAFLESLDW 242 (242)
T ss_dssp GGGSTTHHHHHHHHHHHHHHSCC
T ss_pred CccccCHHHHHHHHHHHHHhCCC
Confidence 9987 589999999999997643
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.1e-29 Score=211.67 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=87.3
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhccc---cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEch
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIH---YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSY 125 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~---~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSm 125 (315)
++|||||||++++.. .|..+++.|.+ .|+|+++|+||||.|..+ ..++...+++++.+++++++ ++++|+||||
T Consensus 2 ~~PvvllHG~~~~~~-~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~-~~~~~~~~~~~l~~~l~~l~-~~~~lvGhS~ 78 (268)
T d1pjaa_ 2 YKPVIVVHGLFDSSY-SFRHLLEYINETHPGTVVTVLDLFDGRESLRP-LWEQVQGFREAVVPIMAKAP-QGVHLICYSQ 78 (268)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-HHHHHHHHHHHHHHHHHHCT-TCEEEEEETH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc-cccCHHHHHHHHHHHHhccC-CeEEEEcccc
Confidence 568999999999886 69999999976 499999999999999754 33455567899999999998 9999999999
Q ss_pred hHHHHHHHHHhhhh-hhceeEEeeCCC
Q 021229 126 GGFVGYSMAAQFKE-KIEKVVICCSGV 151 (315)
Q Consensus 126 GG~ia~~~a~~~p~-~v~~lil~~~~~ 151 (315)
||.+|+.+|.++|+ +|+++|+++++.
T Consensus 79 GG~ia~~~a~~~p~~~v~~lvl~~~~~ 105 (268)
T d1pjaa_ 79 GGLVCRALLSVMDDHNVDSFISLSSPQ 105 (268)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred HHHHHHHHHHHCCccccceEEEECCCC
Confidence 99999999999998 699999987643
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.95 E-value=2.1e-27 Score=203.43 Aligned_cols=230 Identities=12% Similarity=0.173 Sum_probs=140.1
Q ss_pred eeeeecCCCceEEEEEecCC---CCCCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCC-CCCCCCCCCCCch
Q 021229 26 SSVTDLQDGSVMHCWVPKTR---NDSKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFF-GDSFTTRPERSES 100 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~---~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~-G~S~~~~~~~~~~ 100 (315)
.+.+++.||..+++|...+. +..+++||++||++.+.. .|..+++.|.++ |+|+++|+||| |.|+......+..
T Consensus 6 ~h~~~~~dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~-~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~~~~~~ 84 (302)
T d1thta_ 6 AHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMD-HFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMT 84 (302)
T ss_dssp EEEEEETTTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGG-GGHHHHHHHHTTTCCEEEECCCBCC--------CCCHH
T ss_pred eeEEEcCCCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccCCCHH
Confidence 35678899999999986542 234568999999998876 589999998875 99999999998 8886544445544
Q ss_pred hHHHHHH---HHHHHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccC
Q 021229 101 FQAECVM---RVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVP 177 (315)
Q Consensus 101 ~~a~~~~---~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (315)
...+++. +.++..+.++++|+||||||.+++.+|.. ..++++|+.++...... ........ ..+
T Consensus 85 ~~~~dl~~vi~~l~~~~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~~--~~~~~~~~---------~~~ 151 (302)
T d1thta_ 85 TGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLRD--TLEKALGF---------DYL 151 (302)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHHH--HHHHHHSS---------CGG
T ss_pred HHHHHHHHHHHhhhccCCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHHH--HHHHHHhh---------ccc
Confidence 4444444 55555678899999999999999998864 35788887654432211 00000000 000
Q ss_pred CCchHHHHHHHhhhccCCCCC--CCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCc
Q 021229 178 QSPGKLKELMRYTFFKRPPLS--LVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFP 255 (315)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 255 (315)
.. .....+... .........+......... . ........+.++++|+|+++|++|.++|
T Consensus 152 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~i~~PvLii~G~~D~~V~ 212 (302)
T d1thta_ 152 SL----------PIDELPNDLDFEGHKLGSEVFVRDCFEHHW----D-----TLDSTLDKVANTSVPLIAFTANNDDWVK 212 (302)
T ss_dssp GS----------CGGGCCSEEEETTEEEEHHHHHHHHHHTTC----S-----SHHHHHHHHTTCCSCEEEEEETTCTTSC
T ss_pred hh----------hhhhccccccccccchhhHHHHHHHHHhHH----H-----HHHHHHHHHhhcCCCEEEEEeCCCCccC
Confidence 00 000000000 0000011111111110000 0 0000123456899999999999999999
Q ss_pred hHHHHHHHhhcC-CCcEEEEEcCCCCccccCChHH
Q 021229 256 LELGRRLKSHLG-DNAQLIVIKKAGHAFNYEKPKE 289 (315)
Q Consensus 256 ~~~~~~l~~~~~-~~~~~~~i~~~gH~~~~e~p~~ 289 (315)
++.++.+.+.++ +++++++++|+||.+. |+|+.
T Consensus 213 ~~~~~~l~~~i~s~~~kl~~~~g~~H~l~-e~~~~ 246 (302)
T d1thta_ 213 QEEVYDMLAHIRTGHCKLYSLLGSSHDLG-ENLVV 246 (302)
T ss_dssp HHHHHHHHTTCTTCCEEEEEETTCCSCTT-SSHHH
T ss_pred HHHHHHHHHhCCCCCceEEEecCCCcccc-cChHH
Confidence 999999999875 4689999999999875 55643
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.92 E-value=1.3e-23 Score=183.94 Aligned_cols=228 Identities=19% Similarity=0.201 Sum_probs=145.7
Q ss_pred eeecCCCceEEEEEec-CCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCC-CchhHHH
Q 021229 28 VTDLQDGSVMHCWVPK-TRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPER-SESFQAE 104 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~-~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~-~~~~~a~ 104 (315)
.+.. +|.++..+... .+.++.|+||++||++++.. .|..+...|.+ +|.|+++|+||||+|....... .......
T Consensus 110 ~ip~-dg~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e-~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~~~~~~~~~~~ 187 (360)
T d2jbwa1 110 ELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKE-ESFQMENLVLDRGMATATFDGPGQGEMFEYKRIAGDYEKYTS 187 (360)
T ss_dssp EEEE-TTEEEEEEEECCSSSCCEEEEEEECCSSCCTT-TTHHHHHHHHHTTCEEEEECCTTSGGGTTTCCSCSCHHHHHH
T ss_pred ecCc-CCcccceEEEecCCCCCceEEEEeCCCCccHH-HHHHHHHHHHhcCCEEEEEccccccccCccccccccHHHHHH
Confidence 3443 67777776543 33445678999999988765 36666666664 5999999999999996433222 2223345
Q ss_pred HHHHHHHHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 105 CVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 105 ~~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
.+.+++.... .++|.|+||||||.+|+.+|...| +++++|.+++......... ..+
T Consensus 188 ~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~~~~~~~~~-------------------~~~- 246 (360)
T d2jbwa1 188 AVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGFSDLDYWDL-------------------ETP- 246 (360)
T ss_dssp HHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCSCSTTGGG-------------------SCH-
T ss_pred HHHHHHHhcccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEcccccHHHHhh-------------------hhh-
Confidence 5666666553 468999999999999999999887 6888887655432221100 000
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
.....+..... ... ..+... .....+ .....+.+|++|+|+|+|++|+ +|.+.++.
T Consensus 247 ~~~~~~~~~~~-------~~~--~~~~~~-----------~~~~~~---~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~ 302 (360)
T d2jbwa1 247 LTKESWKYVSK-------VDT--LEEARL-----------HVHAAL---ETRDVLSQIACPTYILHGVHDE-VPLSFVDT 302 (360)
T ss_dssp HHHHHHHHHTT-------CSS--HHHHHH-----------HHHHHT---CCTTTGGGCCSCEEEEEETTSS-SCTHHHHH
T ss_pred hhhHHHHHhcc-------CCc--hHHHHH-----------HHHhhc---chhhhHhhCCCCEEEEEeCCCC-cCHHHHHH
Confidence 00111111100 000 001000 000011 1223567899999999999998 58899999
Q ss_pred HHhhcC-CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCC
Q 021229 262 LKSHLG-DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 262 l~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
+.+.++ ++.+++++++++|.. .+.+.+....|.+||.+.+.
T Consensus 303 l~~~~~~~~~~l~~~~~g~H~~-~~~~~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 303 VLELVPAEHLNLVVEKDGDHCC-HNLGIRPRLEMADWLYDVLV 344 (360)
T ss_dssp HHHHSCGGGEEEEEETTCCGGG-GGGTTHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCCeEEEEECCCCcCC-CcChHHHHHHHHHHHHHHhc
Confidence 998874 246788889999964 45677888899999987654
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.8e-24 Score=177.04 Aligned_cols=211 Identities=13% Similarity=0.040 Sum_probs=130.2
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc-CCCceEEEEEc
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH-SVKKLSLVGLS 124 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l-~~~~v~lvGhS 124 (315)
.+.+++||||||++++.. .|.++.+.|. .|.|+++|++|+|++ +++..+.+.++ +.++++|+|||
T Consensus 14 ~~~~~~l~~lhg~~g~~~-~~~~la~~L~-~~~v~~~~~~g~~~~------------a~~~~~~i~~~~~~~~~~lvGhS 79 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGL-MYQNLSSRLP-SYKLCAFDFIEEEDR------------LDRYADLIQKLQPEGPLTLFGYS 79 (230)
T ss_dssp TTCSEEEEEECCTTCCGG-GGHHHHHHCT-TEEEEEECCCCSTTH------------HHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCCCCeEEEEcCCCCCHH-HHHHHHHHCC-CCEEeccCcCCHHHH------------HHHHHHHHHHhCCCCcEEEEeec
Confidence 455779999999999885 6999999995 699999999998743 34444455554 56789999999
Q ss_pred hhHHHHHHHHHhhhhhhceeEEee---CCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 125 YGGFVGYSMAAQFKEKIEKVVICC---SGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 125 mGG~ia~~~a~~~p~~v~~lil~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
|||.+|+++|.++|+++..++.+. +........... .. ..... ..+.... .... ...
T Consensus 80 ~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~-~~------------~~~~~----~~~~~~~-~~~~--~~~ 139 (230)
T d1jmkc_ 80 AGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDG-RT------------VESDV----EALMNVN-RDNE--ALN 139 (230)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC---------------------CCH----HHHHHHT-TTCS--GGG
T ss_pred cChHHHHHHHHhhhhhCccceeeecccccCccchhhhhh-hh------------hhhhh----hhhhhcc-cccc--ccc
Confidence 999999999999998876665432 221111000000 00 00000 0111111 1100 001
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
....... +..... ..... .........+++|+++|+|++|..++.... .+.+....+.++++++ +||+
T Consensus 140 ~~~~~~~---~~~~~~----~~~~~---~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~~~~~~~~i~-g~H~ 207 (230)
T d1jmkc_ 140 SEAVKHG---LKQKTH----AFYSY---YVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATTGAYRMKRGF-GTHA 207 (230)
T ss_dssp SHHHHHH---HHHHHH----HHHHH---HHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBSSCEEEEECS-SCGG
T ss_pred cHHHHHH---HHHHHH----HHHHh---hhcccccccccCcceeeeecCCcccchhHH-HHHHhccCCcEEEEEc-CCCh
Confidence 1111111 111000 00000 001234567899999999999999987644 3445554567888897 5999
Q ss_pred cccCCh--HHHHHHHHHHHhcCC
Q 021229 282 FNYEKP--KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 282 ~~~e~p--~~~~~~i~~fl~~~~ 302 (315)
.++++| +++++.|.+||.+.+
T Consensus 208 ~ml~~~~~~~va~~I~~~L~~~~ 230 (230)
T d1jmkc_ 208 EMLQGETLDRNAGILLEFLNTQT 230 (230)
T ss_dssp GTTSHHHHHHHHHHHHHHHTCBC
T ss_pred hhcCCccHHHHHHHHHHHHhhcC
Confidence 999877 899999999998653
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.92 E-value=4.1e-24 Score=181.02 Aligned_cols=214 Identities=12% Similarity=0.077 Sum_probs=139.6
Q ss_pred CCCCCcEEEEccCC--CChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCC---CCchhHHHHHH-HHHHHcCCCceE
Q 021229 46 NDSKPDLVLIHGLG--ANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPE---RSESFQAECVM-RVMEAHSVKKLS 119 (315)
Q Consensus 46 ~~~~~~vvllHG~~--~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~a~~~~-~~l~~l~~~~v~ 119 (315)
.+..++|||+||+. ++. +.|.++...|...++|+++|+||||.|...... .+...+++.+. .+++..+..+++
T Consensus 57 ~~~~~~l~c~~~~~~~g~~-~~y~~la~~L~~~~~V~al~~pG~~~~~~~~~~~~~~s~~~~a~~~~~~i~~~~~~~P~v 135 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGP-HEFLRLSTSFQEERDFLAVPLPGYGTGTGTGTALLPADLDTALDAQARAILRAAGDAPVV 135 (283)
T ss_dssp -CCCCEEEEECCCCTTCST-TTTHHHHHTTTTTCCEEEECCTTCCBC---CBCCEESSHHHHHHHHHHHHHHHHTTSCEE
T ss_pred CCCCceEEEeCCCCCCCCH-HHHHHHHHhcCCCceEEEEeCCCCCCCCCCccccccCCHHHHHHHHHHHHHHhcCCCceE
Confidence 34568999999853 344 468899999999999999999999988654322 34455566544 466777888999
Q ss_pred EEEEchhHHHHHHHHHhhhh----hhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCC
Q 021229 120 LVGLSYGGFVGYSMAAQFKE----KIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRP 195 (315)
Q Consensus 120 lvGhSmGG~ia~~~a~~~p~----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (315)
|+||||||.||+++|.++++ .|.+++++++........... .. ......+ .....
T Consensus 136 L~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~--~~----------------~~~~~~~---~~~~~ 194 (283)
T d2h7xa1 136 LLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEV--WS----------------RQLGEGL---FAGEL 194 (283)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHH--TH----------------HHHHHHH---HHTCS
T ss_pred EEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhh--hh----------------hhhHHHh---hcccc
Confidence 99999999999999998764 589999998755433221000 00 0000110 01110
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEE
Q 021229 196 PLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVI 275 (315)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i 275 (315)
. .... ..+..+.. ....+. ......+++|+++|+|++|..++.+....+.+..+...+++.+
T Consensus 195 ~--~~~~----~~l~a~~~-----~~~~~~-------~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~~~~~~~v 256 (283)
T d2h7xa1 195 E--PMSD----ARLLAMGR-----YARFLA-------GPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDLPHTVADV 256 (283)
T ss_dssp S--CCCH----HHHHHHHH-----HHHHHH-------SCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSSCSEEEEE
T ss_pred c--cccc----HHHHHHHH-----HHHHHh-------hccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 0 0111 11111100 001111 1124578999999999999999988777777766445789999
Q ss_pred cCCCCcccc-CChHHHHHHHHHHHhc
Q 021229 276 KKAGHAFNY-EKPKEFYKHLKSFLLD 300 (315)
Q Consensus 276 ~~~gH~~~~-e~p~~~~~~i~~fl~~ 300 (315)
++ ||+.++ |+|+.+++.|.+||+.
T Consensus 257 ~G-~H~~ml~e~~~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 257 PG-DHFTMMRDHAPAVAEAVLSWLDA 281 (283)
T ss_dssp SS-CTTHHHHTTHHHHHHHHHHHHHH
T ss_pred cC-CCcccccCCHHHHHHHHHHHHHh
Confidence 86 898654 7799999999999975
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.2e-23 Score=176.18 Aligned_cols=106 Identities=13% Similarity=0.176 Sum_probs=78.4
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHH-HHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAEC-VMRVM 110 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~-~~~~l 110 (315)
++|.++..... .+++++|||||||+++++. .|..+++.| .++|+++|+||||.|++ ....+++ +.+++
T Consensus 10 ~~~~~l~~l~~--~~~~~~Pl~l~Hg~~gs~~-~~~~l~~~L--~~~v~~~d~~g~~~~~~------~~~~a~~~~~~~~ 78 (286)
T d1xkta_ 10 PEGPTLMRLNS--VQSSERPLFLVHPIEGSTT-VFHSLASRL--SIPTYGLQCTRAAPLDS------IHSLAAYYIDCIR 78 (286)
T ss_dssp TTSCSEEECCC--CCCCSCCEEEECCTTCCCG-GGHHHHHTC--SSCEEEECCCTTSCCSC------HHHHHHHHHHHHH
T ss_pred CCCCEEEEecC--CCCCCCeEEEECCCCccHH-HHHHHHHHc--CCeEEEEeCCCCCCCCC------HHHHHHHHHHHHH
Confidence 45655554432 3456678999999999985 699999988 48999999999998852 2234443 45566
Q ss_pred HHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEee
Q 021229 111 EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICC 148 (315)
Q Consensus 111 ~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~ 148 (315)
+..+.++++|+||||||.||+.+|.++|++++++++++
T Consensus 79 ~~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 79 QVQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHCCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HhcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 66788999999999999999999999999998887654
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.90 E-value=3.1e-23 Score=164.45 Aligned_cols=179 Identities=13% Similarity=0.113 Sum_probs=117.9
Q ss_pred cEEEEccCCCChhhh-HHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhHH
Q 021229 51 DLVLIHGLGANALWQ-WTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGGF 128 (315)
Q Consensus 51 ~vvllHG~~~~~~~~-w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG~ 128 (315)
.||||||++++..-. +..+.+.|.. +|+|+++|+||+|.+. .+...+.+.+.++. ..++++|+||||||.
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~~-------~~~~~~~l~~~~~~-~~~~~~lvGhS~Gg~ 74 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQPR-------LEDWLDTLSLYQHT-LHENTYLVAHSLGCP 74 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSCC-------HHHHHHHHHTTGGG-CCTTEEEEEETTHHH
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcch-------HHHHHHHHHHHHhc-cCCCcEEEEechhhH
Confidence 699999998875322 4556677765 4999999999998652 22233333333332 347899999999999
Q ss_pred HHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHH
Q 021229 129 VGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDY 208 (315)
Q Consensus 129 ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (315)
+++.++.++|+.....+++.......... .... . ..+..... . . .
T Consensus 75 ~a~~~a~~~~~~~~~~~l~~~~~~~~~~~---~~~~------~-----------------~~~~~~~~----~---~-~- 119 (186)
T d1uxoa_ 75 AILRFLEHLQLRAALGGIILVSGFAKSLP---TLQM------L-----------------DEFTQGSF----D---H-Q- 119 (186)
T ss_dssp HHHHHHHTCCCSSCEEEEEEETCCSSCCT---TCGG------G-----------------GGGTCSCC----C---H-H-
T ss_pred HHHHHHHhCCccceeeEEeecccccccch---hhhh------h-----------------hhhhcccc----c---c-c-
Confidence 99999999987654444433222111000 0000 0 00000000 0 0 0
Q ss_pred HHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC---
Q 021229 209 IDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE--- 285 (315)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e--- 285 (315)
...+++.|+++|+|++|+++|.+.++.+++.+ ++++++++++||+...+
T Consensus 120 --------------------------~~~~~~~p~lvi~g~~D~~vp~~~~~~l~~~~--~~~~~~~~~~gH~~~~~~~~ 171 (186)
T d1uxoa_ 120 --------------------------KIIESAKHRAVIASKDDQIVPFSFSKDLAQQI--DAALYEVQHGGHFLEDEGFT 171 (186)
T ss_dssp --------------------------HHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT--TCEEEEETTCTTSCGGGTCS
T ss_pred --------------------------ccccCCCCEEEEecCCCCCCCHHHHHHHHHHc--CCEEEEeCCCCCcCccccCc
Confidence 01124579999999999999999999999987 58999999999987654
Q ss_pred ChHHHHHHHHHHHhc
Q 021229 286 KPKEFYKHLKSFLLD 300 (315)
Q Consensus 286 ~p~~~~~~i~~fl~~ 300 (315)
+-.++.+.|.+||.+
T Consensus 172 ~~~~~~~~l~~~~~~ 186 (186)
T d1uxoa_ 172 SLPIVYDVLTSYFSK 186 (186)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHcC
Confidence 335788999999874
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=8.9e-23 Score=160.93 Aligned_cols=173 Identities=19% Similarity=0.212 Sum_probs=132.4
Q ss_pred CCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEEEchhH
Q 021229 49 KPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVGLSYGG 127 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvGhSmGG 127 (315)
.+|||||||++++.. .|..+.+.|.+. |.++.+|.+|+|.+... ........++.+.+++++++.++++||||||||
T Consensus 2 ~~PVv~vHG~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~~~~~~~~v~lvGHSmGG 79 (179)
T d1ispa_ 2 HNPVVMVHGIGGASF-NFAGIKSYLVSQGWSRDKLYAVDFWDKTGT-NYNNGPVLSRFVQKVLDETGAKKVDIVAHSMGG 79 (179)
T ss_dssp CCCEEEECCTTCCGG-GGHHHHHHHHHTTCCGGGEEECCCSCTTCC-HHHHHHHHHHHHHHHHHHHCCSCEEEEEETHHH
T ss_pred CCCEEEECCCCCCHH-HHHHHHHHHHHcCCeEEEEecCCccccccc-cchhhhhHHHHHHHHHHhcCCceEEEEeecCcC
Confidence 468999999999885 699999999766 99999999999988532 222334457778888888999999999999999
Q ss_pred HHHHHHHHhh--hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchh
Q 021229 128 FVGYSMAAQF--KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLL 205 (315)
Q Consensus 128 ~ia~~~a~~~--p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (315)
.++..++.++ |++|+++|+++++...... .. ++.
T Consensus 80 ~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~------------------------------------~~-----l~~--- 115 (179)
T d1ispa_ 80 ANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------------------------------KA-----LPG--- 115 (179)
T ss_dssp HHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------------------------------BC-----CCC---
T ss_pred HHHHHHHHHcCCchhhCEEEEECCCCCCchh------------------------------------hh-----cCC---
Confidence 9999999887 6789999988654211000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccC
Q 021229 206 SDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYE 285 (315)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e 285 (315)
......+|++.|+|+.|.++++..+ .+ +.++.+.++++||.....
T Consensus 116 -----------------------------~~~~~~~~~~~i~~~~D~~v~~~~~-----~l-~~~~~~~~~~~~H~~l~~ 160 (179)
T d1ispa_ 116 -----------------------------TDPNQKILYTSIYSSADMIVMNYLS-----RL-DGARNVQIHGVGHIGLLY 160 (179)
T ss_dssp -----------------------------SCTTCCCEEEEEEETTCSSSCHHHH-----CC-BTSEEEEESSCCTGGGGG
T ss_pred -----------------------------cccccCceEEEEEecCCcccCchhh-----cC-CCceEEEECCCCchhhcc
Confidence 0112357999999999999998653 34 578889999999999888
Q ss_pred ChHHHHHHHHHHHhcCCC
Q 021229 286 KPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 286 ~p~~~~~~i~~fl~~~~~ 303 (315)
+| ++.+.|.+||....+
T Consensus 161 ~~-~v~~~i~~~L~~~~~ 177 (179)
T d1ispa_ 161 SS-QVNSLIKEGLNGGGQ 177 (179)
T ss_dssp CH-HHHHHHHHHHTTTCB
T ss_pred CH-HHHHHHHHHHhccCC
Confidence 88 688999999975443
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.89 E-value=1.9e-21 Score=157.06 Aligned_cols=170 Identities=16% Similarity=0.147 Sum_probs=120.1
Q ss_pred cEEEEccC---CCChh-hhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhHHHHHH---H-HHHHcCCCceEEE
Q 021229 51 DLVLIHGL---GANAL-WQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQAECVM---R-VMEAHSVKKLSLV 121 (315)
Q Consensus 51 ~vvllHG~---~~~~~-~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~---~-~l~~l~~~~v~lv 121 (315)
.+|++|+. |++.. ..+..+...|.+ +|.|+++|+||+|+|........ ...+++. + +.+....++++++
T Consensus 37 ~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~~~~~~--~~~~D~~a~~~~~~~~~~~~~v~l~ 114 (218)
T d2fuka1 37 TAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFDHGD--GEQDDLRAVAEWVRAQRPTDTLWLA 114 (218)
T ss_dssp EEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCCCTTT--HHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCccCcCc--chHHHHHHHHHHHhhcccCceEEEE
Confidence 45788843 33211 124556677765 59999999999999976433221 1223333 3 3334467899999
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVP 201 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (315)
||||||.+++.+|.+. .++++|+++++... +..
T Consensus 115 G~S~Gg~va~~~a~~~--~~~~lil~ap~~~~--------------------------------------~~~------- 147 (218)
T d2fuka1 115 GFSFGAYVSLRAAAAL--EPQVLISIAPPAGR--------------------------------------WDF------- 147 (218)
T ss_dssp EETHHHHHHHHHHHHH--CCSEEEEESCCBTT--------------------------------------BCC-------
T ss_pred EEcccchhhhhhhccc--ccceEEEeCCcccc--------------------------------------hhh-------
Confidence 9999999999998864 47888887543200 000
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCc
Q 021229 202 SCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHA 281 (315)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~ 281 (315)
...++.+|+|+|+|++|+++|.+.++.+.+.+....++++++|++|+
T Consensus 148 ---------------------------------~~~~~~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~~~~l~~i~ga~H~ 194 (218)
T d2fuka1 148 ---------------------------------SDVQPPAQWLVIQGDADEIVDPQAVYDWLETLEQQPTLVRMPDTSHF 194 (218)
T ss_dssp ---------------------------------TTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCSSCCEEEEETTCCTT
T ss_pred ---------------------------------hccccccceeeEecCCCcCcCHHHHHHHHHHccCCceEEEeCCCCCC
Confidence 00134579999999999999999999998887667899999999997
Q ss_pred cccCChHHHHHHHHHHHhcCCC
Q 021229 282 FNYEKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 282 ~~~e~p~~~~~~i~~fl~~~~~ 303 (315)
+. .+.+++.+.+.+|+++..+
T Consensus 195 f~-~~~~~l~~~~~~~v~~~l~ 215 (218)
T d2fuka1 195 FH-RKLIDLRGALQHGVRRWLP 215 (218)
T ss_dssp CT-TCHHHHHHHHHHHHGGGCS
T ss_pred CC-CCHHHHHHHHHHHHHHhcC
Confidence 65 4556799999999987554
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.89 E-value=6.1e-22 Score=171.99 Aligned_cols=263 Identities=16% Similarity=0.197 Sum_probs=157.2
Q ss_pred eEEEEEecCCC-CCCCcEEEEccCCCCh---hhhHHhhH---hhcc-ccceEEeecCCCCCCCCCCC-------------
Q 021229 36 VMHCWVPKTRN-DSKPDLVLIHGLGANA---LWQWTNII---PHMI-HYFNVYVPDLLFFGDSFTTR------------- 94 (315)
Q Consensus 36 ~~~~~~~~~~~-~~~~~vvllHG~~~~~---~~~w~~~~---~~l~-~~~~vi~~D~~G~G~S~~~~------------- 94 (315)
++.|...+.-+ .+.+.||++|++.+++ .| |..++ ..+. .+|.|||+|..|.|.+++.+
T Consensus 30 ~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~W-W~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~y 108 (376)
T d2vata1 30 PVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSW-WPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPY 108 (376)
T ss_dssp EEEEEEESCCCTTSCCEEEEECCTTCCSCGGGT-CGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBC
T ss_pred eEEEEeecccCCCCCCEEEEcCCCcCCcccccc-HHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcc
Confidence 45566654322 3345688889987654 34 66654 2333 45999999999887654211
Q ss_pred ----CCCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchh
Q 021229 95 ----PERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLE 169 (315)
Q Consensus 95 ----~~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 169 (315)
|..+..+++.....++++||++++. +||.||||+.|+++|..+|++|+++|.+++.....+..+.-.......+.
T Consensus 109 g~~FP~~ti~D~v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~~~~~s~~~~a~~~~~~~ai~ 188 (376)
T d2vata1 109 GAKFPRTTIRDDVRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIY 188 (376)
T ss_dssp GGGCCCCCHHHHHHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHH
T ss_pred cccCCcchhHHHHHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHhchHHHhhhcccccccccchHHHHHHHHHHHHhh
Confidence 1234456677777899999999984 77999999999999999999999999998766443322110000000000
Q ss_pred ---hhh-hhc-cCCCchH-H---HH----------HHHhhhccCCCC-------------------------CCCCcchh
Q 021229 170 ---EAS-KIL-VPQSPGK-L---KE----------LMRYTFFKRPPL-------------------------SLVPSCLL 205 (315)
Q Consensus 170 ---~~~-~~~-~~~~~~~-~---~~----------~~~~~~~~~~~~-------------------------~~~~~~~~ 205 (315)
... ... ....+.. + +. .+...|.+.... ...+...+
T Consensus 189 ~Dp~w~~G~Y~~~~~p~~GL~~Ar~~~~~ty~S~~~~~~rf~~~~~~~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 268 (376)
T d2vata1 189 DDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAV 268 (376)
T ss_dssp HSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGH
T ss_pred ccccccCCCccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhccccccccccccchhhhcccccccccccccccchhHH
Confidence 000 000 0001110 0 00 111112111000 00001123
Q ss_pred HHHHHHHHHHH-----HHHHHHhhhccCcc--------ccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEE
Q 021229 206 SDYIDAMCTEY-----LEEKRELVRAIPKD--------RKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQL 272 (315)
Q Consensus 206 ~~~~~~~~~~~-----~~~~~~~~~~~~~~--------~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~ 272 (315)
..|++...... ......+.+.+... +..+.+.+|++|+|+|.++.|.++|++..+.+++.+ +++++
T Consensus 269 esyL~~~g~k~~~rfDansyl~l~~a~d~~Di~~~~~g~l~~aL~~I~a~~LvI~~~sD~lFPp~~~~e~a~~l-~~a~~ 347 (376)
T d2vata1 269 SSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSI-PNSRL 347 (376)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHS-TTEEE
T ss_pred HHHHHHHHhhhhcccccccHHHHHHHHHhcccccccCCCHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHhc-CCCeE
Confidence 33333221111 01111122222111 123347889999999999999999999999999999 79999
Q ss_pred EEEc-CCCCccccCChHHHHHHHHHHHhc
Q 021229 273 IVIK-KAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 273 ~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
.+|+ ..||..++-+++.+.+.|.+||++
T Consensus 348 ~~I~S~~GHDaFL~e~~~~~~~I~~FL~q 376 (376)
T d2vata1 348 CVVDTNEGHDFFVMEADKVNDAVRGFLDQ 376 (376)
T ss_dssp EECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred EEECCCCCccccccCHHHHHHHHHHHHcC
Confidence 9998 689988887899999999999974
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=6.2e-22 Score=169.41 Aligned_cols=227 Identities=16% Similarity=0.132 Sum_probs=133.6
Q ss_pred ecCCCceEEEEEe-cCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCc--------
Q 021229 30 DLQDGSVMHCWVP-KTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSE-------- 99 (315)
Q Consensus 30 ~~~~g~~~~~~~~-~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~-------- 99 (315)
...||..++.|.. +.+.+..|+||++||++++.. .|..+...|++ +|.|+++|+||||.|.........
T Consensus 62 ~~~dg~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~-~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~ 140 (318)
T d1l7aa_ 62 KSFGNARITGWYAVPDKEGPHPAIVKYHGYNASYD-GEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTK 140 (318)
T ss_dssp EEGGGEEEEEEEEEESSCSCEEEEEEECCTTCCSG-GGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTT
T ss_pred ECCCCcEEEEEEEecCCCCCceEEEEecCCCCCcc-chHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhh
Confidence 3457888877653 334455688999999988876 47777777764 599999999999999643221100
Q ss_pred ----------hhH---HHHHHHHHHHcC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhh
Q 021229 100 ----------SFQ---AECVMRVMEAHS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMF 163 (315)
Q Consensus 100 ----------~~~---a~~~~~~l~~l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~ 163 (315)
... .....+.+..+. ..++.++|+|+||..++..+...+. +.+++...+..... . .
T Consensus 141 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~-~----~-- 212 (318)
T d1l7aa_ 141 GILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF-E----R-- 212 (318)
T ss_dssp TTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH-H----H--
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccH-H----H--
Confidence 000 111223344443 2468999999999999999988874 55555433222110 0 0
Q ss_pred cccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCe
Q 021229 164 KVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPT 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 243 (315)
................... . . ... ..... +...........+++|++|+
T Consensus 213 -------~~~~~~~~~~~~~~~~~~~----~-~-----~~~--~~~~~------------~~~~~~~~~~~~~~~i~~P~ 261 (318)
T d1l7aa_ 213 -------AIDVALEQPYLEINSFFRR----N-G-----SPE--TEVQA------------MKTLSYFDIMNLADRVKVPV 261 (318)
T ss_dssp -------HHHHCCSTTTTHHHHHHHH----S-C-----CHH--HHHHH------------HHHHHTTCHHHHGGGCCSCE
T ss_pred -------Hhhcccccccchhhhhhhc----c-c-----ccc--ccccc------------cccccccccccccccCCCCE
Confidence 0000000000000000000 0 0 000 00000 00000111223456889999
Q ss_pred EEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 244 LILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 244 lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
|+|+|++|.++|++.++.+.+.++.+.++++++++||.... ++.+.+.+||++
T Consensus 262 Lii~G~~D~~vp~~~~~~~~~~l~~~~~l~~~~~~gH~~~~----~~~~~~~~fl~~ 314 (318)
T d1l7aa_ 262 LMSIGLIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEYIP----AFQTEKLAFFKQ 314 (318)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCSSCCH----HHHHHHHHHHHH
T ss_pred EEEEECCCCCcCHHHHHHHHHHcCCCcEEEEECCCCCCCcH----HHHHHHHHHHHH
Confidence 99999999999999999999988667899999999997654 455555556553
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=1.1e-20 Score=155.26 Aligned_cols=214 Identities=20% Similarity=0.158 Sum_probs=129.4
Q ss_pred eeeeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCCchhH
Q 021229 24 FRSSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERSESFQ 102 (315)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~ 102 (315)
++.+.+++. |..+.++.+ ++++|.||++||++++.. .|..+.+.|++ +|.|+++|+||||.|............
T Consensus 3 ~~~~~~~l~-g~~~~~~~p---~~~~~~vl~lHG~~~~~~-~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~~~~ 77 (238)
T d1ufoa_ 3 VRTERLTLA-GLSVLARIP---EAPKALLLALHGLQGSKE-HILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRY 77 (238)
T ss_dssp EEEEEEEET-TEEEEEEEE---SSCCEEEEEECCTTCCHH-HHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTH
T ss_pred EEEEEEEEC-CEEEEecCC---CCCCeEEEEeCCCCCCHH-HHHHHHHHHHHCCCEEEEecCCCCCCCcccccccccchh
Confidence 345567774 655556554 345679999999999886 58888888875 599999999999999754433221110
Q ss_pred -----------HHHHHHHH---HHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccch
Q 021229 103 -----------AECVMRVM---EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDL 168 (315)
Q Consensus 103 -----------a~~~~~~l---~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 168 (315)
.+.+..++ ...+.+++.++|+||||.+++.++.++|+ +..++.+......... ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~--~~~------- 147 (238)
T d1ufoa_ 78 VEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKL--PQG------- 147 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCC--CTT-------
T ss_pred hhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeecccccc--ccc-------
Confidence 11122222 22345789999999999999999999986 4444433222111100 000
Q ss_pred hhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEe
Q 021229 169 EEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWG 248 (315)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 248 (315)
.. .. ........ . . ..........++|+|+++|
T Consensus 148 ------------------------~~------~~--~~~~~~~~---------~---~---~~~~~~~~~~~~P~li~~G 180 (238)
T d1ufoa_ 148 ------------------------QV------VE--DPGVLALY---------Q---A---PPATRGEAYGGVPLLHLHG 180 (238)
T ss_dssp ------------------------CC------CC--CHHHHHHH---------H---S---CGGGCGGGGTTCCEEEEEE
T ss_pred ------------------------cc------cc--cccccchh---------h---h---hhhhhhhhhcCCCeEEEEc
Confidence 00 00 00000000 0 0 0000111234689999999
Q ss_pred CCCCCCchHHHHHHHhhcC-----CCcEEEEEcCCCCccccCChHHHHHHHHHHHh
Q 021229 249 EHDQIFPLELGRRLKSHLG-----DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLL 299 (315)
Q Consensus 249 ~~D~~~~~~~~~~l~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 299 (315)
++|.++|.+.++.+.+.+. .+.++..++|+||.+.-+.-+...+.+.+||+
T Consensus 181 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~ 236 (238)
T d1ufoa_ 181 SRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLE 236 (238)
T ss_dssp TTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhc
Confidence 9999999999888876552 24578889999998764333344444444443
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.87 E-value=8e-21 Score=163.79 Aligned_cols=265 Identities=15% Similarity=0.193 Sum_probs=158.9
Q ss_pred ceEEEEEecCCCC-CCCcEEEEccCCCChh---------hhHHhhHh---hcc-ccceEEeecCCCCCCCCCCC------
Q 021229 35 SVMHCWVPKTRND-SKPDLVLIHGLGANAL---------WQWTNIIP---HMI-HYFNVYVPDLLFFGDSFTTR------ 94 (315)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~vvllHG~~~~~~---------~~w~~~~~---~l~-~~~~vi~~D~~G~G~S~~~~------ 94 (315)
.++.|....+-+. +...||+.|++.+++. | |..++- .+. .+|.||++|+.|.|.+++++
T Consensus 24 ~~laY~t~G~ln~~~~NaVlv~h~~tg~~~~~~~~~~~gW-W~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~ 102 (357)
T d2b61a1 24 INVAYQTYGTLNDEKNNAVLICHALTGDAEPYFDDGRDGW-WQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQ 102 (357)
T ss_dssp EEEEEEEESCCCTTCCCEEEEECCTTCCSCSCCSSSCCCT-TGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTT
T ss_pred ceEEEEeecccCCCCCCEEEEcCCCCccccccccCCCCCc-HHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCC
Confidence 4677776643233 3357888899877642 4 666652 333 45999999999987654221
Q ss_pred ---------CCCCchhHHHHHHHHHHHcCCCce-EEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhc
Q 021229 95 ---------PERSESFQAECVMRVMEAHSVKKL-SLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFK 164 (315)
Q Consensus 95 ---------~~~~~~~~a~~~~~~l~~l~~~~v-~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (315)
|..+..+++.....++++||++++ .+||.||||+.|+++|.+||+.|+++|.++++.......+.-....
T Consensus 103 tg~~~g~~FP~iti~D~v~aq~~Ll~~LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~~~ 182 (357)
T d2b61a1 103 TGKPYGSQFPNIVVQDIVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVM 182 (357)
T ss_dssp TSSBCGGGCCCCCHHHHHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHH
T ss_pred CCCCCCcccccchhHHHHHHHHHHHHHhCcceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHHHH
Confidence 123455567777889999999999 5669999999999999999999999999987654433221100000
Q ss_pred ccch---hhhh-hhcc-CCCch---HHHHH-----------HHhhhccCCCC---CCCCcchhHHHHHHHHHHH-----H
Q 021229 165 VSDL---EEAS-KILV-PQSPG---KLKEL-----------MRYTFFKRPPL---SLVPSCLLSDYIDAMCTEY-----L 217 (315)
Q Consensus 165 ~~~~---~~~~-~~~~-~~~~~---~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~ 217 (315)
...+ .... .... ...+. ...+. +...|.+.... .+........|++...... .
T Consensus 183 ~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rfDa 262 (357)
T d2b61a1 183 RQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDA 262 (357)
T ss_dssp HHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhCCH
Confidence 0000 0000 0000 01111 11111 11122221110 0112222344444322211 1
Q ss_pred HHHHHhhhccCc-------cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEEcCC-CCccccCC
Q 021229 218 EEKRELVRAIPK-------DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVIKKA-GHAFNYEK 286 (315)
Q Consensus 218 ~~~~~~~~~~~~-------~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i~~~-gH~~~~e~ 286 (315)
.....+.+.+.. .+..+.+.+|++|+|+|..+.|.++|++..+.+++.++ .++++++|+.- ||..++-+
T Consensus 263 n~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL~e 342 (357)
T d2b61a1 263 NSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVD 342 (357)
T ss_dssp HHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHC
T ss_pred HHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCcC
Confidence 111112222211 11234578999999999999999999998888887773 34688888764 99988888
Q ss_pred hHHHHHHHHHHHhc
Q 021229 287 PKEFYKHLKSFLLD 300 (315)
Q Consensus 287 p~~~~~~i~~fl~~ 300 (315)
++++.+.|.+||+.
T Consensus 343 ~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 343 YDQFEKRIRDGLAG 356 (357)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcc
Confidence 99999999999974
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=5.3e-22 Score=144.53 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=82.6
Q ss_pred eeeeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHH
Q 021229 26 SSVTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAEC 105 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~ 105 (315)
..++.+ +|..++|... +++||||||||.+. .| .+.|+++|+|+++|+||||.|+. +..+...++++
T Consensus 3 ~~~~~~-~G~~l~y~~~----G~G~pvlllHG~~~----~w---~~~L~~~yrvi~~DlpG~G~S~~--p~~s~~~~a~~ 68 (122)
T d2dsta1 3 AGYLHL-YGLNLVFDRV----GKGPPVLLVAEEAS----RW---PEALPEGYAFYLLDLPGYGRTEG--PRMAPEELAHF 68 (122)
T ss_dssp EEEEEE-TTEEEEEEEE----CCSSEEEEESSSGG----GC---CSCCCTTSEEEEECCTTSTTCCC--CCCCHHHHHHH
T ss_pred ceEEEE-CCEEEEEEEE----cCCCcEEEEecccc----cc---cccccCCeEEEEEeccccCCCCC--cccccchhHHH
Confidence 345777 6889999986 35789999999421 25 45678899999999999999964 45677778999
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+.++++++++++++|+||||||.|++++++..+
T Consensus 69 i~~ll~~L~i~~~~viG~S~Gg~ia~~laa~~~ 101 (122)
T d2dsta1 69 VAGFAVMMNLGAPWVLLRGLGLALGPHLEALGL 101 (122)
T ss_dssp HHHHHHHTTCCSCEEEECGGGGGGHHHHHHTTC
T ss_pred HHHHHHHhCCCCcEEEEeCccHHHHHHHHhhcc
Confidence 999999999999999999999999999998654
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.86 E-value=9.4e-21 Score=163.64 Aligned_cols=259 Identities=17% Similarity=0.216 Sum_probs=151.6
Q ss_pred ceEEEEEecCCCC-CCCcEEEEccCCCCh-------------hhhHHhhHh---hcc-ccceEEeecCCCCCCCCCCC--
Q 021229 35 SVMHCWVPKTRND-SKPDLVLIHGLGANA-------------LWQWTNIIP---HMI-HYFNVYVPDLLFFGDSFTTR-- 94 (315)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~vvllHG~~~~~-------------~~~w~~~~~---~l~-~~~~vi~~D~~G~G~S~~~~-- 94 (315)
.++.|....+-+. +.+.||+.|++.+++ .| |+.++- .+. ++|.||++|+.|.|.|++++
T Consensus 27 ~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gw-w~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s 105 (362)
T d2pl5a1 27 VVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGW-WDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLS 105 (362)
T ss_dssp EEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCT-TTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTS
T ss_pred ceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcch-HHHhcCCCCccCccccEEEeeccccCcccccCccc
Confidence 3566766543222 335788889987763 24 666552 232 45999999999988775421
Q ss_pred -------------CCCCchhHHHHHHHHHHHcCCCceE-EEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhh
Q 021229 95 -------------PERSESFQAECVMRVMEAHSVKKLS-LVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRD 160 (315)
Q Consensus 95 -------------~~~~~~~~a~~~~~~l~~l~~~~v~-lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 160 (315)
|..+..+.+.....++++||+++++ ++|.||||+.|+++|..||+.|+++|.+++..........-
T Consensus 106 ~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~~~~ 185 (362)
T d2pl5a1 106 IHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 185 (362)
T ss_dssp BCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred cccccccccCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHHHHH
Confidence 1123444566667889999999987 67999999999999999999999999998766443322110
Q ss_pred hhhcccchh---hhh-hhccCCCchH---HHH-----------HHHhhhccCCCCC-------CCCcc------------
Q 021229 161 RMFKVSDLE---EAS-KILVPQSPGK---LKE-----------LMRYTFFKRPPLS-------LVPSC------------ 203 (315)
Q Consensus 161 ~~~~~~~~~---~~~-~~~~~~~~~~---~~~-----------~~~~~~~~~~~~~-------~~~~~------------ 203 (315)
.......+. ... .......+.. ..+ .+...|.+..... .+..+
T Consensus 186 ~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~~rf 265 (362)
T d2pl5a1 186 NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRF 265 (362)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCC
T ss_pred HHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence 000000000 000 0000111111 001 1111221111000 00000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCc-cccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCcEEEEE-cCC
Q 021229 204 LLSDYIDAMCTEYLEEKRELVRAIPK-DRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNAQLIVI-KKA 278 (315)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~~~~~i-~~~ 278 (315)
-...|+. ........ .... .+..+.+.+|++|+|+|.++.|.++|++..+.+++.++ .++++++| ...
T Consensus 266 Dan~yl~------l~~a~~~~-Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~ 338 (362)
T d2pl5a1 266 DANSYIY------VTKALDHY-SLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGE 338 (362)
T ss_dssp CHHHHHH------HHHHHHHC-BCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCB
T ss_pred CHHHHHH------HHhhhhcc-cccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 0011110 00000000 1111 11234578999999999999999999999999998873 23466666 468
Q ss_pred CCccccCChHHHHHHHHHHHhcC
Q 021229 279 GHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 279 gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
||..++.+++++.+.|.+||++.
T Consensus 339 GHdaFL~e~~~~~~~I~~FL~~p 361 (362)
T d2pl5a1 339 GHDSFLLKNPKQIEILKGFLENP 361 (362)
T ss_dssp SSGGGGSCCHHHHHHHHHHHHCC
T ss_pred CcchhccCHHHHHHHHHHHHcCC
Confidence 99999999999999999999853
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.84 E-value=2.7e-20 Score=155.27 Aligned_cols=228 Identities=21% Similarity=0.267 Sum_probs=140.7
Q ss_pred eeeeecCCCceEEEEEecCCC--CCCCcEEEEccCCCCh-hhhHHhhHhhccc-cceEEeecCCCCCCCCCC-----CCC
Q 021229 26 SSVTDLQDGSVMHCWVPKTRN--DSKPDLVLIHGLGANA-LWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTT-----RPE 96 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~~~--~~~~~vvllHG~~~~~-~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~-----~~~ 96 (315)
..+++..||..+..|...+.+ ++.|.||++||.+... ...|......+++ +|.|+++|+||+|.+... ...
T Consensus 14 ~v~~~s~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g~~~~~~~~~~ 93 (260)
T d2hu7a2 14 LVWVESFDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGD 93 (260)
T ss_dssp EEEEECTTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSCHHHHHTTTTC
T ss_pred EEEEECCCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccccccccccccc
Confidence 345666799988887654333 3446899999843221 1245555665554 599999999998766421 111
Q ss_pred CCchh--HHHHHHHHHHHc-CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhh
Q 021229 97 RSESF--QAECVMRVMEAH-SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASK 173 (315)
Q Consensus 97 ~~~~~--~a~~~~~~l~~l-~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (315)
..... ....+.+++... ..+++.++|+|+||.+++.++..+|+.+++++..++...... ...
T Consensus 94 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~------~~~--------- 158 (260)
T d2hu7a2 94 PCGGELEDVSAAARWARESGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE------MYE--------- 158 (260)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHH------HHH---------
T ss_pred cchhhhhhhcccccccccccccceeeccccccccccccchhccCCcccccccccccchhhhh------hhc---------
Confidence 11111 122233344443 357899999999999999999999999988877654332110 000
Q ss_pred hccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCC
Q 021229 174 ILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQI 253 (315)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~ 253 (315)
................. .+. +. .......+.++++|+|+++|++|.+
T Consensus 159 ----~~~~~~~~~~~~~~~~~-----------~~~---------------~~---~~~~~~~~~~~~~P~liihG~~D~~ 205 (260)
T d2hu7a2 159 ----LSDAAFRNFIEQLTGGS-----------REI---------------MR---SRSPINHVDRIKEPLALIHPQNDSR 205 (260)
T ss_dssp ----TCCHHHHHHHHHHHCSC-----------HHH---------------HH---HTCGGGCGGGCCSCEEEEEETTCSS
T ss_pred ----ccccccccccccccccc-----------ccc---------------cc---ccchhhcccccCCCceeeecccCce
Confidence 00000111111000000 000 00 0112345678899999999999999
Q ss_pred CchHHHHHHHhhc---CCCcEEEEEcCCCCccc-cCChHHHHHHHHHHHhcC
Q 021229 254 FPLELGRRLKSHL---GDNAQLIVIKKAGHAFN-YEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 254 ~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~ 301 (315)
+|.+.++.+.+.+ +..+++++++++||.+. .|+..++.+.+.+||++.
T Consensus 206 vp~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~e~~~~~~~~~~~fl~~h 257 (260)
T d2hu7a2 206 TPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQ 257 (260)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHCCCCeEEEEECcCCCCCCChHhHHHHHHHHHHHHHHH
Confidence 9999988887654 34579999999999764 366678888889999753
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.82 E-value=4.1e-23 Score=176.64 Aligned_cols=241 Identities=12% Similarity=0.063 Sum_probs=126.6
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhh-------Hh-hccccceEEeecCCCCCCCCCCCCCCCchhHHHHH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNI-------IP-HMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECV 106 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~-------~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~ 106 (315)
..++|+.+ .+++++|||||||++.++. .|..+ ++ .++++|+|+++|+||||.|.......+....++++
T Consensus 46 ~~v~~~~p--~~~~~~PvvllHG~~~~~~-~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~~~~~ 122 (318)
T d1qlwa_ 46 MYVRYQIP--QRAKRYPITLIHGCCLTGM-TWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAP 122 (318)
T ss_dssp EEEEEEEE--TTCCSSCEEEECCTTCCGG-GGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSC
T ss_pred EEEEEECC--CCCCCCcEEEECCCCCCcC-ccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHHHHHH
Confidence 34566654 3455778999999998875 68653 33 44567999999999999996433222222223333
Q ss_pred HHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhh-hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 107 MRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEK-IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 107 ~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
.+.++.+. ..++.++||||||.++..++...+.. ...+++.+........ ... .. .. ....
T Consensus 123 ~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~--~~--------~~~~ 186 (318)
T d1qlwa_ 123 ASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGS-----MPT-PN--PT--------VANL 186 (318)
T ss_dssp GGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGG-----SCS-SC--HH--------HHHH
T ss_pred HHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccc-----hhh-hh--hh--------HHHH
Confidence 34444332 34677899999999988887655332 2222222111111000 000 00 00 0000
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcc------CccccccccccCCCCeEEEEeCCCCCCchH
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAI------PKDRKISNIDKITQPTLILWGEHDQIFPLE 257 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 257 (315)
............. .........+.. ........... ...........+++|+|+++|++|+.+|..
T Consensus 187 ~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Lii~G~~D~~~p~~ 258 (318)
T d1qlwa_ 187 SKLAIKLDGTVLL--SHSQSGIYPFQT------AAMNPKGITAIVSVEPGECPKPEDVKPLTSIPVLVVFGDHIEEFPRW 258 (318)
T ss_dssp HHHHHHHTSEEEE--EEGGGTTHHHHH------HHHCCTTEEEEEEESCSCCCCGGGCGGGTTSCEEEEECSSCTTCTTT
T ss_pred HHHHhhhccccch--hhhcccchhhhh------hhhhhhHHHHHHhhhcccccchhhhhhhccCCEEEEecCcCcccChh
Confidence 0000000000000 000000000000 00000111110 011123445678999999999999999854
Q ss_pred H-----HHHHHh---hcCCCcEEEEEc-----CCCCccccCCh-HHHHHHHHHHHhcCC
Q 021229 258 L-----GRRLKS---HLGDNAQLIVIK-----KAGHAFNYEKP-KEFYKHLKSFLLDSQ 302 (315)
Q Consensus 258 ~-----~~~l~~---~~~~~~~~~~i~-----~~gH~~~~e~p-~~~~~~i~~fl~~~~ 302 (315)
. .+.+.+ ..+.+++++.+| |+||+++.|.+ +++++.|.+||++..
T Consensus 259 ~~~~~~~~~~~~~l~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~~ 317 (318)
T d1qlwa_ 259 APRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNT 317 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhcc
Confidence 3 222222 223578888865 67899999886 899999999999764
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.82 E-value=7.8e-20 Score=156.87 Aligned_cols=225 Identities=13% Similarity=0.088 Sum_probs=127.7
Q ss_pred cCCCceEEEEEecCC--CCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCC----------
Q 021229 31 LQDGSVMHCWVPKTR--NDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERS---------- 98 (315)
Q Consensus 31 ~~~g~~~~~~~~~~~--~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~---------- 98 (315)
..||.+++.|...+. +++.|.||++||++.+.. .|.......+.+|.|+++|+||||.|........
T Consensus 62 s~dG~~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~-~~~~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~ 140 (322)
T d1vlqa_ 62 GYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNGGRG-FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQY 140 (322)
T ss_dssp CGGGCEEEEEEEEECCSCSSEEEEEECCCTTCCCC-CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCC
T ss_pred CCCCcEEEEEEEeccCCCCCccEEEEecCCCCCcC-cHHHHHHHHhCCCEEEEeeccccCCCCCCccccccccccccccc
Confidence 357888887764332 344568899999887664 3555555556679999999999999853211000
Q ss_pred ---------------chhHHHHHHHHHHH---cC---CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchh
Q 021229 99 ---------------ESFQAECVMRVMEA---HS---VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQD 157 (315)
Q Consensus 99 ---------------~~~~a~~~~~~l~~---l~---~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~ 157 (315)
......+....++. .. .+++.++|+|+||.+++..+...| ++++++...+.......
T Consensus 141 ~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~~~~- 218 (322)
T d1vlqa_ 141 PGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCHFRR- 218 (322)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCCHHH-
T ss_pred cchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCccccHHH-
Confidence 00011222233322 22 357999999999999998887765 57777654332211100
Q ss_pred hhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccc
Q 021229 158 LRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNID 237 (315)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (315)
... ............... ... . ......+. .. ..+....+.
T Consensus 219 ----~~~---------~~~~~~~~~~~~~~~---~~~-~-------~~~~~~~~------------~~---~~d~~~~a~ 259 (322)
T d1vlqa_ 219 ----AVQ---------LVDTHPYAEITNFLK---THR-D-------KEEIVFRT------------LS---YFDGVNFAA 259 (322)
T ss_dssp ----HHH---------HCCCTTHHHHHHHHH---HCT-T-------CHHHHHHH------------HH---TTCHHHHHT
T ss_pred ----HHh---------hccccchhhHHhhhh---cCc-c-------hhhhHHHH------------hh---hhhHHHHHh
Confidence 000 000000000000000 000 0 00000000 00 011222356
Q ss_pred cCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 238 KITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 238 ~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++++|+|+++|++|.++|++.+..+.+.++..++++++|++||....+ .-.+...+||++
T Consensus 260 ~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~~~~l~~~p~~~H~~~~~---~~~~~~~~~l~~ 319 (322)
T d1vlqa_ 260 RAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYPYNNHEGGGS---FQAVEQVKFLKK 319 (322)
T ss_dssp TCCSCEEEEEETTCSSSCHHHHHHHHHHCCSSEEEEEETTCCTTTTHH---HHHHHHHHHHHH
T ss_pred cCCCCEEEEEeCCCCCcCHHHHHHHHHHCCCCeEEEEECCCCCCCccc---cCHHHHHHHHHH
Confidence 789999999999999999999999988886678999999999954221 112333466654
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.81 E-value=5.3e-19 Score=146.89 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=131.3
Q ss_pred CCCCCcEEEEccC--CCChhhhHHhhHhhccccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHH-HHcCCCceEEEE
Q 021229 46 NDSKPDLVLIHGL--GANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVM-EAHSVKKLSLVG 122 (315)
Q Consensus 46 ~~~~~~vvllHG~--~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l-~~l~~~~v~lvG 122 (315)
++++++|+|+||+ +++. +.|..+...|...+.|+++|+||||.+.. ...+...+++.+.+.+ +..+..+++|+|
T Consensus 39 g~~~~~l~c~~~~~~gg~~-~~y~~La~~L~~~~~V~al~~pG~~~~e~--~~~s~~~~a~~~~~~i~~~~~~~P~~L~G 115 (255)
T d1mo2a_ 39 GPGEVTVICCAGTAAISGP-HEFTRLAGALRGIAPVRAVPQPGYEEGEP--LPSSMAAVAAVQADAVIRTQGDKPFVVAG 115 (255)
T ss_dssp CSCSSEEEEECCCSSSCSG-GGGHHHHHHHTTTCCEEEECCTTSSTTCC--EESSHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CCCCCeEEEECCCCCCCCH-HHHHHHHHhcCCCceEEEEeCCCcCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3457889999984 3444 46889999999899999999999998743 2345556677766555 445678899999
Q ss_pred EchhHHHHHHHHHhhhhh---hceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCC
Q 021229 123 LSYGGFVGYSMAAQFKEK---IEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSL 199 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~~---v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
|||||.+|+++|.+.+++ |..++++++..+......... .............. .
T Consensus 116 hS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~---------------------~~~~~~~~~~~~~~--~ 172 (255)
T d1mo2a_ 116 HSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAW---------------------LEELTATLFDRETV--R 172 (255)
T ss_dssp CSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHH---------------------HHHHHTTCC----C--C
T ss_pred eCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhH---------------------HHHHHHHhhccccc--c
Confidence 999999999999988664 888999987543321110000 00000000000000 0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcCCCcEEEEEcCCC
Q 021229 200 VPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLGDNAQLIVIKKAG 279 (315)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~~~~~~~~i~~~g 279 (315)
.. ...+..+... ..+...+ ....+++|++++.+++|...... ..+........+++.+++ +
T Consensus 173 ~~----~~~l~a~~~~-----~~~~~~~-------~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~~~~~~~~~~v~G-~ 233 (255)
T d1mo2a_ 173 MD----DTRLTALGAY-----DRLTGQW-------RPRETGLPTLLVSAGEPMGPWPD--DSWKPTWPFEHDTVAVPG-D 233 (255)
T ss_dssp CC----HHHHHHHHHH-----HHHHHHC-------CCCCCCCCEEEEECCSSSSCCTT--CCCCCCCCSSCEEEECCS-C
T ss_pred CC----HHHHHHHHHH-----HHHHhcC-------CCccccceEEEeecCCCCCcchh--hHHHHhCCCCcEEEEECC-C
Confidence 11 1111111110 1111111 12468899999999988554332 234444444678999985 8
Q ss_pred Ccccc-CChHHHHHHHHHHHh
Q 021229 280 HAFNY-EKPKEFYKHLKSFLL 299 (315)
Q Consensus 280 H~~~~-e~p~~~~~~i~~fl~ 299 (315)
|+.++ ++++.+++.|.+||.
T Consensus 234 H~~ml~~~~~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 234 HFTMVQEHADAIARHIDAWLG 254 (255)
T ss_dssp CSSCSSCCHHHHHHHHHHHHT
T ss_pred CcccccccHHHHHHHHHHHhC
Confidence 98544 688999999999985
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=4e-18 Score=139.24 Aligned_cols=179 Identities=19% Similarity=0.271 Sum_probs=116.5
Q ss_pred CCCCcEEEEccCCCChhhhHHhhHhhcc-ccceEEeecCCCCC---------CCCC----CCCCC--Cc---hhHHHHHH
Q 021229 47 DSKPDLVLIHGLGANALWQWTNIIPHMI-HYFNVYVPDLLFFG---------DSFT----TRPER--SE---SFQAECVM 107 (315)
Q Consensus 47 ~~~~~vvllHG~~~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G---------~S~~----~~~~~--~~---~~~a~~~~ 107 (315)
+..++|||+||+|.+.. .|..+...+. .++.++++|-|.+. .+.. ..... .. ....+.+.
T Consensus 19 ~~~~~VI~lHG~G~~~~-~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~l~ 97 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH-GWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIK 97 (229)
T ss_dssp CCSEEEEEECCSSSCHH-HHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH-HHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHHHH
Confidence 34568999999999886 5887777664 45889998765321 1100 00111 11 11233344
Q ss_pred HHHHH-----cCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchH
Q 021229 108 RVMEA-----HSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGK 182 (315)
Q Consensus 108 ~~l~~-----l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (315)
.+++. ...+++.|+|+|+||.+|+.++.++|+++.+++.+++.......
T Consensus 98 ~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~-------------------------- 151 (229)
T d1fj2a_ 98 ALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS-------------------------- 151 (229)
T ss_dssp HHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG--------------------------
T ss_pred HHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc--------------------------
Confidence 44433 23568999999999999999999999999999887553211000
Q ss_pred HHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHH
Q 021229 183 LKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRL 262 (315)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l 262 (315)
+... . ......++|++++||++|+++|.+.++..
T Consensus 152 --------~~~~-~-------------------------------------~~~~~~~~Pvli~hG~~D~~vp~~~~~~~ 185 (229)
T d1fj2a_ 152 --------FPQG-P-------------------------------------IGGANRDISILQCHGDCDPLVPLMFGSLT 185 (229)
T ss_dssp --------SCSS-C-------------------------------------CCSTTTTCCEEEEEETTCSSSCHHHHHHH
T ss_pred --------cccc-c-------------------------------------cccccccCceeEEEcCCCCeeCHHHHHHH
Confidence 0000 0 00112357999999999999999888766
Q ss_pred Hhhc-----CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCC
Q 021229 263 KSHL-----GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQ 302 (315)
Q Consensus 263 ~~~~-----~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 302 (315)
.+.+ +.+.++++++++||.+. +++ .+.+.+||++..
T Consensus 186 ~~~L~~~~~~~~v~~~~~~g~gH~i~---~~~-~~~~~~wL~~~L 226 (229)
T d1fj2a_ 186 VEKLKTLVNPANVTFKTYEGMMHSSC---QQE-MMDVKQFIDKLL 226 (229)
T ss_dssp HHHHHHHSCGGGEEEEEETTCCSSCC---HHH-HHHHHHHHHHHS
T ss_pred HHHHHhcCCCCceEEEEeCCCCCccC---HHH-HHHHHHHHHhHC
Confidence 5543 13468889999999764 334 567889998765
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.78 E-value=2.6e-18 Score=137.51 Aligned_cols=175 Identities=18% Similarity=0.205 Sum_probs=119.6
Q ss_pred CCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCC--C--CC--CCchh---HHHH----HHHHH
Q 021229 44 TRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTT--R--PE--RSESF---QAEC----VMRVM 110 (315)
Q Consensus 44 ~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~--~--~~--~~~~~---~a~~----~~~~l 110 (315)
..++.+|.||++||+|++.. .|..+.+.+.+++.|++++.+..+..... . .. ..... ..+. +..+.
T Consensus 9 ~~~~~~P~vi~lHG~g~~~~-~~~~~~~~l~~~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (202)
T d2h1ia1 9 GKDTSKPVLLLLHGTGGNEL-DLLPLAEIVDSEASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTKELNEFLDEAA 87 (202)
T ss_dssp CSCTTSCEEEEECCTTCCTT-TTHHHHHHHHTTSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCHH-HHHHHHHHhccCCceeeecccccCCCCccccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 34566789999999998875 58888888988999999986533322110 0 00 11111 1222 33334
Q ss_pred HHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHH
Q 021229 111 EAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMR 188 (315)
Q Consensus 111 ~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (315)
+..+ .+++.++|+|+||.+++.++.++|+.+.+++++++......
T Consensus 88 ~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~--------------------------------- 134 (202)
T d2h1ia1 88 KEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------------------- 134 (202)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------------------
T ss_pred HhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccc---------------------------------
Confidence 4444 45899999999999999999999999998887643221000
Q ss_pred hhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC-
Q 021229 189 YTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG- 267 (315)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~- 267 (315)
.........|+++++|++|.++|++.++.+++.+.
T Consensus 135 --------------------------------------------~~~~~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~ 170 (202)
T d2h1ia1 135 --------------------------------------------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLEN 170 (202)
T ss_dssp --------------------------------------------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHT
T ss_pred --------------------------------------------ccccccccchhhcccccCCCccCHHHHHHHHHHHHH
Confidence 00012245689999999999999999888887663
Q ss_pred --CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 268 --DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 268 --~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
.+.+++.+++ ||.+. .+..+.+.+||++.
T Consensus 171 ~g~~~~~~~~~g-gH~~~----~~~~~~~~~wl~k~ 201 (202)
T d2h1ia1 171 ANANVTMHWENR-GHQLT----MGEVEKAKEWYDKA 201 (202)
T ss_dssp TTCEEEEEEESS-TTSCC----HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECC-CCcCC----HHHHHHHHHHHHHh
Confidence 2468888875 89763 34467889999864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.76 E-value=5.2e-18 Score=136.60 Aligned_cols=180 Identities=14% Similarity=0.182 Sum_probs=117.7
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCC--CC-CCC-CC--CCCCCch---hHHHH--
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLF--FG-DSF-TT--RPERSES---FQAEC-- 105 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G--~G-~S~-~~--~~~~~~~---~~a~~-- 105 (315)
+.|....++.++.|.||++||+|.+.. .|..+.+.+.+++.+++++.+. .| .+. .. ....... ...+.
T Consensus 11 ~~~~~~~~~~~~~p~vv~lHG~g~~~~-~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (209)
T d3b5ea1 11 FPYRLLGAGKESRECLFLLHGSGVDET-TLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFA 89 (209)
T ss_dssp SCEEEESTTSSCCCEEEEECCTTBCTT-TTHHHHHHHCTTSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHH
T ss_pred ceeEecCCCCCCCCEEEEEcCCCCCHH-HHHHHHHHhccCcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHH
Confidence 445555556667899999999999875 5888999998889999987641 11 110 00 0001111 11223
Q ss_pred --HHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCch
Q 021229 106 --VMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPG 181 (315)
Q Consensus 106 --~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (315)
+..+.++.+ .++++|+||||||.+++.++.++|+.+.+++++++......
T Consensus 90 ~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~-------------------------- 143 (209)
T d3b5ea1 90 AFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH-------------------------- 143 (209)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS--------------------------
T ss_pred HHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccc--------------------------
Confidence 334444444 46899999999999999999999999999988754321100
Q ss_pred HHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHH
Q 021229 182 KLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRR 261 (315)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 261 (315)
. + .....++|+++++|++|++++. .++.
T Consensus 144 --------------~----~---------------------------------~~~~~~~p~~~~~G~~D~~~~~-~~~~ 171 (209)
T d3b5ea1 144 --------------V----P---------------------------------ATDLAGIRTLIIAGAADETYGP-FVPA 171 (209)
T ss_dssp --------------C----C---------------------------------CCCCTTCEEEEEEETTCTTTGG-GHHH
T ss_pred --------------c----c---------------------------------ccccccchheeeeccCCCccCH-HHHH
Confidence 0 0 0122457999999999999984 3344
Q ss_pred HHhhc---CCCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 262 LKSHL---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 262 l~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.+.+ +-+.+++++++ ||.+. +++ .+.+.+||+.
T Consensus 172 ~~~~l~~~G~~v~~~~~~g-gH~i~---~~~-~~~~~~wl~~ 208 (209)
T d3b5ea1 172 LVTLLSRHGAEVDARIIPS-GHDIG---DPD-AAIVRQWLAG 208 (209)
T ss_dssp HHHHHHHTTCEEEEEEESC-CSCCC---HHH-HHHHHHHHHC
T ss_pred HHHHHHHCCCCeEEEEECC-CCCCC---HHH-HHHHHHHhCC
Confidence 44433 23468899986 89774 444 4667899863
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.75 E-value=2.4e-16 Score=127.52 Aligned_cols=196 Identities=17% Similarity=0.168 Sum_probs=129.9
Q ss_pred CCCceEEEEEecCCCCCCCcEEEEccC---CCChhh-hHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCC-CchhHHHH
Q 021229 32 QDGSVMHCWVPKTRNDSKPDLVLIHGL---GANALW-QWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPER-SESFQAEC 105 (315)
Q Consensus 32 ~~g~~~~~~~~~~~~~~~~~vvllHG~---~~~~~~-~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~-~~~~~a~~ 105 (315)
++| +++.|..++..+..+.+|++||. |++... ....+...+. .+|.++.+|+||.|.|....... .+...+..
T Consensus 8 ~~G-~Le~~~~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~~~~~~~e~~d~~a 86 (218)
T d2i3da1 8 PAG-RLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAAS 86 (218)
T ss_dssp TTE-EEEEEEECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCCCSSHHHHHHHHH
T ss_pred CCc-cEEEEEeCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccccccchhHHHHHHH
Confidence 456 67877665544556789999984 343211 1233444444 35999999999999996543221 12222333
Q ss_pred HHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 106 VMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 106 ~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
+.+++.... ..+++++|+|+||.++..++.+.+. +.+++++.+.....
T Consensus 87 a~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~~~~~~----------------------------- 136 (218)
T d2i3da1 87 ALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY----------------------------- 136 (218)
T ss_dssp HHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS-----------------------------
T ss_pred HHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-ccceeecccccccc-----------------------------
Confidence 344444443 4679999999999999999887753 45555543221000
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHH
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~ 263 (315)
....+....+|+|+++|+.|.+++......+.
T Consensus 137 ------------------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~ 168 (218)
T d2i3da1 137 ------------------------------------------------DFSFLAPCPSSGLIINGDADKVAPEKDVNGLV 168 (218)
T ss_dssp ------------------------------------------------CCTTCTTCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred ------------------------------------------------chhhccccCCCceeeecccceecChHHHHHHH
Confidence 00112345689999999999999998888776
Q ss_pred hhcC----CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcCCCCCCC
Q 021229 264 SHLG----DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDSQPSPLP 307 (315)
Q Consensus 264 ~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~~~ 307 (315)
+.+. ...++++++|++|++. .+.+++.+.|.+||++...-++-
T Consensus 169 ~~~~~~~~~~~~~~vi~gAdHfF~-g~~~~l~~~v~~~l~~~l~~~~~ 215 (218)
T d2i3da1 169 EKLKTQKGILITHRTLPGANHFFN-GKVDELMGECEDYLDRRLNGELV 215 (218)
T ss_dssp HHHTTSTTCCEEEEEETTCCTTCT-TCHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHhhccCCCccEEEeCCCCCCCc-CCHHHHHHHHHHHHHHhcCCCCC
Confidence 6552 2358999999999876 57789999999999876554433
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.74 E-value=2.9e-17 Score=131.44 Aligned_cols=179 Identities=18% Similarity=0.196 Sum_probs=123.9
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccccceEEeecCCCCCCCCCCC------CCCCch---hHHHHHH
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIHYFNVYVPDLLFFGDSFTTR------PERSES---FQAECVM 107 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~~~vi~~D~~G~G~S~~~~------~~~~~~---~~a~~~~ 107 (315)
++... ++.+..|+||++||+|++.. .|..+.+.+..++.|++++.+..+.+.... ...... ...+.+.
T Consensus 7 ~~~~~--~~~~~~P~vi~lHG~G~~~~-~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (203)
T d2r8ba1 7 FHKSR--AGVAGAPLFVLLHGTGGDEN-QFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMA 83 (203)
T ss_dssp CEEEE--CCCTTSCEEEEECCTTCCHH-HHHHHHHHHSTTSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHH
T ss_pred EeecC--CCCCCCCEEEEECCCCCCHH-HHHHHHHHhccCCeEEEeccccccccccccccccCccccchhHHHHHHHHHH
Confidence 44443 34566899999999999886 588999999889999999777544332110 011111 1123333
Q ss_pred HHH----HHcCCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHH
Q 021229 108 RVM----EAHSVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKL 183 (315)
Q Consensus 108 ~~l----~~l~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (315)
+++ ...+.+++.++|+|+||.+++.++.++|+.+.+++++++.......
T Consensus 84 ~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~--------------------------- 136 (203)
T d2r8ba1 84 DFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK--------------------------- 136 (203)
T ss_dssp HHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC---------------------------
T ss_pred HHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeeccccccccc---------------------------
Confidence 333 3457789999999999999999999999999988877543211000
Q ss_pred HHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHH
Q 021229 184 KELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLK 263 (315)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~ 263 (315)
. .......|+++++|++|+++|.+.++.+.
T Consensus 137 ------------~--------------------------------------~~~~~~~~~~i~hG~~D~~vp~~~~~~~~ 166 (203)
T d2r8ba1 137 ------------I--------------------------------------SPAKPTRRVLITAGERDPICPVQLTKALE 166 (203)
T ss_dssp ------------C--------------------------------------CCCCTTCEEEEEEETTCTTSCHHHHHHHH
T ss_pred ------------c--------------------------------------ccccccchhhccccCCCCcccHHHHHHHH
Confidence 0 00123468999999999999999988888
Q ss_pred hhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhc
Q 021229 264 SHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 264 ~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
+.+. -+.+++++++ ||.+. +++ .+.+.+||.+
T Consensus 167 ~~L~~~g~~v~~~~~~g-gH~~~---~~~-~~~~~~wl~~ 201 (203)
T d2r8ba1 167 ESLKAQGGTVETVWHPG-GHEIR---SGE-IDAVRGFLAA 201 (203)
T ss_dssp HHHHHHSSEEEEEEESS-CSSCC---HHH-HHHHHHHHGG
T ss_pred HHHHHCCCCEEEEEECC-CCcCC---HHH-HHHHHHHHHh
Confidence 7652 2468889975 89864 444 4668899875
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.74 E-value=4.6e-17 Score=135.14 Aligned_cols=227 Identities=15% Similarity=0.126 Sum_probs=129.4
Q ss_pred eeecCCCceEEEEEecCC--CC--CCCcEEEEccCCCC----hhhhHHhhHhhc-cccceEEeecCCCCCCCCCC-----
Q 021229 28 VTDLQDGSVMHCWVPKTR--ND--SKPDLVLIHGLGAN----ALWQWTNIIPHM-IHYFNVYVPDLLFFGDSFTT----- 93 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~--~~--~~~~vvllHG~~~~----~~~~w~~~~~~l-~~~~~vi~~D~~G~G~S~~~----- 93 (315)
.....||+.+.++...+. ++ +-|.||++||.+.. ..+........+ ..+|.|+.+|+||+|.+...
T Consensus 7 ~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~~~~~~ 86 (258)
T d2bgra2 7 DFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAI 86 (258)
T ss_dssp EEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGG
T ss_pred EEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchHHHHhh
Confidence 344458988888764332 12 22688999994111 111111122223 35699999999997754311
Q ss_pred CCCCCchhHHHHHHHHHHHcC------CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccc
Q 021229 94 RPERSESFQAECVMRVMEAHS------VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSD 167 (315)
Q Consensus 94 ~~~~~~~~~a~~~~~~l~~l~------~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~ 167 (315)
...... ...+++.++++.+. .+++.++|+|+||.+++.++..+|+.+...+..+....... .. .
T Consensus 87 ~~~~~~-~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~ 156 (258)
T d2bgra2 87 NRRLGT-FEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEY---YD------S 156 (258)
T ss_dssp TTCTTS-HHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGG---SB------H
T ss_pred hhhhhh-HHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeeccccccc---cc------c
Confidence 111111 12233334444331 24699999999999999999999987665554332211100 00 0
Q ss_pred hhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccC-CCCeEEE
Q 021229 168 LEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKI-TQPTLIL 246 (315)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lvi 246 (315)
..... . ...+. .. ...+... . ......+.++ ++|+|++
T Consensus 157 --------------~~~~~---~-~~~~~----~~-~~~~~~~-----------~-------~~~~~~~~~~~~~P~li~ 195 (258)
T d2bgra2 157 --------------VYTER---Y-MGLPT----PE-DNLDHYR-----------N-------STVMSRAENFKQVEYLLI 195 (258)
T ss_dssp --------------HHHHH---H-HCCCS----TT-TTHHHHH-----------H-------SCSGGGGGGGGGSEEEEE
T ss_pred --------------cccch---h-ccccc----ch-hhHHHhh-----------c-------ccccccccccccCChhee
Confidence 00000 0 00000 00 0001000 0 0011122333 3799999
Q ss_pred EeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhcCCCCC
Q 021229 247 WGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLDSQPSP 305 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~~~ 305 (315)
+|++|..+|...++++.+.+ +.+++++++++++|.+.. +..+++.+.+.+||++.++.|
T Consensus 196 hG~~D~~Vp~~~s~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~~p 258 (258)
T d2bgra2 196 HGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 258 (258)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eecCCCcccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 99999999998888887654 346899999999997543 556788999999999887654
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.72 E-value=5e-18 Score=145.52 Aligned_cols=102 Identities=23% Similarity=0.315 Sum_probs=85.1
Q ss_pred CCCcEEEEccCCCChhh-----hHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEE
Q 021229 48 SKPDLVLIHGLGANALW-----QWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLV 121 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~-----~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lv 121 (315)
.+.||||+||++++... .|..+.+.|.+. |+|+++|+||||.|+.. .......++++.++++.++.++++||
T Consensus 7 ~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~~--~~~~~~l~~~i~~~~~~~~~~~v~lv 84 (319)
T d1cvla_ 7 TRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGP--NGRGEQLLAYVKQVLAATGATKVNLI 84 (319)
T ss_dssp CSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTST--TSHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCCC--cccHHHHHHHHHHHHHHhCCCCEEEE
Confidence 35589999999776531 377888888876 99999999999988532 33444567888999999999999999
Q ss_pred EEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 122 GLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
||||||+++..++.++|++|.++|+++++.
T Consensus 85 GhS~GG~~~~~~~~~~p~~v~~vv~i~~p~ 114 (319)
T d1cvla_ 85 GHSQGGLTSRYVAAVAPQLVASVTTIGTPH 114 (319)
T ss_dssp EETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred eccccHHHHHHHHHHCccccceEEEECCCC
Confidence 999999999999999999999999997643
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.71 E-value=9.3e-17 Score=133.56 Aligned_cols=167 Identities=15% Similarity=0.126 Sum_probs=114.4
Q ss_pred CCCcEEEEccCCCChhhhHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHH------cCCCceEE
Q 021229 48 SKPDLVLIHGLGANALWQWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEA------HSVKKLSL 120 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~------l~~~~v~l 120 (315)
.-|.||++||++++.. .+..+.+.|++. |.|+++|.+|++.... .......+.+..+.+. .+.+++.+
T Consensus 51 ~~P~Vv~~HG~~g~~~-~~~~~a~~lA~~Gy~V~~~d~~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~vD~~rI~v 125 (260)
T d1jfra_ 51 TFGAVVISPGFTAYQS-SIAWLGPRLASQGFVVFTIDTNTTLDQPD----SRGRQLLSALDYLTQRSSVRTRVDATRLGV 125 (260)
T ss_dssp CEEEEEEECCTTCCGG-GTTTHHHHHHTTTCEEEEECCSSTTCCHH----HHHHHHHHHHHHHHHTSTTGGGEEEEEEEE
T ss_pred CccEEEEECCCCCCHH-HHHHHHHHHHhCCCEEEEEeeCCCcCCch----hhHHHHHHHHHHHHhhhhhhccccccceEE
Confidence 3468999999988875 466777777754 9999999998765421 0111111122222221 23468999
Q ss_pred EEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCchHHHHHHHhhhccCCCCCCC
Q 021229 121 VGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSPGKLKELMRYTFFKRPPLSLV 200 (315)
Q Consensus 121 vGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (315)
+||||||.+++.++...| ++.++|.+.+...
T Consensus 126 ~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~------------------------------------------------ 156 (260)
T d1jfra_ 126 MGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNT------------------------------------------------ 156 (260)
T ss_dssp EEETHHHHHHHHHHHHCT-TCSEEEEESCCCS------------------------------------------------
T ss_pred EeccccchHHHHHHhhhc-cchhheeeecccc------------------------------------------------
Confidence 999999999999998876 4566554322100
Q ss_pred CcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH-HHHHHhhcC--CCcEEEEEcC
Q 021229 201 PSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL-GRRLKSHLG--DNAQLIVIKK 277 (315)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~-~~~l~~~~~--~~~~~~~i~~ 277 (315)
...+.++++|+|+|+|++|.++|.+. .+.+.+.+. ...++++++|
T Consensus 157 --------------------------------~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~g 204 (260)
T d1jfra_ 157 --------------------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPGSLDKAYLELRG 204 (260)
T ss_dssp --------------------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCTTSCEEEEEETT
T ss_pred --------------------------------cccccccccceeEEecCCCCCCCHHHHHHHHHHhcccCCCEEEEEECC
Confidence 00123567899999999999999764 555666542 2457899999
Q ss_pred CCCccccCChHHHHHHHHHHHhc
Q 021229 278 AGHAFNYEKPKEFYKHLKSFLLD 300 (315)
Q Consensus 278 ~gH~~~~e~p~~~~~~i~~fl~~ 300 (315)
++|.........+.+.+.+||+.
T Consensus 205 a~H~~~~~~~~~~~~~~~~wl~~ 227 (260)
T d1jfra_ 205 ASHFTPNTSDTTIAKYSISWLKR 227 (260)
T ss_dssp CCTTGGGSCCHHHHHHHHHHHHH
T ss_pred CccCCCCCChHHHHHHHHHHHHH
Confidence 99988776667888888888863
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.70 E-value=5.4e-16 Score=126.71 Aligned_cols=194 Identities=16% Similarity=0.214 Sum_probs=121.6
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCCCChhhhHHhhHhhccc-cceEEeecCCCCCCCCCCCCCCC--------
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLGANALWQWTNIIPHMIH-YFNVYVPDLLFFGDSFTTRPERS-------- 98 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~~~~w~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~-------- 98 (315)
.++..||..++.|...+.+++.|.||++||..+.... .......|++ +|.|+++|+.|.+..........
T Consensus 7 ~~~~~dg~~~~a~~~~P~~~~~P~vl~~h~~~G~~~~-~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~~~~~~~~~~ 85 (233)
T d1dina_ 7 SIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAF-MRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAY 85 (233)
T ss_dssp CEECTTSCEECEEEECCSSSSEEEEEEECCTTBSCHH-HHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTSHHHHHHHH
T ss_pred EEEcCCCCEEEEEEECCCCCCceEEEEeCCCCCCCHH-HHHHHHHHHhcCCcceeeeeccCCCcCcccChHHHHHHHHHH
Confidence 3555688889998876666778899999954332222 3445566654 59999999976655432211111
Q ss_pred -------chhHHHHHHHHHHHc---C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhccc
Q 021229 99 -------ESFQAECVMRVMEAH---S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKVS 166 (315)
Q Consensus 99 -------~~~~a~~~~~~l~~l---~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (315)
......++...++.+ + .++|.++|+|+||.+++.++.+. .+.+.+...+..
T Consensus 86 ~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~--------------- 148 (233)
T d1dina_ 86 KLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVG--------------- 148 (233)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSC---------------
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceeccccccc---------------
Confidence 111122333333333 2 24799999999999999887643 233333210000
Q ss_pred chhhhhhhccCCCchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEE
Q 021229 167 DLEEASKILVPQSPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLIL 246 (315)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi 246 (315)
. .. ..+.+.++++|+|++
T Consensus 149 -----------------------------~----~~-----------------------------~~~~~~~i~~Pvl~~ 166 (233)
T d1dina_ 149 -----------------------------L----EK-----------------------------QLNKVPEVKHPALFH 166 (233)
T ss_dssp -----------------------------G----GG-----------------------------GGGGGGGCCSCEEEE
T ss_pred -----------------------------c----cc-----------------------------chhhhhccCCcceee
Confidence 0 00 011234688999999
Q ss_pred EeCCCCCCchHHHHHHHhhcC--CCcEEEEEcCCCCccccCChH--------HHHHHHHHHHhcC
Q 021229 247 WGEHDQIFPLELGRRLKSHLG--DNAQLIVIKKAGHAFNYEKPK--------EFYKHLKSFLLDS 301 (315)
Q Consensus 247 ~G~~D~~~~~~~~~~l~~~~~--~~~~~~~i~~~gH~~~~e~p~--------~~~~~i~~fl~~~ 301 (315)
+|++|+.+|.+..+.+.+.+. ++.+++++||++|.+..+..+ +-.+.+.+||...
T Consensus 167 ~G~~D~~vp~e~~~~~~~~~~~~~~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~~ffa~~ 231 (233)
T d1dina_ 167 MGGQDHFVPAPSRQLITEGFGANPLLQVHWYEEAGHSFARTSSSGYVASAAALANERTLDFLAPL 231 (233)
T ss_dssp EETTCTTSCHHHHHHHHHHHTTCTTEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGG
T ss_pred ecccccCCCHHHHHHHHHHHhcCCCEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 999999999998887776543 457999999999977654432 2245666788654
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=5.5e-17 Score=136.38 Aligned_cols=99 Identities=21% Similarity=0.170 Sum_probs=81.4
Q ss_pred CCCcEEEEccCCCChhh----hHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCCceEEEE
Q 021229 48 SKPDLVLIHGLGANALW----QWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVKKLSLVG 122 (315)
Q Consensus 48 ~~~~vvllHG~~~~~~~----~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~~v~lvG 122 (315)
.+.||||+||++++... .|..+.+.|.+. |+|+++|++|+|.+. ......++++.++++..+.++++|||
T Consensus 6 ~~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~~~-----~~a~~l~~~i~~~~~~~g~~~v~lig 80 (285)
T d1ex9a_ 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSE-----VRGEQLLQQVEEIVALSGQPKVNLIG 80 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCHH-----HHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCCcH-----HHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 34579999998765421 378888888776 999999999988552 22334577788888999999999999
Q ss_pred EchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 123 LSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 123 hSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
|||||.++..++.++|++|+++|.++++.
T Consensus 81 HS~GG~~~r~~~~~~p~~v~~lv~i~tPh 109 (285)
T d1ex9a_ 81 HSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp ETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred ECccHHHHHHHHHHCCccceeEEEECCCC
Confidence 99999999999999999999999997653
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.65 E-value=1.9e-15 Score=125.38 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=112.5
Q ss_pred CCCCCcEEEEccCC----CChhhhHHhhH----hhc-cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcCCC
Q 021229 46 NDSKPDLVLIHGLG----ANALWQWTNII----PHM-IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHSVK 116 (315)
Q Consensus 46 ~~~~~~vvllHG~~----~~~~~~w~~~~----~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~~~ 116 (315)
++++++||++||.| ..+...|..+. ..+ ..+|.|+++|+|+.++... .....+..+.+..+.+..+.+
T Consensus 28 ~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~---~~~~~d~~~~~~~l~~~~~~~ 104 (263)
T d1vkha_ 28 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN---PRNLYDAVSNITRLVKEKGLT 104 (263)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT---THHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh---hHHHHhhhhhhhccccccccc
Confidence 45678999999953 11112233333 333 3459999999986554321 112223344455566677889
Q ss_pred ceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCccCchhhhhhhhcc---cchhhhhhhccCCCchHHHHHHHhhhcc
Q 021229 117 KLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVCLEEQDLRDRMFKV---SDLEEASKILVPQSPGKLKELMRYTFFK 193 (315)
Q Consensus 117 ~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (315)
+++|+|||+||.+++.++...++....+.......... .......... ......... . + ....++...+..
T Consensus 105 ~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~ 178 (263)
T d1vkha_ 105 NINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGL-LQIVKRVFLLDGIYSLKELLIE-Y---P-EYDCFTRLAFPD 178 (263)
T ss_dssp CEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHH-HTTEEEEEEESCCCCHHHHHHH-C---G-GGHHHHHHHCTT
T ss_pred ceeeeccCcHHHHHHHHHHhccCccccccccccccccc-cccccccccccccccchhhhhh-c---c-ccchhhhccccc
Confidence 99999999999999999988776433222110000000 0000000000 000000000 0 0 001111111111
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHHHHHhhcC---CCc
Q 021229 194 RPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGRRLKSHLG---DNA 270 (315)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~l~~~~~---~~~ 270 (315)
... ............ ....+.++.+|+++++|++|.++|.+.++.+.+.+. .+.
T Consensus 179 ~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~ 235 (263)
T d1vkha_ 179 GIQ---MYEEEPSRVMPY--------------------VKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSF 235 (263)
T ss_dssp CGG---GCCCCHHHHHHH--------------------HHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCE
T ss_pred ccc---cccccccccCcc--------------------ccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCE
Confidence 100 000000000000 001233567899999999999999998888877652 357
Q ss_pred EEEEEcCCCCccccCChHHHHHHHH
Q 021229 271 QLIVIKKAGHAFNYEKPKEFYKHLK 295 (315)
Q Consensus 271 ~~~~i~~~gH~~~~e~p~~~~~~i~ 295 (315)
+++++++++|...+++. ++.+.|.
T Consensus 236 ~~~~~~~~~H~~~~~~~-~~~~~i~ 259 (263)
T d1vkha_ 236 KLYLDDLGLHNDVYKNG-KVAKYIF 259 (263)
T ss_dssp EEEEECCCSGGGGGGCH-HHHHHHH
T ss_pred EEEEECCCCchhhhcCh-HHHHHHH
Confidence 99999999998777664 4555443
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=7.3e-16 Score=127.81 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=51.8
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-CChHHHHHHHHHHHhcCCC
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-EKPKEFYKHLKSFLLDSQP 303 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 303 (315)
++|+|+++|+.|..+|++.++.+.+.+ +.+.+++++|+++|.+.. +....+.+.+.+|+++.+.
T Consensus 190 ~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 190 EQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp SCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred cccccccccCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 679999999999999998887776543 246799999999997644 4456778999999998764
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.63 E-value=4e-15 Score=120.17 Aligned_cols=176 Identities=19% Similarity=0.270 Sum_probs=107.1
Q ss_pred CCCCCcEEEEccCCCChhhhHHhhHhhcccc---ceEEeecCCC--------CC-CCC----CCCCCCC--chh---HHH
Q 021229 46 NDSKPDLVLIHGLGANALWQWTNIIPHMIHY---FNVYVPDLLF--------FG-DSF----TTRPERS--ESF---QAE 104 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w~~~~~~l~~~---~~vi~~D~~G--------~G-~S~----~~~~~~~--~~~---~a~ 104 (315)
++.+++|||+||+|.+.. .|..+.+.+... +.+++++-|. .+ .+- ...+... ... ..+
T Consensus 11 ~~~~~~Vi~lHG~G~~~~-~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T d1auoa_ 11 KPADACVIWLHGLGADRY-DFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAK 89 (218)
T ss_dssp SCCSEEEEEECCTTCCTT-TTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCCChh-hHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHHH
Confidence 345678999999998875 577776666543 5677665431 10 000 0011111 111 122
Q ss_pred HHHHHHH---HcC--CCceEEEEEchhHHHHHHHHHhh-hhhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCC
Q 021229 105 CVMRVME---AHS--VKKLSLVGLSYGGFVGYSMAAQF-KEKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQ 178 (315)
Q Consensus 105 ~~~~~l~---~l~--~~~v~lvGhSmGG~ia~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (315)
.+.++++ ..+ .++++++|+||||++++.++..+ +..+.+++.+++.......
T Consensus 90 ~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~---------------------- 147 (218)
T d1auoa_ 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD---------------------- 147 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT----------------------
T ss_pred HHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccc----------------------
Confidence 2333433 223 47899999999999999988755 5567777766432211000
Q ss_pred CchHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHH
Q 021229 179 SPGKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLEL 258 (315)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 258 (315)
. . .. .. ...+.|++++||++|+++|.+.
T Consensus 148 ---------------~-~----~~--~~------------------------------~~~~~pvl~~hG~~D~vvp~~~ 175 (218)
T d1auoa_ 148 ---------------E-L----EL--SA------------------------------SQQRIPALCLHGQYDDVVQNAM 175 (218)
T ss_dssp ---------------T-C----CC--CH------------------------------HHHTCCEEEEEETTCSSSCHHH
T ss_pred ---------------c-c----cc--ch------------------------------hccCCCEEEEecCCCCccCHHH
Confidence 0 0 00 00 0124699999999999999998
Q ss_pred HHHHHhhcC---CCcEEEEEcCCCCccccCChHHHHHHHHHHHhcC
Q 021229 259 GRRLKSHLG---DNAQLIVIKKAGHAFNYEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 259 ~~~l~~~~~---~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 301 (315)
++.+++.+. .+.++.+++ +||.+. + +..+.+.+||.+.
T Consensus 176 ~~~~~~~L~~~g~~~~~~~~~-~gH~i~---~-~~~~~i~~wl~~~ 216 (218)
T d1auoa_ 176 GRSAFEHLKSRGVTVTWQEYP-MGHEVL---P-QEIHDIGAWLAAR 216 (218)
T ss_dssp HHHHHHHHHTTTCCEEEEEES-CSSSCC---H-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEEC-CCCccC---H-HHHHHHHHHHHHh
Confidence 888877653 356888886 799764 3 3456788998753
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.55 E-value=4.6e-15 Score=125.36 Aligned_cols=111 Identities=15% Similarity=0.201 Sum_probs=82.7
Q ss_pred EEEEEecCCCCCCCcEEEEccCCCChhh-hHHhhHhhcccc-ceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC
Q 021229 37 MHCWVPKTRNDSKPDLVLIHGLGANALW-QWTNIIPHMIHY-FNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS 114 (315)
Q Consensus 37 ~~~~~~~~~~~~~~~vvllHG~~~~~~~-~w~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~ 114 (315)
++.+...+ .+.+.||||+||++.+... .|..+.+.|... |.|+.+|++|+|.++. ..+..+.++.+..+++..+
T Consensus 20 ~~~~~~~p-~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d~---~~sae~la~~i~~v~~~~g 95 (317)
T d1tcaa_ 20 LTCQGASP-SSVSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDT---QVNTEYMVNAITALYAGSG 95 (317)
T ss_dssp EEETTBCT-TSCSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSCH---HHHHHHHHHHHHHHHHHTT
T ss_pred cccccCCC-CCCCCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCch---HhHHHHHHHHHHHHHHhcc
Confidence 44443322 2345689999999877542 255677887665 9999999999997742 2233345667777778888
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhh---hhceeEEeeCCC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKE---KIEKVVICCSGV 151 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~---~v~~lil~~~~~ 151 (315)
.+||+||||||||.++..++.++|+ +|+++|.+++..
T Consensus 96 ~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~ 135 (317)
T d1tcaa_ 96 NNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp SCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred CCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCC
Confidence 9999999999999999999999885 588888876543
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.48 E-value=3.2e-13 Score=111.71 Aligned_cols=185 Identities=15% Similarity=0.146 Sum_probs=109.4
Q ss_pred CceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHH-
Q 021229 34 GSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMR- 108 (315)
Q Consensus 34 g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~- 108 (315)
..++..+.+ .+...|.||++||.+ ++. ..|..+...|. .+|.|+.+|+|..+.. +.....+++.+
T Consensus 49 ~~~lDiy~P--~~~~~P~vv~iHGG~w~~g~~-~~~~~~a~~l~~~G~~Vv~~~YRl~p~~-------~~p~~~~d~~~a 118 (261)
T d2pbla1 49 RHKFDLFLP--EGTPVGLFVFVHGGYWMAFDK-SSWSHLAVGALSKGWAVAMPSYELCPEV-------RISEITQQISQA 118 (261)
T ss_dssp TCEEEEECC--SSSCSEEEEEECCSTTTSCCG-GGCGGGGHHHHHTTEEEEEECCCCTTTS-------CHHHHHHHHHHH
T ss_pred CeEEEEecc--CCCCCCeEEEECCCCCccCCh-hHhhhHHHHHhcCCceeecccccccccc-------cCchhHHHHHHH
Confidence 456777764 344578999999953 233 24555666665 4599999999965432 22222333332
Q ss_pred --HHHHcCCCceEEEEEchhHHHHHHHHHhhh------hhhceeEEeeCCCccCchhhhhhhhcccchhhhhhhccCCCc
Q 021229 109 --VMEAHSVKKLSLVGLSYGGFVGYSMAAQFK------EKIEKVVICCSGVCLEEQDLRDRMFKVSDLEEASKILVPQSP 180 (315)
Q Consensus 109 --~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p------~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (315)
++.....+++.|+|||.||.++..++...+ ..+++++.+++.....+.. .. .
T Consensus 119 ~~~~~~~~~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~------------- 178 (261)
T d2pbla1 119 VTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLL--RT-----S------------- 178 (261)
T ss_dssp HHHHHHHSCSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGG--GS-----T-------------
T ss_pred HHHHHhcccCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhh--hh-----h-------------
Confidence 333334579999999999999877654321 2355666554332221100 00 0
Q ss_pred hHHHHHHHhhhccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhccCccccccccccCCCCeEEEEeCCCCCCchHHHH
Q 021229 181 GKLKELMRYTFFKRPPLSLVPSCLLSDYIDAMCTEYLEEKRELVRAIPKDRKISNIDKITQPTLILWGEHDQIFPLELGR 260 (315)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 260 (315)
..+. + . .. .+. ... ........+...|+++++|++|..++.+.++
T Consensus 179 --~~~~----~-~------~~----~~~-----------~~~-------~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~ 223 (261)
T d2pbla1 179 --MNEK----F-K------MD----ADA-----------AIA-------ESPVEMQNRYDAKVTVWVGGAERPAFLDQAI 223 (261)
T ss_dssp --THHH----H-C------CC----HHH-----------HHH-------TCGGGCCCCCSCEEEEEEETTSCHHHHHHHH
T ss_pred --hccc----c-c------CC----HHH-----------HHH-------hCchhhcccCCCeEEEEEecCCCchHHHHHH
Confidence 0000 0 0 00 000 000 0122234567799999999999988888899
Q ss_pred HHHhhcCCCcEEEEEcCCCCccccC
Q 021229 261 RLKSHLGDNAQLIVIKKAGHAFNYE 285 (315)
Q Consensus 261 ~l~~~~~~~~~~~~i~~~gH~~~~e 285 (315)
.+.+.+ +++.+++++.+|+-.++
T Consensus 224 ~~~~~l--~~~~~~~~~~~HF~vi~ 246 (261)
T d2pbla1 224 WLVEAW--DADHVIAFEKHHFNVIE 246 (261)
T ss_dssp HHHHHH--TCEEEEETTCCTTTTTG
T ss_pred HHHHHh--CCCceEeCCCCchhHHH
Confidence 998887 46888999999976443
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.41 E-value=1.2e-11 Score=106.48 Aligned_cols=124 Identities=13% Similarity=0.170 Sum_probs=86.7
Q ss_pred eeecCCCceEEEEEecCC-CCCCCcEEEEccCCCChhhhHH---hhHhhc-cccceEEeecCCCCCCCCCCC-CCCCchh
Q 021229 28 VTDLQDGSVMHCWVPKTR-NDSKPDLVLIHGLGANALWQWT---NIIPHM-IHYFNVYVPDLLFFGDSFTTR-PERSESF 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~-~~~~~~vvllHG~~~~~~~~w~---~~~~~l-~~~~~vi~~D~~G~G~S~~~~-~~~~~~~ 101 (315)
.|...||+++......+. +++-|+||+.||++......+. .....| .++|.|+++|.||+|.|.... .......
T Consensus 9 ~ipmrDGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G~~~~~~~~~~ 88 (347)
T d1ju3a2 9 MVPMRDGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVPHVDDEA 88 (347)
T ss_dssp EEECTTSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCSCCCTTTTHHH
T ss_pred EEECCCCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCCccccccchhh
Confidence 466679999888654333 3345678888997653211222 233344 456999999999999997543 2223333
Q ss_pred HHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 102 QAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 102 ~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
...++.+++..+.. .+|.++|+|+||.+++.+|...|..++.++...+..
T Consensus 89 d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~ 140 (347)
T d1ju3a2 89 DAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASA 140 (347)
T ss_dssp HHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCS
T ss_pred hHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcccccceeeeeccccc
Confidence 45667777777653 589999999999999999999888888888766544
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.38 E-value=1.1e-10 Score=99.04 Aligned_cols=113 Identities=16% Similarity=0.134 Sum_probs=64.1
Q ss_pred ceeeeeeec--CCCc-eEE--EEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhc-cc-cceEEeecCCCCCCCCC
Q 021229 23 GFRSSVTDL--QDGS-VMH--CWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHM-IH-YFNVYVPDLLFFGDSFT 92 (315)
Q Consensus 23 ~~~~~~~~~--~~g~-~~~--~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l-~~-~~~vi~~D~~G~G~S~~ 92 (315)
+.+...+++ .+|. .+. ++.+...++..|.||++||.| ++... ...+...+ .+ +|.|+.+|+|...+...
T Consensus 47 ~v~~~~~~~~~~~g~~~i~~~~~~P~~~~~~~Pvvv~iHGGG~~~g~~~~-~~~~~~~la~~~G~~V~~vdYrl~pe~~~ 125 (317)
T d1lzla_ 47 GVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES-SDPFCVEVARELGFAVANVEYRLAPETTF 125 (317)
T ss_dssp TEEEEEEEECCSTTCCCEEEEEEEESSCCSCEEEEEEECCSTTTSCCGGG-GHHHHHHHHHHHCCEEEEECCCCTTTSCT
T ss_pred CceEEEEEEecCCCCceEEEEEECCCCCCCCCcEEEEecCcccccccccc-cchHHHhHHhhcCCccccccccccccccc
Confidence 344444444 4553 344 444432233446799999954 23332 33444444 33 69999999997654321
Q ss_pred CCCCCCchhH---HHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhh
Q 021229 93 TRPERSESFQ---AECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 93 ~~~~~~~~~~---a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
+ ....+. ...+.+..+.+++ ++|.|+|+|.||.+++.++.+.++
T Consensus 126 ~---~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~ 174 (317)
T d1lzla_ 126 P---GPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARD 174 (317)
T ss_dssp T---HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred c---ccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhh
Confidence 1 111111 1222233344443 579999999999999999887654
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.28 E-value=1.1e-10 Score=98.86 Aligned_cols=118 Identities=17% Similarity=0.152 Sum_probs=64.1
Q ss_pred eeecCCCceEEEEEecCCCCCCCcEEEEccCC---CChhhhHHhhHhhc-cc-cceEEeecCCCCCCCCCCCCCCCchh-
Q 021229 28 VTDLQDGSVMHCWVPKTRNDSKPDLVLIHGLG---ANALWQWTNIIPHM-IH-YFNVYVPDLLFFGDSFTTRPERSESF- 101 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~~~~~~vvllHG~~---~~~~~~w~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~- 101 (315)
++..++| .+.++...+ .++.|.||++||.| ++... ...+...+ +. ++.|+.+|+|...+.. .+. ....
T Consensus 60 ~i~~~~g-~i~~~iy~P-~~~~P~il~iHGGg~~~g~~~~-~~~~~~~l~~~~g~~Vv~v~Yrlap~~~--~p~-~~~d~ 133 (311)
T d1jjia_ 60 TIKGRNG-DIRVRVYQQ-KPDSPVLVYYHGGGFVICSIES-HDALCRRIARLSNSTVVSVDYRLAPEHK--FPA-AVYDC 133 (311)
T ss_dssp EEEETTE-EEEEEEEES-SSSEEEEEEECCSTTTSCCTGG-GHHHHHHHHHHHTSEEEEEECCCTTTSC--TTH-HHHHH
T ss_pred EEeCCCC-cEEEEEEcC-CCCceEEEEEcCCCCccCChhh-hhhhhhhhhhcCCcEEEEeccccccccc--cch-hhhhh
Confidence 3444555 234333222 34567899999964 22222 33344444 32 6999999998532221 111 1111
Q ss_pred --HHHHHHHHHHHcCC--CceEEEEEchhHHHHHHHHHhhhhh----hceeEEeeCCC
Q 021229 102 --QAECVMRVMEAHSV--KKLSLVGLSYGGFVGYSMAAQFKEK----IEKVVICCSGV 151 (315)
Q Consensus 102 --~a~~~~~~l~~l~~--~~v~lvGhSmGG~ia~~~a~~~p~~----v~~lil~~~~~ 151 (315)
....+.+-.+.+++ +++.|+|+|.||.+++.++....+. ..+.+++.+..
T Consensus 134 ~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~ 191 (311)
T d1jjia_ 134 YDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVV 191 (311)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCC
T ss_pred hhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeeccee
Confidence 11122233334443 5899999999999998887765542 34555555444
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.28 E-value=4.3e-10 Score=92.87 Aligned_cols=64 Identities=20% Similarity=0.194 Sum_probs=47.2
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhc----------CCCcEEEEEcCCCCccccCChH--HHHHHHHHHHhcCCC
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHL----------GDNAQLIVIKKAGHAFNYEKPK--EFYKHLKSFLLDSQP 303 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~----------~~~~~~~~i~~~gH~~~~e~p~--~~~~~i~~fl~~~~~ 303 (315)
..|+|++||++|..||...++++.+.+ +..+++++++++||.+.-...+ +....+.+||++.++
T Consensus 200 ~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~ 275 (280)
T d1qfma2 200 YPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 275 (280)
T ss_dssp CCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999888887766 3347899999999976433222 333457789876543
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.27 E-value=1.2e-10 Score=100.60 Aligned_cols=119 Identities=17% Similarity=0.067 Sum_probs=68.1
Q ss_pred eeecCCCceEEEE--EecCCCCCCCcEEEEccCCC---Ch-hhhHHhhHhhcc-ccceEEeecCCCCCCCCCCCCCCCch
Q 021229 28 VTDLQDGSVMHCW--VPKTRNDSKPDLVLIHGLGA---NA-LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTRPERSES 100 (315)
Q Consensus 28 ~~~~~~g~~~~~~--~~~~~~~~~~~vvllHG~~~---~~-~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~ 100 (315)
++...||..+..+ .+...++..|.||++||.|. +. ...+......+. .++.|+.+|+|..+... ++....
T Consensus 83 ~i~~~dg~~i~~~iy~P~~~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~---pe~~~p 159 (358)
T d1jkma_ 83 TILGVDGNEITLHVFRPAGVEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE---GHHPFP 159 (358)
T ss_dssp EEECTTSCEEEEEEEEETTCCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT---EECCTT
T ss_pred EEeCCCCCEEEEEEEecCCCCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccc---ccCCCc
Confidence 4444677655554 43322334567899999643 21 122444555554 45999999999753321 111111
Q ss_pred hHHHHHH---HH----HHHcCCCceEEEEEchhHHHHHHHHHhhh-----hhhceeEEeeC
Q 021229 101 FQAECVM---RV----MEAHSVKKLSLVGLSYGGFVGYSMAAQFK-----EKIEKVVICCS 149 (315)
Q Consensus 101 ~~a~~~~---~~----l~~l~~~~v~lvGhSmGG~ia~~~a~~~p-----~~v~~lil~~~ 149 (315)
...+++. .+ ...++.+++.|+|+|.||.+|+.++.... ..+.++++..+
T Consensus 160 ~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p 220 (358)
T d1jkma_ 160 SGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIP 220 (358)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESC
T ss_pred hhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccc
Confidence 1222222 22 23457789999999999999988876532 34555665544
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.27 E-value=1.2e-10 Score=95.55 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=32.4
Q ss_pred CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 115 VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 115 ~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
.+++.++|+||||..++.++.++|+++.+++.+++..
T Consensus 134 ~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~ 170 (255)
T d1jjfa_ 134 REHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 170 (255)
T ss_dssp GGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred cceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCc
Confidence 3569999999999999999999999999998776543
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.22 E-value=4.4e-11 Score=101.01 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=41.6
Q ss_pred CCeEEEEeCCCCCCchHHHHHHHhhc---CCCcEEEEEcCCCCcccc-C--Ch--HHHHHHHHHHHhcC
Q 021229 241 QPTLILWGEHDQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNY-E--KP--KEFYKHLKSFLLDS 301 (315)
Q Consensus 241 ~P~lvi~G~~D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~-e--~p--~~~~~~i~~fl~~~ 301 (315)
.|+++++|+.|..++ .++.+++.+ +..++++++++++|.+.. . .| ++..+.+.+||++.
T Consensus 240 Pp~li~~g~~D~l~~--~~~~~~~~L~~~G~~v~~~~~~g~~Hgf~~~~~~~~~a~~~~~~~~~fl~~~ 306 (308)
T d1u4na_ 240 PPAYIATAQYDPLRD--VGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDA 306 (308)
T ss_dssp CCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTGGGGTTTSHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEecCcCCchH--HHHHHHHHHHHCCCCEEEEEECCCCEeCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 489999999997764 344454443 346899999999995432 2 23 46778888898754
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.20 E-value=1.7e-09 Score=93.99 Aligned_cols=126 Identities=12% Similarity=0.025 Sum_probs=80.3
Q ss_pred eeeeecCCCceEEEEEecC-CCCCCCcEEEEccCCCChh------hhH----HhhHhhcc-ccceEEeecCCCCCCCCCC
Q 021229 26 SSVTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANAL------WQW----TNIIPHMI-HYFNVYVPDLLFFGDSFTT 93 (315)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~~------~~w----~~~~~~l~-~~~~vi~~D~~G~G~S~~~ 93 (315)
+..+...||+++......+ +.++-|+||+.|+++.+.. ..+ ....+.|. ++|-|+.+|.||+|.|...
T Consensus 26 ~v~i~~rDG~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~ 105 (381)
T d1mpxa2 26 EVMIPMRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGD 105 (381)
T ss_dssp EEEEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSC
T ss_pred EEEEECCCCCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCCc
Confidence 3456668999988654333 3444577788888754211 001 11223344 4599999999999999743
Q ss_pred CCC----------CC--chhHHHHHHHHHHHcC-C--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 94 RPE----------RS--ESFQAECVMRVMEAHS-V--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 94 ~~~----------~~--~~~~a~~~~~~l~~l~-~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
... .. +.....++.+++.... + .+|.++|+|+||.+++.+|...|..++++|...+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~~~~ 178 (381)
T d1mpxa2 106 YVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMI 178 (381)
T ss_dssp CCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCC
T ss_pred eeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeecccc
Confidence 211 01 1112233444454442 3 589999999999999999999998898888765543
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.18 E-value=2.1e-09 Score=94.11 Aligned_cols=77 Identities=17% Similarity=0.060 Sum_probs=55.9
Q ss_pred cccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHcC--------------------CCceEEEEEchhHHHHHHH
Q 021229 74 IHYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAHS--------------------VKKLSLVGLSYGGFVGYSM 133 (315)
Q Consensus 74 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l~--------------------~~~v~lvGhSmGG~ia~~~ 133 (315)
.++|.|+.+|.||.|.|.......... .+++..++++=+. ..+|.++|+|+||..++.+
T Consensus 134 ~~GYavv~~D~RG~g~S~G~~~~~~~~-e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~a 212 (405)
T d1lnsa3 134 TRGFASIYVAGVGTRSSDGFQTSGDYQ-QIYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGA 212 (405)
T ss_dssp TTTCEEEEECCTTSTTSCSCCCTTSHH-HHHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHH
T ss_pred hCCCEEEEECCCCCCCCCCccccCChh-hhhhHHHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHH
Confidence 456999999999999997653333222 2344444444332 1379999999999999999
Q ss_pred HHhhhhhhceeEEeeCCC
Q 021229 134 AAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 134 a~~~p~~v~~lil~~~~~ 151 (315)
|...|..++++|...+..
T Consensus 213 A~~~pp~LkAivp~~~~~ 230 (405)
T d1lnsa3 213 ATTGVEGLELILAEAGIS 230 (405)
T ss_dssp HTTTCTTEEEEEEESCCS
T ss_pred HhcCCccceEEEecCccc
Confidence 999988899988765544
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.05 E-value=3.4e-11 Score=99.05 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=66.5
Q ss_pred CcEEEEccCCCChh--hhHHhhHhhccc---cceEEeecCCCCCCCCCC-CCCCCchhHHHHHHHHHHHc--CCCceEEE
Q 021229 50 PDLVLIHGLGANAL--WQWTNIIPHMIH---YFNVYVPDLLFFGDSFTT-RPERSESFQAECVMRVMEAH--SVKKLSLV 121 (315)
Q Consensus 50 ~~vvllHG~~~~~~--~~w~~~~~~l~~---~~~vi~~D~~G~G~S~~~-~~~~~~~~~a~~~~~~l~~l--~~~~v~lv 121 (315)
.||||+||+++++. ..|..+...+.+ ++.|+++|+.....++.. ........+++.+.+.+++. +.+++++|
T Consensus 6 ~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~~~~~~~~~~~~~~~~e~v~~~I~~~~~~~~~v~lV 85 (279)
T d1ei9a_ 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQGYNAM 85 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHHHHHHHHHHSCHHHHHHHHHHHHHSCGGGTTCEEEE
T ss_pred CcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcccccccchhhhHHHHHHHHHHHHHhccccccceeEE
Confidence 38999999986532 246666666553 578999998532222100 01112233455555555432 34689999
Q ss_pred EEchhHHHHHHHHHhhhh-hhceeEEeeCC
Q 021229 122 GLSYGGFVGYSMAAQFKE-KIEKVVICCSG 150 (315)
Q Consensus 122 GhSmGG~ia~~~a~~~p~-~v~~lil~~~~ 150 (315)
||||||.++-.++.+++. .|..+|.++++
T Consensus 86 GhSqGGLiaR~~i~~~~~~~V~~lITLgsP 115 (279)
T d1ei9a_ 86 GFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp EETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred EEccccHHHHHHHHHcCCCCcceEEEECCC
Confidence 999999999999999876 58898888654
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.00 E-value=8.3e-11 Score=99.03 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=64.7
Q ss_pred CCCCCcEEEEccCCCChhhhH-HhhHhhc-cc-cceEEeecCCCCCCCCCCCCCCCc-----hhHHHHHHHH----HHHc
Q 021229 46 NDSKPDLVLIHGLGANALWQW-TNIIPHM-IH-YFNVYVPDLLFFGDSFTTRPERSE-----SFQAECVMRV----MEAH 113 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w-~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~-----~~~a~~~~~~----l~~l 113 (315)
+.++|++++||||..+....| ..+...+ .. +++||++|+... +. ..+.. ...++.+.++ ++..
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~--a~---~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~ 141 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKG--SQ---TSYTQAANNVRVVGAQVAQMLSMLSANY 141 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHH--HS---SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccc--cC---cchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456889999999976653333 3444443 33 499999999642 11 12211 1112333333 4444
Q ss_pred C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 114 S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 114 ~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+ .++++|||||+||.||-.. .++..++.+++.++++.+
T Consensus 142 g~~~~~vhlIGhSLGAhvAG~a-G~~~~~l~rItgLDPA~P 181 (337)
T d1rp1a2 142 SYSPSQVQLIGHSLGAHVAGEA-GSRTPGLGRITGLDPVEA 181 (337)
T ss_dssp CCCGGGEEEEEETHHHHHHHHH-HHTSTTCCEEEEESCCCT
T ss_pred CCChhheEEEeecHHHhhhHHH-HHhhccccceeccCCCcc
Confidence 4 5799999999999999655 455567899988886554
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.95 E-value=4.9e-09 Score=86.99 Aligned_cols=126 Identities=16% Similarity=0.118 Sum_probs=78.4
Q ss_pred cceeeeeeec---CCCceEEEEEecCCCCCCCcEEEEccCCC--ChhhhHHh---hHhhcc-ccceEEeecCCCCCC-CC
Q 021229 22 LGFRSSVTDL---QDGSVMHCWVPKTRNDSKPDLVLIHGLGA--NALWQWTN---IIPHMI-HYFNVYVPDLLFFGD-SF 91 (315)
Q Consensus 22 ~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~vvllHG~~~--~~~~~w~~---~~~~l~-~~~~vi~~D~~G~G~-S~ 91 (315)
.|+...++++ ..|-.+.+... .++.|+|+|+||.++ +.. .|.. +.+.+. ..+-|+.||-...+. +.
T Consensus 2 ~~~~v~~~~~~s~~~~r~i~~~~~---~~~~p~lyllhG~~g~~d~~-~W~~~~~~~~~~~~~~~ivV~P~~~~~~~~~~ 77 (280)
T d1dqza_ 2 PGLPVEYLQVPSASMGRDIKVQFQ---GGGPHAVYLLDGLRAQDDYN-GWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD 77 (280)
T ss_dssp CSSCEEEEEEEETTTTEEEEEEEE---CCSSSEEEECCCTTCCSSSC-HHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB
T ss_pred CCcEEEEEEEecccCCCcceEEee---CCCCCEEEECCCCCCCCccc-hhhhcchHHHHHHhCCcEEEEECCCCCCcCcc
Confidence 3555555555 23444444443 345688999999764 222 4553 223333 348899998532111 11
Q ss_pred C--C----CCC---CCchhHHHHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 92 T--T----RPE---RSESFQAECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 92 ~--~----~~~---~~~~~~a~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
. + ... ....+..+++...+++. +.+++.+.|+||||..|+.+|.++|+++.+++.+++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~ 149 (280)
T d1dqza_ 78 WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFL 149 (280)
T ss_dssp CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCC
T ss_pred ccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCcc
Confidence 0 0 011 12234566777777654 44678999999999999999999999999999887654
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.94 E-value=2.1e-10 Score=96.32 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=68.3
Q ss_pred CCCCCcEEEEccCCCChhhhH-HhhHhhc-c-ccceEEeecCCCCCCCCCCCCCCCch-----hHHHHHHHHH----HHc
Q 021229 46 NDSKPDLVLIHGLGANALWQW-TNIIPHM-I-HYFNVYVPDLLFFGDSFTTRPERSES-----FQAECVMRVM----EAH 113 (315)
Q Consensus 46 ~~~~~~vvllHG~~~~~~~~w-~~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~-----~~a~~~~~~l----~~l 113 (315)
+.++|++++||||..+....| ..+.+.+ . .+++||++|+... +. ..+... ..++.+.+++ +..
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~--a~---~~Y~~a~~n~~~Vg~~ia~~i~~l~~~~ 141 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRG--SR---TEYTQASYNTRVVGAEIAFLVQVLSTEM 141 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHH--HS---SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhh--cc---cchHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 456889999999976653333 3444443 3 3499999999642 11 112111 1123334444 333
Q ss_pred C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 114 S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 114 ~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+ .++++|||||+||.||-.++.+.+.++.+++-++++.+
T Consensus 142 g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P 182 (338)
T d1bu8a2 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEP 182 (338)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCT
T ss_pred CCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcC
Confidence 3 58999999999999999999888888999998886543
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=98.93 E-value=2.6e-09 Score=86.86 Aligned_cols=50 Identities=14% Similarity=0.273 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHc---C--CCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 102 QAECVMRVMEAH---S--VKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 102 ~a~~~~~~l~~l---~--~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
..+++..+++.. . .+++.++|+||||..|+.++.++|+.+.+++.+++..
T Consensus 104 ~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~ 158 (246)
T d3c8da2 104 VQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSY 158 (246)
T ss_dssp HHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCT
T ss_pred HHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCccc
Confidence 345555556553 1 2578999999999999999999999999998876543
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.92 E-value=9.5e-09 Score=85.46 Aligned_cols=130 Identities=16% Similarity=0.130 Sum_probs=80.1
Q ss_pred hcceeeeeeec---CCCceEEEEEecCCCCCCCcEEEEccCCCCh-hhhHHh---hHhhccc-cceEEeecCCCCCCCCC
Q 021229 21 RLGFRSSVTDL---QDGSVMHCWVPKTRNDSKPDLVLIHGLGANA-LWQWTN---IIPHMIH-YFNVYVPDLLFFGDSFT 92 (315)
Q Consensus 21 ~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~vvllHG~~~~~-~~~w~~---~~~~l~~-~~~vi~~D~~G~G~S~~ 92 (315)
+-|+...++++ ..|..+.+....+ ++..|.|+|+||++++. ...|.. +...+.+ .+.++++|..+.+....
T Consensus 4 ~~~~~v~~~~~~s~~~~r~~~~~v~~p-~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 82 (288)
T d1sfra_ 4 RPGLPVEYLQVPSPSMGRDIKVQFQSG-GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSD 82 (288)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEECC-STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCB
T ss_pred CCCCEEEEEEEECCCCCcEEEEEEeCC-CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCcc
Confidence 34454444444 2344555555433 45678899999977532 123543 2333333 37888998776543322
Q ss_pred CC-C---------CCCchhHHHHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 93 TR-P---------ERSESFQAECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 93 ~~-~---------~~~~~~~a~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
.. + .....+..+++...+++. +.+++.++|+||||..|+.++.++|+++.+++.+++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~ 154 (288)
T d1sfra_ 83 WYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLL 154 (288)
T ss_dssp CSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCS
T ss_pred ccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcc
Confidence 11 1 111233455555555443 34579999999999999999999999999998886554
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.87 E-value=2e-08 Score=82.61 Aligned_cols=116 Identities=12% Similarity=0.143 Sum_probs=73.7
Q ss_pred CCceEEEEEecCCCCCCCcEEEEccCCC--ChhhhHHhh---Hhhcc-ccceEEeecCCCCC-CCCCCC--CCCCchhHH
Q 021229 33 DGSVMHCWVPKTRNDSKPDLVLIHGLGA--NALWQWTNI---IPHMI-HYFNVYVPDLLFFG-DSFTTR--PERSESFQA 103 (315)
Q Consensus 33 ~g~~~~~~~~~~~~~~~~~vvllHG~~~--~~~~~w~~~---~~~l~-~~~~vi~~D~~G~G-~S~~~~--~~~~~~~~a 103 (315)
.|-.+.+.... +..|+|+|+||.++ +.. .|... .+... ..+-|+.+|--..+ .++... ......+..
T Consensus 14 ~~r~~~~~v~~---~~~pvlylLhG~~g~~~~~-~w~~~~~~~~~~~~~~~iVV~p~g~~~~~y~~~~~~~~~~~~tfl~ 89 (267)
T d1r88a_ 14 MGRDIPVAFLA---GGPHAVYLLDAFNAGPDVS-NWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLS 89 (267)
T ss_dssp TTEEEEEEEEC---CSSSEEEEECCSSCCSSSC-HHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHH
T ss_pred CCceeeEEEEC---CCCCEEEEcCCCCCCCCcc-hhhhccHHHHHHhhCCeEEEEECCCCCcCCccccccccccHHHHHH
Confidence 45455655542 34589999999754 332 46543 23332 33788888742111 111111 112234556
Q ss_pred HHHHHHHHHc---CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCCc
Q 021229 104 ECVMRVMEAH---SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGVC 152 (315)
Q Consensus 104 ~~~~~~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~~ 152 (315)
+++...+++. ..+++.+.|+||||..|+.+|.++|+++.+++.+++...
T Consensus 90 ~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~ 141 (267)
T d1r88a_ 90 AELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLY 141 (267)
T ss_dssp THHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCC
T ss_pred HHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccC
Confidence 6777777653 346789999999999999999999999999998876543
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=1.1e-06 Score=77.55 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=79.8
Q ss_pred eeecCCCceEEEEEecCCC--CCCCcEEEEccCCCChhhhHHhhHhh-----------c-------cccceEEeecCC-C
Q 021229 28 VTDLQDGSVMHCWVPKTRN--DSKPDLVLIHGLGANALWQWTNIIPH-----------M-------IHYFNVYVPDLL-F 86 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~~~--~~~~~vvllHG~~~~~~~~w~~~~~~-----------l-------~~~~~vi~~D~~-G 86 (315)
++.++++..++||...+.+ .+.|.++.+-|.+++++ .|..+.+. + .+...++.+|+| |
T Consensus 25 yl~~~~~~~lffw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~anllfIDqPvG 103 (452)
T d1ivya_ 25 YLKSSGSKHLHYWFVESQKDPENSPVVLWLNGGPGCSS-LDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAG 103 (452)
T ss_dssp EEECSTTEEEEEEEECCSSCGGGSCEEEEECCTTTBCT-HHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeecCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHHHHHccCCcEEcCCCCeeccCCcchhcccCEEEEecCCC
Confidence 5777778889999876543 35678899999877765 35433211 1 122689999986 9
Q ss_pred CCCCCCCCCC--CCchhHHHHHHH----HHHHc---CCCceEEEEEchhHHHHHHHHHhh----hhhhceeEEeeCCC
Q 021229 87 FGDSFTTRPE--RSESFQAECVMR----VMEAH---SVKKLSLVGLSYGGFVGYSMAAQF----KEKIEKVVICCSGV 151 (315)
Q Consensus 87 ~G~S~~~~~~--~~~~~~a~~~~~----~l~~l---~~~~v~lvGhSmGG~ia~~~a~~~----p~~v~~lil~~~~~ 151 (315)
.|.|...... .+....+.++.+ +++.. ...+++|.|-|.||.-+-.+|... +-.++++++.++..
T Consensus 104 tGfS~~~~~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng~~ 181 (452)
T d1ivya_ 104 VGFSYSDDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLS 181 (452)
T ss_dssp STTCEESSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCS
T ss_pred cccccCCCCCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCCcc
Confidence 9998643322 222333444444 44433 345899999999998887777653 22467887766544
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=4.4e-06 Score=72.86 Aligned_cols=123 Identities=17% Similarity=0.174 Sum_probs=79.0
Q ss_pred eeecCC-CceEEEEEecCCC--CCCCcEEEEccCCCChhhhHHhhHhh----------c-------cccceEEeecCC-C
Q 021229 28 VTDLQD-GSVMHCWVPKTRN--DSKPDLVLIHGLGANALWQWTNIIPH----------M-------IHYFNVYVPDLL-F 86 (315)
Q Consensus 28 ~~~~~~-g~~~~~~~~~~~~--~~~~~vvllHG~~~~~~~~w~~~~~~----------l-------~~~~~vi~~D~~-G 86 (315)
++.+.+ +..++||...+.+ .+.|.|+.+-|.++++.. |..+.+. + .+...++.+|.| |
T Consensus 20 yl~v~~~~~~lfyw~~~s~~~~~~~Pl~~WlnGGPG~SS~-~g~~~e~GP~~i~~~~~~~~N~~sW~~~anllfiD~PvG 98 (421)
T d1wpxa1 20 YLDVEDEDKHFFFWTFESRNDPAKDPVILWLNGGPGCSSL-TGLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVN 98 (421)
T ss_dssp EEECTTSCCEEEEEEECCSSCTTTSCEEEEECCTTTBCTH-HHHHHTTSSEEECTTSCEEECTTCGGGSSEEEEECCSTT
T ss_pred eeecCCCCceEEEEEEEeCCCCCCCCEEEEECCCCcHHHH-HHHHHhcCCcEECCCCccccCCcccccccCEEEEecCCC
Confidence 577754 5689999865432 456788999998777653 6544321 1 223689999966 9
Q ss_pred CCCCCCCCCC-CCchhHHHHHHHHHHH----c-----CCCceEEEEEchhHHHHHHHHHhh---h---hhhceeEEeeCC
Q 021229 87 FGDSFTTRPE-RSESFQAECVMRVMEA----H-----SVKKLSLVGLSYGGFVGYSMAAQF---K---EKIEKVVICCSG 150 (315)
Q Consensus 87 ~G~S~~~~~~-~~~~~~a~~~~~~l~~----l-----~~~~v~lvGhSmGG~ia~~~a~~~---p---~~v~~lil~~~~ 150 (315)
.|.|...... .+....++++.++++. . ...+++|.|-|.||..+-.+|.+. . -.++++++.++.
T Consensus 99 tGfSy~~~~~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~ 178 (421)
T d1wpxa1 99 VGFSYSGSSGVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGL 178 (421)
T ss_dssp STTCBCSSCCCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCC
T ss_pred CCceecCCccccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCc
Confidence 9999644332 2333345555555532 2 235799999999998888777653 2 136677776654
Q ss_pred C
Q 021229 151 V 151 (315)
Q Consensus 151 ~ 151 (315)
.
T Consensus 179 ~ 179 (421)
T d1wpxa1 179 T 179 (421)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.75 E-value=9.2e-07 Score=73.46 Aligned_cols=100 Identities=13% Similarity=0.193 Sum_probs=60.5
Q ss_pred CCcEEEEccCCCChhhhHHhh--Hhhccc--cceEEeecCCC----------------CCCCCCCCC--------CCCch
Q 021229 49 KPDLVLIHGLGANALWQWTNI--IPHMIH--YFNVYVPDLLF----------------FGDSFTTRP--------ERSES 100 (315)
Q Consensus 49 ~~~vvllHG~~~~~~~~w~~~--~~~l~~--~~~vi~~D~~G----------------~G~S~~~~~--------~~~~~ 100 (315)
-|.|+||||++++.. .|... +..... +..|+.++... .+.+..... .....
T Consensus 49 yPVLYlLhG~~~~~~-~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~ 127 (299)
T d1pv1a_ 49 IPTVFYLSGLTCTPD-NASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYD 127 (299)
T ss_dssp BCEEEEECCTTCCHH-HHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHH
T ss_pred CCEEEEcCCCCCCHH-HHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCCccccccccCCcccccchHH
Confidence 578899999988875 46432 222222 25677776432 122211110 01123
Q ss_pred hHHHHHHHHHHHc-CC---------CceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeC
Q 021229 101 FQAECVMRVMEAH-SV---------KKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCS 149 (315)
Q Consensus 101 ~~a~~~~~~l~~l-~~---------~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~ 149 (315)
+..+++..+++.. .. ++..|.||||||.-|+.+|.++ |++..++..+++
T Consensus 128 ~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s~s~ 188 (299)
T d1pv1a_ 128 YIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAP 188 (299)
T ss_dssp HHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEEESC
T ss_pred HHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEeeccC
Confidence 4456666666543 22 4688999999999999999874 777777765544
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=98.65 E-value=1.2e-07 Score=82.10 Aligned_cols=124 Identities=12% Similarity=0.001 Sum_probs=77.5
Q ss_pred eeecCCCceEEEEEecC-CCCCCCcEEEEccCCCCh-----------hhhHHhhHhhcc-ccceEEeecCCCCCCCCCCC
Q 021229 28 VTDLQDGSVMHCWVPKT-RNDSKPDLVLIHGLGANA-----------LWQWTNIIPHMI-HYFNVYVPDLLFFGDSFTTR 94 (315)
Q Consensus 28 ~~~~~~g~~~~~~~~~~-~~~~~~~vvllHG~~~~~-----------~~~w~~~~~~l~-~~~~vi~~D~~G~G~S~~~~ 94 (315)
.|...||++++.....+ +.++-|+||+.|+++... ..........|+ ++|-|+.+|.||+|.|....
T Consensus 32 ~ipmrDG~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G~~ 111 (385)
T d2b9va2 32 MVPMRDGVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQGDY 111 (385)
T ss_dssp EEECTTSCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EEECCCCCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCCCce
Confidence 35557999988754333 334455666667664211 001112233444 46999999999999997532
Q ss_pred CCC------------CchhHHHHHHHHHHHcC-C--CceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 95 PER------------SESFQAECVMRVMEAHS-V--KKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 95 ~~~------------~~~~~a~~~~~~l~~l~-~--~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
... .+.....++.+++.... + .+|.++|+|+||.+++.+|...|..++.++...+..
T Consensus 112 ~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~~~~~ 183 (385)
T d2b9va2 112 VMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMV 183 (385)
T ss_dssp CTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECC
T ss_pred eeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEecccc
Confidence 110 11122333445554442 3 579999999999999999999888888888765443
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=2.7e-07 Score=75.25 Aligned_cols=56 Identities=21% Similarity=0.176 Sum_probs=34.0
Q ss_pred CCCeEEEEeCC--------CCCCchHHHHHHHhhc---CCCcEEEEEcCCCCccccCChHHHHHHHHHH
Q 021229 240 TQPTLILWGEH--------DQIFPLELGRRLKSHL---GDNAQLIVIKKAGHAFNYEKPKEFYKHLKSF 297 (315)
Q Consensus 240 ~~P~lvi~G~~--------D~~~~~~~~~~l~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 297 (315)
+.|+++.+|+. |..++....+.+.+.+ +.+.++.++||.+|...+ |..+...|+..
T Consensus 196 ~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~~--~~s~~~~l~~l 262 (265)
T d2gzsa1 196 TKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMF--NASFRQALLDI 262 (265)
T ss_dssp TCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHH--HHHHHHHHHHH
T ss_pred CCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcchHH--HHHHHHHHHHH
Confidence 34566666655 6666777677676544 246899999999996532 44555555443
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=98.55 E-value=2.3e-07 Score=77.65 Aligned_cols=47 Identities=21% Similarity=0.285 Sum_probs=37.8
Q ss_pred CCCCeEEEEeCCCCCCchHHHHHHHhhcC-----CCcEEEEEcCCCCccccC
Q 021229 239 ITQPTLILWGEHDQIFPLELGRRLKSHLG-----DNAQLIVIKKAGHAFNYE 285 (315)
Q Consensus 239 i~~P~lvi~G~~D~~~~~~~~~~l~~~~~-----~~~~~~~i~~~gH~~~~e 285 (315)
.+.|+++++|++|+.||+..++.+.+.+. .+.+++..+++||.+.-+
T Consensus 89 ~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 89 GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEES
T ss_pred CCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCC
Confidence 45799999999999999999888887662 135678889999977543
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.54 E-value=6.2e-08 Score=83.03 Aligned_cols=94 Identities=14% Similarity=0.174 Sum_probs=63.6
Q ss_pred CCcEEEEccCCC-Ch-----hhhHHh----hHhhcc-ccceEEeecCCCCCCCCCCCCCCCchhHHHHHHHHHHHc----
Q 021229 49 KPDLVLIHGLGA-NA-----LWQWTN----IIPHMI-HYFNVYVPDLLFFGDSFTTRPERSESFQAECVMRVMEAH---- 113 (315)
Q Consensus 49 ~~~vvllHG~~~-~~-----~~~w~~----~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~a~~~~~~l~~l---- 113 (315)
+-||||+||+.+ .. ...|.. +.+.|. .+++|++...+.. .+...-+.++...++..
T Consensus 7 ~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p~---------~S~~~RA~eL~~~I~~~~~d~ 77 (388)
T d1ku0a_ 7 DAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL---------SSNWDRACEAYAQLVGGTVDY 77 (388)
T ss_dssp CCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCSS---------BCHHHHHHHHHHHHHCEEEEC
T ss_pred CCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCCc---------cCHHHHHHHHHHHHhhhhhhh
Confidence 458999999643 11 114653 555564 4599999988532 33334466666666532
Q ss_pred C-------------------------CCceEEEEEchhHHHHHHHHHhhhh-------------------------hhce
Q 021229 114 S-------------------------VKKLSLVGLSYGGFVGYSMAAQFKE-------------------------KIEK 143 (315)
Q Consensus 114 ~-------------------------~~~v~lvGhSmGG~ia~~~a~~~p~-------------------------~v~~ 143 (315)
| .+||+||||||||..+=.++...|+ .|++
T Consensus 78 G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~V~S 157 (388)
T d1ku0a_ 78 GAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNVSLSPLFEGGHRFVLS 157 (388)
T ss_dssp CHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCCCCEEE
T ss_pred hHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhccccccccccccccccccccccccCCcceEE
Confidence 1 1489999999999999888887765 4888
Q ss_pred eEEeeCCC
Q 021229 144 VVICCSGV 151 (315)
Q Consensus 144 lil~~~~~ 151 (315)
++-++++-
T Consensus 158 vTTIsTPH 165 (388)
T d1ku0a_ 158 VTTIATPH 165 (388)
T ss_dssp EEEESCCT
T ss_pred EEeccCCC
Confidence 88887643
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=98.53 E-value=5.7e-07 Score=73.46 Aligned_cols=38 Identities=11% Similarity=0.174 Sum_probs=33.3
Q ss_pred CCCceEEEEEchhHHHHHHHHHhhhhhhceeEEeeCCC
Q 021229 114 SVKKLSLVGLSYGGFVGYSMAAQFKEKIEKVVICCSGV 151 (315)
Q Consensus 114 ~~~~v~lvGhSmGG~ia~~~a~~~p~~v~~lil~~~~~ 151 (315)
+.+++.+.|+||||..++.+|.++|+.+.+++.+++..
T Consensus 142 d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~ 179 (273)
T d1wb4a1 142 SRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDY 179 (273)
T ss_dssp TGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCC
T ss_pred CccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCccc
Confidence 44679999999999999999999999999998876543
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.34 E-value=6.7e-05 Score=66.33 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=51.6
Q ss_pred CCCeEEEEeCCCCCCchHHHHHHHhhcC------------------------------------CCcEEEEEcCCCCccc
Q 021229 240 TQPTLILWGEHDQIFPLELGRRLKSHLG------------------------------------DNAQLIVIKKAGHAFN 283 (315)
Q Consensus 240 ~~P~lvi~G~~D~~~~~~~~~~l~~~~~------------------------------------~~~~~~~i~~~gH~~~ 283 (315)
.+++|+..|..|-+||.-..+.+.+.+. .+.+++.+.+|||+++
T Consensus 372 girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmvP 451 (483)
T d1ac5a_ 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccCc
Confidence 4799999999999999877666654431 1357889999999999
Q ss_pred cCChHHHHHHHHHHHhcC
Q 021229 284 YEKPKEFYKHLKSFLLDS 301 (315)
Q Consensus 284 ~e~p~~~~~~i~~fl~~~ 301 (315)
.++|+.-.+.|..||.+.
T Consensus 452 ~dqP~~a~~mi~~fl~~~ 469 (483)
T d1ac5a_ 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHhCCc
Confidence 999999999999999754
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=97.44 E-value=0.00019 Score=63.32 Aligned_cols=117 Identities=16% Similarity=0.068 Sum_probs=68.3
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCC---ChhhhHHhhHhhcc-ccceEEeecCC----CCCCCCCC----CCCCCchhH
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGA---NALWQWTNIIPHMI-HYFNVYVPDLL----FFGDSFTT----RPERSESFQ 102 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~---~~~~~w~~~~~~l~-~~~~vi~~D~~----G~G~S~~~----~~~~~~~~~ 102 (315)
..+++|.+...+.+.|.+|+|||.+. +....+......+. +..=||.+.+| |+=..... ..+.-..++
T Consensus 82 L~lni~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~~~~~~~~~~gN~Gl~Dq 161 (483)
T d1qe3a_ 82 LYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQ 161 (483)
T ss_dssp CEEEEEEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTCTTSCSCHHHHHH
T ss_pred CEEEEEECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhccccccccccccccccHHH
Confidence 47888987544445688899998642 22111222222222 24778899999 44211111 112112222
Q ss_pred ---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 103 ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 103 ---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
.++|.+-++.+| .++|.|+|||-||..+..++... ...+.++|+.++..
T Consensus 162 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 162 AAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 234444455565 36799999999999887776543 23688999887654
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=97.33 E-value=0.00034 Score=62.36 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=67.7
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCC---ChhhhHHhhHh-hccccceEEeecCC----CCCCCCC---CCCCCCchhH-
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGA---NALWQWTNIIP-HMIHYFNVYVPDLL----FFGDSFT---TRPERSESFQ- 102 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~---~~~~~w~~~~~-~l~~~~~vi~~D~~----G~G~S~~---~~~~~~~~~~- 102 (315)
..++.|.+.....+.|.+|+|||.+. +....+..... ...+..=||.+.+| ||-.+.. ...+.-..++
T Consensus 92 L~LnI~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~GFl~~~~~~~~~gN~Gl~Dq~ 171 (532)
T d1ea5a_ 92 LYLNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGLLDQR 171 (532)
T ss_dssp CEEEEEECSSCCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCTTCSSSCSCHHHHHHH
T ss_pred CEEEEEeCCCCCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccccccccccccCCCCcccchhHH
Confidence 57888986444445688899998542 11111222111 22345778888888 3322211 1112222222
Q ss_pred --HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 103 --AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 103 --a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
.++|.+-++.+| .++|.|+|+|-||..+..+.... ...+.++|+.++..
T Consensus 172 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 172 MALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 234445555666 36899999999998877766542 23688899887544
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00051 Score=61.06 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=66.9
Q ss_pred ceEEEEEecCCCCCCCcEEEEccCCC----ChhhhHHhhHhhccccceEEeecCC----CCCCC-CC-C-CCCCCchhH-
Q 021229 35 SVMHCWVPKTRNDSKPDLVLIHGLGA----NALWQWTNIIPHMIHYFNVYVPDLL----FFGDS-FT-T-RPERSESFQ- 102 (315)
Q Consensus 35 ~~~~~~~~~~~~~~~~~vvllHG~~~----~~~~~w~~~~~~l~~~~~vi~~D~~----G~G~S-~~-~-~~~~~~~~~- 102 (315)
..++.|.+.....+.|.+|+|||.+. +....+....-......-||.+.+| |+-.+ .. . ..+.-..++
T Consensus 90 L~lnI~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~ 169 (526)
T d1p0ia_ 90 LYLNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGLFDQQ 169 (526)
T ss_dssp CEEEEEEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCTTSCSCHHHHHHH
T ss_pred CEEEEEeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccccccCCCCcccccccccccchh
Confidence 57889987644455688899998542 2211122211111234778888988 33221 11 1 112222222
Q ss_pred --HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHh--hhhhhceeEEeeCCC
Q 021229 103 --AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQ--FKEKIEKVVICCSGV 151 (315)
Q Consensus 103 --a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~--~p~~v~~lil~~~~~ 151 (315)
.++|.+-|+.+| .++|.|+|+|-||..+..+... ....+.++|+.++..
T Consensus 170 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 170 LALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred hhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 234445555566 3689999999999987665543 234678888876543
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.20 E-value=0.00094 Score=59.52 Aligned_cols=117 Identities=15% Similarity=0.064 Sum_probs=67.1
Q ss_pred ceEEEEEecCC-CCCCCcEEEEccCCC---ChhhhH-HhhHhhccccceEEeecCC----CCCCCCC---CCCCCCchhH
Q 021229 35 SVMHCWVPKTR-NDSKPDLVLIHGLGA---NALWQW-TNIIPHMIHYFNVYVPDLL----FFGDSFT---TRPERSESFQ 102 (315)
Q Consensus 35 ~~~~~~~~~~~-~~~~~~vvllHG~~~---~~~~~w-~~~~~~l~~~~~vi~~D~~----G~G~S~~---~~~~~~~~~~ 102 (315)
..++.|.+... ..+.|.+|+|||.+. ++...+ ....-...+..-||.+.+| |+=.+.. ...+.-..++
T Consensus 97 L~LnI~~P~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq 176 (542)
T d2ha2a1 97 LYLNVWTPYPRPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGLLDQ 176 (542)
T ss_dssp CEEEEEEESSCCSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCTTCSSCCSCHHHHHH
T ss_pred CEEEEEecCCCCCCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeeecccccccCCCcCCcccH
Confidence 57888886432 234578899998642 221112 2211111245778899999 4422211 1112112222
Q ss_pred ---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhhh--hhhceeEEeeCCC
Q 021229 103 ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQFK--EKIEKVVICCSGV 151 (315)
Q Consensus 103 ---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~p--~~v~~lil~~~~~ 151 (315)
.++|.+-|..+| .++|.|+|+|-||..+..+..... ..+.++|+.++..
T Consensus 177 ~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 177 RLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 234445555666 367999999999998887766543 3688888886543
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0012 Score=58.60 Aligned_cols=119 Identities=16% Similarity=0.115 Sum_probs=67.3
Q ss_pred CCceEEEEEecC--CCCCCCcEEEEccCCCC--hhhhHHhhHhhccccceEEeecCC----CCCCCCCC--CCCCCchhH
Q 021229 33 DGSVMHCWVPKT--RNDSKPDLVLIHGLGAN--ALWQWTNIIPHMIHYFNVYVPDLL----FFGDSFTT--RPERSESFQ 102 (315)
Q Consensus 33 ~g~~~~~~~~~~--~~~~~~~vvllHG~~~~--~~~~w~~~~~~l~~~~~vi~~D~~----G~G~S~~~--~~~~~~~~~ 102 (315)
|=..++.|.+.. .+.+.|.+|+|||.+.. +...+....-...+..=||.+.+| ||-.+... ..+.-..++
T Consensus 95 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~gN~Gl~Dq 174 (532)
T d2h7ca1 95 DCLYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQ 174 (532)
T ss_dssp CCCEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCCCHHHHHH
T ss_pred cCCEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCchhhhhcCceEEEEEeeccCCCccccccccccccccccHHH
Confidence 345788898632 22335788999986432 111232221122344778889998 33222211 112222222
Q ss_pred ---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCCC
Q 021229 103 ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSGV 151 (315)
Q Consensus 103 ---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~~ 151 (315)
.++|.+-|..+| .++|.|+|+|-||..+..+.... ...+.++|+.++..
T Consensus 175 ~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 175 VAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 234444445566 36899999999998887776643 23578888887543
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.44 E-value=0.003 Score=50.50 Aligned_cols=34 Identities=24% Similarity=0.192 Sum_probs=25.5
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFKE 139 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p~ 139 (315)
+.++++.....++++.|||+||++|..++.....
T Consensus 115 i~~~~~~~~~~~i~vTGHSLGGAlA~L~a~~l~~ 148 (261)
T d1uwca_ 115 VKQQASQYPDYALTVTGHSLGASMAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHT
T ss_pred HHHHHhhCCCcceEEeccchhHHHHHHHHHHHHh
Confidence 3344444456689999999999999998876544
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=96.40 E-value=0.0032 Score=55.98 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=64.8
Q ss_pred ceEEEEEecCC--CCCCCcEEEEccCCCCh--hhhH--HhhH-hhc--cccceEEeecCC----CCCCCCC----CCCCC
Q 021229 35 SVMHCWVPKTR--NDSKPDLVLIHGLGANA--LWQW--TNII-PHM--IHYFNVYVPDLL----FFGDSFT----TRPER 97 (315)
Q Consensus 35 ~~~~~~~~~~~--~~~~~~vvllHG~~~~~--~~~w--~~~~-~~l--~~~~~vi~~D~~----G~G~S~~----~~~~~ 97 (315)
..++.|.+... +.+.|.+|+|||.+... ...+ ..+. ..+ .+..=||.+.+| |+-.+.. ...+.
T Consensus 106 L~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~~~~~~~gN~ 185 (544)
T d1thga_ 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNA 185 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCTTH
T ss_pred CEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCchhhccccccH
Confidence 57889986422 23457889999965321 1111 1111 122 244778889998 3322211 01122
Q ss_pred CchhH---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--------hhhhceeEEeeCC
Q 021229 98 SESFQ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--------KEKIEKVVICCSG 150 (315)
Q Consensus 98 ~~~~~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--------p~~v~~lil~~~~ 150 (315)
-..++ -++|.+-++++| .++|.|+|||-||..+..+.... ...+.++|+.++.
T Consensus 186 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 186 GLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 22222 233444445555 36899999999997766555422 1368899988754
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=96.37 E-value=0.0037 Score=55.21 Aligned_cols=118 Identities=16% Similarity=0.065 Sum_probs=64.3
Q ss_pred CceEEEEEecCC--CCCCCcEEEEccCCC----ChhhhHHhhHhhccccceEEeecCC----CCCCCCC----CCCCCCc
Q 021229 34 GSVMHCWVPKTR--NDSKPDLVLIHGLGA----NALWQWTNIIPHMIHYFNVYVPDLL----FFGDSFT----TRPERSE 99 (315)
Q Consensus 34 g~~~~~~~~~~~--~~~~~~vvllHG~~~----~~~~~w~~~~~~l~~~~~vi~~D~~----G~G~S~~----~~~~~~~ 99 (315)
=..++.|.+... +.+.|.+|+|||.+. ...+..........+..=||.+.+| ||=.+.. ...+.-.
T Consensus 80 CL~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~GFl~~~~~~~~~~~N~Gl 159 (517)
T d1ukca_ 80 CLFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAGL 159 (517)
T ss_dssp CCEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSSCTTHHH
T ss_pred CCEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccceeecCccccccccccchhH
Confidence 357888986432 223478899999542 2111111222112233667888998 3322211 0112112
Q ss_pred hhH---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh-h---hhhceeEEeeCCC
Q 021229 100 SFQ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF-K---EKIEKVVICCSGV 151 (315)
Q Consensus 100 ~~~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~-p---~~v~~lil~~~~~ 151 (315)
.++ .++|.+-++.+| .++|.|+|||-||..+....... + ..+.++|+.++..
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~ 220 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 220 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeeccccc
Confidence 222 234445555566 36899999999998776554332 2 2688999887543
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.36 E-value=0.0038 Score=55.94 Aligned_cols=116 Identities=18% Similarity=0.141 Sum_probs=63.6
Q ss_pred ceEEEEEecCC---CCCCCcEEEEccCCC---Chh-hhHHh--hH--hhcc--ccceEEeecCC----CCCCCCCC--CC
Q 021229 35 SVMHCWVPKTR---NDSKPDLVLIHGLGA---NAL-WQWTN--II--PHMI--HYFNVYVPDLL----FFGDSFTT--RP 95 (315)
Q Consensus 35 ~~~~~~~~~~~---~~~~~~vvllHG~~~---~~~-~~w~~--~~--~~l~--~~~~vi~~D~~----G~G~S~~~--~~ 95 (315)
..+++|.+... ..+.|.+|+|||.+- ++. ..+.. +. ..++ .+.=||.+.+| ||-.+... ..
T Consensus 81 L~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GFl~~~~~~~~g 160 (579)
T d2bcea_ 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPG 160 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCCC
T ss_pred CEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeecccccccccccccccCCCc
Confidence 57888886321 123578899998542 111 01110 01 1222 23678888998 33222111 12
Q ss_pred CCCchhH---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCC
Q 021229 96 ERSESFQ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSG 150 (315)
Q Consensus 96 ~~~~~~~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~ 150 (315)
+.-..++ .++|.+-|.++| .++|.|+|||-||..+..+.... ...+.++|+.++.
T Consensus 161 N~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs 222 (579)
T d2bcea_ 161 NYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred cchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCC
Confidence 2222222 234445555566 36799999999998877665532 3468899988753
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.34 E-value=0.0026 Score=50.96 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
+.++++.....++++.|||+||.+|..+|...
T Consensus 123 v~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l 154 (265)
T d1lgya_ 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 154 (265)
T ss_dssp HHHHHHHCTTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCceEEEEecccchHHHHHHHHHH
Confidence 34444455567899999999999999988764
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.30 E-value=0.0025 Score=51.06 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.0
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQF 137 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~ 137 (315)
+.++++.....++++.|||+||++|..+|...
T Consensus 122 i~~~~~~~~~~~i~vtGHSLGGAlA~L~a~~l 153 (265)
T d3tgla_ 122 VLDQFKQYPSYKVAVTGHSLGGATVLLCALDL 153 (265)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEEEecccchHHHHHHHHHHH
Confidence 34444555677899999999999999988754
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=96.25 E-value=0.0045 Score=54.86 Aligned_cols=116 Identities=11% Similarity=0.038 Sum_probs=63.9
Q ss_pred CceEEEEEecC--CCCCCCcEEEEccCCC---ChhhhHH--hhHh-h--ccccceEEeecCC----CCCCCC----CCCC
Q 021229 34 GSVMHCWVPKT--RNDSKPDLVLIHGLGA---NALWQWT--NIIP-H--MIHYFNVYVPDLL----FFGDSF----TTRP 95 (315)
Q Consensus 34 g~~~~~~~~~~--~~~~~~~vvllHG~~~---~~~~~w~--~~~~-~--l~~~~~vi~~D~~----G~G~S~----~~~~ 95 (315)
=..++.|.+.. .+.+.|.||+|||.+. ++. .|. .+.. . ..++.=||.+.+| |+=... ....
T Consensus 97 CL~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~-~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~~~~~~g 175 (534)
T d1llfa_ 97 CLTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPT-IFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175 (534)
T ss_dssp CCEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGG-GSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHTCT
T ss_pred CCEEEEEECCCCCCCCCCeEEEEECCCccccCCCC-CCCchhccchhhhccCCeEEEEeecCCCcccccCCccccccccc
Confidence 35788998632 2345678899998652 221 121 1221 1 1345778899998 332211 0011
Q ss_pred CCCchhH---HHHHHHHHHHcC--CCceEEEEEchhHHHHHHHHH-hh----h---hhhceeEEeeCC
Q 021229 96 ERSESFQ---AECVMRVMEAHS--VKKLSLVGLSYGGFVGYSMAA-QF----K---EKIEKVVICCSG 150 (315)
Q Consensus 96 ~~~~~~~---a~~~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~-~~----p---~~v~~lil~~~~ 150 (315)
+.-..++ .++|.+-+..+| .++|.|+|||-||..+..... .. | ..+.++|+.++.
T Consensus 176 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred ccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 1111121 234445555565 468999999999986654433 21 2 248888888754
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.19 E-value=0.0044 Score=49.73 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 106 VMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 106 ~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
+.++++.....++++.|||+||++|..++....
T Consensus 128 v~~~~~~~~~~~i~vtGHSLGGalA~l~a~~l~ 160 (269)
T d1tiba_ 128 VEDAVREHPDYRVVFTGHSLGGALATVAGADLR 160 (269)
T ss_dssp HHHHHHHCTTSEEEEEEETHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcceeeeccchHHHHHHHHHHHHH
Confidence 334444445568999999999999999998653
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.18 E-value=0.0023 Score=51.45 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=24.4
Q ss_pred HHHHHHcCCCceEEEEEchhHHHHHHHHHhhh
Q 021229 107 MRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK 138 (315)
Q Consensus 107 ~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p 138 (315)
.++++.....++++.|||+||++|..++....
T Consensus 128 ~~~~~~~~~~~i~iTGHSLGGAlA~L~a~~l~ 159 (271)
T d1tiaa_ 128 KEVVAQNPNYELVVVGHSLGAAVATLAATDLR 159 (271)
T ss_pred HHHHHhCCCceEEEeccchHHHHHHHHHHHHH
Confidence 33444445568999999999999999888653
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.88 E-value=0.0087 Score=53.40 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=30.2
Q ss_pred HHHHHHHcC--CCceEEEEEchhHHHHHHHHHhh--hhhhceeEEeeCC
Q 021229 106 VMRVMEAHS--VKKLSLVGLSYGGFVGYSMAAQF--KEKIEKVVICCSG 150 (315)
Q Consensus 106 ~~~~l~~l~--~~~v~lvGhSmGG~ia~~~a~~~--p~~v~~lil~~~~ 150 (315)
|.+-|+.+| .++|.|+|||-||..+..+.... ...+.++|+.+..
T Consensus 216 V~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~ 264 (571)
T d1dx4a_ 216 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGT 264 (571)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCC
T ss_pred HHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccc
Confidence 333334455 36899999999998887665542 2357888877643
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=93.09 E-value=0.12 Score=38.89 Aligned_cols=48 Identities=15% Similarity=0.083 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCceEEEEEchhHHHHHHHHHhhh----hhhceeEEeeCC
Q 021229 103 AECVMRVMEAHSVKKLSLVGLSYGGFVGYSMAAQFK----EKIEKVVICCSG 150 (315)
Q Consensus 103 a~~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~~~p----~~v~~lil~~~~ 150 (315)
...+.+..+.....|++|+|+|-|+.|+-..+...+ ++|.+++++..+
T Consensus 83 ~~~i~~~a~~CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP 134 (197)
T d1cexa_ 83 LGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYT 134 (197)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCT
T ss_pred HHHHHHHHhhCCCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCC
Confidence 445555555666789999999999999988887643 468888887543
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=90.65 E-value=0.33 Score=36.61 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=23.5
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
.+.+..++....|++|+|+|-|+.|+-..+.
T Consensus 71 ~i~~~~~~CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 71 AINNFHNSCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHCTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEeeccchHHHHHHHh
Confidence 3444444555679999999999999988764
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=89.70 E-value=0.43 Score=35.92 Aligned_cols=31 Identities=26% Similarity=0.225 Sum_probs=23.4
Q ss_pred HHHHHHHHcCCCceEEEEEchhHHHHHHHHH
Q 021229 105 CVMRVMEAHSVKKLSLVGLSYGGFVGYSMAA 135 (315)
Q Consensus 105 ~~~~~l~~l~~~~v~lvGhSmGG~ia~~~a~ 135 (315)
.+.+..++-...+++|+|+|-|+.|+-.++.
T Consensus 71 ~i~~~~~~CP~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 71 AVNSFNSQCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHSTTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcEEEEeeccccHHHHHHHh
Confidence 3444444556679999999999999987764
|