Citrus Sinensis ID: 021232

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-----
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTHAEA
ccHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEEEcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccc
ccEEEEEEEEHHHHccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccEHHHHHHHHHcccccccccccccccccccccEEEEEccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcEEEEEEccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcHHHcccccccHHccccccccccccccc
MKFFHLVFALCLLRSVSTSHLKYHAIFnfgdslsdtgnflvsgalafpvigklpygetffrhatgrcsdgrLVIDFMAEafrlpylppylalkegqnfkhgVNFAVAGATALRSVIFYKQKigsrlwtndsLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGeiggndynyrAFVGESINQLRASVPLVVKAITNATRLLIEEGAvelvvpgnfpigCSAVYLTLFQSlnemdydrngclkapnaFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMrfyhapghygQLIATLNSTSLIKSLFFTHAEA
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKigsrlwtndsLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTHAEA
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTHAEA
**FFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFT****
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLK**************KKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTH***
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTHAEA
MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFT****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKFFHLVFALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTSLIKSLFFTHAEA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query315 2.2.26 [Sep-21-2011]
Q9FJ45372 GDSL esterase/lipase At5g yes no 0.866 0.733 0.559 2e-84
Q38894384 GDSL esterase/lipase At1g no no 0.917 0.752 0.471 5e-70
Q3E7I6385 GDSL esterase/lipase At1g no no 0.907 0.742 0.468 1e-68
Q9FXJ1389 GDSL esterase/lipase At1g no no 0.923 0.748 0.449 3e-68
P0C8Z7390 GDSL esterase/lipase At1g no no 0.920 0.743 0.462 2e-67
Q94F40393 GDSL esterase/lipase At1g no no 0.876 0.702 0.466 4e-67
Q8RXT9403 GDSL esterase/lipase At1g no no 0.923 0.722 0.447 1e-65
Q9SHP6383 GDSL esterase/lipase At1g no no 0.911 0.749 0.441 9e-65
Q9FXJ2390 GDSL esterase/lipase At1g no no 0.879 0.710 0.455 3e-63
Q9ZQI3394 GDSL esterase/lipase At2g no no 0.926 0.741 0.429 4e-63
>sp|Q9FJ45|GDL83_ARATH GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1 Back     alignment and function desciption
 Score =  313 bits (801), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/277 (55%), Positives = 188/277 (67%), Gaps = 4/277 (1%)

Query: 21  LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEA 80
           LKY +IFNFGDSLSDTGNFL+SG +  P IG+LPYG+TFF  +TGRCSDGRL+IDF+AEA
Sbjct: 26  LKYESIFNFGDSLSDTGNFLLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLIIDFIAEA 85

Query: 81  FRLPYLPPYLA---LKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQID 137
             LPY+PPYL      +  +FK G NFAVAGATA     F  + +   L TN +L +Q+D
Sbjct: 86  SGLPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSFFKNRGLSVTLLTNKTLDIQLD 145

Query: 138 WFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAIT 197
           WFKKLK S+C T+ +CE YF+KSLF VGEIGGNDYNY      S       VP V+  I 
Sbjct: 146 WFKKLKPSLCKTKPECEQYFRKSLFLVGEIGGNDYNYPLLAFRSFKHAMDLVPFVINKIM 205

Query: 198 NATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD-RNGCLKAPNAFARYHNTM 256
           + T  LIEEGA+ L+VPGN PIGCSA  L  F   +   YD RN C    N  A+ HN  
Sbjct: 206 DVTSALIEEGAMTLIVPGNLPIGCSAALLERFNDNSGWLYDSRNQCYMPLNNLAKLHNDK 265

Query: 257 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293
           LK  L  LR+KYP+A IIYADYY +AM+F+++P  YG
Sbjct: 266 LKKGLAALRKKYPYAKIIYADYYSSAMQFFNSPSKYG 302

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q38894|GDL13_ARATH GDSL esterase/lipase At1g28670 OS=Arabidopsis thaliana GN=At1g28670 PE=2 SV=1 Back     alignment and function description
>sp|Q3E7I6|GDL11_ARATH GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana GN=At1g28650 PE=2 SV=1 Back     alignment and function description
>sp|Q9FXJ1|GDL6_ARATH GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1 Back     alignment and function description
>sp|P0C8Z7|GDL91_ARATH GDSL esterase/lipase At1g28640 OS=Arabidopsis thaliana GN=At1g28640 PE=2 SV=1 Back     alignment and function description
>sp|Q94F40|GDL9_ARATH GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXT9|GDL8_ARATH GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2 Back     alignment and function description
>sp|Q9SHP6|GDL10_ARATH GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana GN=At1g28610 PE=2 SV=2 Back     alignment and function description
>sp|Q9FXJ2|GDL7_ARATH GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZQI3|GDL40_ARATH GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana GN=At2g27360 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
224079107378 predicted protein [Populus trichocarpa] 0.917 0.764 0.707 1e-118
224093236378 predicted protein [Populus trichocarpa] 0.885 0.738 0.734 1e-117
147779646 772 hypothetical protein VITISV_042282 [Viti 0.930 0.379 0.683 1e-115
359483512364 PREDICTED: GDSL esterase/lipase At5g4591 0.930 0.804 0.686 1e-114
297740481 1124 unnamed protein product [Vitis vinifera] 0.901 0.252 0.692 1e-112
356555408374 PREDICTED: GDSL esterase/lipase At5g4591 0.876 0.737 0.667 1e-105
363808334375 uncharacterized protein LOC100815771 pre 0.869 0.730 0.669 1e-104
357446933374 GDSL esterase/lipase [Medicago truncatul 0.853 0.719 0.658 3e-99
359485277364 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.914 0.791 0.557 5e-87
357127765373 PREDICTED: GDSL esterase/lipase At5g4591 0.911 0.769 0.541 2e-86
>gi|224079107|ref|XP_002305752.1| predicted protein [Populus trichocarpa] gi|222848716|gb|EEE86263.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/297 (70%), Positives = 241/297 (81%), Gaps = 8/297 (2%)

Query: 6   LVFALCLLRS-----VSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFF 60
           L+ + CL+       VST+ L+Y +IFNFGDSLSDTGNFL+SGA+AFPVI KLPYGETFF
Sbjct: 5   LILSFCLIFGFNVDIVSTTPLQYDSIFNFGDSLSDTGNFLLSGAMAFPVIAKLPYGETFF 64

Query: 61  RHATGRCSDGRLVIDFMAEAFRLPYLPPYLALKEGQNFK-HGVNFAVAGATALRSVIFYK 119
           RHATGRCSDGRLV+DF++EA  LP+LPPYLAL + Q    HGVNFAVAGATAL +  FY 
Sbjct: 65  RHATGRCSDGRLVVDFISEASGLPHLPPYLALGKDQLHSFHGVNFAVAGATALDAKFFYD 124

Query: 120 QKIGSRLWTNDSLSVQIDWFKKLKSSICSTRK--DCETYFKKSLFFVGEIGGNDYNYRAF 177
           Q+IG  +WTNDSLSVQ+ WFK+LKSS+C++++   C+ YFKKSLF VGEIGGNDYNY  F
Sbjct: 125 QRIGKIMWTNDSLSVQLGWFKQLKSSLCTSKQGEKCDNYFKKSLFLVGEIGGNDYNYAYF 184

Query: 178 VGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDY 237
            G SI QLRASVPLVV+A+  AT  LIEEGAVEL+VPGN PIGCSAVYLTLF S N  DY
Sbjct: 185 AGGSIKQLRASVPLVVEALAKATSFLIEEGAVELLVPGNLPIGCSAVYLTLFGSPNRTDY 244

Query: 238 DRNGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQ 294
           DRNGCLKA NAF++YHN  LK  L  LRQKYPHA IIYADYYGAA RFYHAP H+G+
Sbjct: 245 DRNGCLKAYNAFSKYHNNQLKTALQMLRQKYPHARIIYADYYGAAKRFYHAPQHHGK 301

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224093236|ref|XP_002334852.1| predicted protein [Populus trichocarpa] gi|222875217|gb|EEF12348.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147779646|emb|CAN64953.1| hypothetical protein VITISV_042282 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483512|ref|XP_002267222.2| PREDICTED: GDSL esterase/lipase At5g45910-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740481|emb|CBI30663.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356555408|ref|XP_003546024.1| PREDICTED: GDSL esterase/lipase At5g45910-like [Glycine max] Back     alignment and taxonomy information
>gi|363808334|ref|NP_001242505.1| uncharacterized protein LOC100815771 precursor [Glycine max] gi|255635329|gb|ACU18018.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357446933|ref|XP_003593742.1| GDSL esterase/lipase [Medicago truncatula] gi|355482790|gb|AES63993.1| GDSL esterase/lipase [Medicago truncatula] Back     alignment and taxonomy information
>gi|359485277|ref|XP_003633253.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase At5g45910-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357127765|ref|XP_003565548.1| PREDICTED: GDSL esterase/lipase At5g45910-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query315
TAIR|locus:2152385372 AT5G45910 "AT5G45910" [Arabido 0.866 0.733 0.563 5.4e-79
TAIR|locus:2018693384 ARAB-1 "AT1G28670" [Arabidopsi 0.917 0.752 0.471 1.7e-66
TAIR|locus:2018718385 AT1G28650 "AT1G28650" [Arabido 0.904 0.740 0.470 2e-65
TAIR|locus:2018673389 AT1G28570 "AT1G28570" [Arabido 0.914 0.740 0.458 5.2e-65
TAIR|locus:2018753393 AT1G28600 "AT1G28600" [Arabido 0.850 0.681 0.476 9.7e-64
TAIR|locus:2018743403 AT1G28590 "AT1G28590" [Arabido 0.923 0.722 0.447 3.8e-62
TAIR|locus:2018733383 AT1G28610 "AT1G28610" [Arabido 0.911 0.749 0.441 1e-61
TAIR|locus:2018758390 AT1G28580 "AT1G28580" [Arabido 0.917 0.741 0.45 9e-61
TAIR|locus:2028661394 AT1G31550 "AT1G31550" [Arabido 0.920 0.736 0.454 2.4e-60
TAIR|locus:2038628394 AT2G27360 "AT2G27360" [Arabido 0.917 0.733 0.441 2.4e-60
TAIR|locus:2152385 AT5G45910 "AT5G45910" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 156/277 (56%), Positives = 191/277 (68%)

Query:    21 LKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEA 80
             LKY +IFNFGDSLSDTGNFL+SG +  P IG+LPYG+TFF  +TGRCSDGRL+IDF+AEA
Sbjct:    26 LKYESIFNFGDSLSDTGNFLLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLIIDFIAEA 85

Query:    81 FRLPYLPPYL-ALK--EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQID 137
               LPY+PPYL +L+  +  +FK G NFAVAGATA     F  + +   L TN +L +Q+D
Sbjct:    86 SGLPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSFFKNRGLSVTLLTNKTLDIQLD 145

Query:   138 WFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRASVPLVVKAIT 197
             WFKKLK S+C T+ +CE YF+KSLF VGEIGGNDYNY      S       VP V+  I 
Sbjct:   146 WFKKLKPSLCKTKPECEQYFRKSLFLVGEIGGNDYNYPLLAFRSFKHAMDLVPFVINKIM 205

Query:   198 NATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYD-RNGCLKAPNAFARYHNTM 256
             + T  LIEEGA+ L+VPGN PIGCSA  L  F   +   YD RN C    N  A+ HN  
Sbjct:   206 DVTSALIEEGAMTLIVPGNLPIGCSAALLERFNDNSGWLYDSRNQCYMPLNNLAKLHNDK 265

Query:   257 LKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293
             LK  L  LR+KYP+A IIYADYY +AM+F+++P  YG
Sbjct:   266 LKKGLAALRKKYPYAKIIYADYYSSAMQFFNSPSKYG 302
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2018693 ARAB-1 "AT1G28670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018718 AT1G28650 "AT1G28650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018673 AT1G28570 "AT1G28570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018753 AT1G28600 "AT1G28600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018743 AT1G28590 "AT1G28590" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018733 AT1G28610 "AT1G28610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018758 AT1G28580 "AT1G28580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028661 AT1G31550 "AT1G31550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038628 AT2G27360 "AT2G27360" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FJ45GDL83_ARATH3, ., 1, ., 1, ., -0.55950.86660.7338yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.766
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.IV.2814.1
hypothetical protein (348 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 8e-95
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 1e-19
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 2e-16
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 1e-06
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  282 bits (725), Expect = 8e-95
 Identities = 105/272 (38%), Positives = 137/272 (50%), Gaps = 19/272 (6%)

Query: 25  AIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRHATGRCSDGRLVIDFMAEAFRLP 84
           A+F FGDSL DTGN      LA       PYG  F    TGR S+GRL+IDF+AEA  LP
Sbjct: 2   ALFVFGDSLVDTGNNNYLPTLAK--ANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLP 59

Query: 85  YL-PPYLALKEGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLK 143
            L PPYL+     +F  GVNFA  GA  L S           L +  SLSVQ+++FK+ K
Sbjct: 60  LLPPPYLSPNGSSDFLTGVNFASGGAGILDS--------TGFLGSVISLSVQLEYFKEYK 111

Query: 144 SSICST-RKDCETYFKKSLFFVGEIGGNDYNYRAFVGES-INQLRASVPLVVKAITNATR 201
             + +   ++          F+  IG NDY    F   +   ++ A VP +V  I++A +
Sbjct: 112 ERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIK 171

Query: 202 LLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFARYHNTMLKAEL 261
            L + GA + VVPG  P+GC     TLF        D  GCL+  N  AR  N  LK  L
Sbjct: 172 RLYDLGARKFVVPGLGPLGCLPSQRTLFG------GDGGGCLEELNELARLFNAKLKKLL 225

Query: 262 HKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293
            +LR++ P A  +YAD Y A +     P  YG
Sbjct: 226 AELRRELPGAKFVYADIYNALLDLIQNPAKYG 257

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 315
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 99.96
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.82
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 98.59
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 98.56
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 98.43
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 98.32
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 98.22
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 98.17
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 98.06
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 98.04
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 98.03
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 97.99
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 97.96
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 97.87
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 97.86
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 97.82
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 97.77
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 97.74
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 97.73
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 97.57
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 97.14
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 96.81
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 96.69
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 96.43
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 96.4
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 96.27
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 96.24
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 96.12
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 95.83
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 95.55
KOG3670397 consensus Phospholipase [Lipid transport and metab 94.99
COG2755216 TesA Lysophospholipase L1 and related esterases [A 94.5
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 93.01
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 90.02
PF0819436 DIM: DIM protein; InterPro: IPR013172 Drosophila i 84.49
cd04824 320 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthas 81.95
COG3240 370 Phospholipase/lecithinase/hemolysin [Lipid metabol 80.6
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.9e-64  Score=472.29  Aligned_cols=278  Identities=25%  Similarity=0.405  Sum_probs=228.4

Q ss_pred             HHHHHHHhhcCCCCcccEEEEcCCcccccCCCCCcCCCcCCCCCCCCCCCCCCC-CCccccCCCchhHHHhHhhcCC-CC
Q 021232            8 FALCLLRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFR-HATGRCSDGRLVIDFMAEAFRL-PY   85 (315)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~~PyG~~~~~-~~~GRfSnG~~~~d~la~~lgl-~~   85 (315)
                      ++.|+...++... ++++|||||||++|+||++++.+.  ..++.||||++|++ +|+||||||++|+||||+.||+ |.
T Consensus        13 ~~~~~~~~~~~~~-~~~aifvFGDSl~D~GN~~~l~~~--~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~   89 (351)
T PLN03156         13 LAQLLVLVAETCA-KVPAIIVFGDSSVDAGNNNQISTV--AKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPA   89 (351)
T ss_pred             HHHHHHHHhcccC-CCCEEEEecCcCccCCCccccccc--cccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCC
Confidence            3334444443433 799999999999999999876542  12478999999986 6999999999999999999999 78


Q ss_pred             CCcccccc-cCCCCCCCcceeeeeccccccccccccccccccccCCCHHHHHHHHHHHHHHhhc--chhhhHhhhccCeE
Q 021232           86 LPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWTNDSLSVQIDWFKKLKSSICS--TRKDCETYFKKSLF  162 (315)
Q Consensus        86 ~p~yl~~~-~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~--g~~~~~~~~~~sL~  162 (315)
                      +|||+++. .+.++.+|+|||+||+++.+.+..        ....+++..||++|+++++++..  +...+++..+++||
T Consensus        90 ~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~--------~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~  161 (351)
T PLN03156         90 IPAYLDPSYNISDFATGVCFASAGTGYDNATSD--------VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALY  161 (351)
T ss_pred             CCCCcCcccCchhhcccceeecCCccccCCCcc--------ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeE
Confidence            89999764 346789999999999998765320        11246799999999988776553  33344566799999


Q ss_pred             EEeeecccccccccc--cC-cchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCC
Q 021232          163 FVGEIGGNDYNYRAF--VG-ESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDR  239 (315)
Q Consensus       163 ~i~~iG~ND~~~~~~--~~-~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~  239 (315)
                      +| |||+|||...+.  .. ....++.++++.+++.+.+.|++||++|||||+|+|+||+||+|..+....      .+.
T Consensus       162 ~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~------~~~  234 (351)
T PLN03156        162 LI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL------MGG  234 (351)
T ss_pred             EE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC------CCC
Confidence            99 999999985332  11 112246678999999999999999999999999999999999998765311      124


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCCcCchh
Q 021232          240 NGCLKAPNAFARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIATLNSTS  303 (315)
Q Consensus       240 ~~c~~~~n~~~~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t~~~~~  303 (315)
                      .+|.+.+|++++.||++|++++++|++++||++|+++|+|++++++++||++|||++++.+||+
T Consensus       235 ~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg  298 (351)
T PLN03156        235 SECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCA  298 (351)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccC
Confidence            6899999999999999999999999999999999999999999999999999999999999996

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila [] Back     alignment and domain information
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query315
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 4e-29
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  116 bits (290), Expect = 4e-29
 Identities = 43/285 (15%), Positives = 79/285 (27%), Gaps = 37/285 (12%)

Query: 13  LRSVSTSHLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGKLPYGETFFRH-ATGRCSDGR 71
              +      Y  +  FGDSLSD G F      A               +        G 
Sbjct: 6   HHHLEAPS-PYSTLVVFGDSLSDAGQFPDPAGPAGS--TSRFTNRVGPTYQNGSGEIFGP 62

Query: 72  LVIDFMAEAFRLP--YLPPYLALK-EGQNFKHGVNFAVAGATALRSVIFYKQKIGSRLWT 128
                +     +    L    +     Q    G N+AV G    +         GS +  
Sbjct: 63  TAPMLLGNQLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIER 122

Query: 129 NDSLSVQIDWFKKLKSSICSTRKDCETYFKKSLFFVGEIGGNDYNYRAFVGESINQLRAS 188
           +++L    D +   ++               +L+++   GGND+     + +        
Sbjct: 123 DNTLLRSRDGYLVDRARQGL------GADPNALYYIT-GGGNDFLQGRILND------VQ 169

Query: 189 VPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNA 248
                  + ++ + L + GA  +VV     +G +                        + 
Sbjct: 170 AQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATFG------------GPLQPFASQ 217

Query: 249 FARYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYG 293
            +   N  L A+L         AN+I  +           P  +G
Sbjct: 218 LSGTFNAELTAQL-----SQAGANVIPLNIPLLLKEGMANPASFG 257

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.17
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 98.63
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 98.58
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 98.47
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 98.35
1vjg_A218 Putative lipase from the G-D-S-L family; structura 98.25
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 98.03
3bzw_A274 Putative lipase; protein structure initiative II, 98.01
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 97.96
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 97.8
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 97.79
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 97.78
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 97.67
2hsj_A214 Putative platelet activating factor; structr genom 97.52
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 97.45
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 97.39
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 97.28
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 96.89
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 96.89
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 96.74
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 96.72
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 96.53
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 96.24
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 95.6
3lub_A254 Putative creatinine amidohydrolase; structural gen 83.39
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=5.7e-49  Score=395.29  Aligned_cols=248  Identities=17%  Similarity=0.144  Sum_probs=190.6

Q ss_pred             CCcccEEEEcCCcccccCCCCCcCCCcCCCCCC-CCCCCCCCCCCccccC-CCchhHHHhHhhcCCCC--CCcccccc-c
Q 021232           20 HLKYHAIFNFGDSLSDTGNFLVSGALAFPVIGK-LPYGETFFRHATGRCS-DGRLVIDFMAEAFRLPY--LPPYLALK-E   94 (315)
Q Consensus        20 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~p~~~~-~PyG~~~~~~~~GRfS-nG~~~~d~la~~lgl~~--~p~yl~~~-~   94 (315)
                      +.+|++||+||||+|||||.....+...+.... .|+|.+|+   +|||| ||++|+||||+.||+|.  ++||+... .
T Consensus        12 ~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~~~   88 (632)
T 3kvn_X           12 PSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVNA   88 (632)
T ss_dssp             CCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHHHH
T ss_pred             CCCCccEEEEccccccCCCcccccCCcCCccccccCCCCccc---cCcccccCCchHHHHHHHcCCCccccCcccccccc
Confidence            348999999999999999987654411100011 12377776   99999 99999999999999983  66776532 2


Q ss_pred             CCCCCCCcceeeeeccc---cccccccccccccccccCCCHHHHHHHHH-HHHHHhhcchhhhHhhhccCeEEEeeeccc
Q 021232           95 GQNFKHGVNFAVAGATA---LRSVIFYKQKIGSRLWTNDSLSVQIDWFK-KLKSSICSTRKDCETYFKKSLFFVGEIGGN  170 (315)
Q Consensus        95 ~~~~~~G~NfA~gGA~~---~~~~~~~~~~~~~~~~~~~~l~~Qv~~f~-~~~~~~~~g~~~~~~~~~~sL~~i~~iG~N  170 (315)
                      +.++.+|+|||+|||++   ++....   .    ...++++..||.+|. +++.++..   .+.+..+++||+| |||+|
T Consensus        89 ~~~~~~G~NfA~gGa~~~~~l~~~~~---~----~~~~~~l~~ql~~~~~~~l~~~~~---~~~~~~~~sL~~v-~iG~N  157 (632)
T 3kvn_X           89 QQGIADGNNWAVGGYRTDQIYDSITA---A----NGSLIERDNTLLRSRDGYLVDRAR---QGLGADPNALYYI-TGGGN  157 (632)
T ss_dssp             HHTCCCCSBCCCTTCCHHHHHHHHHS---T----TCEEEEETTEEEEEECCHHHHHHT---TTCCCCTTSEEEE-CCSHH
T ss_pred             ccccccCceEeecccccccccccccc---c----cccccccchhHHHHHHHHHHHHhh---ccCccCCCCEEEE-EEech
Confidence            46789999999999997   333211   0    112344555655444 33332221   1234679999999 99999


Q ss_pred             ccccccccCcchhhhhhhHHHHHHHHHHHHHHHHHhCCcEEEEcCCCCcccccchhhhhccCCcCCCCCCCccchhhHHH
Q 021232          171 DYNYRAFVGESINQLRASVPLVVKAITNATRLLIEEGAVELVVPGNFPIGCSAVYLTLFQSLNEMDYDRNGCLKAPNAFA  250 (315)
Q Consensus       171 D~~~~~~~~~~~~~~~~~v~~~v~~i~~~i~~L~~~GAR~fvv~~lpplgc~P~~~~~~~~~~~~~~d~~~c~~~~n~~~  250 (315)
                      ||+..+..+      ..+++.+++++.++|++||++|||+|+|+++||+||+|...            ..+|.+.+|+++
T Consensus       158 D~~~~~~~~------~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~------------~~~c~~~~n~~~  219 (632)
T 3kvn_X          158 DFLQGRILN------DVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF------------GGPLQPFASQLS  219 (632)
T ss_dssp             HHHTTCCCS------HHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT------------TSTTHHHHHHHH
T ss_pred             hhhcccccC------hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc------------CCCchHHHHHHH
Confidence            998765322      24688999999999999999999999999999999999842            147999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCcEEEEEeccHHHHHHHhCcCCCCCccCC--cCchhh
Q 021232          251 RYHNTMLKAELHKLRQKYPHANIIYADYYGAAMRFYHAPGHYGQLIAT--LNSTSL  304 (315)
Q Consensus       251 ~~fN~~L~~~l~~L~~~~~g~~i~~~D~~~~~~~i~~nP~~yGf~~~t--~~~~~~  304 (315)
                      +.||++|+++|++|+     ++|+++|+|.++++|++||++|||++++  .+||+.
T Consensus       220 ~~~N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~  270 (632)
T 3kvn_X          220 GTFNAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFS  270 (632)
T ss_dssp             HHHHHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSS
T ss_pred             HHHHHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCC
Confidence            999999999999995     3799999999999999999999999986  588863
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query315
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 98.58
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 98.3
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 97.94
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 97.8
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 97.8
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 97.34
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 96.79
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 96.4
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 96.38
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 94.7
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 94.07
d1gzga_ 329 5-aminolaevulinate dehydratase, ALAD (porphobilino 80.89
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=98.58  E-value=1.1e-07  Score=83.43  Aligned_cols=35  Identities=6%  Similarity=-0.078  Sum_probs=25.2

Q ss_pred             CchhHHHhHhhcCCCCCCcccccccCCCCCCCcceeeeecccccc
Q 021232           70 GRLVIDFMAEAFRLPYLPPYLALKEGQNFKHGVNFAVAGATALRS  114 (315)
Q Consensus        70 G~~~~d~la~~lgl~~~p~yl~~~~~~~~~~G~NfA~gGA~~~~~  114 (315)
                      +..|+++|++.|+.+...+          ..-.|||.+||++.+.
T Consensus        35 ~~~y~~~la~~l~~~~~~~----------~~~~n~a~sGatt~~~   69 (302)
T d1esca_          35 KENYPAVATRSLADKGITL----------DVQADVSCGGALIHHF   69 (302)
T ss_dssp             TTCHHHHHHHHHHTTTCEE----------EEEEECCCTTCCGGGG
T ss_pred             CcCHHHHHHHHhccccCCc----------eeEEEeeecccchhhh
Confidence            6789999999998653211          1126999999998653
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1gzga_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure