Citrus Sinensis ID: 021360

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
Protein Sequence
MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccccccHHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEccccHHHHHHHHHHcccccccccEEEccccccccccccHHHHHHHHHcccccccEEEEEcccHHHHHHHHcccEEEEEccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEcccEEEccHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcHHHHccEEcccccccccccccHHHHHHHHHccccHHHEEEEEccHHHHHHHHHHccEEEEEccccccHHHHHHHHHHHHcHHHccHHHccccccHHHHccccccccEEEEEEcEccccccHHHHccccEEccHHHHHccccccccEEEEEEEEEcccccEEEEEEEEEccccccccEEEEEcc
Coil and Loop (DISEMBL)
MAQPLKKLMSCVILdldgtllntdgMFSEVLKTFLVKYgkewdgrekhkivgktpLEEAAIIVEdyglpcakhefVNEVYSMFSDHLCKVKALPGANRLIKHLschgvpmalasnshratieskisyqhgwnesFSVIVgsdevrtgkpspdIFLEAAKrlnmepssslviedsvIGVVAGKAAGMevvavpslpkqthrytAADEVINSLLdlrpekwglppfqdwiegtlpsepwyiggpvvkglgrgskvlgiptanlstegysdvlsehpsgvyfgwaglstrGVYKMVMSigwnpyfdnAEKTIVSLT
Flexible Loop (DISEMBL)
MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVkygkewdgrekhkivgktplEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRlnmepssslviEDSVIGVVAGKAAGMEVVAvpslpkqthrytAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGwnpyfdnaeKTIVSLT
Low Complexity Region (SEG)
MAQPLKKLMSCVIldldgtllntdgMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT
Disordered region (IsUnstruct)
*******LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD**********IFL************SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT*****
Disordered Region (DISOPRED)
*****KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTI****
Disordered Region (DISEMBL)
MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT
Disordered Region (DISPRO)
****LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVS**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	313	2.2.26 [Sep-21-2011]
Q08623	228	Pseudouridine-5'-monophos	yes	no	0.683	0.938	0.399	2e-34
Q9D5U5	234	Pseudouridine-5'-monophos	yes	no	0.686	0.918	0.388	2e-32
Q94529	231	Probable pseudouridine-5'	no	no	0.696	0.943	0.373	1e-30
O14165	249	Uncharacterized protein C	yes	no	0.686	0.863	0.284	6e-19
O59760	236	Putative uncharacterized	no	no	0.629	0.834	0.299	2e-16
O76206	153	Putative riboflavin kinas	no	no	0.236	0.483	0.5	2e-16
Q86ZR7	236	Putative uncharacterized	yes	no	0.693	0.919	0.3	8e-16
O33513	227	Protein CbbY OS=Rhodobact	no	no	0.613	0.845	0.283	1e-15
Q8CFV9	155	Riboflavin kinase OS=Mus	no	no	0.249	0.503	0.461	2e-15
Q9X0Y1	216	Phosphorylated carbohydra	yes	no	0.562	0.814	0.301	2e-15

>sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 4/218 (1%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           +I D+DG LL+T+ ++S V +    +Y K++    K  ++GK  LE A II++   LP +
Sbjct: 11  LIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMS 70

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
           K E V E  +   +       +PGA +LI HL  HG+P ALA++S  A+ + K S    +
Sbjct: 71  KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEF 130

Query: 132 NESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGME 187
              FS +++G D EV+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+
Sbjct: 131 FSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQ 190

Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
           VV VP         T A  V+NSL D +PE +GLP ++
Sbjct: 191 VVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: nEC: 6

>sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 4/219 (1%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           +I DLDG +LNT+ ++++V +    +YGK+++   K  ++GK  LE A  IVE   LP +
Sbjct: 16  LIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPIS 75

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
           K E + E        L     +PGA  LI HL  H +P ALA++S   T ++K S   G+
Sbjct: 76  KEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGF 135

Query: 132 NESF-SVIVGSD-EVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGME 187
              F  +++G D EV+ GKP  DIFL  AKR +   +P   LV EDS  GV A    GM+
Sbjct: 136 FGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQ 195

Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
           VV VP           A  V++SL D +PE +GLP F +
Sbjct: 196 VVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: n

EC: 6

>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 12/230 (5%)

Query: 5   LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
           L+K+  CV  D+DG LL+T+ +++   +  L  YGK +    K +++G      A  +VE
Sbjct: 6   LRKVTHCV-FDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64

Query: 65  DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
            Y LP +  E+  +  +     +   + +PGA RL++HL  + VP  LA++S    +E K
Sbjct: 65  HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124

Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
            + QH   E FS+    + GS   EV  GKP+PDIFL AA R  +  +PS  LV EDS  
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181

Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
           GV A  +AGM+VV VP       + + A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231

Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: n

EC: 6

>sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2

 Score = 95.1 bits (235), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 17/232 (7%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEA 59
           MA    K M+C + D+DG L++++ ++++     L +YGK+      K +++G+     A
Sbjct: 1   MAAKHVKYMAC-LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAA 59

Query: 60  AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA 119
            ++++   +P    +FV+E   + +     +K +PGA  LI +LS HG+ + LA++S+ A
Sbjct: 60  KVVIDWSNIPMTPQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGLATSSNTA 119

Query: 120 TIESKISYQHGWNESF--SVIVGSDEVRT---GKPSPDIFLEAAKRLN----------ME 164
               K ++     E F  +VI G +       GKP PDI+L+    +N          + 
Sbjct: 120 NYNMKTAHLKHIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALT 179

Query: 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
           PS  +  EDS+ GV + KAAGM V+ VP    +       +E+++S  +  P
Sbjct: 180 PSQCIAFEDSIPGVKSAKAAGMHVIWVPDAAIKNLVGDQLNEIVDSQCETLP 231

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 30/227 (13%)

Query: 13  ILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           + D+DG L++T+ ++++     L +Y K  +    K K++G+T  E + I ++  G+   
Sbjct: 7   LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLT 66

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
             E++       ++     K LPG   L+  L    +P+ALA++S     E K ++    
Sbjct: 67  CEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126

Query: 132 NESF--SVIVGSDE---VRTGKPSPDIFLEAAKRLN----------MEPSSSLVIEDSVI 176
            + F  ++I G D    V  GKP PDI+  A K +N          + P + LV EDS+ 
Sbjct: 127 FDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSIT 186

Query: 177 GVVAGKAAGMEVVAVPSL---------PKQTHRYTAADEVINSLLDL 214
           GV +G+AAGM+VV VP +         P+Q     AAD+ I  +L L
Sbjct: 187 GVQSGRAAGMKVVWVPDVNILPFFSLSPEQ-----AADKHITKVLSL 228

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea PE=2 SV=1

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 51/74 (68%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P + GG +V+G GRGSK LGIPTAN   E    +    P+G Y+GWA +    V+KMV+S
Sbjct: 6   PLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGPVHKMVLS 65

Query: 296 IGWNPYFDNAEKTI 309
           IGWNP+++N EK++
Sbjct: 66  IGWNPFYNNKEKSV 79

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A PE=1 SV=2

 Score = 84.7 bits (208), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 23/240 (9%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---EWDGREKHKIVGKTPLE 57
           M  P+   +   + D+DG L+NT+ +++E L   L ++GK    WD   K K+ G    E
Sbjct: 1   MTHPVA--VKACLFDMDGLLINTEDIYTETLNETLAEFGKGPLTWD--VKIKLQGLPGPE 56

Query: 58  EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
               ++E Y LP    E+     ++ S      + LPGA  L+K+L    +P+AL ++S+
Sbjct: 57  AGKRVIEHYKLPITLDEYDERNVALQSLKWGTCEFLPGALNLLKYLKLKNIPIALCTSSN 116

Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLN------MEPSS 167
           +     K S+     + F  IV  D+ R     GKP PDI+    K LN      ++P  
Sbjct: 117 KTKFRGKTSHLEEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKELNEKFHTDIKPDE 176

Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS------LPKQTHRYTAADEVINSLLDLRPEKWGL 221
            +V ED + GV + KA G  V+ VP       L           E+++SL  L   K+GL
Sbjct: 177 CIVFEDGIPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSSLEKLEMSKYGL 236

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1

 Score = 84.3 bits (207), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 20/212 (9%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTP--LEEAAIIVED 65
           +  +I D+DGTL  T+ +  +         G +W   +E ++ + +T    E  A   E+
Sbjct: 3   LKALIFDVDGTLAETEEVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHREN 62

Query: 66  YG----------LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
            G          L  AK +   E+ +       +V  LPG   LI      G+ +A+A+ 
Sbjct: 63  LGSGPSDAKIADLHKAKTQRYVEIIAS-----GQVGLLPGVAELIDRAKASGLRLAIATT 117

Query: 116 SHRATIESKI--SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
           + RA +++ I  ++     + F VI   DEV   KP+PD++L A + L + P++ L  ED
Sbjct: 118 TTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFED 177

Query: 174 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
           S  G+ + +AAG+ VV  PS   +   ++AAD
Sbjct: 178 SRAGLASARAAGLRVVLTPSEYTRGDDFSAAD 209

Rhodobacter capsulatus (taxid: 1061)

>sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 56/78 (71%)

Query: 232 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYK 291
           + S P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+K
Sbjct: 1   MRSLPFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSGDVHK 60

Query: 292 MVMSIGWNPYFDNAEKTI 309
           MV+SIGWNPY+ N +K++
Sbjct: 61  MVVSIGWNPYYKNVKKSM 78

Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
           M  VI D+DG L++T+ ++ E  +     YGK +      +I+G    E   I++E   +
Sbjct: 1   MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEI 60

Query: 69  PCAKHEFVNEVYS----MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS-HRATIES 123
             +   F   V+     +FS+ L   K  PG    ++ +    + +ALA+++  R  +E 
Sbjct: 61  KDSLENFKKRVHEEKKRVFSELL---KENPGVREALEFVKSKRIKLALATSTPQREALER 117

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
               +    + F V+V  D+V+ GKP P+I+L   +RLN+ P   +V EDS  GV A K+
Sbjct: 118 --LRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS 175

Query: 184 AGMEVV 189
           AG+E +
Sbjct: 176 AGIERI 181

Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates.

Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
255567401	382	riboflavin kinase/fmn adenylyltransferas	0.987	0.808	0.783	1e-142
356521303	377	PREDICTED: pseudouridine-5'-monophosphat	0.971	0.806	0.769	1e-137
224082356	382	predicted protein [Populus trichocarpa]	0.987	0.808	0.763	1e-136
297804002	380	ATFMN [Arabidopsis lyrata subsp. lyrata]	0.987	0.813	0.747	1e-136
224066785	381	predicted protein [Populus trichocarpa]	0.984	0.808	0.763	1e-136
359495472	388	PREDICTED: pseudouridine-5'-monophosphat	0.984	0.793	0.756	1e-136
359495493	388	PREDICTED: pseudouridine-5'-monophosphat	0.984	0.793	0.75	1e-134
42567011	379	riboflavin kinase [Arabidopsis thaliana]	0.987	0.815	0.741	1e-134
357475891	377	Riboflavin kinase [Medicago truncatula]	0.971	0.806	0.753	1e-133
147846786	891	hypothetical protein VITISV_023071 [Viti	0.996	0.350	0.718	1e-133

>gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis]

 Score =  509 bits (1310), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/309 (78%), Positives = 269/309 (87%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           MA PLKK +SCVILDLDGTLLNTDG+ S++LK FLVKYGK+WDGRE ++IVGKTP E AA
Sbjct: 3   MANPLKKFVSCVILDLDGTLLNTDGIVSDILKVFLVKYGKQWDGREGNRIVGKTPFEAAA 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            IVEDY LPC   EF+ E+  MFSD  CK+K LPGANRLIKH   H VPMALASNS RA 
Sbjct: 63  TIVEDYKLPCPTEEFIAEITPMFSDQWCKIKPLPGANRLIKHFIGHNVPMALASNSPRAN 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IE+KIS   GW ESFS+I+G DEV+ GKPSP+IFLEAA+RLN+EPSS LVIEDS+ GV+ 
Sbjct: 123 IEAKISCHEGWKESFSIIIGGDEVKAGKPSPEIFLEAARRLNIEPSSCLVIEDSLPGVMG 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAAGMEVVAVPS+PKQ+H YTAADEVINSLLDL+PEKWGLP F+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFEDWVEGTLPVEPWHIG 242

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPVVKG GRGSKVLGIPTANLSTEGYS VLS+HPSGVYFGWA LSTRGVYKMVMSIGWNP
Sbjct: 243 GPVVKGFGRGSKVLGIPTANLSTEGYSAVLSQHPSGVYFGWAALSTRGVYKMVMSIGWNP 302

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 303 YFNNVEKTI 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/304 (76%), Positives = 261/304 (85%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           KKL+ CVILDLDGTLLNTDG+   VLK  L KYGKEWDGRE  KI+G TP E AA +V+D
Sbjct: 5   KKLIRCVILDLDGTLLNTDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQD 64

Query: 66  YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
           Y LPC+  EF++E+  +FSD  C +KALPGANRL+KHL  HGVPMALASNS R +IE+KI
Sbjct: 65  YQLPCSAIEFLSEISPLFSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKI 124

Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
           SY  GW  SFSVI+G DEVRTGKPSP+IFLEAA+RLNMEPSS LVIEDS+ GV AGK A 
Sbjct: 125 SYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAE 184

Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
           MEVV VPSLPKQ+H YTAADEVINSLLDLR EKWGLPPF+DW+EGTLP +PWYIGGPVVK
Sbjct: 185 MEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVK 244

Query: 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA 305
           G GRGSKVLGIPTANLSTEGYSD+LSE+P+GVYFGWAGLS RGV+KMVMSIGWNPYF+N 
Sbjct: 245 GFGRGSKVLGIPTANLSTEGYSDLLSEYPAGVYFGWAGLSARGVFKMVMSIGWNPYFNNK 304

Query: 306 EKTI 309
           EK I
Sbjct: 305 EKAI 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/309 (76%), Positives = 265/309 (85%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           +A+PLKK ++ VILDLDGTL++TDG+  +VLK  L+KYGK+WDGRE  KIVGKTPLEEAA
Sbjct: 3   IAKPLKKAVAAVILDLDGTLIHTDGILGDVLKALLLKYGKQWDGREAQKIVGKTPLEEAA 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
           I+V DY LPC+  EFV ++  +  D  C +KALPGANRLIKHLS H VP+ALASNS RA 
Sbjct: 63  IVVGDYELPCSIDEFVTQITPLLYDQFCNIKALPGANRLIKHLSGHNVPLALASNSPRAY 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IESKISYQ GW ESFSVI+  DEVR GKPSP+IFLEAAKRLN+EPS  LVIEDS+ GV  
Sbjct: 123 IESKISYQQGWKESFSVIIAGDEVRAGKPSPEIFLEAAKRLNIEPSRCLVIEDSLPGVTG 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAA MEVVAVPS+PKQTH Y AADEVI+SLLDL+PE WGLPPF DWI+GTLP E W+IG
Sbjct: 183 GKAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDDWIDGTLPLEIWHIG 242

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP
Sbjct: 243 GPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 302

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 303 YFNNTEKTI 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 231/309 (74%), Positives = 264/309 (85%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           M+  LKKL SCV++DLDGTL+NTDG+  ++L+ +L KYGK+WDGRE  KIVG+TPLE A 
Sbjct: 3   MSNSLKKLTSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGQTPLEAAT 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            IVEDYGLPC   EF +E Y +FS  + K+K+LPGANRLI+HL CHGVP+ALASNS RA 
Sbjct: 63  TIVEDYGLPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IESKIS+  GW E FSVIVGSDEV  GKPSPDIFLEAAKRLN +P+  LVIEDSV GV+A
Sbjct: 123 IESKISHHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLNKDPADCLVIEDSVPGVMA 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAAG  V+AVPSLPKQTH YT+ADEVINSLLD+RPEKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQDWIENTLPIDPWHIG 242

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 303 YFNNKEKTI 311

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/309 (76%), Positives = 269/309 (87%), Gaps = 1/309 (0%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           +A+PLKKL+S VILDLDGTLL+TDG+ S+VLK F+VKYGK+WDGRE  KIVGKTPLE AA
Sbjct: 3   IAKPLKKLVSAVILDLDGTLLHTDGIVSDVLKVFVVKYGKQWDGRETQKIVGKTPLEAAA 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            +VEDY LPC+  +F+ ++  +  D  C +KALPGANRLIKHLS H VPMALASNS RA 
Sbjct: 63  AVVEDYELPCSTDDFLTQITPLLYDQWCSIKALPGANRLIKHLSSHNVPMALASNSPRAN 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IESKISY  GW  SFSVI+  DEVRTGKPSP+IFLEAAKRLN++PSS LVIEDS+ GV  
Sbjct: 123 IESKISYHQGWKGSFSVIIAGDEVRTGKPSPEIFLEAAKRLNVKPSSCLVIEDSLPGVTG 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAAGMEVVAVPS+PK +H YT ADEVINSLLDL+PE WGLPPF+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPK-SHLYTEADEVINSLLDLQPELWGLPPFEDWMEGTLPIEPWHIG 241

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPVVKG GRGSKVLGIPTANLST+GYS +LSEHPSGVYFGWAGLS++G+YKMVMSIGWNP
Sbjct: 242 GPVVKGFGRGSKVLGIPTANLSTKGYSALLSEHPSGVYFGWAGLSSQGLYKMVMSIGWNP 301

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 302 YFNNTEKTI 310

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/308 (75%), Positives = 268/308 (87%)

Query: 2   AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
           A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+
Sbjct: 4   AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63

Query: 62  IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
           IVEDYGLPC   E ++E+  MFS+  C +KALPGANRLIKHL  H VPMALASNS RA+I
Sbjct: 64  IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHRVPMALASNSPRASI 123

Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
           ESKIS   GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 183

Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
           KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE+WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQDWVEDTLPVEPWYIGG 243

Query: 242 PVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPY 301
           PV+KG GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS +GVYKMVMSIGWNPY
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303

Query: 302 FDNAEKTI 309
           F+N EKTI
Sbjct: 304 FNNTEKTI 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/308 (75%), Positives = 266/308 (86%)

Query: 2   AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
           A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+
Sbjct: 4   AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63

Query: 62  IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
           IVEDYGLPC   E ++E+  MFS+  C +KALPGANRLIKHL  HGVP+ALASNS RA+I
Sbjct: 64  IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 123

Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
           ESKIS   GW ESFSVI+G DEVR GKPSP+IF EA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFFEASKRLSVKPSNCLVIEDSLPGVMAG 183

Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
           KAAGMEVVAVPS+P Q+H + +ADEVINSLLDLRPE WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGG 243

Query: 242 PVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPY 301
           PV+KG GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS +GVYKMVMSIGWNPY
Sbjct: 244 PVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPY 303

Query: 302 FDNAEKTI 309
           F+N EKTI
Sbjct: 304 FNNTEKTI 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567011|ref|NP_193878.2| riboflavin kinase [Arabidopsis thaliana] gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana] gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana] gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana] gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 229/309 (74%), Positives = 262/309 (84%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           M+  LKKL SCV++DLDGTL+NTDG+  ++L+ +L KYGK+WDGRE  KIVGKTP+E A 
Sbjct: 3   MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            IVEDY LPC   EF +E Y +FS  + K+K+LPGANRLI+HL CHGVP+ALASNS RA 
Sbjct: 63  TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IESKISY  GW E FSVIVGSDEV  GKPSPDIFLEAAKRL  +P+  LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 303 YFNNKEKTI 311

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475891|ref|XP_003608231.1| Riboflavin kinase [Medicago truncatula] gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula] gi|355509286|gb|AES90428.1| Riboflavin kinase [Medicago truncatula] gi|388509552|gb|AFK42842.1| unknown [Medicago truncatula]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/304 (75%), Positives = 262/304 (86%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           ++L+ CVILDLDGTLLNTDG+   VLK  L KYGKEWDGRE  KIVGKTPLE A+ +VED
Sbjct: 5   RRLIKCVILDLDGTLLNTDGIVCNVLKVSLGKYGKEWDGRETLKIVGKTPLEAASAVVED 64

Query: 66  YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
           YGLPC+  EFV+E+   FSD  C +KALPGANRLIKHL  +GVPMALASNS R +I++KI
Sbjct: 65  YGLPCSPIEFVSELSPQFSDQWCNIKALPGANRLIKHLKSNGVPMALASNSPRESIDAKI 124

Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
           S+  GW +SFSVI+G DEVRTGKPSPDIF EAA+RL +EPSS LVIEDS+ GV AGKAA 
Sbjct: 125 SFHDGWKDSFSVIIGGDEVRTGKPSPDIFFEAARRLKIEPSSCLVIEDSLPGVTAGKAAE 184

Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
           MEVVAVPSLPKQ+H +TAADEVINSLLDL+ EKWGLPPF DW+E TLP +PWYIGGPV+K
Sbjct: 185 MEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGGPVIK 244

Query: 246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA 305
           G GRGSKVLGIPTANLST+ YSD+L+EHP+GVYFGWAGLS RG++KMVMSIGWNPYF+N 
Sbjct: 245 GFGRGSKVLGIPTANLSTKDYSDLLAEHPAGVYFGWAGLSGRGIFKMVMSIGWNPYFNNK 304

Query: 306 EKTI 309
           EKTI
Sbjct: 305 EKTI 308

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147846786|emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 235/327 (71%), Positives = 270/327 (82%), Gaps = 15/327 (4%)

Query: 2   AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
           A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+  HK++GKTP E AA+
Sbjct: 484 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 543

Query: 62  IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
           IVEDYGLPC   E ++E+  MFS+  C +KALPGANRLIKHL  HGVP+ALASNS RA+I
Sbjct: 544 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 603

Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
           ESKIS   GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 604 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 663

Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDW-------------- 227
           KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE WGLP FQD               
Sbjct: 664 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEXWGLPSFQDCKPLRYFLSYSQTFP 723

Query: 228 -IEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST 286
            +E TLP EPWYIGGPV+KG GRGSKVLG+PTANLSTEGYS +LSE  SGVYFGWAGLS 
Sbjct: 724 RVEDTLPVEPWYIGGPVIKGFGRGSKVLGVPTANLSTEGYSTLLSEQSSGVYFGWAGLSK 783

Query: 287 RGVYKMVMSIGWNPYFDNAEKTIVSLT 313
           +GVYKMVMSIGWNPYF+N EKTIVS T
Sbjct: 784 QGVYKMVMSIGWNPYFNNTEKTIVSAT 810

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	313
TAIR|locus:2119647	379	FMN/FHY "riboflavin kinase/FMN	0.987	0.815	0.708	1.6e-118
TAIR|locus:2174567	240	GS1 [Arabidopsis thaliana (tax	0.629	0.820	0.395	1.3e-31
UNIPROTKB|E2R8L4	233	HDHD1 "Uncharacterized protein	0.635	0.854	0.384	2.3e-30
TAIR|locus:2117512	298	GPP1 "glycerol-3-phosphatase 1	0.629	0.661	0.376	3e-30
UNIPROTKB|Q08623	228	HDHD1 "Pseudouridine-5'-monoph	0.638	0.877	0.392	7.9e-30
UNIPROTKB|Q2KJ86	231	HDHD1A "Haloacid dehalogenase-	0.635	0.861	0.369	1.7e-27
MGI|MGI:1914615	234	Hdhd1a "haloacid dehalogenase-	0.642	0.858	0.375	1.7e-27
FB|FBgn0019982	231	Gs1l "GS1-like" [Drosophila me	0.693	0.939	0.354	1.2e-26
UNIPROTKB|E1BRK1	214	HDHD1 "Uncharacterized protein	0.635	0.929	0.344	3.2e-26
RGD|1305101	234	Hdhd1 "haloacid dehalogenase-l	0.642	0.858	0.356	4e-26

TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
 Identities = 219/309 (70%), Positives = 250/309 (80%)

Query:     1 MAQPLKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
             M+  LKKL SCV+            +  ++L+ +L KYGK+WDGRE  KIVGKTP+E A 
Sbjct:     3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62

Query:    61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
              IVEDY LPC   EF +E Y +FS  + K+K+LPGANRLI+HL CHGVP+ALASNS RA 
Sbjct:    63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122

Query:   121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
             IESKISY  GW E FSVIVGSDEV  GKPSPDIFLEAAKRL  +P+  LVIEDSV GV+A
Sbjct:   123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182

Query:   181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
             GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct:   183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242

Query:   241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
             GPV+KG GRGSKVLGIPTANLST+ Y+D L EHPSGVYFGWAGL+ RGV+KMVMSIGWNP
Sbjct:   243 GPVIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKRGVFKMVMSIGWNP 302

Query:   301 YFDNAEKTI 309
             YF+N EKTI
Sbjct:   303 YFNNKEKTI 311

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008531 "riboflavin kinase activity" evidence=IEA;ISS;IDA

GO:0009231 "riboflavin biosynthetic process" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0003919 "FMN adenylyltransferase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2174567 GS1 [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 83/210 (39%), Positives = 122/210 (58%)

Query:    27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
             ++EV +  L ++ K++D   K K++G+  +E A I VE+ G+    +  +F+ E  SM  
Sbjct:    32 YTEVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSAEDFLVERESMLQ 91

Query:    85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
             D     + +PGA+RLIKHL    +P+ +A+ +H    + K + +H   E FS    V+ G
Sbjct:    92 DLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLK-TQRH--RELFSLMHHVVRG 148

Query:   141 SD-EVRTGKPSPDIFLEAAKRLNMEPSSS---LVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
              D EV+ GKP+PD FL AA+R    P  S   LV ED+  GV+A K AGM VV VP    
Sbjct:   149 DDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAAKNAGMNVVMVPDPRL 208

Query:   197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
                    AD++I SL+D +PE+WGLPPF+D
Sbjct:   209 DISHQDVADQIITSLVDFKPEEWGLPPFED 238

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

UNIPROTKB|E2R8L4 HDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 78/203 (38%), Positives = 113/203 (55%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             ++S V +    +YGK++    K  ++GK   E A I+++   LP +K E V+E      +
Sbjct:    30 LYSVVFQEICDRYGKKYSWDVKSLVMGKKATEAAQIVIDVLQLPMSKEELVDESQMKLKE 89

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
                    +PG  +LI HL  HGVP+A+A++S   + E K S    +   F  +++G D E
Sbjct:    90 LFPTAALMPGVEKLIHHLREHGVPLAVATSSSLLSFEMKTSRHKEFFSLFDHIVLGDDPE 149

Query:   144 VRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             V+ GKP PDIFL  AKR +  P     LV ED+  GV A  AAGM+VV VP    Q H  
Sbjct:   150 VKNGKPDPDIFLACAKRFSPPPPMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLQRHLT 209

Query:   202 TAADEVINSLLDLRPEKWGLPPF 224
             + A  V++SL D +PE +GLPP+
Sbjct:   210 SKATVVLDSLQDFQPELFGLPPY 232

GO:0016787 "hydrolase activity" evidence=IEA

TAIR|locus:2117512 GPP1 "glycerol-3-phosphatase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 79/210 (37%), Positives = 120/210 (57%)

Query:    27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
             ++EV +  L +Y K +D   K K++G+  +E A + V++ G+    +  +F+ E  SM  
Sbjct:    89 YTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGISDSLSAEDFIVERESMLQ 148

Query:    85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
             D       +PGA+RL++HL   G+P+ +A+ +H    + K + +H   E FS    V+ G
Sbjct:   149 DLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLK-TQRH--RELFSLMHHVVRG 205

Query:   141 SD-EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
              D EV+ GKP+PD FL A++R     ++P   LV ED+  GV A K AGM V+ VP    
Sbjct:   206 DDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAAKNAGMNVIMVPDSRL 265

Query:   197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
                    AD+V+ SLLD +PE+WGLP FQD
Sbjct:   266 DKSYCNVADQVLASLLDFKPEEWGLPSFQD 295

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA;ISS

UNIPROTKB|Q08623 HDHD1 "Pseudouridine-5'-monophosphatase" [Homo sapiens (taxid:9606)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 80/204 (39%), Positives = 114/204 (55%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             ++S V +    +Y K++    K  ++GK  LE A II++   LP +K E V E  +   +
Sbjct:    25 LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 84

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
                    +PGA +LI HL  HG+P ALA++S  A+ + K S    +   FS +++G D E
Sbjct:    85 VFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPE 144

Query:   144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             V+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+VV VP         
Sbjct:   145 VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLT 204

Query:   202 TAADEVINSLLDLRPEKWGLPPFQ 225
             T A  V+NSL D +PE +GLP ++
Sbjct:   205 TKATLVLNSLQDFQPELFGLPSYE 228

GO:0009117 "nucleotide metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q2KJ86 HDHD1A "Haloacid dehalogenase-like hydrolase domain containing 1A" [Bos taurus (taxid:9913)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 75/203 (36%), Positives = 113/203 (55%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             ++S V +    +YGK++    K  ++GK  LE A +I +   LP +  E V    +   +
Sbjct:    28 LYSAVFEDICGRYGKKYSWDVKSLVMGKKALEAAQLIRDTLQLPMSAEELVEVSQAKLKE 87

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
                    +PG  +LI+HL  H VP A+A++S  A+ + K S +Q  +     V++G D E
Sbjct:    88 VFPTAALMPGVEKLIRHLRKHDVPCAVATSSGTASFQLKTSRHQDFFGLFHHVVLGDDPE 147

Query:   144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             VR+GKP PDIFL  A+R +  P ++  LV ED+  GV A  AAGM+VV VP    +    
Sbjct:   148 VRSGKPEPDIFLTCARRFSPAPPANKCLVFEDAPNGVEAALAAGMQVVMVPDGNLKPDLT 207

Query:   202 TAADEVINSLLDLRPEKWGLPPF 224
             + A  V+ SL D +PE +GLPP+
Sbjct:   208 SKATLVLGSLQDFQPELFGLPPY 230

GO:0016787 "hydrolase activity" evidence=IEA

MGI|MGI:1914615 Hdhd1a "haloacid dehalogenase-like hydrolase domain containing 1A" [Mus musculus (taxid:10090)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 77/205 (37%), Positives = 109/205 (53%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             ++++V +    +YGK+++   K  ++GK  LE A  IVE   LP +K E + E       
Sbjct:    30 LYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPISKEELLKESQEKLQM 89

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
              L     +PGA  LI HL  H +P ALA++S   T ++K S   G+   F  +++G D E
Sbjct:    90 VLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPE 149

Query:   144 VRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             V+ GKP  DIFL  AKR +   +P   LV EDS  GV A    GM+VV VP         
Sbjct:   150 VKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLT 209

Query:   202 TAADEVINSLLDLRPEKWGLPPFQD 226
               A  V++SL D +PE +GLP F +
Sbjct:   210 RKATLVLSSLHDFKPELFGLPAFTE 234

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009117 "nucleotide metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0019982 Gs1l "GS1-like" [Drosophila melanogaster (taxid:7227)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 82/231 (35%), Positives = 122/231 (52%)

Query:     5 LKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
             L+K+  CV             +++   +  L  YGK +    K +++G      A  +VE
Sbjct:     6 LRKVTHCVFDMDGLLLDTER-LYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64

Query:    65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
              Y LP +  E+  +  +     +   + +PGA RL++HL  + VP  LA++S    +E K
Sbjct:    65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124

Query:   125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
              + QH   E FS+    + GS   EV  GKP+PDIFL AA R  +  +PS  LV EDS  
Sbjct:   125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181

Query:   177 GVVAGKAAGMEVVAVPSLPKQTHRYTA-ADEVINSLLDLRPEKWGLPPFQD 226
             GV A  +AGM+VV VP  P+ +   T+ A +V+ SL D +PE++GLP F D
Sbjct:   182 GVTAANSAGMQVVMVPD-PRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231

GO:0016787 "hydrolase activity" evidence=IEA

GO:0042060 "wound healing" evidence=IMP

UNIPROTKB|E1BRK1 HDHD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 70/203 (34%), Positives = 110/203 (54%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             +++ V +    ++GK +    K  ++GK  LE A II +   LP  K E ++E       
Sbjct:    11 LYTLVFEEICGRFGKSYTWDVKSLVMGKKALEGAQIIRDVLDLPITKEELLHESKMKQEK 70

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
                  + +PG N+LI+HL  H +P+A+A++S   T + K S ++  +N    +++G D E
Sbjct:    71 IFHTAELMPGVNKLIQHLHKHNIPIAVATSSAEVTFQMKTSRHKDFFNLFHHIVLGDDPE 130

Query:   144 VRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             V+ GKP PD FL  AKR +    P   LV EDS +GV    AAGM+VV +P      +  
Sbjct:   131 VKGGKPQPDAFLVCAKRFHPPAPPEKCLVFEDSPLGVKGALAAGMQVVMIPDENLSPNLK 190

Query:   202 TAADEVINSLLDLRPEKWGLPPF 224
               A  ++NS+ D +PE +GLP +
Sbjct:   191 KEATLLLNSMEDFKPELFGLPAY 213

GO:0016787 "hydrolase activity" evidence=IEA

RGD|1305101 Hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 73/205 (35%), Positives = 111/205 (54%)

Query:    26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
             ++++V +    +YGK+++   K  ++GK   E   IIV+   LP +K + + E       
Sbjct:    30 LYTDVFQAICSRYGKKYNWDVKSLVMGKKAPETTQIIVDFLKLPISKEQLLEESQERLQK 89

Query:    86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
              L     +PGA  LI HL  + +P ALA++S   + ++K S   G+   F  +++G D E
Sbjct:    90 VLHTAALMPGAEELIHHLRKNRLPFALATSSATLSFQTKTSRYKGFFSLFHHIVLGDDPE 149

Query:   144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
             V   KP+PDIFL  AKR +  P+    LV EDS  GV A  A GM+VV VP     +   
Sbjct:   150 VINSKPAPDIFLTCAKRFSPPPNPEDCLVFEDSPNGVEAAVACGMQVVMVPHENLSSDLT 209

Query:   202 TAADEVINSLLDLRPEKWGLPPFQD 226
             T A  V++SL + +PE +GLP F +
Sbjct:   210 TKATLVLSSLHEFKPELFGLPAFDE 234

GO:0016787 "hydrolase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!
4th Layer	2.7.1.26	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_V0054	riboflavin kinase (EC-2.7.1.26) (383 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.142.26.1	SubName- Full=Putative uncharacterized protein; (231 aa)						•			0.899
	gw1.120.130.1	riboflavin synthase (EC-2.5.1.9) (205 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	313
PLN02940	382	PLN02940, PLN02940, riboflavin kinase	0.0
PLN02811	220	PLN02811, PLN02811, hydrolase	2e-58
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	4e-40
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	2e-29
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	3e-26
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	6e-26
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	5e-25
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	7e-25
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	1e-19
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	9e-19
PRK10725	188	PRK10725, PRK10725, fructose-1-P/6-phosphogluconat	9e-19
pfam01687	125	pfam01687, Flavokinase, Riboflavin kinase	4e-18
PRK10826	222	PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase;	7e-17
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	1e-16
smart00904	124	smart00904, Flavokinase, Riboflavin kinase	2e-16
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	6e-16
PRK11587	218	PRK11587, PRK11587, putative phosphatase; Provisio	8e-16
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	5e-15
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	1e-14
TIGR01454	205	TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic	4e-14
PLN02770	248	PLN02770, PLN02770, haloacid dehalogenase-like hyd	3e-13
TIGR01449	213	TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas	4e-13
PLN02575	381	PLN02575, PLN02575, haloacid dehalogenase-like hyd	2e-12
PLN03243	260	PLN03243, PLN03243, haloacid dehalogenase-like hyd	5e-12
COG0196	304	COG0196, RibF, FAD synthase [Coenzyme metabolism]	9e-12
TIGR02253	221	TIGR02253, CTE7, HAD superfamily (subfamily IA) hy	2e-11
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	2e-11
PRK10563	221	PRK10563, PRK10563, 6-phosphogluconate phosphatase	7e-11
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	9e-11
PRK13288	214	PRK13288, PRK13288, pyrophosphatase PpaX; Provisio	1e-10
PRK13223	272	PRK13223, PRK13223, phosphoglycolate phosphatase;	2e-09
TIGR03351	220	TIGR03351, PhnX-like, phosphonatase-like hydrolase	5e-09
TIGR02252	203	TIGR02252, DREG-2, REG-2-like, HAD superfamily (su	6e-08
PRK05627	305	PRK05627, PRK05627, bifunctional riboflavin kinase	2e-07
PRK13226	229	PRK13226, PRK13226, phosphoglycolate phosphatase;	5e-07
TIGR00213	176	TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate	5e-06
TIGR00083	288	TIGR00083, ribF, riboflavin kinase/FMN adenylyltra	3e-05
TIGR01656	147	TIGR01656, Histidinol-ppas, histidinol-phosphate p	4e-05
TIGR01422	253	TIGR01422, phosphonatase, phosphonoacetaldehyde hy	7e-05
COG0241	181	COG0241, HisB, Histidinol phosphatase and related	1e-04
TIGR01458	257	TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam	4e-04
PRK13225	273	PRK13225, PRK13225, phosphoglycolate phosphatase;	6e-04
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	7e-04
PRK08942	181	PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p	0.001
TIGR01993	183	TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti	0.002
PRK13478	267	PRK13478, PRK13478, phosphonoacetaldehyde hydrolas	0.002
TIGR02254	224	TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I	0.002

>gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase

 Score =  579 bits (1494), Expect = 0.0
 Identities = 248/309 (80%), Positives = 273/309 (88%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
            A+PLKKL+S VILDLDGTLLNTDG+ S+VLK FLVKYGK+WDGRE  KIVGKTPLE AA
Sbjct: 3   AAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAA 62

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            +VEDYGLPC+  EF +E+  + S+  C +KALPGANRLIKHL  HGVPMALASNS RA 
Sbjct: 63  TVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRAN 122

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           IE+KIS   GW ESFSVIVG DEV  GKPSPDIFLEAAKRLN+EPS+ LVIEDS+ GV+A
Sbjct: 123 IEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMA 182

Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
           GKAAGMEV+AVPS+PKQTH Y++ADEVINSLLDL+PEKWGLPPF DWIEGTLP EPW+IG
Sbjct: 183 GKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIG 242

Query: 241 GPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 300
           GPV+KG GRGSKVLGIPTANLSTE YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP
Sbjct: 243 GPVIKGFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNP 302

Query: 301 YFDNAEKTI 309
           YF+N EKTI
Sbjct: 303 YFNNTEKTI 311

Length = 382

>gnl|CDD|178407 PLN02811, PLN02811, hydrolase

 Score =  186 bits (474), Expect = 2e-58
 Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 17/223 (7%)

Query: 16  LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKH 73
           +DG LL+T+  ++EV +  L +YGK +D   K K++GK  +E A I VE+ GL    +  
Sbjct: 1   MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPE 60

Query: 74  EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133
           +F+ E  +M  D       +PGA RL++HL   G+P+A+A+ SH+   + K   +HG  E
Sbjct: 61  DFLVEREAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQ-RHG--E 117

Query: 134 SFS----VIVGSD-EVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG 185
            FS    V+ G D EV+ GKP+PDIFL AA+R     ++P   LV ED+  GV A K AG
Sbjct: 118 LFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAG 177

Query: 186 MEVVAVP--SLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
           M VV VP   L K   +   AD+V++SLLD +PE+WGLPPF D
Sbjct: 178 MSVVMVPDPRLDKSYCK--GADQVLSSLLDFKPEEWGLPPFPD 218

Length = 220

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score =  139 bits (352), Expect = 4e-40
 Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDY-GLP 69
            VI D+DGTL++++ + +      L +YG E    E  ++ G        ++ +   G  
Sbjct: 4   AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63

Query: 70  CAKHEFV-NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
            A    +   +Y   +  L  +K +PG   L++ L   G+P+A+AS+S R   E ++  +
Sbjct: 64  PADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLAR 122

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
            G  + F VIV +D+V  GKP+PDI+L AA+RL ++P   +V+EDS  G+ A KAAGM V
Sbjct: 123 LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182

Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRPE 217
           V VP+   + H         +++L    E
Sbjct: 183 VGVPAGHDRPHLDPLDAHGADTVLLDLAE 211

Length = 221

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score =  110 bits (277), Expect = 2e-29
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           VI D+DG + +T  + ++  K    KYG  +D +    + G +  +    I++  G   +
Sbjct: 4   VIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGDGLS 63

Query: 72  ---KH---EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
               H   E  NE+Y      L  V  LPG   L+K L   G+ + L S+S  A  I +K
Sbjct: 64  LEEIHQLAERKNELYRE-LLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRILAK 122

Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
           +    G  + F  IV + EV+ GKP P+ FL AA+ L + P+  +V ED++ GV A +AA
Sbjct: 123 L----GLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAA 178

Query: 185 GMEVVAV 191
           GM  VAV
Sbjct: 179 GMFAVAV 185

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score =  102 bits (256), Expect = 3e-26
 Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 11/187 (5%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           VI DLDG + +T        K    + G  +D      + G +  E    I++  G   +
Sbjct: 2   VIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGGKKYS 61

Query: 72  KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
           + E        N+ Y      L     LPG   L+  L  + + +ALAS S  A TI  K
Sbjct: 62  EEEKEELAERKNDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTILEK 121

Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
           +       + F  IV   E++ GKP P+IFL AA+ L + PS  + IED+  G+ A KAA
Sbjct: 122 L----ELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAA 177

Query: 185 GMEVVAV 191
           GM  V V
Sbjct: 178 GMFAVGV 184

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score =  102 bits (255), Expect = 6e-26
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 14/214 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           ++ DLDGTL+++           L + G      E+ + +    L+E    +       A
Sbjct: 7   ILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEA 66

Query: 72  KHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
             E V  +   F      L + +  PG   L+  L   G  + + +N     ++  +   
Sbjct: 67  AAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKA 125

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
            G  + F VIVG D+V   KP P+  L   ++L ++P  +L++ DS+  ++A KAAG+  
Sbjct: 126 LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPA 185

Query: 189 VAV------PSLPKQTHRYTAADEVINSLLDLRP 216
           V V           Q      AD VI+SL +L  
Sbjct: 186 VGVTWGYNSREELAQAG----ADVVIDSLAELLA 215

Length = 220

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 98.6 bits (246), Expect = 5e-25
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 8/182 (4%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
           +I DLDGTL++ D +  E L+    +  G +    E  +  G    E  A ++ ++ +  
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60

Query: 71  A-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
               E + E               P    L++ L   GV + + SN  R  +E  +    
Sbjct: 61  DEILEALLEYNLESRLEP-----FPDVVELLRRLKAKGVKLVILSNGSREAVERLLEK-L 114

Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
           G  + F  +  SD+V   KP P+ +    +RL + P   L I+DS   + A +AAG++ V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174

Query: 190 AV 191
            V
Sbjct: 175 HV 176

Length = 176

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 98.3 bits (245), Expect = 7e-25
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 8/183 (4%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
            V+ DLDG L++T    +  +   + +        E       +           YG   
Sbjct: 1   AVLFDLDGVLVDT----AHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTM 56

Query: 71  AKHEFVNEVYSMFSDHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
           +  +       +F + L K  +K LPG   L++ L   G  +AL +NS RA  +  +   
Sbjct: 57  SAEDAQLLYKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE-- 114

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
            G    F V++ S +V  GKP PDI+L+A K+L ++PS  L ++DS  G+ A KAAGM  
Sbjct: 115 LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHT 174

Query: 189 VAV 191
           V V
Sbjct: 175 VLV 177

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 85.7 bits (212), Expect = 1e-19
 Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 17/218 (7%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE---EAAIIVEDYGL 68
           ++ DLDGTLL+ D      +     + G      E   +     LE          +YGL
Sbjct: 7   ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66

Query: 69  PCAK-----HEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
              +        + +  +   + L       +   P A   +K L      + + +N  R
Sbjct: 67  TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELG-KKYKLGILTNGAR 125

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
              E K+  Q G  + F  +  S++V   KP P+IF  A ++L + P  +L + DS+   
Sbjct: 126 PHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLEND 184

Query: 179 VAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214
           + G +A GM+ V +    K       A D  I+SL +L
Sbjct: 185 ILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222

Length = 229

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 81.9 bits (202), Expect = 9e-19
 Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 24/194 (12%)

Query: 9   MSCVILDLDGTLLNTDG------MFSEVLKTFLVKY--------GKEWDGREKHKIVGKT 54
           +  V+ DLDGTL + +          E      V           KE       +++ + 
Sbjct: 1   IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60

Query: 55  PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
              E  +                 V  + +         PGA   +K L   G+ +A+ +
Sbjct: 61  LAGEELLEELLRAGATVVAVLDLVVLGLIALTD---PLYPGAREALKELKEAGIKLAILT 117

Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPSSSLVI 171
             +R T  +           F  +V +D       GKP P IF  A + L ++P   L++
Sbjct: 118 GDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMV 173

Query: 172 EDSVIGVVAGKAAG 185
            D V  + A KAAG
Sbjct: 174 GDGVNDIPAAKAAG 187

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional

 Score = 82.0 bits (203), Expect = 9e-19
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)

Query: 13  ILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK 72
           I D+DGT+L+T+    +  +  L +YG ++D +    + G      A  I+E        
Sbjct: 9   IFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDP 68

Query: 73  HEFVNE----VYSMFSDHLCKVKALPGANRLIKHL-SCHG-VPMALASNSHRATIESKIS 126
           H    E    V SM  D    V+ LP    LI+ + + HG  PMA+ + S  A  E+ + 
Sbjct: 69  HALAREKTEAVKSMLLD---SVEPLP----LIEVVKAWHGRRPMAVGTGSESAIAEALL- 120

Query: 127 YQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
             H G    F  +V +D+V+  KP+PD FL  A+ + ++P+  +V ED+  G+ A +AAG
Sbjct: 121 -AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAG 179

Query: 186 MEVVAVPSL 194
           M+ V V  L
Sbjct: 180 MDAVDVRLL 188

Length = 188

>gnl|CDD|190069 pfam01687, Flavokinase, Riboflavin kinase

 Score = 78.7 bits (195), Expect = 4e-18
 Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P+ I G VV G GRG   LG PTANLS      +     +GVY     +  + VY  V +
Sbjct: 5   PYSISGTVVHGKGRGRT-LGFPTANLSLPKDKLL---PKNGVYAVRVKIDGK-VYPGVAN 59

Query: 296 IGWNPYFDNAEKTI 309
           IG+NP F   + TI
Sbjct: 60  IGYNPTFGGKKPTI 73

This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein known as RibC in Bacillus subtilis. The RibC protein from Bacillus subtilis has both flavokinase and flavin adenine dinucleotide synthetase (FAD-synthetase) activities. RibC plays an essential role in the flavin metabolism. This domain is thought to have kinase activity. Length = 125

>gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional

 Score = 77.7 bits (192), Expect = 7e-17
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 92  ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
            LPG    +      G+ + LAS S    +E  +       + F  +  ++++   KP P
Sbjct: 93  LLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHP 151

Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVIN 209
           +++L  A +L ++P + + +EDS  G++A KAA M  + VP+ P+Q +  R+  AD  + 
Sbjct: 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLE 210

Query: 210 SLLDLRPE 217
           SL +L   
Sbjct: 211 SLTELTAA 218

Length = 222

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score = 78.2 bits (193), Expect = 1e-16
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)

Query: 90  VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTG 147
           +   PG  RL+      G+ +A+ S S+   +   ++   G    +   V  G D+V   
Sbjct: 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG-DDVPKK 201

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
           KP PDI+  AA+ L ++PS  +V+EDSVIG+ A KAAGM  +   S       ++ AD V
Sbjct: 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAV 261

Query: 208 INSLLDLRPEKWGL 221
            + L D+  E + L
Sbjct: 262 FDCLGDVPLEDFDL 275

Length = 286

>gnl|CDD|214901 smart00904, Flavokinase, Riboflavin kinase

 Score = 74.0 bits (183), Expect = 2e-16
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P+ I G VV G  RG   LG PTANL  +    +     +GVY     +    +Y  V +
Sbjct: 5   PYSISGRVVHGDKRGRT-LGFPTANLPLDDRLLLP---KNGVYAVRVRV-DGKIYPGVAN 59

Query: 296 IGWNPYFDN 304
           IG  P F  
Sbjct: 60  IGTRPTFGG 68

Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase, which converts it into FMN, and FAD synthetase, which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme. the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases. This entry represents riboflavin kinase, which occurs as part of a bifunctional enzyme or a stand-alone enzyme. Length = 124

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 74.8 bits (185), Expect = 6e-16
 Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 60/239 (25%)

Query: 12  VILDLDGTLLNT--------DGMFSEV---------LKTF-------LVKYGKEWDGREK 47
           V  DLDGTL+++        +   + +         ++T+       LV+    W GRE 
Sbjct: 9   VAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGRE- 67

Query: 48  HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCH 106
                    +E         L   +  F    Y+   +++     L PG    +  L   
Sbjct: 68  --------PDEEL-------LEKLRELFD-RHYA---ENVAGGSRLYPGVKETLAALKAA 108

Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
           G P+A+ +N     +   +    G  + FSV++G D +   KP P   L A ++L ++P 
Sbjct: 109 GYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167

Query: 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDLRPE 217
             L + DS   + A +AAG   V V      T+ Y           D VI+   +L P 
Sbjct: 168 EMLFVGDSRNDIQAARAAGCPSVGV------TYGYNYGEPIALSEPDVVIDHFAELLPL 220

Length = 226

>gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional

 Score = 74.6 bits (184), Expect = 8e-16
 Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 19/137 (13%)

Query: 90  VKALPGANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGS 141
           + ALPGA  L+ HL+  G+P A        +AS  H+A          G      V V +
Sbjct: 82  ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GLPAP-EVFVTA 131

Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
           + V+ GKP PD +L  A+ L + P   +V+ED+  GV++G AAG  V+AV + P  T R 
Sbjct: 132 ERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPADTPRL 190

Query: 202 TAADEVINSLLDLRPEK 218
              D V++SL  L   K
Sbjct: 191 DEVDLVLHSLEQLTVTK 207

Length = 218

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 70.5 bits (173), Expect = 5e-15
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)

Query: 89  KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---- 144
           +++  PG    +K L   G+ +ALA+N  R  +   +  + G ++ F  ++ S+      
Sbjct: 22  ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYY 80

Query: 145 ------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
                         GKP+PD  L A K L ++P   L++ DS+  +   KAAG   VAV
Sbjct: 81  PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 74.1 bits (182), Expect = 1e-14
 Identities = 39/98 (39%), Positives = 57/98 (58%)

Query: 94  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
           PGA  LI      G+ +A+AS++ R  +++ ++        F  IV +D     KP+PDI
Sbjct: 164 PGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI 223

Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
           FL AAK L +  S  +VIED++ GV A +AAGM  +AV
Sbjct: 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261

Length = 1057

>gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein

 Score = 69.5 bits (170), Expect = 4e-14
 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 32/192 (16%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------IV 63
           V+ DLDG L+++   F+ + + F + Y +E  G       G  P EE           I+
Sbjct: 1   VVFDLDGVLVDS---FAVMREAFAIAY-REVVGD------GPAPFEEYRRHLGRYFPDIM 50

Query: 64  EDYGLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH----R 118
              GLP    E FV E Y +      +V+  PG   L+  L   GV  A+A+       R
Sbjct: 51  RIMGLPLEMEEPFVRESYRLAG----EVEVFPGVPELLAELRADGVGTAIATGKSGPRAR 106

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
           + +E+      G    F  ++GSDEV   KP+PDI  EA + L++ P  ++++ D+V  +
Sbjct: 107 SLLEAL-----GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDL 161

Query: 179 VAGKAAGMEVVA 190
            + +AAG   VA
Sbjct: 162 ASARAAGTATVA 173

The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205

>gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein

 Score = 67.9 bits (166), Expect = 3e-13
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 19/194 (9%)

Query: 9   MSCVILDLDGTLLNTDGM----FSEVLKTFLVKYGKEWDGREK---HKIVGKTPLEEAAI 61
           +  V+ D+DGTL ++D +    F E+L+      G      E+     I GK   + A  
Sbjct: 22  LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPIT--EEFFVENIAGKHNEDIALG 79

Query: 62  IVED---YGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSH 117
           +  D    GL     +F ++  ++F      ++K L G  +L K +   G+  A  +N+ 
Sbjct: 80  LFPDDLERGL-----KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAP 134

Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
           R   E  IS   G ++ F  ++   E    KP PD +L+A + L +    + V EDSV G
Sbjct: 135 RENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSG 193

Query: 178 VVAGKAAGMEVVAV 191
           + AG AAGM VV +
Sbjct: 194 IKAGVAAGMPVVGL 207

Length = 248

>gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic

 Score = 66.8 bits (163), Expect = 4e-13
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 91  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
              PG    +  L   G+ + L +N         +    G  + FSV++G D +   KP 
Sbjct: 85  SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPH 143

Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
           PD  L AA+RL + P   + + DS + + A +AAG   V +
Sbjct: 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLL 184

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213

>gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 95  GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154
           G+   +  L  + +PMAL S   R T+E+ I    G    FSVIV +++V  GKP P++F
Sbjct: 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMF 278

Query: 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           + AA+ LN  P   +V  +S   V A   A M+ VAV S     +   AAD V+  L +L
Sbjct: 279 IYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337

Length = 381

>gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional

 Score = 64.3 bits (156), Expect = 5e-12
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)

Query: 91  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
           +  PG+   ++ L  H +P+A+AS   R  +E  I    G    FSV++ +++V  GKP 
Sbjct: 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPD 167

Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
           P++F+ AA+RL   P   +V  +S   V A     M+ VAV       +  +A D V+  
Sbjct: 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRR 226

Query: 211 LLDL 214
           L DL
Sbjct: 227 LDDL 230

Length = 260

>gnl|CDD|223274 COG0196, RibF, FAD synthase [Coenzyme metabolism]

 Score = 64.2 bits (157), Expect = 9e-12
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P+ I G VV G   G   LG PTAN+  +           GVY     L   GVY  V +
Sbjct: 185 PYSIEGKVVHGQKLGRT-LGFPTANIYLKDNVLP----AFGVYAVRVKL-DGGVYPGVAN 238

Query: 296 IGWNPYFDNAEKTI 309
           +G+ P  D +E+++
Sbjct: 239 VGYRPTVDGSERSL 252

Length = 304

>gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 47/225 (20%), Positives = 88/225 (39%), Gaps = 31/225 (13%)

Query: 12  VILDLDGTLLNTDGMFSEVLKT---FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
           +  DLD TL++T G+  +  +     L++ G   D  E ++ + K        ++++YG 
Sbjct: 5   IFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLK--------LIKEYGS 56

Query: 69  PCAKH---------------EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
               H                    VY+        ++  PG    +  L   G  + + 
Sbjct: 57  NYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGII 116

Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
           ++        K+  + G  + F  ++ S+E    KP P IF  A KRL ++P  ++++ D
Sbjct: 117 TDGLPVKQWEKLE-RLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGD 175

Query: 174 SVI-GVVAGKAAGMEVVAVPSLPKQTHR---YTAADEVINSLLDL 214
            +   +   K  GM+ V +            Y   D  I+SL +L
Sbjct: 176 RLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220

This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 203
           GKP+P +   A +RL ++P   ++I DS   ++A +AAG+  + V      T   TA   
Sbjct: 3   GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57

Query: 204 ------ADEVINSLLDL 214
                  D V++SL DL
Sbjct: 58  ERAPGRPDYVVDSLADL 74

Length = 74

>gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 31/193 (16%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE-AAIIVEDYGLP 69
            V  D DGTL++++ + S    T   ++G      E  K      L E   II +++G+ 
Sbjct: 6   AVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVT 65

Query: 70  CAKHE----FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
            AK E    +  EV  +F   L   + + GAN L++ ++   VPM + SN       SK+
Sbjct: 66  LAKAELEPVYRAEVARLFDSEL---EPIAGANALLESIT---VPMCVVSNGP----VSKM 115

Query: 126 SYQHGWNES----------FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
             QH   ++          FS   G D ++  KP P +   AA+ +N+   + ++++DS 
Sbjct: 116 --QHSLGKTGMLHYFPDKLFS---GYD-IQRWKPDPALMFHAAEAMNVNVENCILVDDSS 169

Query: 176 IGVVAGKAAGMEV 188
            G  +G AAGMEV
Sbjct: 170 AGAQSGIAAGMEV 182

Length = 221

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 58.9 bits (143), Expect = 9e-11
 Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 23/179 (12%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK--TPLEEAAIIVEDYGLP 69
           ++ D+DGTL++                       E+  +       L+    + E+    
Sbjct: 2   ILFDIDGTLVDIKFAIRRAFAQTF----------EEFGLNPAAFKRLKALRGLAEE---- 47

Query: 70  CAKHEFVNEVYSMFSDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
                   E       H+    +   +PGA  L+  L   G+ + + SN      +  + 
Sbjct: 48  -LLWRIATEALEELQGHIGYDAEEAYIPGAADLLPRLKEAGIKLGIISNGSLRAQKLLLR 106

Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
             HG  + F +I+GSDE+ + KP P+IFL A + L + P   L + D++  +   + AG
Sbjct: 107 K-HGLGDYFELILGSDEIGS-KPEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

>gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK---TPLEEA-AIIVEDYG 67
           V+ DLDGTL+NT+ +   ++ +FL      +  + K + V       L +  + I E   
Sbjct: 6   VLFDLDGTLINTNEL---IISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESK- 61

Query: 68  LPCAKHEFVNEVYSMFSD-----HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
                   V E+ + + +     H   V         +K L   G  + + +   R T+E
Sbjct: 62  --------VEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVE 113

Query: 123 S--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
              K++   G +E F V++  D+V   KP P+  L+A + L  +P  +L++ D+   ++A
Sbjct: 114 MGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILA 170

Query: 181 GKAAGMEVVAV 191
           GK AG +   V
Sbjct: 171 GKNAGTKTAGV 181

Length = 214

>gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 66/242 (27%), Positives = 93/242 (38%), Gaps = 57/242 (23%)

Query: 7   KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK------------------- 47
           +L   V+ DLDGTL+++    +  +   L++ G+   G E                    
Sbjct: 11  RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAG 70

Query: 48  ---HKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL 103
              H  V     E+A A+ +E Y      HE    VY             PG    +K L
Sbjct: 71  SIDHDGVDDELAEQALALFMEAYA---DSHEL-TVVY-------------PGVRDTLKWL 113

Query: 104 SCHGVPMALASNSHRATI-----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158
              GV MAL +N     +     + KI     W      I+G D +   KP P   L   
Sbjct: 114 KKQGVEMALITNKPERFVAPLLDQMKIGRYFRW------IIGGDTLPQKKPDPAALLFVM 167

Query: 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE----VINSLLDL 214
           K   + PS SL + DS   V+A KAAG++ VA+       H    A+E    VI+ L  L
Sbjct: 168 KMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY--GYNHGRPIAEESPALVIDDLRAL 225

Query: 215 RP 216
            P
Sbjct: 226 LP 227

Length = 272

>gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)

Query: 10  SCVILDLDGTLLNTDGMFSEVLKTFLVKYG---------KEWDGREKHKIV------GKT 54
           S V+LD+ GT ++ DG+    L+  +   G           W G+ K + +         
Sbjct: 2   SLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADGA 61

Query: 55  PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
              EA     D+           E  +   D      ALPGA    + L   G+ +AL +
Sbjct: 62  DEAEAQAAFADF----------EERLAEAYDDG-PPVALPGAEEAFRSLRSSGIKVALTT 110

Query: 115 NSHRATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVI 171
              R T E ++  + GW   +    +V   +V  G+P+PD+ L A +   ++   S  V 
Sbjct: 111 GFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVA 169

Query: 172 EDSVIGVVAGKAAGMEVVA 190
            D+   + AG  AG   V 
Sbjct: 170 GDTPNDLEAGINAGAGAVV 188

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220

>gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)

Query: 69  PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKI 125
           P +  +   E+YS F+      +  P A +L+K L   G+ + + SN     R  +E+  
Sbjct: 84  PESFEKIFEELYSYFATPEP-WQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEAL- 141

Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAA 184
               G  E F  +V S EV   KP P IF EA +R  + P  +L I DS+       +AA
Sbjct: 142 ----GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAA 197

Query: 185 GM 186
           G 
Sbjct: 198 GW 199

This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203

>gnl|CDD|235536 PRK05627, PRK05627, bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

 Score = 51.3 bits (124), Expect = 2e-07
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 239 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVMSIG 297
           I G VV G   G   LG PTANL            P  GVY     +  +  Y  V +IG
Sbjct: 188 ISGRVVHGQKLGRT-LGFPTANLPLPDRV-----LPADGVYAVRVKVDGK-PYPGVANIG 240

Query: 298 WNPYFDNAEKTI 309
             P  D   + +
Sbjct: 241 TRPTVDGGRQLL 252

Length = 305

>gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional

 Score = 49.5 bits (118), Expect = 5e-07
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
           Q GW +  +V++G D +   KP P   L AA+R+ + P+  + + D    ++A +AAGM 
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190

Query: 188 VVAV 191
            VA 
Sbjct: 191 SVAA 194

Length = 229

>gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase

 Score = 45.7 bits (108), Expect = 5e-06
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 205
           KP P + L+A K L+++ + S ++ D +  + AG AA     V+     P        AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165

Query: 206 EVINSLLDL 214
            V+NSL DL
Sbjct: 166 WVLNSLADL 174

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176

>gnl|CDD|232818 TIGR00083, ribF, riboflavin kinase/FMN adenylyltransferase

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 235 EPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVM 294
            P++I G V+ G   G   LG PTAN+  +     L     G Y     L+    Y  V 
Sbjct: 167 RPYFICGTVIHGQKLGRT-LGFPTANIKLKNQVLPL---KGGYYVVVVLLNGE-PYPGVG 221

Query: 295 SIGWNPYFD 303
           +IG  P F 
Sbjct: 222 NIGNRPTFI 230

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase) [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD]. Length = 288

>gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193
           KP P + LEA KRL ++ S SLV+ D +  + A + AG+  V +  
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146

This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147

>gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 94  PGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNESFSVIVGSDEVRTGKPSP 151
           PGA  +I +L   G+ +   +   R  ++  +  +   G+   +   V +D+V  G+P+P
Sbjct: 102 PGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDY--NVTADDVPAGRPAP 159

Query: 152 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
            + L+ A  L +   +++V + D+V  +  G+ AGM  V V
Sbjct: 160 WMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200

This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253

>gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 206
           KP P + L A K  N++ S S V+ D +  + A + AG++ V+ +  +   T     A  
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164

Query: 207 VINSLLDL 214
           V +SL + 
Sbjct: 165 VFDSLAEF 172

Length = 181

>gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 205
           GKPS   FLEA +    EP  +++I D     V G +  GM  + V     +T +Y  +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232

Query: 206 E 206
           E
Sbjct: 233 E 233

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257

>gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional

 Score = 40.5 bits (94), Expect = 6e-04
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 30/201 (14%)

Query: 3   QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------------KEWDGREKHKI 50
           Q   + +  +I D DGTL+++      +       +G            ++W  R   + 
Sbjct: 56  QSYPQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRR 115

Query: 51  VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
            G +P ++A ++                V     D L  ++  PG   L+  L    + +
Sbjct: 116 AGLSPWQQARLL--------------QRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCL 161

Query: 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
            + S++ R  IE+ +  Q G    FSV+     + + + +     +   R   +P++ + 
Sbjct: 162 GILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRA---LSQLVAREGWQPAAVMY 217

Query: 171 IEDSVIGVVAGKAAGMEVVAV 191
           + D    V A +  G+  VAV
Sbjct: 218 VGDETRDVEAARQVGLIAVAV 238

Length = 273

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 191
           GKPSP I+  A ++L ++ S  L++ D +   ++  KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234

Length = 269

>gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
           KP P + L  A+RLN++ + S ++ DS+  + A  AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140

Length = 181

>gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
           KPSP  + +A +   ++P  ++  +DS   + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183

This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183

>gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
            +V +D+V  G+P P + L+ A  L +   ++ V ++D+V G+  G  AGM  V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202

Length = 267

>gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 26/198 (13%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKE----------------WDGREKHKIVGKT- 54
           ++ DLD T+L+     +  L+      G                  W   E+ KI     
Sbjct: 4   LLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEV 63

Query: 55  PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALA 113
                + ++++Y    A    +N+ Y  F +   ++  LPGA  L+++L       + + 
Sbjct: 64  VNTRFSALLKEYNTE-ADEALLNQKYLRFLEEGHQL--LPGAFELMENL--QQKFRLYIV 118

Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
           +N  R T   ++  + G    F  I  S++    KP  +IF  A +R+        L+I 
Sbjct: 119 TNGVRETQYKRLR-KSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIG 177

Query: 173 DSVIG-VVAGKAAGMEVV 189
           DS+   +  G+ AG++  
Sbjct: 178 DSLTADIKGGQNAGLDTC 195

This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	313
PLN02940	382	riboflavin kinase	100.0
TIGR00083	288	ribF riboflavin kinase/FMN adenylyltransferase. mu	100.0
PRK05627	305	bifunctional riboflavin kinase/FMN adenylyltransfe	99.98
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.97
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.97
COG0196	304	RibF FAD synthase [Coenzyme metabolism]	99.97
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.97
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.96
COG0546	220	Gph Predicted phosphatases [General function predi	99.96
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.96
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.96
PRK13288	214	pyrophosphatase PpaX; Provisional	99.96
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.96
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.96
PLN02575	381	haloacid dehalogenase-like hydrolase	99.96
PF01687	125	Flavokinase: Riboflavin kinase; InterPro: IPR01586	99.96
PRK11587	218	putative phosphatase; Provisional	99.96
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.96
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.96
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.96
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.96
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.95
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.95
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.95
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.95
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.95
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.95
PLN02811	220	hydrolase	99.95
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.95
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.94
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.94
PRK09449	224	dUMP phosphatase; Provisional	99.94
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.94
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.94
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.93
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.93
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.93
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.93
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.92
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.91
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.91
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.9
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.9
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.9
KOG3110	153	consensus Riboflavin kinase [Coenzyme transport an	99.89
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.89
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.88
PHA02597	197	30.2 hypothetical protein; Provisional	99.88
PRK07143	279	hypothetical protein; Provisional	99.88
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.87
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.84
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.84
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.82
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.81
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.81
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.8
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.8
PLN02954	224	phosphoserine phosphatase	99.79
PRK06769	173	hypothetical protein; Validated	99.79
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.78
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.77
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.77
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.76
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.76
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.76
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.74
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.7
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.7
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.7
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.69
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.65
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.65
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.63
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.63
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.62
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.61
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.61
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.6
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.6
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.58
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.57
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.57
PRK08238	479	hypothetical protein; Validated	99.56
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.56
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.55
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.55
PHA02530	300	pseT polynucleotide kinase; Provisional	99.54
PRK11590	211	hypothetical protein; Provisional	99.53
PRK10444	248	UMP phosphatase; Provisional	99.5
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.48
PLN02645	311	phosphoglycolate phosphatase	99.45
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.4
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	99.39
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.38
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.37
COG4229	229	Predicted enolase-phosphatase [Energy production a	99.37
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.36
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.36
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.35
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.35
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.32
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.28
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.27
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	99.26
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.25
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.23
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.21
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.2
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.2
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	99.16
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.13
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.1
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.05
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.05
PTZ00445	219	p36-lilke protein; Provisional	99.02
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.98
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.98
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.97
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.97
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.94
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	98.93
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.9
PRK10513	270	sugar phosphate phosphatase; Provisional	98.89
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.89
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.88
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.87
PRK10976	266	putative hydrolase; Provisional	98.87
PLN02887	580	hydrolase family protein	98.8
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.78
COG4359	220	Uncharacterized conserved protein [Function unknow	98.74
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.73
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	98.73
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.72
cd02064	180	FAD_synthetase_N FAD synthetase, N-terminal domain	98.68
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.68
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.63
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	98.61
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.59
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.57
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.57
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.54
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.5
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.45
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	98.43
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.37
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.37
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.37
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.36
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	98.34
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	98.31
COG4996	164	Predicted phosphatase [General function prediction	98.29
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.27
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.26
PLN02177	497	glycerol-3-phosphate acyltransferase	98.21
COG4087	152	Soluble P-type ATPase [General function prediction	98.2
PLN02382	413	probable sucrose-phosphatase	98.19
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.16
PRK10671	834	copA copper exporting ATPase; Provisional	98.16
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.13
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.11
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	98.11
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	98.08
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.95
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.9
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	97.89
COG3700	237	AphA Acid phosphatase (class B) [General function	97.86
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.82
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.68
COG5663	194	Uncharacterized conserved protein [Function unknow	97.59
PLN02423	245	phosphomannomutase	97.54
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	97.49
PLN02645	311	phosphoglycolate phosphatase	97.49
PTZ00174	247	phosphomannomutase; Provisional	97.49
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	97.46
COG2503	274	Predicted secreted acid phosphatase [General funct	97.43
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.41
PRK14010	673	potassium-transporting ATPase subunit B; Provision	97.37
PRK01122	679	potassium-transporting ATPase subunit B; Provision	97.34
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.25
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	97.22
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	97.2
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.19
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.15
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	97.13
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	97.13
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.11
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	97.07
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.04
PRK15122	903	magnesium-transporting ATPase; Provisional	97.02
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	96.99
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	96.98
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.8
PLN02499	498	glycerol-3-phosphate acyltransferase	96.76
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	96.44
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	96.44
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	96.41
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	96.27
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	96.17
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	96.14
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	96.03
COG4030	315	Uncharacterized protein conserved in archaea [Func	96.0
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	95.97
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.97
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	95.58
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	95.48
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	95.47
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	94.8
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	94.8
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	94.67
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	94.63
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	94.21
cd02169	297	Citrate_lyase_ligase Citrate lyase ligase. Citrate	94.21
PLN03190	1178	aminophospholipid translocase; Provisional	93.68
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	93.55
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	93.28
KOG1618	389	consensus Predicted phosphatase [General function	93.1
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	92.94
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	92.82
smart00764	182	Citrate_ly_lig Citrate lyase ligase C-terminal dom	92.81
PLN02580	384	trehalose-phosphatase	92.47
PLN03017	366	trehalose-phosphatase	92.27
PLN02151	354	trehalose-phosphatase	91.79
PRK10444	248	UMP phosphatase; Provisional	91.73
KOG4549	144	consensus Magnesium-dependent phosphatase [General	91.3
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	90.3
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	90.08
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	88.62
KOG0206	1151	consensus P-type ATPase [General function predicti	88.61
PTZ00174	247	phosphomannomutase; Provisional	87.93
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	87.06
KOG2116	738	consensus Protein involved in plasmid maintenance/	86.78
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	83.8
PF06574	157	FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof	82.82
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	82.79
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	81.85
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	81.83
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	80.5

>PLN02940 riboflavin kinase

Probab=100.00  E-value=6.6e-62  Score=434.36  Aligned_cols=313  Identities=79%  Similarity=1.286  Sum_probs=274.0

Q ss_pred             CCcc--cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHH
Q 021360            1 MAQP--LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE   78 (313)
Q Consensus         1 M~~~--~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (313)
                      |+.+  ....+++|+||+||||+|+...+..++..+++++|...+.+......|....+.+..++..++.+...+++...
T Consensus         1 ~~~~~~~~~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (382)
T PLN02940          1 MSAAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSE   80 (382)
T ss_pred             CCCCccccccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            5543  23468999999999999999999999999999999888877778888888888888888888887777777777


Q ss_pred             HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHH
Q 021360           79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        79 ~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      +.+.+...+....++||+.++|+.|++.|++++++||++...+...+.++.++..+|+.+++++++...||+|+.+..++
T Consensus        81 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~  160 (382)
T PLN02940         81 ITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAA  160 (382)
T ss_pred             HHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHH
Confidence            77777666677889999999999999999999999999999888777447899999999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccc
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWY  238 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~  238 (313)
                      ++++++|++|++|||+..|+.+|+++|+.++++..+.........++.++.++.++....+++|++++|+.+.+|+|||.
T Consensus       161 ~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~  240 (382)
T PLN02940        161 KRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWH  240 (382)
T ss_pred             HHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEE
Confidence            99999999999999999999999999999999987543332334688999999999888899999999999999999999


Q ss_pred             cccceeeeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          239 IGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       239 ~~g~v~~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      ++|+|+||+++||++||||||||.+++..+++|.++.||||+|+.+.++.+|+||+|||+||||++.+.+||+||
T Consensus       241 ~~G~Vv~G~~~G~~~lg~PTaNl~~~~~~~~~~~p~~GVY~~~~~~~~~~~~~~v~niG~~Pt~~~~~~~~E~~i  315 (382)
T PLN02940        241 IGGPVIKGFGRGSKVLGIPTANLSTENYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTIEPWL  315 (382)
T ss_pred             EEEEEEeCCccCcccCCCCcccCCcchhhhhcCCCCCEEEEEEEEECCCceEEEEEEecCCCccCCCccEEEEEE
Confidence            999999999999997799999999876423564226899999999843358999999999999987677899996

>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase

Probab=100.00  E-value=9.1e-34  Score=241.16  Aligned_cols=174  Identities=21%  Similarity=0.204  Sum_probs=144.9

Q ss_pred             HHHHHHHHHHCCCCEEEE--------eCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCC
Q 021360           96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        96 v~e~l~~l~~~g~~~~i~--------s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~  164 (313)
                      ..+-++.+.+.|+...++        ..++++|++..+.+.+++    ..+++|+|+.   .++++.+.+++.++++|+.
T Consensus        56 ~~~k~~~l~~~Gvd~~~~~~F~~~~a~ls~e~Fi~~~l~~~l~~----~~ivvG~Df~FG~~~~G~~~~L~~~~~~~g~~  131 (288)
T TIGR00083        56 LEDKARQLQIKGVEQLLVVVFDEEFANLSALQFIDQLIVKHLHV----KFLVVGDDFRFGHDRQGDFLLLQLFGNTTIFC  131 (288)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHHHhccCC----cEEEECCCccCCCCCCCCHHHHHHhccccCcE
Confidence            456677788888776553        356778888777566777    8899999987   5567888899888887776


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCcccccccee
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV  244 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~  244 (313)
                                             +..++... .. ...||+.+++.|.+|+++.          |+.+|||||.++|+|+
T Consensus       132 -----------------------v~~~~~~~-~~-~~ISST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~Vv  176 (288)
T TIGR00083       132 -----------------------VIVKQLFC-QD-IRISSSAIRQALKNGDLEL----------ANKLLGRPYFICGTVI  176 (288)
T ss_pred             -----------------------EEEecccc-CC-CeECHHHHHHHHHcCCHHH----------HHHhhhhhhccceEEE
Confidence                                   55555533 33 4568889999999999999          9999999999999999


Q ss_pred             eeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       245 ~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      ||+++||+ ||||||||.+++. +++|  +.|||++++.+ ++..|+||+|||+||||++.+.++|+||
T Consensus       177 ~G~~~Gr~-lGfPTaNl~~~~~-~~~p--~~GVYa~~v~i-~~~~y~~v~niG~~PT~~~~~~~~E~~i  240 (288)
T TIGR00083       177 HGQKLGRT-LGFPTANIKLKNQ-VLPL--KGGYYVVVVLL-NGEPYPGVGNIGNRPTFIGQQLVIEVHL  240 (288)
T ss_pred             ecCCCccc-ccCceEEecCccc-ccCC--CcceEEEEEEe-CCeEEEEEEEeCCCCccCCCceEEEEEe
Confidence            99999999 9999999999875 6788  79999999998 7788999999999999987667899997

multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).

>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed

Probab=99.98  E-value=3.5e-32  Score=233.86  Aligned_cols=174  Identities=26%  Similarity=0.300  Sum_probs=143.3

Q ss_pred             HHHHHHHHHHCCCCEEEE--------eCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCC
Q 021360           96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        96 v~e~l~~l~~~g~~~~i~--------s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~  164 (313)
                      ..+-+..+++.|+...++        ..+++++++.++.+.+++    +.+++|+|+.   .++++.+.+++.++.+|++
T Consensus        72 ~eeR~~~l~~~gVD~~~~~~F~~~~~~ls~e~Fi~~~l~~~l~~----~~iVvG~Df~FG~~~~G~~~~L~~~~~~~g~~  147 (305)
T PRK05627         72 LRDKAELLAELGVDYVLVLPFDEEFAKLSAEEFIEDLLVKGLNA----KHVVVGFDFRFGKKRAGDFELLKEAGKEFGFE  147 (305)
T ss_pred             HHHHHHHHHHcCCCEEEEecCCHHHhcCCHHHHHHHHHHhccCC----CEEEECCCCCCCCCCCCCHHHHHHHHHHcCcE
Confidence            456677777778776664        336778888766566777    8899999986   4557788888888888887


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCcccccccee
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV  244 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~  244 (313)
                                             ++.++.. .......+|+.+++.+.+|++..          |+.+|||||.++|+|+
T Consensus       148 -----------------------v~~v~~~-~~~~~~ISST~IR~~I~~G~i~~----------A~~lLg~~y~~~g~V~  193 (305)
T PRK05627        148 -----------------------VTIVPEV-KEDGERVSSTAIRQALAEGDLEL----------ANKLLGRPYSISGRVV  193 (305)
T ss_pred             -----------------------EEEeccE-ecCCCcCchHHHHHHHHcCCHHH----------HHhhhcCCCceEEEEE
Confidence                                   5555553 23334568889999999999999          9999999999999999


Q ss_pred             eeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       245 ~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      ||+++||+ ||||||||.+++.  .+|  +.|||++|+.+ ++..|+||+|||+||||++++.++|+||
T Consensus       194 ~G~~~Gr~-lgfPTaNl~~~~~--~~p--~~GVY~~~~~i-~~~~y~~~~~iG~~ptf~~~~~~~E~~i  256 (305)
T PRK05627        194 HGQKLGRT-LGFPTANLPLPDR--VLP--ADGVYAVRVKV-DGKPYPGVANIGTRPTVDGGRQLLEVHL  256 (305)
T ss_pred             ECcccCcc-ccceeEeecCccC--CCC--CceEEEEEEEE-CCEEEEEEEEecCCCccCCCceEEEEEe
Confidence            99999999 9999999999884  448  79999999998 7788999999999999987677899996

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.97  E-value=1.1e-28  Score=206.49  Aligned_cols=208  Identities=22%  Similarity=0.386  Sum_probs=170.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGL-PCAKHEFVNEVYSMFS   84 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   84 (313)
                      .++++|+||+||||+|+...+..++.++++++|...+. .......|.........+....+. ......+...+.+.+.
T Consensus         5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (222)
T PRK10826          5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVI   84 (222)
T ss_pred             ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987765 455666677666655555554443 2234444455544444


Q ss_pred             hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ... ....++||+.++|+.|++.|++++++|++....++..+ +++++..+|+.+++++++..+||+|+.++.+++++|+
T Consensus        85 ~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~  163 (222)
T PRK10826         85 SLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGV  163 (222)
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCC
Confidence            332 45789999999999999999999999999999888888 8899999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc-cccccceeeccccccC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLR  215 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~s~~ii~~l~e~~  215 (313)
                      +|++|++|||+.+|+.+|+++|++++++..+....+ ....++.++.++.++.
T Consensus       164 ~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~  216 (222)
T PRK10826        164 DPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT  216 (222)
T ss_pred             CHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence            999999999999999999999999999988543322 2335788888888863

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.97  E-value=4.9e-29  Score=207.28  Aligned_cols=186  Identities=34%  Similarity=0.524  Sum_probs=162.9

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSD   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~   85 (313)
                      ++++|+|||||||+||+..+.++|.++++++|...+.+......|.........+.+......  +..............
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL   80 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999888877788777777777777665542  233333334444444


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      ......+.||+.++|+.|+++|++++++|++++..+...+ ...|+.++|+.+++++++..+||+|+.|..+++++|++|
T Consensus        81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P  159 (221)
T COG0637          81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP  159 (221)
T ss_pred             hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence            5567899999999999999999999999999999998888 889999999999999999999999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++|++|+|+.+++.+|+++||.++.+...
T Consensus       160 ~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         160 EECVVVEDSPAGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             HHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence            99999999999999999999999999873

>COG0196 RibF FAD synthase [Coenzyme metabolism]

Probab=99.97  E-value=2.5e-30  Score=219.35  Aligned_cols=172  Identities=26%  Similarity=0.368  Sum_probs=140.7

Q ss_pred             HHHHHHHHHHCCCCEEE--------EeCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCC
Q 021360           96 ANRLIKHLSCHGVPMAL--------ASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        96 v~e~l~~l~~~g~~~~i--------~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~  164 (313)
                      ..+-++.|...|+...+        .+.++.+|+. .+.+.++.    +.+++++|+.   .++++.+.++...++ |+.
T Consensus        74 ~~~k~~~l~~~gvd~~~v~~F~~~fa~ls~~~Fv~-~lv~~l~~----k~ivvG~DF~FGk~~~g~~~~L~~~~~~-gf~  147 (304)
T COG0196          74 LREKIRLLAGYGVDALVVLDFDLEFANLSAEEFVE-LLVEKLNV----KHIVVGFDFRFGKGRQGNAELLRELGQK-GFE  147 (304)
T ss_pred             HHHHHHHHHhcCCcEEEEEeCCHhHhhCCHHHHHH-HHHhccCC----cEEEEecccccCCCCCCCHHHHHHhccC-Cce
Confidence            45667778888865554        3566788888 44477877    8899998887   445566777777766 777


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCcccccccee
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV  244 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~  244 (313)
                                             ++.++... .+....+|+.+++.|.+++.+.          |+.+||+||.++|+|+
T Consensus       148 -----------------------v~~v~~~~-~~~~~iSSt~IR~~L~~gdl~~----------A~~lLG~py~i~G~Vv  193 (304)
T COG0196         148 -----------------------VTIVPKIN-EEGIRISSTAIRQALREGDLEE----------ANKLLGRPYSIEGKVV  193 (304)
T ss_pred             -----------------------EEEeccEe-cCCcEEchHHHHHHHhcCCHHH----------HHHhcCCCeEEEEEEE
Confidence                                   66666643 3334568899999999999999          9999999999999999


Q ss_pred             eeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          245 KGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       245 ~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      ||+++||+ +||||||+.++.  ..+|  +.||||+++.+ +++.|+||+|||+||||++.++++|+||
T Consensus       194 ~G~~~Gr~-lGfPTaNi~~~~--~~~~--~~GVYav~v~~-~~~~~~gv~~vG~rpt~~~~~~~lEvhi  256 (304)
T COG0196         194 HGQKLGRT-LGFPTANIYLKD--NVLP--AFGVYAVRVKL-DGGVYPGVANVGYRPTVDGSERSLEVHI  256 (304)
T ss_pred             cccccccc-cCCCcccccccc--cccc--CCeeEEEEEEE-CCccccceEEecccccccCCeeEEEEEE
Confidence            99999999 999999999988  6777  68999999999 5555999999999999988789999996

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.97  E-value=1.6e-28  Score=208.44  Aligned_cols=206  Identities=26%  Similarity=0.352  Sum_probs=162.7

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCC----CCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS   81 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (313)
                      .++++|+|||||||+|+...+..++.++++++|.    +.+.+.. ....|......+..++.. ... ...++......
T Consensus        20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~~   97 (248)
T PLN02770         20 APLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKEA   97 (248)
T ss_pred             CccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHHH
Confidence            4689999999999999999999999999999864    3444433 345676666555444321 111 11122233344


Q ss_pred             HHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           82 MFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        82 ~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      .+.... ....++||+.++|+.|++.|++++++||++...++..+ +++++..+|+.+++++++...||+|+.|..++++
T Consensus        98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~  176 (248)
T PLN02770         98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV  176 (248)
T ss_pred             HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence            444333 35789999999999999999999999999999999888 8899999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-ccccceeeccccccC
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR  215 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~s~~ii~~l~e~~  215 (313)
                      ++++|++|++|||+..|+.+|+++|++++++.++...... ...++.++.++.+..
T Consensus       177 ~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~  232 (248)
T PLN02770        177 LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK  232 (248)
T ss_pred             hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence            9999999999999999999999999999999875432222 236888999998743

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.96  E-value=1.6e-28  Score=208.62  Aligned_cols=207  Identities=23%  Similarity=0.308  Sum_probs=163.1

Q ss_pred             cCccEEEEecCCccccCh-HHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   83 (313)
                      ..+|+|+|||||||+||. ..+..+|.++++++|...+.... ....|.+....+..++.. .... ....+.......+
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~-~~~~~~~~~l~~~~~~~~  100 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCW-SRDFLQMKRLAIRKEDLY  100 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence            368999999999999995 56778999999999988766544 567788877766665432 1110 1122223333333


Q ss_pred             Hhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           84 SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        84 ~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .... ....++||+.++|+.|++.|++++++||++...+...+ +++++..+|+.+++++++..+||+|+.|..+++++|
T Consensus       101 ~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~  179 (260)
T PLN03243        101 EYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLG  179 (260)
T ss_pred             HHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence            2222 35678999999999999999999999999999998888 889999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      ++|++|++|||+..|+.+|+++|+.++++.. .........++.++.++.++..
T Consensus       180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g-~~~~~~l~~ad~vi~~~~el~~  232 (260)
T PLN03243        180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDLSV  232 (260)
T ss_pred             CChHHeEEEcCCHHHHHHHHHcCCEEEEEec-CCchhhhccCCEEeCCHHHHHH
Confidence            9999999999999999999999999999874 3222223357788888877643

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.96  E-value=3e-28  Score=202.99  Aligned_cols=207  Identities=26%  Similarity=0.415  Sum_probs=174.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      ++++.|+||+||||+|+...+..++..++++++.. .+........|......+............. +..+.+.+.+..
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   80 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT   80 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence            57899999999999999999999999999999988 6888888888888887776665544333222 344444444444


Q ss_pred             hhcc---CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           86 HLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        86 ~~~~---~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .+..   ..++||+.++|+.|++.|++++++|+.+...++..+ +++|+..+|+.++++++....||+|..+..++++++
T Consensus        81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~  159 (220)
T COG0546          81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG  159 (220)
T ss_pred             HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence            4432   579999999999999999999999999999999888 889999999999998888899999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc--cccccccceeeccccccC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDLR  215 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~s~~ii~~l~e~~  215 (313)
                      ++|++++||||+.+|+.+|+++|+.++.+.++...  ......++.++.++.++.
T Consensus       160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~  214 (220)
T COG0546         160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELL  214 (220)
T ss_pred             CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHH
Confidence            99889999999999999999999999999997632  222446899999988764

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=4.1e-28  Score=197.87  Aligned_cols=185  Identities=28%  Similarity=0.454  Sum_probs=159.1

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      |+.++++|+||+||||+|+...+..++.++++++|...+........|....+.+..++..++...+.+.+.......+.
T Consensus         1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (188)
T PRK10725          1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVK   80 (188)
T ss_pred             CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999887777777788888878788888777766555555554444444


Q ss_pred             hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ... ....++|+ .++|..|++. ++++++||++...+...+ +++++..+|+.+++++++...||+|+.+..+++++++
T Consensus        81 ~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~  157 (188)
T PRK10725         81 SMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGV  157 (188)
T ss_pred             HHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCC
Confidence            332 45678886 5899999876 899999999999998888 8899999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      +|++|++|||+..|+++|+++|++++.+.
T Consensus       158 ~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        158 QPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             CHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            99999999999999999999999999875

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.96  E-value=2.9e-28  Score=203.71  Aligned_cols=205  Identities=24%  Similarity=0.379  Sum_probs=168.4

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHhh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFSDH   86 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   86 (313)
                      +|+|+||+||||+|+.+.+..++.++++++|.+.+...... +.|....+.+..++...+.+.. .+.+...+.+.+...
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA   80 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999998877766655 7788888888887776665421 223334444444443


Q ss_pred             hc--cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc--cccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        87 ~~--~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~--~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      +.  ...++||+.++|+.|++.|++++++||+....+...+ +++++.  .+|+.++++++....||+|+.+..++++++
T Consensus        81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~  159 (220)
T TIGR03351        81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG  159 (220)
T ss_pred             hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence            32  4689999999999999999999999999999999888 788998  999999999999889999999999999999


Q ss_pred             CC-CCcEEEEecCHhhHHHHHHcCCeE-EEeCCCCCcccc--ccccceeecccccc
Q 021360          163 ME-PSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       163 ~~-~~~~i~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +. |++|++|||+..|+.+|+++|+.+ +++..+......  ...++.++.++.++
T Consensus       160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l  215 (220)
T TIGR03351       160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL  215 (220)
T ss_pred             CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence            97 799999999999999999999999 888775433221  23577788877664

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.96  E-value=3.2e-28  Score=202.54  Aligned_cols=201  Identities=23%  Similarity=0.362  Sum_probs=162.4

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++++|+||+||||+|+...+..++.+++++++.. .+.+......|.+..+.+..+    + +...+.+...+...+...
T Consensus         2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~   76 (214)
T PRK13288          2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKI----D-ESKVEEMITTYREFNHEH   76 (214)
T ss_pred             CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhc----C-HHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999998753 566667777787766554432    1 112233333333333322


Q ss_pred             h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        87 ~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      . ....++||+.++|+.|++.|++++++||+....+...+ +.+|+..+|+.+++++++...||+|+.+.++++++++++
T Consensus        77 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~  155 (214)
T PRK13288         77 HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP  155 (214)
T ss_pred             hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence            2 35689999999999999999999999999999998888 889999999999999999999999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +++++|||+.+|+.+|+++|++++++.++......  ...++++++++.++
T Consensus       156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l  206 (214)
T PRK13288        156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL  206 (214)
T ss_pred             HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence            99999999999999999999999999886432221  23577888888765

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.96  E-value=3e-28  Score=204.46  Aligned_cols=207  Identities=22%  Similarity=0.354  Sum_probs=163.8

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      ..|+|+|+||+||||+|+...+..+++.+++++|.+ .+.+......|.+............. ....+++...+.+.+.
T Consensus         9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   87 (229)
T PRK13226          9 VRFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYE   87 (229)
T ss_pred             cccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHH
Confidence            457799999999999999999999999999999975 56666666666655444333222111 1112344444555554


Q ss_pred             hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ... ....++||+.++|+.|++.|++++++||++...+...+ +++++..+|+.++++++....||+|+.+..+++++|+
T Consensus        88 ~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~  166 (229)
T PRK13226         88 ALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGV  166 (229)
T ss_pred             HhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCC
Confidence            433 35789999999999999999999999999988887777 8899999999999998888899999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc---cccccceeecccccc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDL  214 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~---~~~~s~~ii~~l~e~  214 (313)
                      +|++|++|||+.+|+.+|+++|++++.+..+.....   ....++.+++++.++
T Consensus       167 ~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el  220 (229)
T PRK13226        167 APTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL  220 (229)
T ss_pred             ChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence            999999999999999999999999999987653221   123588888888775

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.96  E-value=6.4e-28  Score=200.65  Aligned_cols=202  Identities=22%  Similarity=0.300  Sum_probs=165.9

Q ss_pred             EEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHHHHhhh
Q 021360           12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHL   87 (313)
Q Consensus        12 vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   87 (313)
                      |+||+||||+|+...+..++..+++++|.. .+........|......+..++..++...+..   ++.+.+.+.+....
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA   80 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence            689999999999998899999999999985 56666677778877777777777666554432   23333444444333


Q ss_pred             c-cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           88 C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        88 ~-~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      . ...++||+.++|+.|++.|++++++|+++...++..+ +++++..+|+.+++++++...||+|+.+..++++++++|+
T Consensus        81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~  159 (213)
T TIGR01449        81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ  159 (213)
T ss_pred             cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence            2 4789999999999999999999999999999888888 8899999999999999998999999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +|++|||+.+|+.+|+++|++++++..+......  ...++.++.++.++
T Consensus       160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l  209 (213)
T TIGR01449       160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL  209 (213)
T ss_pred             HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence            9999999999999999999999999875432211  23578888888764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.96  E-value=7.2e-28  Score=211.47  Aligned_cols=207  Identities=25%  Similarity=0.288  Sum_probs=169.1

Q ss_pred             CccEEEEecCCccccChH-HHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      ..++|||||||||+|+.. .+..++.++++++|....... .....|.+..+.+..++.....+...+.+...+.+.+..
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~  209 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA  209 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence            579999999999999976 566799999999998766654 467888888887777655332221223344444555544


Q ss_pred             hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        86 ~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      .. ....++||+.++|+.|++.|++++++|+++...++..+ +++|+..+|+.+++++++...||+|+.|..+++++|++
T Consensus       210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~  288 (381)
T PLN02575        210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI  288 (381)
T ss_pred             HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC
Confidence            43 34689999999999999999999999999999999888 88999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      |++|++|||+..|+++|+++|+.++++....... ....++.+++++.++..
T Consensus       289 Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~-~l~~Ad~iI~s~~EL~~  339 (381)
T PLN02575        289 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIY-ELGAADLVVRRLDELSI  339 (381)
T ss_pred             cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChh-HhcCCCEEECCHHHHHH
Confidence            9999999999999999999999999998743222 22347888999988744

>PF01687 Flavokinase: Riboflavin kinase; InterPro: IPR015865 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=99.96  E-value=1.5e-30  Score=193.29  Aligned_cols=77  Identities=42%  Similarity=0.711  Sum_probs=70.0

Q ss_pred             CCCCccccccceeeeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEee
Q 021360          232 LPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVS  311 (313)
Q Consensus       232 ~lg~p~~~~g~v~~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~  311 (313)
                      |||+||.++|+|+||+++||+ ||||||||.+++. +++|  +.||||+|+.+ ++.+|+||+|||+||||++...+||+
T Consensus         1 LLG~py~i~G~Vv~G~~~Gr~-lGfPTANl~~~~~-~~~p--~~GVYa~~v~~-~~~~~~~v~niG~~PTf~~~~~~vE~   75 (125)
T PF01687_consen    1 LLGRPYSISGTVVHGFGRGRK-LGFPTANLDIPDD-KLLP--KEGVYAVWVRV-DGKWYPGVTNIGYRPTFDGKERTVEV   75 (125)
T ss_dssp             HHTSSEEEEEEEEC-SSCCCC-TTS-EEEEEEHCC-CTCC--CTEEEEEEEEE-TSEEEEEEEEEEEETTTSSCEEEEEE
T ss_pred             CcCCCEEEEEEEEeCCccccc-cCCccccccCCcc-cccc--cCEEEEEEEEE-CCEEEEeEEEecCCCccCcCceeEEE
Confidence            589999999999999999999 9999999999555 8999  78999999999 78899999999999999888899999


Q ss_pred             cC
Q 021360          312 LT  313 (313)
Q Consensus       312 ~~  313 (313)
                      ||
T Consensus        76 hi   77 (125)
T PF01687_consen   76 HI   77 (125)
T ss_dssp             EE
T ss_pred             EE
Confidence            96

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents the riboflavin kinase domains from bacteria and eukaryotes.; GO: 0008531 riboflavin kinase activity, 0009231 riboflavin biosynthetic process; PDB: 1Q9S_A 1NB9_A 1P4M_A 1NB0_A 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A ....

>PRK11587 putative phosphatase; Provisional

Probab=99.96  E-value=1.3e-27  Score=199.21  Aligned_cols=202  Identities=27%  Similarity=0.401  Sum_probs=156.0

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--HH-
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FS-   84 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-   84 (313)
                      ++|+|+||+||||+|+...+..++.++++++|.+. .+......|.+....+..+..    ..+.+.+...+...  +. 
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~   76 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMA----GASEAEIQAEFTRLEQIEA   76 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhc----cCCcHHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999764 222333446666655554432    12233333333321  11 


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      .......++||+.++|+.|+++|++++++||+........+ +..++ .+|+.+++++++...||+|+.+..+++++|++
T Consensus        77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~  154 (218)
T PRK11587         77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA  154 (218)
T ss_pred             hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC
Confidence            12246789999999999999999999999999887776666 66777 45788888888888999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCcc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  217 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~  217 (313)
                      |++|++|||+..|+.+|+++|+.++++..+.... ....++.++.++.++...
T Consensus       155 p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~~~~~el~~~  206 (218)
T PRK11587        155 PQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTP-RLDEVDLVLHSLEQLTVT  206 (218)
T ss_pred             cccEEEEecchhhhHHHHHCCCEEEEECCCCchh-hhccCCEEecchhheeEE
Confidence            9999999999999999999999999998754222 233578888888887543

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.96  E-value=1.8e-27  Score=202.95  Aligned_cols=187  Identities=17%  Similarity=0.247  Sum_probs=149.9

Q ss_pred             ccEEEEecCCccccChH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHH----------HHHHhCCCCCHHH---
Q 021360            9 MSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKHE---   74 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~---   74 (313)
                      +++|+||+||||+|+.. .+..++.++++++|.+.+.+......|.+....+..          +...++...+...   
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEA   81 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHH
Confidence            68999999999999854 346788999999998877777766777665443332          3344554433322   


Q ss_pred             HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCCCCCCChH
Q 021360           75 FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPD  152 (313)
Q Consensus        75 ~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~~~kp~~~  152 (313)
                      +...+.+.+.... ....++||+.++|+.|++.|++++++||++...++..+ +++++..+| +.+++++++...||+|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~  160 (253)
T TIGR01422        82 IYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPW  160 (253)
T ss_pred             HHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHH
Confidence            2223333322222 45789999999999999999999999999999998888 888999986 89999999999999999


Q ss_pred             HHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          153 IFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       153 ~~~~~~~~~~~~-~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      .+..+++++++. |++|++|||+.+|+.+|+++|+.++.+.++..
T Consensus       161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~  205 (253)
T TIGR01422       161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSN  205 (253)
T ss_pred             HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCc
Confidence            999999999995 99999999999999999999999999988653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.96  E-value=2e-27  Score=198.68  Aligned_cols=203  Identities=24%  Similarity=0.376  Sum_probs=163.9

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++++|+||+||||+|+...+..++.++++++|...+.+. .....|......+..+...++.+.+.+++...+.+.+...
T Consensus         3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (221)
T PRK10563          3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARL   82 (221)
T ss_pred             CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            579999999999999999989999999999998876544 3555677778888888888887766666655555444333


Q ss_pred             h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc-eEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        87 ~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~-~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      . ....++||+.++|+.|   +++++++||++...+...+ +++++..+|+ .++++++++..||+|+.|..++++++++
T Consensus        83 ~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~  158 (221)
T PRK10563         83 FDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN  158 (221)
T ss_pred             HHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence            2 4678999999999998   3899999999998888888 8899999995 6888888889999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      |++|++|||+..|+.+|+++|++++++............++.++.++.++
T Consensus       159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l  208 (221)
T PRK10563        159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQL  208 (221)
T ss_pred             HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHH
Confidence            99999999999999999999999998865322221112234456666554

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.96  E-value=4.3e-27  Score=202.05  Aligned_cols=189  Identities=19%  Similarity=0.261  Sum_probs=149.1

Q ss_pred             cCccEEEEecCCccccChHH-HHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHH----------HHHhCCCCCHHH-
Q 021360            7 KLMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKHE-   74 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~~~~~-   74 (313)
                      +++|+|+||+||||+|+... +..++.++++++|.+.+.+......|......+..+          ...++...+... 
T Consensus         2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   81 (267)
T PRK13478          2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADV   81 (267)
T ss_pred             CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHH
Confidence            46899999999999998543 367899999999988777766667776654433332          234454333322 


Q ss_pred             --HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCCCCCCC
Q 021360           75 --FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS  150 (313)
Q Consensus        75 --~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~~~kp~  150 (313)
                        +...+.+.+.... ....++||+.++|+.|++.|++++++||++...+...+ +.+++..+| +.+++++++...||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP~  160 (267)
T PRK13478         82 DALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRPY  160 (267)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCCC
Confidence              2233333333222 35789999999999999999999999999999888777 777877764 899999999899999


Q ss_pred             hHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          151 PDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       151 ~~~~~~~~~~~~~~-~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      |+.+..+++++|+. +++|++|||+.+|+.+|+++|+.++.+..+..
T Consensus       161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~  207 (267)
T PRK13478        161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN  207 (267)
T ss_pred             hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence            99999999999996 69999999999999999999999999988653

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.96  E-value=2.4e-27  Score=198.30  Aligned_cols=206  Identities=21%  Similarity=0.316  Sum_probs=148.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHH---HHHcCCCCChhhhhhhcC-------CCHHHHHHHHHHHhCCCCCHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGREKHKIVG-------KTPLEEAAIIVEDYGLPCAKHEFVN   77 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~   77 (313)
                      |+++|+||+||||+|+...+..++..+   +.++|.+.+.+.......       ..............+.....+....
T Consensus         1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T TIGR02253         1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAA   80 (221)
T ss_pred             CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHH
Confidence            478999999999999988777766654   445666665544422111       1000011112222222212222222


Q ss_pred             HHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHH
Q 021360           78 EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA  157 (313)
Q Consensus        78 ~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~  157 (313)
                      ..............++||+.++|+.|++.|++++++||++...+...+ +++++..+|+.++++++++..||+|+.+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~  159 (221)
T TIGR02253        81 FVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAA  159 (221)
T ss_pred             HHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHH
Confidence            222222323345789999999999999999999999999988888888 8899999999999999999999999999999


Q ss_pred             HHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcc---ccccccceeecccccc
Q 021360          158 AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLDL  214 (313)
Q Consensus       158 ~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~---~~~~~s~~ii~~l~e~  214 (313)
                      ++++|+++++|++|||+. +|+.+|+++|+.++++..+....   .....++.+++++.++
T Consensus       160 ~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el  220 (221)
T TIGR02253       160 LKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL  220 (221)
T ss_pred             HHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence            999999999999999998 89999999999999998754322   1122467777777553

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=8.1e-27  Score=200.17  Aligned_cols=208  Identities=25%  Similarity=0.303  Sum_probs=164.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHH----hCCCC-CHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVED----YGLPC-AKHEFVNEVY   80 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~   80 (313)
                      .++|+|+||+||||+|+.+.+..++..+++++|.... .+......|.+.......++..    .+.+. ..+...+.+.
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   90 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM   90 (272)
T ss_pred             ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999998753 4445566777665555544322    12221 1222233333


Q ss_pred             HHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        81 ~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      +.+........++||+.++|+.|++.|++++++||++...+...+ +++++..+|+.+++++++...||+|+.+..++++
T Consensus        91 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~  169 (272)
T PRK13223         91 EAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM  169 (272)
T ss_pred             HHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence            333333334678999999999999999999999999998888788 7789999999999999988899999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccC
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  215 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~  215 (313)
                      +|+++++|++|||+.+|+.+|+++|++++++..+......  ...++.++.++.++.
T Consensus       170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~  226 (272)
T PRK13223        170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALL  226 (272)
T ss_pred             hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHH
Confidence            9999999999999999999999999999999875433222  236888998888764

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.95  E-value=1.3e-26  Score=188.41  Aligned_cols=179  Identities=30%  Similarity=0.439  Sum_probs=150.6

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHHHhhh
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMFSDHL   87 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   87 (313)
                      +|+||+||||+|+...+..++.++++.+|.+.+........|....+.+..++...+...+.+..   ...+.+.+...+
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL   80 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999988777777778888888888888888776554332   233333333322


Q ss_pred             ---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           88 ---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        88 ---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                         ....++||+.++|+.|++.|++++++|++..  ....+ +++++..+|+.++++++....||+|+.|+.++++++++
T Consensus        81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~  157 (185)
T TIGR01990        81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS  157 (185)
T ss_pred             HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence               2357899999999999999999999998753  34456 88999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      +++|++|||+.+|+.+|+++|++++.|.
T Consensus       158 ~~~~v~vgD~~~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       158 PSECIGIEDAQAGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             HHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence            9999999999999999999999998873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=5.6e-26  Score=190.67  Aligned_cols=208  Identities=22%  Similarity=0.306  Sum_probs=168.0

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSM   82 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   82 (313)
                      +++++|+||+||||+|+.+.+..++..++++++.+ .+........|......+...+...+...+..+.   ...+.+.
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDRH   83 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHHH
Confidence            56899999999999999888888999999999876 4555666777777777776666654443333322   2333343


Q ss_pred             HHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           83 FSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        83 ~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      +.... ....++||+.++++.+++.|++++++|++....++..+ +++++..+|+.+++++++...||+|+.++.+++++
T Consensus        84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~  162 (226)
T PRK13222         84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL  162 (226)
T ss_pred             HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence            44333 25789999999999999999999999999999888888 88899999999999999889999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc--cccccceeeccccccC
Q 021360          162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLR  215 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~s~~ii~~l~e~~  215 (313)
                      ++++++|++|||+.+|+.+|+++|+.++++..+.....  ....++++++++.++.
T Consensus       163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~  218 (226)
T PRK13222        163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELL  218 (226)
T ss_pred             CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHH
Confidence            99999999999999999999999999999987543221  1235788888887753

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.95  E-value=2.8e-26  Score=186.54  Aligned_cols=180  Identities=30%  Similarity=0.497  Sum_probs=151.0

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSD   85 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   85 (313)
                      +++|+||+||||+|+...+..++.++++++|..++........|......+..++..++...+.+.   +.....+.+..
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE   80 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999988775555667777778888888887754444333   23333444444


Q ss_pred             hh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           86 HL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        86 ~~--~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ..  ....++||+.++|+.|++.|++++++|++  ..++..+ +++++..+|+.++++++....||+|+.+..+++++++
T Consensus        81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  157 (185)
T TIGR02009        81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGV  157 (185)
T ss_pred             HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCC
Confidence            33  34789999999999999999999999988  5566677 8899999999999999998999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +++++++|||+..|+.+|+++|++++.|
T Consensus       158 ~~~~~v~IgD~~~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       158 SPNECVVFEDALAGVQAARAAGMFAVAV  185 (185)
T ss_pred             CHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence            9999999999999999999999998764

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.95  E-value=7.5e-26  Score=184.39  Aligned_cols=213  Identities=38%  Similarity=0.591  Sum_probs=188.2

Q ss_pred             ccccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         4 ~~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      .+...+.+++||+||||+|++..+.+++..++.++|..++.....+..|....+..+.++..+..+.+.+++..+..+..
T Consensus         5 ~~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~   84 (222)
T KOG2914|consen    5 SLSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEIL   84 (222)
T ss_pred             ccccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEe--cCCCCCCCCChHHHHHHHHHc
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~--~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      ...+....+.||+.++++.|+..|++++++|++++...+..+..+.++...|+.++.  +.++..+||+|+.|..+++++
T Consensus        85 ~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l  164 (222)
T KOG2914|consen   85 DRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRL  164 (222)
T ss_pred             HHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhc
Confidence            999999999999999999999999999999999998888888444447788888887  667889999999999999999


Q ss_pred             CCCC-CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          162 NMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       162 ~~~~-~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      |.++ +.|++|+|++.++++|+++|+++++++...........++.+++++.+..+
T Consensus       165 ~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~~  220 (222)
T KOG2914|consen  165 GVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFKP  220 (222)
T ss_pred             CCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccCc
Confidence            9999 999999999999999999999999999843333334467777777766543

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.95  E-value=4.9e-26  Score=188.12  Aligned_cols=195  Identities=25%  Similarity=0.334  Sum_probs=154.9

Q ss_pred             EEEecCCccccChHHHHHHHHHHHHHc-CCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 021360           12 VILDLDGTLLNTDGMFSEVLKTFLVKY-GKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK   89 (313)
Q Consensus        12 vifDlDGTL~d~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (313)
                      |+|||||||+|+...+.++++++++++ +.+ .+.+.+.+..|......+    +..+.+....   .............
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~   73 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIM----RIMGLPLEME---EPFVRESYRLAGE   73 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHH----HHcCCCHHHH---HHHHHHHHHhhcc
Confidence            689999999999999999999999874 653 456666677776654443    3344432111   1111112222356


Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      ..++||+.++|+.|++.|++++++||+....+...+ +++++..+|+.++++++....||+++.+..+++++++++++|+
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l  152 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV  152 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence            889999999999999999999999999999988888 8899999999999999988899999999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +|||+.+|+.+|+++|++++.+.++......  ...++.++.++.++
T Consensus       153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l  199 (205)
T TIGR01454       153 MVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL  199 (205)
T ss_pred             EEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence            9999999999999999999999876543322  23577888877664

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PLN02811 hydrolase

Probab=99.95  E-value=6.9e-26  Score=189.09  Aligned_cols=206  Identities=41%  Similarity=0.700  Sum_probs=166.0

Q ss_pred             cCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhccCCCC
Q 021360           16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKAL   93 (313)
Q Consensus        16 lDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   93 (313)
                      +||||+|+...+..+|.++++++|...+.+......|......+..++...+.+.  ..+.+.......+........++
T Consensus         1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   80 (220)
T PLN02811          1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM   80 (220)
T ss_pred             CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence            6999999999999999999999999877776777888888887788887777652  33444444444444444567899


Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC--CCCCCCCChHHHHHHHHHcC---CCCCcE
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSS  168 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~--~~~~~kp~~~~~~~~~~~~~---~~~~~~  168 (313)
                      ||+.++|+.|++.|++++++|++....+...+.+..++.++|+.+++++  ++...||+|+.+..++++++   ++|++|
T Consensus        81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~  160 (220)
T PLN02811         81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV  160 (220)
T ss_pred             ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence            9999999999999999999999987665544435567888999999999  88889999999999999996   999999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCC
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL  221 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~  221 (313)
                      ++|||+..|+.+|+++|++++.+..+.........++.++.++.++....+++
T Consensus       161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~~~~~  213 (220)
T PLN02811        161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPEEWGL  213 (220)
T ss_pred             EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHHHcCC
Confidence            99999999999999999999999775433223336788899998876554433

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.95  E-value=5e-26  Score=194.52  Aligned_cols=201  Identities=19%  Similarity=0.305  Sum_probs=160.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS   84 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   84 (313)
                      +++++++||+||||+|+.+.+..+++++++++|.. .+.+......+......    ++.++.+. ..+++...+.+.+.
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i----~~~~~~~~~~~~~~~~~~~~~~~  135 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTI----VRRAGLSPWQQARLLQRVQRQLG  135 (273)
T ss_pred             hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHH----HHHcCCCHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999976 55555666666554433    34444431 22334445555555


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      ......+++||+.++|+.|++.|++++++|++....+...+ +++|+..+|+.++++++..   ++++.+..++++++++
T Consensus       136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~~---~k~~~~~~~l~~~~~~  211 (273)
T PRK13225        136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPIL---SKRRALSQLVAREGWQ  211 (273)
T ss_pred             hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCCC---CCHHHHHHHHHHhCcC
Confidence            44556789999999999999999999999999999999888 8899999999988876642   4568899999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccC
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  215 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~  215 (313)
                      |++|++|||+..|+.+|+++|+.++++..+......  ...++.+++++.++.
T Consensus       212 p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~  264 (273)
T PRK13225        212 PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLL  264 (273)
T ss_pred             hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHH
Confidence            999999999999999999999999999886543321  235889999887763

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.94  E-value=2.8e-25  Score=186.19  Aligned_cols=201  Identities=20%  Similarity=0.268  Sum_probs=151.3

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhc------------CC-CHH----HHHHHHHHHhCCCCC
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GK-TPL----EEAAIIVEDYGLPCA   71 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------g~-~~~----~~~~~~~~~~~~~~~   71 (313)
                      +|+|+||+||||+|+......++.++++++|...+......+.            +. ...    ..+..+++..+....
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD   80 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence            5899999999999999998888999999888776543322111            11 111    112233444444322


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCCh
Q 021360           72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      .+.+...+.+..   .....++||+.++|+.+++. ++++++||+....+...+ +.+++..+|+.++++++.+..||+|
T Consensus        81 ~~~~~~~~~~~~---~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~~  155 (224)
T TIGR02254        81 EALLNQKYLRFL---EEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPDK  155 (224)
T ss_pred             HHHHHHHHHHHH---hccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCCH
Confidence            222222222221   13468999999999999999 999999999999888777 8899999999999999999999999


Q ss_pred             HHHHHHHHHc-CCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          152 DIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       152 ~~~~~~~~~~-~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +.+..+++++ +++|++|++|||+. +|+.+|+++|++++++.++.........++.++.++.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el  220 (224)
T TIGR02254       156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL  220 (224)
T ss_pred             HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence            9999999999 99999999999998 799999999999999987433222223466777777664

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.94  E-value=2e-25  Score=183.49  Aligned_cols=179  Identities=18%  Similarity=0.329  Sum_probs=135.9

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChh-------h-h-hhhcCC--C----HHHHHHHHHHHhCCCCCHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-------E-K-HKIVGK--T----PLEEAAIIVEDYGLPCAKH   73 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-------~-~-~~~~g~--~----~~~~~~~~~~~~~~~~~~~   73 (313)
                      +|+|+||+||||+|+... ...+.+.+...+......       . . ....|.  .    ....+..++..++...+..
T Consensus         1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~   79 (198)
T TIGR01428         1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDES   79 (198)
T ss_pred             CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHH
Confidence            478999999999999865 334444432222111100       0 0 111121  1    1244566677777764332


Q ss_pred             HHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHH
Q 021360           74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI  153 (313)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~  153 (313)
                      . .+.    +.+.+....++||+.++|+.|++.|++++++||++...+...+ +++|+..+|+.++++++++..||+|+.
T Consensus        80 ~-~~~----~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~  153 (198)
T TIGR01428        80 A-ADR----LAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQV  153 (198)
T ss_pred             H-HHH----HHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHH
Confidence            2 222    2333356789999999999999999999999999999998888 889999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      |..+++++|++|++|++|||+..|+.+|+++|++++++++.
T Consensus       154 ~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~  194 (198)
T TIGR01428       154 YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP  194 (198)
T ss_pred             HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence            99999999999999999999999999999999999999873

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.94  E-value=4.1e-25  Score=185.16  Aligned_cols=197  Identities=22%  Similarity=0.338  Sum_probs=143.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh--cCCC-----------HHHH----HHHHHHHhCCCC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGKT-----------PLEE----AAIIVEDYGLPC   70 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~g~~-----------~~~~----~~~~~~~~~~~~   70 (313)
                      ++|+|+||+||||+|..  ...++.++++++|...+.+....+  .+..           ..+.    +..+...++.+ 
T Consensus         2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (224)
T PRK09449          2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVT-   78 (224)
T ss_pred             CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCC-
Confidence            58999999999999854  346778888888877655443322  1111           1000    11222333321 


Q ss_pred             CHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCC
Q 021360           71 AKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP  149 (313)
Q Consensus        71 ~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp  149 (313)
                       ...+.    +.+...+ ....++||+.++|+.|+ .|++++++||+........+ +++|+..+|+.++++++.+..||
T Consensus        79 -~~~~~----~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP  151 (224)
T PRK09449         79 -PGELN----SAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKP  151 (224)
T ss_pred             -HHHHH----HHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCC
Confidence             12222    2222222 34679999999999999 57999999999999888888 88999999999999999999999


Q ss_pred             ChHHHHHHHHHcCCC-CCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          150 SPDIFLEAAKRLNME-PSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~-~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +|+.|..+++++|+. +++|++|||+. +|+.+|+++|+.++++.+..........++.++.++.++
T Consensus       152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el  218 (224)
T PRK09449        152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL  218 (224)
T ss_pred             CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence            999999999999985 48999999998 699999999999999985322211122467788877765

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.94  E-value=1.1e-24  Score=188.19  Aligned_cols=209  Identities=26%  Similarity=0.404  Sum_probs=152.0

Q ss_pred             cCccEEEEecCCccccCh-HHHHHHHHHHHHHcCC-CC--Chhhhhh--hcCCCHHHHHHHHHHHhCCC--------CCH
Q 021360            7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGK-EW--DGREKHK--IVGKTPLEEAAIIVEDYGLP--------CAK   72 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~-~~~~~~~~~~~~~~g~-~~--~~~~~~~--~~g~~~~~~~~~~~~~~~~~--------~~~   72 (313)
                      ..+++|+|||||||+|+. ..+..++.++++++|. ..  +.+.+..  ..|.+....... +...+.+        .+.
T Consensus        38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~  116 (286)
T PLN02779         38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWY-FNENGWPTSTIEKAPKDE  116 (286)
T ss_pred             cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHH-HHHcCCCccccccCCccc
Confidence            457999999999999999 9999999999999998 32  3332221  144444333322 2222222        111


Q ss_pred             ---HHHHH----HHHHHHHhhhc--cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcC---CccccceEEe
Q 021360           73 ---HEFVN----EVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVG  140 (313)
Q Consensus        73 ---~~~~~----~~~~~~~~~~~--~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~---~~~~f~~v~~  140 (313)
                         ++...    ...+.+...+.  .+.++||+.++|+.|++.|++++++||++...+...+ +...   ....|+.+ +
T Consensus       117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~  194 (286)
T PLN02779        117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-A  194 (286)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-e
Confidence               11112    22233333332  3589999999999999999999999999999888777 5443   23334444 7


Q ss_pred             cCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccc
Q 021360          141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK  218 (313)
Q Consensus       141 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~  218 (313)
                      ++++...||+|+.|..++++++++|++|++|||+.+|+.+|+++|+.++.+..+.........++.+++++.++....
T Consensus       195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~  272 (286)
T PLN02779        195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLED  272 (286)
T ss_pred             ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhh
Confidence            788888999999999999999999999999999999999999999999999876543333346888899988876544

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.94  E-value=4.1e-25  Score=203.40  Aligned_cols=203  Identities=16%  Similarity=0.215  Sum_probs=160.0

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcC------CCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY   80 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (313)
                      +|+++|+||+||||+|+...+..++.+++++++      ...+.+.+....|.+..+.+..+....+.. ..++....+.
T Consensus       239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~~~~~~  317 (459)
T PRK06698        239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQTDAYFL  317 (459)
T ss_pred             HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHHHHHHH
Confidence            467999999999999999999999999998874      223445667778888888777776554332 1122223333


Q ss_pred             HHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHH
Q 021360           81 SMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        81 ~~~~~~~--~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      +.+....  ...+++||+.++|+.|++.|++++++|+++...+...+ +++++..+|+.+++++++. .+|+|+.+..++
T Consensus       318 ~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al  395 (459)
T PRK06698        318 ERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSIL  395 (459)
T ss_pred             HHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHHH
Confidence            3333322  35689999999999999999999999999999999888 8899999999999998874 467788999998


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +++  ++++|++|||+.+|+.+|+++|+.++++.++.........++.++.++.++
T Consensus       396 ~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el  449 (459)
T PRK06698        396 NKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL  449 (459)
T ss_pred             Hhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence            875  578999999999999999999999999988543333334578888888765

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.93  E-value=1.5e-24  Score=215.24  Aligned_cols=209  Identities=24%  Similarity=0.361  Sum_probs=173.8

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   85 (313)
                      +++++|+|||||||+|+...+..++.++++++|.+++.+.+....|....+.+..+...+++. .+.++..+.+.+.+.+
T Consensus        73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  152 (1057)
T PLN02919         73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE  152 (1057)
T ss_pred             CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999988887788888888777776666666553 3444444444444443


Q ss_pred             hhc---cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc-cccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           86 HLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        86 ~~~---~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      .+.   ...++||+.++|+.|+++|++++++||+....++..+ +++++. .+|+.+++++++...||+|+.|..+++++
T Consensus       153 ~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l  231 (1057)
T PLN02919        153 KYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL  231 (1057)
T ss_pred             HhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence            331   2347999999999999999999999999999998888 888996 78999999999999999999999999999


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-ccccceeeccccccCc
Q 021360          162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRP  216 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~s~~ii~~l~e~~~  216 (313)
                      +++|++|++|||+..|+++|+++|++++++..+...... ...++.+++++.++..
T Consensus       232 gv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~  287 (1057)
T PLN02919        232 GVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISL  287 (1057)
T ss_pred             CcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCH
Confidence            999999999999999999999999999999886433222 3467889999987643

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.93  E-value=1e-24  Score=179.97  Aligned_cols=178  Identities=28%  Similarity=0.354  Sum_probs=137.4

Q ss_pred             cEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh------------------cCCCHH----HHHHHHHHHhC
Q 021360           10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPL----EEAAIIVEDYG   67 (313)
Q Consensus        10 k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~g~~~~----~~~~~~~~~~~   67 (313)
                      |+|+||+||||+|+...+..++.++++++|...+.......                  .|....    ..+...+...+
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~   80 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG   80 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999988765432110                  133332    22344444444


Q ss_pred             CCCCHHHHHHHHHHHHHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC
Q 021360           68 LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR  145 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~  145 (313)
                      .. +.+.+.....+.+....  ....++||+.++|+.|++.|++++++||++.. +...+ +++++..+|+.++++++++
T Consensus        81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l-~~~~l~~~fd~i~~s~~~~  157 (203)
T TIGR02252        81 VP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLL-EALGLLEYFDFVVTSYEVG  157 (203)
T ss_pred             CC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHH-HHCCcHHhcceEEeecccC
Confidence            32 22233333333332221  24578999999999999999999999998865 45666 8889999999999999999


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEE
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA  190 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~  190 (313)
                      ..||+|+.+..+++++|++|++|++|||+. +|+.+|+++|+.+++
T Consensus       158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            999999999999999999999999999998 899999999998864

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.93  E-value=2.6e-25  Score=178.79  Aligned_cols=175  Identities=31%  Similarity=0.531  Sum_probs=147.4

Q ss_pred             EEEecCCccccChHHHHHHHHH-HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 021360           12 VILDLDGTLLNTDGMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV   90 (313)
Q Consensus        12 vifDlDGTL~d~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (313)
                      |+||+||||+|+...+.+++.. +.+.++.+.+........+....+.+..++...+..  .....+.+.+.  ......
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~   76 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKL   76 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGE
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhcc
Confidence            7999999999999888888887 477888776666667777777777788887777543  22222222222  113678


Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      .++|++.++|+.|++.|++++++||.+...+...+ +++++..+|+.++++++.+..||+++.|+.++++++++|++|++
T Consensus        77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~  155 (176)
T PF13419_consen   77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF  155 (176)
T ss_dssp             EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred             chhhhhhhhhhhcccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence            99999999999999999999999999999998888 88999999999999999999999999999999999999999999


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      |||+..|+.+|+++|+.+++|
T Consensus       156 vgD~~~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  156 VGDSPSDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             EESSHHHHHHHHHTTSEEEEE
T ss_pred             EeCCHHHHHHHHHcCCeEEeC
Confidence            999999999999999999875

...

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.93  E-value=2.1e-24  Score=180.13  Aligned_cols=107  Identities=15%  Similarity=0.232  Sum_probs=98.9

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ....++||+.++|+.|+++|++++++||++...+...+ +++++..+|+.++++++++..||+|+.|..+++++|++|++
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~  168 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER  168 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence            56789999999999999999999999999999888888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCeE-EEeCCCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEV-VAVPSLP  195 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~-i~v~~~~  195 (313)
                      |++|||+..|+.+|+++|+.+ +.+..+.
T Consensus       169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~  197 (224)
T PRK14988        169 TLFIDDSEPILDAAAQFGIRYCLGVTNPD  197 (224)
T ss_pred             EEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence            999999999999999999984 5565533

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.92  E-value=3.7e-24  Score=180.61  Aligned_cols=202  Identities=16%  Similarity=0.195  Sum_probs=144.6

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCC------CChhhhh---hhcCC-----------CHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE------WDGREKH---KIVGK-----------TPLEEAAIIVED   65 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~------~~~~~~~---~~~g~-----------~~~~~~~~~~~~   65 (313)
                      ..++|+|+||+||||+|+...+..+++++++.++..      +......   ...+.           .....+..+++.
T Consensus         7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   86 (238)
T PRK10748          7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD   86 (238)
T ss_pred             CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence            346799999999999999998888888777654211      1111111   10000           012334556677


Q ss_pred             hCCCCCHHH-HHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           66 YGLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        66 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      ++.+.+..+ ........+........++||+.++|+.|++. ++++++||++..     + +..|+..+|+.+++++++
T Consensus        87 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~  159 (238)
T PRK10748         87 AGLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPH  159 (238)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhceeEecccC
Confidence            776532211 11222223333334578999999999999876 999999998765     3 668999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCc----cccccccceeecccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQ----THRYTAADEVINSLLDL  214 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~----~~~~~~s~~ii~~l~e~  214 (313)
                      +..||+|+.|..+++++|++|++|++|||+ ..|+.+|+++|++++++......    ......++..+.+|.|+
T Consensus       160 ~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el  234 (238)
T PRK10748        160 GRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL  234 (238)
T ss_pred             CcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence            999999999999999999999999999999 59999999999999999874321    11113477778887765

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.91  E-value=3.6e-23  Score=169.82  Aligned_cols=173  Identities=16%  Similarity=0.231  Sum_probs=133.3

Q ss_pred             cEEEEecCCccccChHHHHHHHHHHHHHcC-CCCChhhhhhhcCCCHH--------HHHHHHHHHhC-----CCCCHHHH
Q 021360           10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPL--------EEAAIIVEDYG-----LPCAKHEF   75 (313)
Q Consensus        10 k~vifDlDGTL~d~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~-----~~~~~~~~   75 (313)
                      ++|+|||||||+|+...+..++..++++++ ...+.+....+.|.+..        ......+....     .....+.+
T Consensus         1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (197)
T TIGR01548         1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV   80 (197)
T ss_pred             CceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence            379999999999999999999999999997 66776766666654321        11112222111     12233444


Q ss_pred             HHHHHHHHHhhh----------ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC
Q 021360           76 VNEVYSMFSDHL----------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR  145 (313)
Q Consensus        76 ~~~~~~~~~~~~----------~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~  145 (313)
                      ...+.+.+....          ....+.+++.++|+.|++.|++++++||++...++..+ +++|+..+|+.++++++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~  159 (197)
T TIGR01548        81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCP  159 (197)
T ss_pred             HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCC
Confidence            445555444311          12234556699999999999999999999999999888 8899999999999999887


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      . ||+|+.+..+++++|+++++|++|||+.+|+.+|+++
T Consensus       160 ~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a  197 (197)
T TIGR01548       160 P-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA  197 (197)
T ss_pred             C-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence            6 9999999999999999999999999999999999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.91  E-value=7.8e-23  Score=165.86  Aligned_cols=175  Identities=30%  Similarity=0.435  Sum_probs=125.4

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHH------HHHHHH
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE------VYSMFS   84 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   84 (313)
                      +++||+||||+++++.+.... .  ................ .........+...++...........      ....+.
T Consensus         1 ~vlFDlDgtLv~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (183)
T TIGR01509         1 AILFDLDGVLVDTSSAIEKLV-N--REEFPLVPDELGVSAV-GKLELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYD   76 (183)
T ss_pred             CeeeccCCceechHHHHHHHH-H--HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHH
Confidence            489999999999988765521 1  1222222222221111 11222223333334444433332222      222333


Q ss_pred             hhhcc--CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           85 DHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        85 ~~~~~--~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .....  .+++||+.++|+.|++.|++++++||++... ...+ .++++..+|+.++++++++..||+|+.++.++++++
T Consensus        77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~  154 (183)
T TIGR01509        77 AILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG  154 (183)
T ss_pred             HHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC
Confidence            32333  6899999999999999999999999999887 5444 558999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      ++|++|++|||+..|+.+|+++|+.++++
T Consensus       155 ~~~~~~~~vgD~~~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       155 LKPEECLFVDDSPAGIEAAKAAGMHTVLV  183 (183)
T ss_pred             CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence            99999999999999999999999998864

HAD subfamilies caused by an overly broad single model.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.90  E-value=6e-23  Score=170.41  Aligned_cols=179  Identities=22%  Similarity=0.263  Sum_probs=123.4

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHH--------------HHHHHHHHHhCCCCCHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPL--------------EEAAIIVEDYGLPCAKHE   74 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~~~~~~~   74 (313)
                      +|+|+||+||||+|+.. ....|.......|.+ .........+....              +....+.+.++.....+.
T Consensus         2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   79 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGHDV   79 (211)
T ss_pred             ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCCCc
Confidence            57999999999999976 555555544334432 12112222232211              112222222222111111


Q ss_pred             HHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHH--HHHHHHhhcCCccccceEEecCCCCCCCCCh
Q 021360           75 FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        75 ~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~--~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      ....+   +.... ....++||+.++|+.|++.|++++++||+....  ....+ ...++..+|+.++++++.+..||+|
T Consensus        80 ~~~~~---~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p  155 (211)
T TIGR02247        80 RIAPV---FPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDP  155 (211)
T ss_pred             Cchhh---HHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCH
Confidence            11111   11111 246789999999999999999999999986543  22223 4467888999999999988899999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +.|..+++++|++|++|++|||+..|+.+|+++|+.++.+.+
T Consensus       156 ~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~  197 (211)
T TIGR02247       156 RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD  197 (211)
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            999999999999999999999999999999999999999876

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.90  E-value=1.3e-22  Score=166.67  Aligned_cols=178  Identities=16%  Similarity=0.168  Sum_probs=131.3

Q ss_pred             EEEEecCCccccChHHH-HHHHHHH----HHHcC--CCCChhhhhhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360           11 CVILDLDGTLLNTDGMF-SEVLKTF----LVKYG--KEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~-~~~~~~~----~~~~g--~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      +|+||+||||++.+... ...+...    ...+.  ............| ....+....+.+.++.+.+.+.+...+.+.
T Consensus         2 ~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (199)
T PRK09456          2 LYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQAV   81 (199)
T ss_pred             EEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence            79999999999985421 1112111    00110  0000111112233 455666777888888766555544444332


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      +      ..++||+.++|+.|++.|++++++||++.......+....++..+|+.++++++++..||+|+.|+.+++++|
T Consensus        82 ~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~  155 (199)
T PRK09456         82 F------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEG  155 (199)
T ss_pred             H------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcC
Confidence            2      3589999999999999999999999999887665553345788899999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++|++|++|||+..|+.+|+++|+.++++...
T Consensus       156 ~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        156 FSAADAVFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             CChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence            99999999999999999999999999998773

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.90  E-value=1.2e-22  Score=165.04  Aligned_cols=170  Identities=22%  Similarity=0.257  Sum_probs=125.0

Q ss_pred             cEEEEecCCccccChHHHHHHHHHHHH-----HcCCCCChhh-hh----hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 021360           10 SCVILDLDGTLLNTDGMFSEVLKTFLV-----KYGKEWDGRE-KH----KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV   79 (313)
Q Consensus        10 k~vifDlDGTL~d~~~~~~~~~~~~~~-----~~g~~~~~~~-~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (313)
                      ++|+||+||||+|+...+..++.+.+.     ++|++..... ..    ...|...    ..++....  .+.+.+...+
T Consensus         1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~----~~~~~~~~--~~~~~~~~~~   74 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTL----AGLMILHE--IDADEYLRYV   74 (184)
T ss_pred             CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHH----HHHHHhhC--CCHHHHHHHH
Confidence            479999999999998777777776543     4454432111 11    1122221    12222222  2233332222


Q ss_pred             HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCC----CCCChHHHH
Q 021360           80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFL  155 (313)
Q Consensus        80 ~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~----~kp~~~~~~  155 (313)
                      .+.  .......++||+.++|+.|+   ++++++||++...+...+ +++|+..+|+.++++++.+.    .||+|+.+.
T Consensus        75 ~~~--~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~  148 (184)
T TIGR01993        75 HGR--LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE  148 (184)
T ss_pred             hcc--CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence            221  11235679999999999997   579999999999998888 88999999999999998876    599999999


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       156 ~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .+++++|++|++|++|||+..|+.+|+++|+++++|
T Consensus       149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV  184 (184)
T ss_pred             HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence            999999999999999999999999999999998865

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism]

Probab=99.89  E-value=1.1e-23  Score=151.32  Aligned_cols=85  Identities=49%  Similarity=0.922  Sum_probs=72.9

Q ss_pred             cCCCCCCccccccceeeeecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcce
Q 021360          229 EGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  308 (313)
Q Consensus       229 a~~~lg~p~~~~g~v~~g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~  308 (313)
                      ++.+.-.||...|+||+|++||+++||+||||+.......++-.+..|||.+|+.+..+..|++|+||||||.|.|+.+|
T Consensus         5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~GvYfG~A~v~~~~v~kMvmSIGwNP~Y~N~~Kt   84 (153)
T KOG3110|consen    5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGVYFGWAHVDKGDVFKMVMSIGWNPYYKNKKKT   84 (153)
T ss_pred             cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCceEEEeeeecCCCceeEEEEcccCcccCCcccc
Confidence            44556679999999999999999999999999987654344434457999999999657799999999999999999999


Q ss_pred             EeecC
Q 021360          309 IVSLT  313 (313)
Q Consensus       309 ~e~~~  313 (313)
                      +|+||
T Consensus        85 ~E~hl   89 (153)
T KOG3110|consen   85 MELHL   89 (153)
T ss_pred             eeeee
Confidence            99996

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.89  E-value=1.2e-21  Score=164.60  Aligned_cols=124  Identities=28%  Similarity=0.405  Sum_probs=108.7

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ..+++|++.+.|+.++.. ++++++||+........+ +++|+.++||.++++++++..||+|++|+.+++++|++|++|
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~  174 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA  174 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence            478999999999999999 999999999888888888 888999999999999999999999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCeEEEeCCCCCcc-ccccccceeecccccc
Q 021360          169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL  214 (313)
Q Consensus       169 i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~-~~~~~s~~ii~~l~e~  214 (313)
                      ++|||+. +|+.+|+++||++++++...... .....++..+.++.++
T Consensus       175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l  222 (229)
T COG1011         175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL  222 (229)
T ss_pred             EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence            9999999 68899999999999998854321 1113577777777664

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.88  E-value=2.6e-21  Score=152.52  Aligned_cols=154  Identities=25%  Similarity=0.405  Sum_probs=120.5

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV   90 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (313)
                      +|+||+||||+|+...+..++.+++++++.  +.+.+....|...... .....             .+.+ +.......
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~~-------------~~~~-~~~~~~~~   63 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIAT-------------SFEE-LLGYDAEE   63 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHHH-------------HHHH-HhCcchhh
Confidence            489999999999999999999999999875  3333333333322211 11111             1111 11112345


Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ..+||+.++|+.|++.|++++++|+++...+...+ +++ +..+|+.++++++.. .||+|+.+..+++++++++ +|++
T Consensus        64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~  139 (154)
T TIGR01549        64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH  139 (154)
T ss_pred             eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence            67799999999999999999999999999988877 655 788899999998887 9999999999999999999 9999


Q ss_pred             EecCHhhHHHHHHcC
Q 021360          171 IEDSVIGVVAGKAAG  185 (313)
Q Consensus       171 vgD~~~Di~~a~~~G  185 (313)
                      |||+..|+.+|+++|
T Consensus       140 iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       140 VGDNLNDIEGARNAG  154 (154)
T ss_pred             EeCCHHHHHHHHHcc
Confidence            999999999999987

HAD subfamilies caused by an overly broad single model.

>PHA02597 30

Probab=99.88  E-value=1.1e-21  Score=161.12  Aligned_cols=187  Identities=14%  Similarity=0.167  Sum_probs=126.1

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-h
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   86 (313)
                      |+|+|+||+||||+|+..    .+.++++++|.+.  +......+.........   .++.  +.......+...... .
T Consensus         1 m~k~viFDlDGTLiD~~~----~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~   69 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQS----GLPYFAQKYNIPT--DHILKMIQDERFRDPGE---LFGC--DQELAKKLIEKYNNSDF   69 (197)
T ss_pred             CCcEEEEecCCceEchhh----ccHHHHHhcCCCH--HHHHHHHhHhhhcCHHH---Hhcc--cHHHHHHHhhhhhHHHH
Confidence            478999999999999543    4567777888643  34444434322222212   1221  222222222222212 2


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc----ccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~----~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .....++||+.++|+.|++. ++++++|+.+.......+ +.+++..    +|+.++++++   .+|+|+.+..+++++|
T Consensus        70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~  144 (197)
T PHA02597         70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG  144 (197)
T ss_pred             HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC
Confidence            24577999999999999987 578888887665544344 5666654    4567777665   3667899999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHc--CCeEEEeCCCCCccccccccceeecccccc
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~--G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                        ++++++|||+..|+.+|+++  |++++.+.++..  .......+++.++.|+
T Consensus       145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~  194 (197)
T PHA02597        145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI  194 (197)
T ss_pred             --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence              88999999999999999999  999999988654  2223456777777664

2 hypothetical protein; Provisional

>PRK07143 hypothetical protein; Provisional

Probab=99.88  E-value=4.6e-22  Score=168.41  Aligned_cols=103  Identities=13%  Similarity=-0.002  Sum_probs=84.4

Q ss_pred             hHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccccccceeeeecCCCcccCc
Q 021360          177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGI  256 (313)
Q Consensus       177 Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~~g~~~g~~~lg~  256 (313)
                      |+...++.+-.+..++... ......||+.|++.|.+|+++.          |+.+|||||.++|+|+||          
T Consensus       126 ~~~~L~~~~~~v~~v~~~~-~~g~~ISST~IR~~l~~G~i~~----------A~~lLGr~y~i~G~V~~G----------  184 (279)
T PRK07143        126 NADDLKEYFPNVHIVEILK-INQQKISTSLLKEFIEFGDIEL----------LNSLLLYNYSISITINKN----------  184 (279)
T ss_pred             CHHHHHHhCCcEEEeCCEE-cCCcEEcHHHHHHHHHcCCHHH----------HHHHcCCCcEEEEEEECC----------
Confidence            4555555532345555532 3344568899999999999999          999999999999999988          


Q ss_pred             cccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          257 PTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       257 ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                        |||.+++. +++|  +.||||+++.+ ++.+|+||+|||.|||       +|+||
T Consensus       185 --aNl~~~~~-~~~P--~~GVYa~~v~~-~~~~y~~v~niG~~PT-------iE~hi  228 (279)
T PRK07143        185 --FEFTYPQN-IIKL--HAGIYLAYVVI-NNFKYHGILKINFNNK-------NKIKF  228 (279)
T ss_pred             --eEeCCCcC-cCCC--CCcEEEEEEEE-CCEEEEEEEEecCCce-------EEEEE
Confidence              99998875 7889  79999999998 7788999999999999       89986

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.87  E-value=5.4e-22  Score=159.84  Aligned_cols=161  Identities=18%  Similarity=0.291  Sum_probs=123.7

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCC---CC-----hhhhhhhcCC--CHHH----HHHHHHHHhCCCCCHHHHH
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE---WD-----GREKHKIVGK--TPLE----EAAIIVEDYGLPCAKHEFV   76 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~-----~~~~~~~~g~--~~~~----~~~~~~~~~~~~~~~~~~~   76 (313)
                      +|+||+||||+|+...+..++..+++..+..   ++     ........+.  ...+    .+..+.+.++.+.+.+ . 
T Consensus         1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-   78 (175)
T TIGR01493         1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-Y-   78 (175)
T ss_pred             CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-H-
Confidence            4899999999999998888888877664421   11     1111222221  1112    5667777787765443 1 


Q ss_pred             HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHH
Q 021360           77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        77 ~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~  156 (313)
                         .+.+...+....++||+.++|+       +++++||++...+...+ +++++..+|+.++++++++..||+|+.|..
T Consensus        79 ---~~~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~  147 (175)
T TIGR01493        79 ---GERLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYEL  147 (175)
T ss_pred             ---HHHHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence               2223333356789999999998       36899999999998888 889999999999999998999999999999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      +++++|++|++|++|||+..|+.+|+++
T Consensus       148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~  175 (175)
T TIGR01493       148 VFDTVGLPPDRVLMVAAHQWDLIGARKF  175 (175)
T ss_pred             HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence            9999999999999999999999999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.84  E-value=4.7e-20  Score=153.97  Aligned_cols=186  Identities=19%  Similarity=0.193  Sum_probs=124.9

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhh-cC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYS   81 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (313)
                      +.+++++++||+||||++++.     +.++++.+|........ ... .| ....+........+. .... +       
T Consensus        10 ~~~~~k~iiFD~DGTL~~~~~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~-~-------   75 (219)
T TIGR00338        10 LLRSKKLVVFDMDSTLINAET-----IDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK-GLPV-E-------   75 (219)
T ss_pred             hhccCCEEEEeCcccCCCchH-----HHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC-CCCH-H-------
Confidence            456789999999999999853     45556666654322222 111 11 122222222222221 1111 1       


Q ss_pred             HHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEE-------ecC---CCCCCCCCh
Q 021360           82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GSD---EVRTGKPSP  151 (313)
Q Consensus        82 ~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~-------~~~---~~~~~kp~~  151 (313)
                      .+.......+++||+.++|+.|++.|++++++|++....+...+ +.+++..+|...+       .+.   ....++|++
T Consensus        76 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  154 (219)
T TIGR00338        76 LLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKG  154 (219)
T ss_pred             HHHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCcccH
Confidence            22222345679999999999999999999999999999888888 7889877774322       111   112356789


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      ..++.+++++++++++|++|||+.+|+.+|+.+|+.+.+ ..   .......++.++.
T Consensus       155 ~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~---~~~~~~~a~~~i~  208 (219)
T TIGR00338       155 KTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA---KPKLQQKADICIN  208 (219)
T ss_pred             HHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC---CHHHHHhchhccC
Confidence            999999999999999999999999999999999998654 32   2222335666655

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.84  E-value=5e-20  Score=150.74  Aligned_cols=186  Identities=26%  Similarity=0.322  Sum_probs=138.7

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh------------------cC-CCHHHHHHHHHHHh
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VG-KTPLEEAAIIVEDY   66 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~g-~~~~~~~~~~~~~~   66 (313)
                      .+.+|+|+||++|||+...+.....+..+.+.+|...+.......                  .| ....++...+....
T Consensus         4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~   83 (237)
T KOG3085|consen    4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST   83 (237)
T ss_pred             ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence            467899999999999998888888899999999988554433211                  12 23444444333322


Q ss_pred             -CCCCC--HHHHHHHH-HHHHHhh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEec
Q 021360           67 -GLPCA--KHEFVNEV-YSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        67 -~~~~~--~~~~~~~~-~~~~~~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~  141 (313)
                       +....  .++....+ ...+... .......+++.++++.++++|..+.++||.+...- ..+ ..+++..+||.++.+
T Consensus        84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l-~~~~l~~~fD~vv~S  161 (237)
T KOG3085|consen   84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLL-LPLGLSAYFDFVVES  161 (237)
T ss_pred             hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHh-hccCHHHhhhhhhhh
Confidence             22111  11111111 1111111 12456677888999999999988999999887654 445 778999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~  193 (313)
                      ...+..||+|.+|+.++++++++|++|++|||+. ||+++|+++||.++.+..
T Consensus       162 ~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~  214 (237)
T KOG3085|consen  162 CEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDN  214 (237)
T ss_pred             hhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence            9999999999999999999999999999999999 799999999999999986

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.82  E-value=3.7e-19  Score=146.48  Aligned_cols=176  Identities=14%  Similarity=0.084  Sum_probs=114.6

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh--hhhcCCCHH-HHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGKTPL-EEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      |+|+|+||+||||+++...+    ..+...++........  ....|.... +.............  ..   ...+.+.
T Consensus         3 ~~k~viFD~DGTLid~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~   73 (201)
T TIGR01491         3 MIKLIIFDLDGTLTDVMSSW----EYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRS--GR---LRREEVE   73 (201)
T ss_pred             cceEEEEeCCCCCcCCccHH----HHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcc--cC---CCHHHHH
Confidence            68899999999999976443    2233334433111111  112222221 11111111110000  00   0111122


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCC----------CChHHH
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK----------PSPDIF  154 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~k----------p~~~~~  154 (313)
                      ..+....++||+.++|+.|++.|++++++|++....++..+ +++|+..+|...+..++.+..+          ++++.+
T Consensus        74 ~~~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~  152 (201)
T TIGR01491        74 EIFKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAV  152 (201)
T ss_pred             HHHHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHH
Confidence            23345689999999999999999999999999999999888 8889877776555544333222          334678


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +.+++++++++++|++|||+.+|+.+++.+|+.+++.+.
T Consensus       153 ~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~  191 (201)
T TIGR01491       153 ERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDE  191 (201)
T ss_pred             HHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCC
Confidence            888899999999999999999999999999998766554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.81  E-value=7.2e-18  Score=139.18  Aligned_cols=184  Identities=13%  Similarity=0.083  Sum_probs=123.9

Q ss_pred             ccEEEEecCCccccChHHH-------HHHHHHHHHHcCCCCChhhhhhhcCCC-HHHHHHHHHHHhCCCCCHHHHHH---
Q 021360            9 MSCVILDLDGTLLNTDGMF-------SEVLKTFLVKYGKEWDGREKHKIVGKT-PLEEAAIIVEDYGLPCAKHEFVN---   77 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~---   77 (313)
                      +++|++|+.||+.+-.-..       .+.+..+++..........+....+.. .......+......+.....+.+   
T Consensus         1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg   80 (220)
T TIGR01691         1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG   80 (220)
T ss_pred             CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence            4789999999999763222       222333333322111122222222221 13333344444444433333322   


Q ss_pred             H-HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc---CCccccceEEecCCCCCCCCChHH
Q 021360           78 E-VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDI  153 (313)
Q Consensus        78 ~-~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~---~~~~~f~~v~~~~~~~~~kp~~~~  153 (313)
                      . +.+.|........++||+.++|++|++.|++++++||++....+..+ ++.   ++..+|+.++..  ....||+|+.
T Consensus        81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~--~~g~KP~p~~  157 (220)
T TIGR01691        81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDT--TVGLKTEAQS  157 (220)
T ss_pred             HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEe--CcccCCCHHH
Confidence            2 33334333345679999999999999999999999999988777666 554   566677776643  2347999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      |..+++++|++|++|++|||+..|+.+|+++|+.++++.+..
T Consensus       158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g  199 (220)
T TIGR01691       158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG  199 (220)
T ss_pred             HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence            999999999999999999999999999999999999987743

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.81  E-value=4.7e-19  Score=142.52  Aligned_cols=123  Identities=24%  Similarity=0.314  Sum_probs=95.8

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEEec-----------C
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------D  142 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~~~-----------~  142 (313)
                      ...++||+.++|+.|++.|++++++||++.               ..+...+ ...++.  |+.++.+           +
T Consensus        24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~  100 (176)
T TIGR00213        24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQ  100 (176)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccC
Confidence            346899999999999999999999999984               2233334 444444  5655443           2


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEeCCCCCcccc-ccccceeecccccc
Q 021360          143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDL  214 (313)
Q Consensus       143 ~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~-~~~s~~ii~~l~e~  214 (313)
                      +...+||+|+.+..+++++++++++|+||||+..|+.+|+++|+++ +++..+...... ...++.+++++.++
T Consensus       101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el  174 (176)
T TIGR00213       101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL  174 (176)
T ss_pred             CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence            4557899999999999999999999999999999999999999998 788775432222 23488888888765

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.80  E-value=3.2e-19  Score=139.14  Aligned_cols=102  Identities=27%  Similarity=0.406  Sum_probs=84.1

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEEe----cCCCCCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVG----SDEVRTGKPS  150 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~~----~~~~~~~kp~  150 (313)
                      ..++||+.++|+.|++.|++++++||.+.               ..+...+ +++++... ..+++    ++.....||+
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~-~~~~~~~~~~~~~~~~KP~  103 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVD-GVLFCPHHPADNCSCRKPK  103 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCcee-EEEECCCCCCCCCCCCCCC
Confidence            36899999999999999999999999873               3444555 67777521 11222    3445568999


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      |+.++.+++++++++++|++|||+..|+.+|+++|+++++++.
T Consensus       104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~  146 (147)
T TIGR01656       104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD  146 (147)
T ss_pred             HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecC
Confidence            9999999999999999999999999999999999999999875

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.80  E-value=8.2e-19  Score=141.90  Aligned_cols=122  Identities=29%  Similarity=0.344  Sum_probs=95.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEEec-----CCCCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~~~-----~~~~~~kp  149 (313)
                      +.++||+.++|+.|++.|++++++||++.               +.+...+ +++++  .|+.++.+     +++...||
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP  104 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKP  104 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCC
Confidence            46899999999999999999999999863               2233344 45565  36766643     34568999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-cccc--ceeecccccc
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDL  214 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~s--~~ii~~l~e~  214 (313)
                      +|+.+..+++++|+++++|++|||+.+|+.+|+++|+.++.+..+...... ...+  +.++.++.++
T Consensus       105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el  172 (181)
T PRK08942        105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL  172 (181)
T ss_pred             CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence            999999999999999999999999999999999999999999775432211 2234  6777777664

>PLN02954 phosphoserine phosphatase

Probab=99.79  E-value=5e-18  Score=142.18  Aligned_cols=192  Identities=18%  Similarity=0.185  Sum_probs=126.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      +++|+|+||+||||++++.     +..+++++|........ ..+.+  ....+.+...+.....  ..    +.+.+.+
T Consensus        10 ~~~k~viFDfDGTL~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~   78 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDEG-----IDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SL----SQVEEFL   78 (224)
T ss_pred             ccCCEEEEeCCCcccchHH-----HHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CH----HHHHHHH
Confidence            5689999999999999854     36677777764332222 23233  2333334333333221  11    1222222


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc--cccce-E-------EecCC----CCCCCC
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSV-I-------VGSDE----VRTGKP  149 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~--~~f~~-v-------~~~~~----~~~~kp  149 (313)
                      ..  ....++||+.++|+.+++.|++++++|++....++..+ +.+|+.  .+|.. +       +.+.+    ....++
T Consensus        79 ~~--~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~  155 (224)
T PLN02954         79 EK--RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG  155 (224)
T ss_pred             HH--ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence            22  13568999999999999999999999999999998888 778886  24432 1       11211    123567


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-cccccccceeecccccc
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDL  214 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~s~~ii~~l~e~  214 (313)
                      +++.++.++++++.  ++|++|||+.+|+.+++.+|+.++....+... ......++.++.++.++
T Consensus       156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el  219 (224)
T PLN02954        156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL  219 (224)
T ss_pred             HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence            88999998888774  68999999999999999988886654332221 11223478888877665

>PRK06769 hypothetical protein; Validated

Probab=99.79  E-value=1e-18  Score=139.92  Aligned_cols=124  Identities=15%  Similarity=0.209  Sum_probs=94.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchH--------HHHHHHHhhcCCccccceEE-ecCCCCCCCCChHHHHHHHHH
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~--------~~~~~l~~~~~~~~~f~~v~-~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      ..++||+.++|++|++.|++++++||++..        .....+ +..|+..+|.... ++++....||+|+.+..++++
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~  105 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK  105 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence            468999999999999999999999998742        122234 5667754433222 345567899999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc-------c-ccccceeecccccc
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-------R-YTAADEVINSLLDL  214 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-------~-~~~s~~ii~~l~e~  214 (313)
                      ++++|++|++|||+..|+.+|+++|+.++.+.++.....       . ...++.++.++.++
T Consensus       106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el  167 (173)
T PRK06769        106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA  167 (173)
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence            999999999999999999999999999999988543211       1 12356666666554

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.78  E-value=5.1e-18  Score=147.93  Aligned_cols=184  Identities=15%  Similarity=0.157  Sum_probs=123.0

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh--hcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK--IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      ..+++++|||||||+..     +.+.++.+..|..........  ..| ....+.+.........  ..+..       +
T Consensus       108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g--~~~~i-------l  173 (322)
T PRK11133        108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG--ADANI-------L  173 (322)
T ss_pred             cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCC--CCHHH-------H
Confidence            46899999999999843     345666666666543322211  112 1222222222221111  01111       1


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc-------eEEecC---CCCCCCCChHH
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDI  153 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~-------~v~~~~---~~~~~kp~~~~  153 (313)
                      .......+++||+.++++.|++.|++++++|++...+.+..+ +++++...+.       ..+++.   +...++++++.
T Consensus       174 ~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~  252 (322)
T PRK11133        174 QQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT  252 (322)
T ss_pred             HHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence            222245789999999999999999999999999988877666 7788854332       111121   22357899999


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      ++++++++|+++++|++|||+.||+.|++.+|+.+++ +.   .+.....++..++
T Consensus       253 L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~  304 (322)
T PRK11133        253 LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR  304 (322)
T ss_pred             HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec
Confidence            9999999999999999999999999999999998876 33   3344446777776

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.77  E-value=1.7e-17  Score=138.01  Aligned_cols=146  Identities=16%  Similarity=0.114  Sum_probs=108.0

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK   89 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (313)
                      +|+|||||||+|+...+         .+|.. .+...+..+.+....                    ..+.+..   -..
T Consensus        65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~~w--------------------~~~~~~~---~~~  112 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQVFW--------------------EKVNNGW---DEF  112 (237)
T ss_pred             EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChHHH--------------------HHHHHhc---ccC
Confidence            89999999999998766         15544 243333333332211                    1111111   134


Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCC----chHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~----~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      ..+.+++.++|+.++++|++++++|+.    ....++..+ +.+|+..+|+.++++++....||++.   .+++++++  
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i--  186 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI--  186 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC--
Confidence            567778999999999999999999998    556666666 88999999999999888777778765   34556665  


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                        ++||||+.+|+.+|+++|++++.+.++..
T Consensus       187 --~i~vGDs~~DI~aAk~AGi~~I~V~~g~~  215 (237)
T TIGR01672       187 --RIHYGDSDNDITAAKEAGARGIRILRASN  215 (237)
T ss_pred             --eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence              79999999999999999999999987543

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.77  E-value=2.9e-17  Score=129.82  Aligned_cols=200  Identities=18%  Similarity=0.222  Sum_probs=140.7

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHH----H-HHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLK----T-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY   80 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~----~-~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (313)
                      ..++++++||+|.||+.....+....+    + +.+++|++-+........-.......-.-+...+...+.+++.+.+.
T Consensus        12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~   91 (244)
T KOG3109|consen   12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVH   91 (244)
T ss_pred             CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhh
Confidence            357899999999999987554433333    3 34467766544332221111111222233444555555555544333


Q ss_pred             HHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC------CCCCChHHH
Q 021360           81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDIF  154 (313)
Q Consensus        81 ~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~------~~kp~~~~~  154 (313)
                      ...-  ++.+.+.+-.+++|-.|+.++  .+++||+++.++.+.+ +++|+.++|+.+++.+...      ..||.++.|
T Consensus        92 ~~LP--lq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~af  166 (244)
T KOG3109|consen   92 GRLP--LQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAF  166 (244)
T ss_pred             ccCc--HhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHHH
Confidence            2211  245888999999998888764  8999999999999999 9999999999999876543      579999999


Q ss_pred             HHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          155 LEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       155 ~~~~~~~~~~-~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +.+++..|++ |+++++|+||.++|..|++.|++++++......    ..++.++.+..+.
T Consensus       167 E~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~----~~~d~~l~~ih~~  223 (244)
T KOG3109|consen  167 EKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI----KGVDYALEQIHNN  223 (244)
T ss_pred             HHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc----cchHHHHHHhhch
Confidence            9999999998 999999999999999999999999998763221    1345555544443

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.76  E-value=5e-18  Score=130.15  Aligned_cols=99  Identities=23%  Similarity=0.419  Sum_probs=84.9

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCc--------hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~--------~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      ..++|++.++|+.|++.|++++++||++        ...+...+ +++++..  +.++.+.  ...||+++.++.+++++
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~~--~~~~~~~--~~~KP~~~~~~~~~~~~   98 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVPI--DVLYACP--HCRKPKPGMFLEALKRF   98 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCCE--EEEEECC--CCCCCChHHHHHHHHHc
Confidence            3688999999999999999999999998        77777777 7788753  3333333  46799999999999999


Q ss_pred             -CCCCCcEEEEec-CHhhHHHHHHcCCeEEEeCC
Q 021360          162 -NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       162 -~~~~~~~i~vgD-~~~Di~~a~~~G~~~i~v~~  193 (313)
                       ++++++++|||| +..|+.+|+++|+.++++.+
T Consensus        99 ~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        99 NEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             CCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence             599999999999 68999999999999999864

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.76  E-value=6.3e-18  Score=133.07  Aligned_cols=102  Identities=15%  Similarity=0.185  Sum_probs=89.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCc---------------hHHHHHHHHhhcCCccccceEE-e----cCCCCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKP  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~~~~~~~f~~v~-~----~~~~~~~kp  149 (313)
                      +.++||+.++|++|+++|++++++||.+               ...+...+ +.+|+.  |+.++ +    +++....||
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP  104 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKP  104 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence            5789999999999999999999999973               44556666 778886  76554 4    477788999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      +++.+..+++++++++++|+||||+.+|+.+|+++|+.++++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~  149 (161)
T TIGR01261       105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE  149 (161)
T ss_pred             CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence            999999999999999999999999999999999999999999884

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.76  E-value=2.7e-18  Score=135.94  Aligned_cols=107  Identities=16%  Similarity=0.069  Sum_probs=94.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCC-chHHHHHHHHhhcCCc---------cccceEEecCCCCCCCCChHHHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEA  157 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~~~~---------~~f~~v~~~~~~~~~kp~~~~~~~~  157 (313)
                      ....++||+.++|+.|++.|++++++|++ ....++..+ +.+++.         .+|+.++++++....||.+..++.+
T Consensus        42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~  120 (174)
T TIGR01685        42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV  120 (174)
T ss_pred             CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence            35688999999999999999999999998 778777777 888988         9999999998876677777777777


Q ss_pred             HHHc--CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          158 AKRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       158 ~~~~--~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      .+.+  +++|++|+||||++.|+.+|+++|+.++.+..+.
T Consensus       121 ~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~  160 (174)
T TIGR01685       121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM  160 (174)
T ss_pred             hhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence            6666  7999999999999999999999999999997754

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.74  E-value=8.2e-17  Score=134.24  Aligned_cols=164  Identities=15%  Similarity=0.165  Sum_probs=110.8

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh-h-cCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I-VGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      -++|+||+||||++.+... .    ++++++. ........ + .|. ...+.+...++.+....     .+.+.+.+. 
T Consensus         3 ~~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~-   70 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNL-----KEEIIQFLL-   70 (219)
T ss_pred             CcEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCc-----hHHHHHHHH-
Confidence            3589999999999998654 2    3333332 11222211 1 122 44556666666543221     122222222 


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc--cc--ceEEecCCCCCCCCChHH--------
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI--------  153 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~--~f--~~v~~~~~~~~~kp~~~~--------  153 (313)
                        ...+++||+.++|+.+++.|++++++|++...++...+ +++ +..  .+  +..+.++.....||+|..        
T Consensus        71 --~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~  146 (219)
T PRK09552         71 --ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG  146 (219)
T ss_pred             --hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence              45789999999999999999999999999999999888 655 432  22  334555555566666543        


Q ss_pred             --HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 021360          154 --FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV  188 (313)
Q Consensus       154 --~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~  188 (313)
                        ...++++++.++++|++|||+.+|+.+|+.+|+.+
T Consensus       147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~  183 (219)
T PRK09552        147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF  183 (219)
T ss_pred             CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence              35677888999999999999999999999999943

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.70  E-value=1.3e-16  Score=122.57  Aligned_cols=103  Identities=31%  Similarity=0.466  Sum_probs=92.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC----------------CCCh
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPSP  151 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~----------------kp~~  151 (313)
                      ....++|++.++++.|++.|++++++|++....++..+ +..++..+++.+++.+.....                ||++
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP   99 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence            45789999999999999999999999999999998888 778888788888877665544                8999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      ..+..+.++++.++++++++||+.+|+.+++.+|++++++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v  139 (139)
T cd01427         100 DKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV  139 (139)
T ss_pred             HHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence            9999999999999999999999999999999999988764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.70  E-value=1.7e-16  Score=125.76  Aligned_cols=96  Identities=16%  Similarity=0.194  Sum_probs=81.8

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchH------------HHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~------------~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ++||+.++|+.|++.|++++++||.+..            .+...+ +++|+..  +.+++++....+||+|+.+..+++
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~  119 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS  119 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence            6899999999999999999999998763            355566 7788743  566666666678999999999999


Q ss_pred             HcC--CCCCcEEEEecCH--------hhHHHHHHcCCeEEE
Q 021360          160 RLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA  190 (313)
Q Consensus       160 ~~~--~~~~~~i~vgD~~--------~Di~~a~~~G~~~i~  190 (313)
                      +++  +++++++||||+.        +|+.+|+++|+.+++
T Consensus       120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664       120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            999  9999999999996        699999999998754

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.70  E-value=5.9e-16  Score=127.83  Aligned_cols=184  Identities=17%  Similarity=0.137  Sum_probs=111.2

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYG-LPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   86 (313)
                      |++|+||+||||++      ..|..+.+++|.+.... .  ..+ ......+..-+.... ...+.+++        ...
T Consensus         1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------~~~   63 (205)
T PRK13582          1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRA-T--TRDIPDYDVLMKQRLDILDEHGLGLADI--------QEV   63 (205)
T ss_pred             CeEEEEeCCCCChh------hHHHHHHHHcCChHHHH-H--hcCCCCHHHHHHHHHHHHHHcCCCHHHH--------HHH
Confidence            57899999999993      24556667777542110 0  001 111111111111110 01111111        223


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC-C---CCCCCCChHHHHHHHHHcC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-E---VRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~-~---~~~~kp~~~~~~~~~~~~~  162 (313)
                      .....++||+.++|+.+++. ++++++|++...+++..+ +++++..+|...+... +   .+..++.|.....++++++
T Consensus        64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~  141 (205)
T PRK13582         64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK  141 (205)
T ss_pred             HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence            35578899999999999999 999999999999999888 8889887775433221 1   1111223334445555666


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccce-eecccccc
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE-VINSLLDL  214 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~-ii~~l~e~  214 (313)
                      ..+++|++|||+.+|+.+++.+|+.+. +.+.  .......+.. +++++.++
T Consensus       142 ~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~--~~~~~~~~~~~~~~~~~el  191 (205)
T PRK13582        142 SLGYRVIAAGDSYNDTTMLGEADAGIL-FRPP--ANVIAEFPQFPAVHTYDEL  191 (205)
T ss_pred             HhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCC--HHHHHhCCcccccCCHHHH
Confidence            677899999999999999999998664 3321  1111113343 67777664

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.69  E-value=9e-16  Score=124.89  Aligned_cols=96  Identities=17%  Similarity=0.201  Sum_probs=79.5

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC--------------------CCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTG  147 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~--------------------~~~~  147 (313)
                      ...+++|++.++++.|++.|++++++|++....++..+ +++++..+|+.+++.+.                    ...+
T Consensus        69 ~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g  147 (188)
T TIGR01489        69 KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG  147 (188)
T ss_pred             HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence            34689999999999999999999999999999998888 88899999998886532                    1233


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 021360          148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       148 kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~  187 (313)
                      .++++.++.+..+.   ++++++|||+.+|+.+|+++++.
T Consensus       148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~  184 (188)
T TIGR01489       148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV  184 (188)
T ss_pred             CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence            44567777776553   89999999999999999999763

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.65  E-value=3.6e-15  Score=122.67  Aligned_cols=103  Identities=20%  Similarity=0.284  Sum_probs=86.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC-------C---CCCCCChHHHHHHHH
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE-------V---RTGKPSPDIFLEAAK  159 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~-------~---~~~kp~~~~~~~~~~  159 (313)
                      ..++|++.++++.+++.|++++++|++...+++.+. +.+|++..+...+..++       .   ..++.+...++++++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            789999999999999999999999999998888777 88999766643333332       1   144567788999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ++|+++++++++||+.||+.|.+.+|.+++.-+.
T Consensus       155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~  188 (212)
T COG0560         155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK  188 (212)
T ss_pred             HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence            9999999999999999999999999998765544

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.65  E-value=6.5e-15  Score=121.31  Aligned_cols=179  Identities=17%  Similarity=0.141  Sum_probs=115.2

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCC-CC---h--hhhhhhc--CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WD---G--REKHKIV--GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~---~--~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      +++||+||||++.+.... .+...+.+.... ..   .  .....+.  +....+....+....-...+.+++.....+.
T Consensus         1 ~a~FD~DgTL~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~   79 (202)
T TIGR01490         1 LAFFDFDGTLTAKDTLFI-FLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEF   79 (202)
T ss_pred             CeEEccCCCCCCCchHHH-HHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            379999999999865432 233333222111 00   0  0001111  1122233333332222234455555555444


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce-EEecCC----------CCCCCCCh
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDE----------VRTGKPSP  151 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~-v~~~~~----------~~~~kp~~  151 (313)
                      +.... ...++|++.++++.+++.|++++++|+++...++..+ +++|+...|.. +...++          ...++++.
T Consensus        80 ~~~~~-~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~  157 (202)
T TIGR01490        80 VNQKI-ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKV  157 (202)
T ss_pred             HHHHH-HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHHH
Confidence            44333 3478999999999999999999999999999998877 88898766543 221111          12345667


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      ..+++++++.++++++|+++||+.+|+.+++.+|..+++.+
T Consensus       158 ~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~  198 (202)
T TIGR01490       158 HALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP  198 (202)
T ss_pred             HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence            77888899999999999999999999999999999875543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.63  E-value=2e-14  Score=117.64  Aligned_cols=160  Identities=18%  Similarity=0.140  Sum_probs=103.8

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCC-CHHHHHHH---HHHHhCCCCCHHHHHHHHHHHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-TPLEEAAI---IVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      |.+++|||||||++.      .|.++..+.|... .. .. ..+. ...+....   +++..|++  .+.+        .
T Consensus         1 ~~la~FDlD~TLi~~------~w~~~~~~~g~~~-~~-~~-~~~~~~~~~~~~~r~~ll~~~g~~--~~~i--------~   61 (203)
T TIGR02137         1 MEIACLDLEGVLVPE------IWIAFAEKTGIDA-LK-AT-TRDIPDYDVLMKQRLRILDEHGLK--LGDI--------Q   61 (203)
T ss_pred             CeEEEEeCCcccHHH------HHHHHHHHcCCcH-HH-HH-hcCCcCHHHHHHHHHHHHHHCCCC--HHHH--------H
Confidence            357999999999964      3667777777431 11 11 1121 11222221   11222333  2222        2


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce--------EEecCCCCCCCCChHHHHH
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--------IVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~--------v~~~~~~~~~kp~~~~~~~  156 (313)
                      +.....+++||+.++++.+++.+ +++++|++...++...+ +++|+..+|..        .+++... ..++.+....+
T Consensus        62 ~~~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~  138 (203)
T TIGR02137        62 EVIATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVI  138 (203)
T ss_pred             HHHHhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHH
Confidence            22345689999999999999974 99999999999998877 88999776641        2222222 23444444444


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .+++.+   .+++++||+.||+.+++.+|.++.+...
T Consensus       139 ~l~~~~---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak  172 (203)
T TIGR02137       139 AFKSLY---YRVIAAGDSYNDTTMLSEAHAGILFHAP  172 (203)
T ss_pred             HHHhhC---CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence            445544   3899999999999999999999887766

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.63  E-value=7.3e-16  Score=133.10  Aligned_cols=121  Identities=25%  Similarity=0.321  Sum_probs=90.4

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEE---ecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~---~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      .++++.++++.|++.|. +.++||.+............+...+|+.+.   ..+....+||+|..+..+++++++++++|
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~  222 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART  222 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence            37899999999998886 788988876443111113345555555443   23444578999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----------ccccceeeccccc
Q 021360          169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLD  213 (313)
Q Consensus       169 i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----------~~~s~~ii~~l~e  213 (313)
                      +||||+. .|+.+|+++|+.++.|.++....+.          ...++++++++.+
T Consensus       223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~  278 (279)
T TIGR01452       223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD  278 (279)
T ss_pred             EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence            9999996 8999999999999999886543222          1257888887765

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.62  E-value=8.7e-16  Score=130.77  Aligned_cols=122  Identities=20%  Similarity=0.208  Sum_probs=95.8

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCCCCcE
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      .++++.+.++.|+..+.+++++||.+..+..... ..+++..+|+.+.......   .+||+|+.++.++++++++|+++
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~  199 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA  199 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence            3578888899999888999999998877665444 5567777777665443322   47999999999999999999999


Q ss_pred             EEEecCH-hhHHHHHHcCCeEEEeCCCCCc-c---ccccccceeecccccc
Q 021360          169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-T---HRYTAADEVINSLLDL  214 (313)
Q Consensus       169 i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~-~---~~~~~s~~ii~~l~e~  214 (313)
                      +||||+. .|+.+|+++|+.++++.++... .   .....++.+++++.++
T Consensus       200 ~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el  250 (257)
T TIGR01458       200 VMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA  250 (257)
T ss_pred             EEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence            9999996 8999999999999999886421 1   1133578888888765

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.61  E-value=3.2e-15  Score=113.47  Aligned_cols=88  Identities=19%  Similarity=0.166  Sum_probs=76.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCC-chHHHHHHHHhhcC-------CccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~-~~~~~~~~l~~~~~-------~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .++||+.++|+.|++.|++++++|++ ....+...+ +..+       +..+|+.++++++    +|+|+.+..+++++|
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg  103 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN  103 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence            57899999999999999999999999 777777666 6677       7888888887753    478899999999999


Q ss_pred             --CCCCcEEEEecCHhhHHHHHH
Q 021360          163 --MEPSSSLVIEDSVIGVVAGKA  183 (313)
Q Consensus       163 --~~~~~~i~vgD~~~Di~~a~~  183 (313)
                        ++|++|+||||+..|+...++
T Consensus       104 ~~~~p~~~l~igDs~~n~~~~~~  126 (128)
T TIGR01681       104 GVLKPKSILFVDDRPDNNEEVDY  126 (128)
T ss_pred             CCCCcceEEEECCCHhHHHHHHh
Confidence              999999999999999877654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.61  E-value=9.4e-15  Score=128.17  Aligned_cols=102  Identities=18%  Similarity=0.235  Sum_probs=86.0

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCC---------------chHHHHHHHHhhcCCccccceEEe-----cCCCCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVG-----SDEVRTGK  148 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~---------------~~~~~~~~l~~~~~~~~~f~~v~~-----~~~~~~~k  148 (313)
                      ...++||+.++|+.|++.|++++++||.               +...+...+ +..++.  |+.++.     ++++..+|
T Consensus        28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~~~~rK  104 (354)
T PRK05446         28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDNCSCRK  104 (354)
T ss_pred             cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCcccCCCCC
Confidence            3579999999999999999999999995               233444455 666773  665543     35667899


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      |+|+.+..+++++++++++++||||+.+|+.+|+.+|++++++++
T Consensus       105 P~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~  149 (354)
T PRK05446        105 PKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR  149 (354)
T ss_pred             CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence            999999999999999999999999999999999999999999977

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.60  E-value=3.1e-14  Score=118.23  Aligned_cols=160  Identities=16%  Similarity=0.189  Sum_probs=103.0

Q ss_pred             EEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh--hhhc-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 021360           12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIV-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC   88 (313)
Q Consensus        12 vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (313)
                      ++||+||||++.+...     .+++.+..+ ....+  .... ..+..+.+...+.......     .+...+.+.   .
T Consensus         2 ~~fDFDgTit~~d~~~-----~~~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-----~~~~~~~~~---~   67 (214)
T TIGR03333         2 IICDFDGTITNNDNII-----SIMKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-----KEEITSFVL---E   67 (214)
T ss_pred             EEeccCCCCCcchhHH-----HHHHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCch-----HHHHHHHHH---h
Confidence            7999999999876432     111112111 01111  1111 2235555555555443321     112222222   2


Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc---ceEEecCCCCCCCCChHHH----------H
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------L  155 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f---~~v~~~~~~~~~kp~~~~~----------~  155 (313)
                      ..+++||+.++++.+++.|++++++|++...+++..+ +.++....+   +.++.++.....+|+|..+          .
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~  146 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP  146 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence            4789999999999999999999999999999998888 555443333   3444455555566665543          4


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 021360          156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       156 ~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~  186 (313)
                      .++++++..++++++|||+.+|+.+|+.+|+
T Consensus       147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~  177 (214)
T TIGR03333       147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL  177 (214)
T ss_pred             HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence            5666777788999999999999999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.60  E-value=2.3e-14  Score=114.37  Aligned_cols=98  Identities=19%  Similarity=0.267  Sum_probs=82.2

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCc-hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      .++|++.++|+.|++.|++++++||++ ...+...+ +.+++..    .     ....||+|+.+..+++++++++++|+
T Consensus        43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~----~-----~~~~KP~p~~~~~~l~~~~~~~~~~l  112 (170)
T TIGR01668        43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPV----L-----PHAVKPPGCAFRRAHPEMGLTSEQVA  112 (170)
T ss_pred             CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEE----E-----cCCCCCChHHHHHHHHHcCCCHHHEE
Confidence            567899999999999999999999998 55555444 6666532    1     13479999999999999999999999


Q ss_pred             EEecCH-hhHHHHHHcCCeEEEeCCCCCcc
Q 021360          170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQT  198 (313)
Q Consensus       170 ~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~  198 (313)
                      +|||+. .|+.+|+++|+.++++.++....
T Consensus       113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~  142 (170)
T TIGR01668       113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPD  142 (170)
T ss_pred             EECCcchHHHHHHHHcCCeEEEEccCcCCc
Confidence            999998 69999999999999998865443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.58  E-value=3e-14  Score=114.75  Aligned_cols=96  Identities=21%  Similarity=0.227  Sum_probs=77.0

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC------------CCCCCCCChHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPDIFL  155 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~------------~~~~~kp~~~~~~  155 (313)
                      ....++|++.++++.+++.|++++++|++...+++..+ +++|+...|...+..+            ....+..+...++
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~  148 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK  148 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence            45678999999999999999999999999999999888 7788876554332221            1123445567888


Q ss_pred             HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 021360          156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       156 ~~~~~~~~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      +++++.+++++++++|||+.+|+.+++.+
T Consensus       149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a  177 (177)
T TIGR01488       149 ELLEESKITLKKIIAVGDSVNDLPMLKLA  177 (177)
T ss_pred             HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence            88888899999999999999999998754

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.57  E-value=4.2e-14  Score=107.56  Aligned_cols=98  Identities=23%  Similarity=0.380  Sum_probs=86.0

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ...|.+.+.+..+++.|+++.++||..+..+.... +++++    +.+..     ..||-+..|+++++++++++++|+|
T Consensus        46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v----~fi~~-----A~KP~~~~fr~Al~~m~l~~~~vvm  115 (175)
T COG2179          46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGV----PFIYR-----AKKPFGRAFRRALKEMNLPPEEVVM  115 (175)
T ss_pred             CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCC----ceeec-----ccCccHHHHHHHHHHcCCChhHEEE
Confidence            34567788899999999999999999999888777 88888    66553     5899999999999999999999999


Q ss_pred             EecCH-hhHHHHHHcCCeEEEeCCCCCcc
Q 021360          171 IEDSV-IGVVAGKAAGMEVVAVPSLPKQT  198 (313)
Q Consensus       171 vgD~~-~Di~~a~~~G~~~i~v~~~~~~~  198 (313)
                      |||.. .|+.+++.+|+++|.|.+....+
T Consensus       116 VGDqL~TDVlggnr~G~~tIlV~Pl~~~d  144 (175)
T COG2179         116 VGDQLFTDVLGGNRAGMRTILVEPLVAPD  144 (175)
T ss_pred             EcchhhhhhhcccccCcEEEEEEEecccc
Confidence            99999 69999999999999999854433

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.57  E-value=1.2e-14  Score=114.86  Aligned_cols=97  Identities=12%  Similarity=0.161  Sum_probs=80.5

Q ss_pred             HHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 021360          100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  179 (313)
Q Consensus       100 l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~  179 (313)
                      ++.|++.|++++++|+.+...++..+ +++++..+|+.         .||+|+.++.+++++++++++|++|||+.+|+.
T Consensus        43 ~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~---------~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~  112 (169)
T TIGR02726        43 VIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEG---------IKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLS  112 (169)
T ss_pred             HHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEec---------CCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHH
Confidence            56678899999999999999999888 88999766653         278899999999999999999999999999999


Q ss_pred             HHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          180 AGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       180 ~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      +++.+|+.+++.+.   .+.....++.+..
T Consensus       113 ~~~~ag~~~am~nA---~~~lk~~A~~I~~  139 (169)
T TIGR02726       113 MMKRVGLAVAVGDA---VADVKEAAAYVTT  139 (169)
T ss_pred             HHHHCCCeEECcCc---hHHHHHhCCEEcC
Confidence            99999998776654   2333334666554

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK08238 hypothetical protein; Validated

Probab=99.56  E-value=1e-14  Score=133.59  Aligned_cols=206  Identities=13%  Similarity=0.074  Sum_probs=129.8

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL   87 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (313)
                      ...-++||+||||+.++..++..+..+ ++.-  ...-......-...                 ..+++.+.+...-..
T Consensus         9 ~~~pl~~DlDgTLi~td~l~e~~~~~l-~~~p--~~~~~l~~~~~~g~-----------------a~lK~~~a~~~~~d~   68 (479)
T PRK08238          9 RDLPLVVDLDGTLIRTDLLHESIFALL-RRNP--LALLRLPLWLLRGK-----------------AALKRRLARRVDLDV   68 (479)
T ss_pred             CCCCEEEeCCCCccccchHHHHHHHHH-HhCh--HHHHHHHHHHHhcH-----------------HHHHHHHHhhcCCCh
Confidence            345699999999999987776544333 2211  10000000000011                 111222211111112


Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ...+++|++.+++++++++|++++++|++++..++..+ +++|+   |+.++++++....||++.. ..+.+.++  .++
T Consensus        69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~  141 (479)
T PRK08238         69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERG  141 (479)
T ss_pred             hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccC
Confidence            34678899999999999999999999999999998877 78887   7999999887766665432 23334443  466


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC---ccccCCCCccccccCCCCCCcccccc
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR---PEKWGLPPFQDWIEGTLPSEPWYIGG  241 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~---~~~~~~~~~~~~~a~~~lg~p~~~~g  241 (313)
                      ++++||+.+|+.+++.+|- .+.|++...-........+.+..+....   ....++.+.++|+.|.+..-|+...+
T Consensus       142 ~~yvGDS~~Dlp~~~~A~~-av~Vn~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~l~Rp~q~~kn~l~~~p~l~a~  217 (479)
T PRK08238        142 FDYAGNSAADLPVWAAARR-AIVVGASPGVARAARALGPVERVFPPRPARLRTWLKALRVHQWAKNLLVFVPLLAAH  217 (479)
T ss_pred             eeEecCCHHHHHHHHhCCC-eEEECCCHHHHHHHHHcCCcceecCCCchHHHHHHHHhCCcHHHHHHHHHHHHHHhc
Confidence            8999999999999999995 5566663322222222333444343322   34567789999998877766776544

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.56  E-value=1.8e-14  Score=119.72  Aligned_cols=90  Identities=31%  Similarity=0.430  Sum_probs=78.1

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      .+++|++.++|+.|++.|++++++|+.....+.... +.+|+.   +.++.+...  +||++..+..+++.+++++++|+
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~  199 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVA  199 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEE
T ss_pred             CcchhhhhhhhhhhhccCcceeeeeccccccccccc-cccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEE
Confidence            467899999999999999999999999888888777 889994   433333322  78998999999999999999999


Q ss_pred             EEecCHhhHHHHHHcC
Q 021360          170 VIEDSVIGVVAGKAAG  185 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G  185 (313)
                      ||||+.||+.|+++||
T Consensus       200 ~vGDg~nD~~al~~Ag  215 (215)
T PF00702_consen  200 MVGDGVNDAPALKAAG  215 (215)
T ss_dssp             EEESSGGHHHHHHHSS
T ss_pred             EEccCHHHHHHHHhCc
Confidence            9999999999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.55  E-value=1.4e-14  Score=113.69  Aligned_cols=100  Identities=18%  Similarity=0.205  Sum_probs=81.3

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      .+++|++.|++++++|+.+...+...+ +++|+..+|+    +     .+|+++.+.++++++++++++|++|||+.+|+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~----~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~  105 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQ----G-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDW  105 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEe----c-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            689999999999999999998888777 8899865543    2     36889999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+. +.+....  +.....++.++.+-
T Consensus       106 ~~~~~ag~~-~~v~~~~--~~~~~~a~~i~~~~  135 (154)
T TIGR01670       106 PVMEKVGLS-VAVADAH--PLLIPRADYVTRIA  135 (154)
T ss_pred             HHHHHCCCe-EecCCcC--HHHHHhCCEEecCC
Confidence            999999998 4444422  22344567777655

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.55  E-value=7.2e-14  Score=116.23  Aligned_cols=99  Identities=15%  Similarity=0.112  Sum_probs=79.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCc----hHHHHHHHHhhcCC--ccccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~----~~~~~~~l~~~~~~--~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      ....++||+.++|+.++++|++++++|+..    ....+..+ +.+|+  ..+|+.+++++..  .|+++..   .++++
T Consensus       111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~  184 (237)
T PRK11009        111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKK  184 (237)
T ss_pred             ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhc
Confidence            347899999999999999999999999964    34455444 67899  8889888887753  5666543   44555


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      ++    +++|||+.+|+.+|+++|++++.+.++..
T Consensus       185 ~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~  215 (237)
T PRK11009        185 NI----RIFYGDSDNDITAAREAGARGIRILRAAN  215 (237)
T ss_pred             CC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence            55    89999999999999999999999988543

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.54  E-value=6.4e-14  Score=122.56  Aligned_cols=105  Identities=17%  Similarity=0.112  Sum_probs=94.1

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc-ccceEEecC-------CCCCCCCChHHHHHHHHH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~~v~~~~-------~~~~~kp~~~~~~~~~~~  160 (313)
                      ...++|++.++++.|++.|++++++|+.+....+..+ +.+++.. +|+.+++.+       +...+||+|+.+..++++
T Consensus       185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~  263 (300)
T PHA02530        185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE  263 (300)
T ss_pred             cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence            3578999999999999999999999999999888777 7788886 899888887       345689999999999999


Q ss_pred             cCC-CCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          161 LNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       161 ~~~-~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++. ++++|++|||+.+|+.+|+++|+.++.+.++
T Consensus       264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence            888 6799999999999999999999999999764

>PRK11590 hypothetical protein; Provisional

Probab=99.53  E-value=8.3e-13  Score=109.35  Aligned_cols=176  Identities=14%  Similarity=0.096  Sum_probs=105.3

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHH-HHcCCCCC-hhhhhhhcCCCHHHHHHH-------HHHHhCCCCCHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFL-VKYGKEWD-GREKHKIVGKTPLEEAAI-------IVEDYGLPCAKHEFVNE   78 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~   78 (313)
                      ..|+++||+||||++..  ....+...+ ++++.... ........|.+.......       ++.......+.+++ +.
T Consensus         5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~   81 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL-QA   81 (211)
T ss_pred             cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH-HH
Confidence            56799999999999443  333444444 77775532 244445555443322111       11111112233332 22


Q ss_pred             HHHHHHhhh-ccCCCCchHHHHH-HHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC--------CCC---
Q 021360           79 VYSMFSDHL-CKVKALPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--------EVR---  145 (313)
Q Consensus        79 ~~~~~~~~~-~~~~~~pgv~e~l-~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~--------~~~---  145 (313)
                      ..+.+.+.+ ....++||+.++| +.+++.|++++++|+++...++..+ +.+++.. .+.+++..        -.+   
T Consensus        82 ~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c  159 (211)
T PRK11590         82 LEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTLRC  159 (211)
T ss_pred             HHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCccC
Confidence            333333322 2257799999999 5788899999999999999998777 6666421 12333322        001   


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .+..+...+++   .++.+.+.+.+.|||.+|+.+.+-+|-++++-
T Consensus       160 ~g~~K~~~l~~---~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn  202 (211)
T PRK11590        160 LGHEKVAQLER---KIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT  202 (211)
T ss_pred             CChHHHHHHHH---HhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence            22223333333   33667788899999999999999999986543

>PRK10444 UMP phosphatase; Provisional

Probab=99.50  E-value=9.4e-14  Score=117.34  Aligned_cols=72  Identities=24%  Similarity=0.340  Sum_probs=60.6

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccccC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR  215 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e~~  215 (313)
                      ...+||+|+.+..+++++++++++|+||||+. .|+.+|+++|+.++++.++....+.    ...++++++++.++.
T Consensus       170 ~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~  246 (248)
T PRK10444        170 FYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID  246 (248)
T ss_pred             cccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence            33689999999999999999999999999997 8999999999999999886544322    235888888887753

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.48  E-value=1.2e-13  Score=117.20  Aligned_cols=77  Identities=27%  Similarity=0.392  Sum_probs=60.9

Q ss_pred             eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccc
Q 021360          137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSL  211 (313)
Q Consensus       137 ~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l  211 (313)
                      ...+.+.+..+||+|+.++.+++++++++++++||||+. .|+.+|+++|++++++.++......    ...++.+++++
T Consensus       167 ~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l  246 (249)
T TIGR01457       167 VATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSL  246 (249)
T ss_pred             HHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCCh
Confidence            334445556789999999999999999999999999997 7999999999999999886543221    12467777766


Q ss_pred             cc
Q 021360          212 LD  213 (313)
Q Consensus       212 ~e  213 (313)
                      .+
T Consensus       247 ~~  248 (249)
T TIGR01457       247 AE  248 (249)
T ss_pred             hh
Confidence            54

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PLN02645 phosphoglycolate phosphatase

Probab=99.45  E-value=1e-13  Score=121.47  Aligned_cols=105  Identities=21%  Similarity=0.235  Sum_probs=74.6

Q ss_pred             CEEEEeCCchHH-HHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHH
Q 021360          109 PMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKA  183 (313)
Q Consensus       109 ~~~i~s~~~~~~-~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~  183 (313)
                      ...++||.+..+ ....+ ...+...+|+.+.......   .+||+|..+..+++++++++++++||||+. +|+.+|++
T Consensus       188 ~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~  266 (311)
T PLN02645        188 CLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQN  266 (311)
T ss_pred             CEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHH
Confidence            356666666533 11122 3345555555554443322   469999999999999999999999999997 89999999


Q ss_pred             cCCeEEEeCCCCCcccc------ccccceeecccccc
Q 021360          184 AGMEVVAVPSLPKQTHR------YTAADEVINSLLDL  214 (313)
Q Consensus       184 ~G~~~i~v~~~~~~~~~------~~~s~~ii~~l~e~  214 (313)
                      +|+.+++|.++......      ...++.+++++.++
T Consensus       267 aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l  303 (311)
T PLN02645        267 GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF  303 (311)
T ss_pred             cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence            99999999876543221      13578888888765

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.40  E-value=5.9e-13  Score=107.58  Aligned_cols=98  Identities=18%  Similarity=0.259  Sum_probs=76.4

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      .++.|+++|++++++|+.+...+...+ +.+++..+|+    +     .+++++.++.+++++|+++++|+||||+.+|+
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~----g-----~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~  125 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ----G-----QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW  125 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec----C-----CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            466677899999999999999888878 8888855443    2     35667999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      .+++.+|+.++ +..  ........++++++
T Consensus       126 ~~a~~aG~~~~-v~~--~~~~~~~~a~~v~~  153 (183)
T PRK09484        126 PVMEKVGLSVA-VAD--AHPLLLPRADYVTR  153 (183)
T ss_pred             HHHHHCCCeEe-cCC--hhHHHHHhCCEEec
Confidence            99999999854 432  11222234666664

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=99.39  E-value=1.4e-11  Score=101.90  Aligned_cols=169  Identities=17%  Similarity=0.155  Sum_probs=111.6

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhhc
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLC   88 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   88 (313)
                      +++||+|+||+|.+...     .+++.++.......+..... ..+.+....+++.+... .+.++        +.+...
T Consensus         2 LvvfDFD~TIvd~dsd~-----~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~--------I~~~l~   68 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDD-----WVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPED--------IRDALR   68 (234)
T ss_pred             EEEEeCCCCccCCccHH-----HHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHH--------HHHHHH
Confidence            58999999999875432     22334443322223222222 22334444444443211 12222        233346


Q ss_pred             cCCCCchHHHHHHHH--HHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC-----------------CCC---C
Q 021360           89 KVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-----------------EVR---T  146 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l--~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~-----------------~~~---~  146 (313)
                      .+++.||+.++++.+  .+.|+.++++|++...+++..| ++.|+...|+.|++-.                 .+.   .
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~  147 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP  147 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence            789999999999999  4579999999999999999999 8899998887776531                 011   1


Q ss_pred             CCCChHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          147 GKPSPDIFLEAAKR---LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       147 ~kp~~~~~~~~~~~---~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ..-+...+.+++..   -|...++++||||+.||+..+.+++-.-++.++
T Consensus       148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R  197 (234)
T PF06888_consen  148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR  197 (234)
T ss_pred             ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence            12245666666665   377889999999999999999988776555555

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.38  E-value=8.8e-12  Score=98.32  Aligned_cols=103  Identities=22%  Similarity=0.322  Sum_probs=81.8

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEEecC-----CCCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGSD-----EVRTGK  148 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~~~~-----~~~~~k  148 (313)
                      .+.+.|++.+.+..+++.|++++++||.+-               ..+...+ +..|+  .|+.++.+.     .+..+|
T Consensus        29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~cRK  105 (181)
T COG0241          29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDCRK  105 (181)
T ss_pred             HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcccC
Confidence            357889999999999999999999999531               1233333 33443  346555432     256899


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      |++.++..+++++++++++.++|||+..|+++|.++|++.+.+.++
T Consensus       106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241         106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             CChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            9999999999999999999999999999999999999997776664

>TIGR01686 FkbH FkbH-like domain

Probab=99.37  E-value=2.3e-12  Score=113.45  Aligned_cols=91  Identities=22%  Similarity=0.148  Sum_probs=82.2

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhh----cCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~----~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      .++|++.++|+.|++.|+.++++|+++...+...+ ++    +++.++|+.+...     .||+++.++.++++++++++
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~  104 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTD  104 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcC
Confidence            35789999999999999999999999999998888 66    7888888887654     57999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCe
Q 021360          167 SSLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~  187 (313)
                      +++||||++.|+.+++++...
T Consensus       105 ~~vfidD~~~d~~~~~~~lp~  125 (320)
T TIGR01686       105 SFLFIDDNPAERANVKITLPV  125 (320)
T ss_pred             cEEEECCCHHHHHHHHHHCCC
Confidence            999999999999999997764

The C-terminal portion of this domain is unique to this family (by BLAST).

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=99.37  E-value=7.9e-11  Score=90.71  Aligned_cols=105  Identities=17%  Similarity=0.165  Sum_probs=81.7

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH--HhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI--SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l--~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      ...+||++.+.+++.++.|+++++.|.++....+-..  .....+..+|+..+..  ....|-...-+.+++...|++|.
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p~  178 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPPA  178 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCch
Confidence            3678999999999999999999999998876554333  1122344444444332  12355566789999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      +++++-|.++.+.+|+.+|+.+..+.+..
T Consensus       179 eilFLSDn~~EL~AA~~vGl~t~l~~R~g  207 (229)
T COG4229         179 EILFLSDNPEELKAAAGVGLATGLAVRPG  207 (229)
T ss_pred             heEEecCCHHHHHHHHhcchheeeeecCC
Confidence            99999999999999999999999988743

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.36  E-value=5.4e-12  Score=108.84  Aligned_cols=114  Identities=13%  Similarity=0.048  Sum_probs=73.1

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCch-----HHHHHHHHhhcCCccccceEEec----CCCCCCCCChHHHHHHHHHcC
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHR-----ATIESKISYQHGWNESFSVIVGS----DEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~-----~~~~~~l~~~~~~~~~f~~v~~~----~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .++++.++++.+...+....++++.+.     ...+... +.+++.    ...+.    +-...+..++..++.+++.+|
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~----~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g  212 (272)
T PRK10530        138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE-HELGLE----CEWSWHDQVDIARKGNSKGKRLTQWVEAQG  212 (272)
T ss_pred             ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh-hhcCce----EEEecCceEEEecCCCChHHHHHHHHHHcC
Confidence            345667777777666665666665432     2222222 444432    11111    112244456789999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ++++++++|||+.||++|++.+|+.+.+-+   ..+.....++.++.+-.+
T Consensus       213 i~~~e~i~~GD~~NDi~m~~~ag~~vamgn---a~~~lk~~Ad~v~~~n~~  260 (272)
T PRK10530        213 WSMKNVVAFGDNFNDISMLEAAGLGVAMGN---ADDAVKARADLVIGDNTT  260 (272)
T ss_pred             CCHHHeEEeCCChhhHHHHHhcCceEEecC---chHHHHHhCCEEEecCCC
Confidence            999999999999999999999998655432   233444567888876654

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.36  E-value=1.1e-12  Score=102.26  Aligned_cols=96  Identities=16%  Similarity=0.075  Sum_probs=85.4

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc-ccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ...++||+.++|+.|+ .+++++++|++...+++..+ +++++.. +|+.+++++++...||+   +.+++++++.+|++
T Consensus        43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~  117 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN  117 (148)
T ss_pred             EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence            4678999999999998 56999999999999999888 7788855 45999999999888886   88888999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCeEE
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVV  189 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i  189 (313)
                      |++|||+..|+.++.++|+.+-
T Consensus       118 ~i~i~Ds~~~~~aa~~ngI~i~  139 (148)
T smart00577      118 VIIIDDSPDSWPFHPENLIPIK  139 (148)
T ss_pred             EEEEECCHHHhhcCccCEEEec
Confidence            9999999999999999997543

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.35  E-value=1.1e-12  Score=110.96  Aligned_cols=98  Identities=23%  Similarity=0.384  Sum_probs=80.4

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceE--EecCCCCCCCCChHHHHHHHHHcCCC-CCcEE
Q 021360           93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL  169 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v--~~~~~~~~~kp~~~~~~~~~~~~~~~-~~~~i  169 (313)
                      ++++.++++.+.++|+++ ++||.+..+....+ ..++...++..+  .+++....+||+|+.++.++++++.. +++|+
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~  217 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML  217 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            689999999998889987 88998887765444 566666666644  45555568999999999999999875 67899


Q ss_pred             EEecC-HhhHHHHHHcCCeEEEeC
Q 021360          170 VIEDS-VIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       170 ~vgD~-~~Di~~a~~~G~~~i~v~  192 (313)
                      ||||+ ..|+.+|+++|+.++++.
T Consensus       218 ~vGD~~~~Di~~a~~~G~~~i~v~  241 (242)
T TIGR01459       218 MVGDSFYTDILGANRLGIDTALVL  241 (242)
T ss_pred             EECCCcHHHHHHHHHCCCeEEEEe
Confidence            99999 599999999999999874

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.35  E-value=6.2e-12  Score=115.82  Aligned_cols=92  Identities=22%  Similarity=0.317  Sum_probs=77.8

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCch------------HHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~------------~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ++|++.+.|+.|++.|++++|+||.+.            ..+...+ +.+|+.  |+.+++.++...+||++.++..+++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~  274 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE  274 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence            689999999999999999999999876            3455566 777874  7888888887889999999999999


Q ss_pred             HcC----CCCCcEEEEecCHhhHHHHHHcCC
Q 021360          160 RLN----MEPSSSLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       160 ~~~----~~~~~~i~vgD~~~Di~~a~~~G~  186 (313)
                      +++    +++++++||||...|+.+++.+|-
T Consensus       275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            884    899999999999988776655553

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.32  E-value=9.4e-11  Score=96.69  Aligned_cols=117  Identities=11%  Similarity=0.045  Sum_probs=73.9

Q ss_pred             CHHHHHHHHHHHHHhhhccCCCCchHHHHHH-HHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC-CC---C
Q 021360           71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV---R  145 (313)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~-~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~-~~---~  145 (313)
                      +.+++.+...+..+.......++|++.+.|+ .+++.|++++++|+++...++... +..++... +.+++.. .+   +
T Consensus        74 ~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg  151 (210)
T TIGR01545        74 REAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGG  151 (210)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCc
Confidence            3444433333333332233468999999996 788899999999999999888777 54333221 2222221 11   1


Q ss_pred             -------CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          146 -------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       146 -------~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                             .+..+...+++   .++.+.+.+.+.|||.+|+.+.+.+|.++.+-+
T Consensus       152 ~~~g~~c~g~~Kv~rl~~---~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp  202 (210)
T TIGR01545       152 WVLPLRCLGHEKVAQLEQ---KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK  202 (210)
T ss_pred             eEcCccCCChHHHHHHHH---HhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence                   22222333333   335566788999999999999999999865443

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.28  E-value=8.2e-11  Score=99.25  Aligned_cols=72  Identities=28%  Similarity=0.447  Sum_probs=61.0

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccccCc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRP  216 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e~~~  216 (313)
                      -.+||++.+++.+++.++.++++++||||+. .||.+|+++|+.++.|.++....+.    ...++++++++.+...
T Consensus       187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~  263 (269)
T COG0647         187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELIT  263 (269)
T ss_pred             ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHh
Confidence            3799999999999999999999999999999 6999999999999999997653322    2457888888877643

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.27  E-value=9e-11  Score=99.31  Aligned_cols=96  Identities=20%  Similarity=0.266  Sum_probs=79.5

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceE------EecCCCCCCCCCh---------H
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------D  152 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v------~~~~~~~~~kp~~---------~  152 (313)
                      ..+.+.||+.++++.|++.|++++++|++....++..+ +++++...+..+      +..+.+..+++.|         .
T Consensus       118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~  196 (277)
T TIGR01544       118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD  196 (277)
T ss_pred             cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence            36899999999999999999999999999999999888 778886666555      4344444556666         5


Q ss_pred             HHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 021360          153 IFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       153 ~~~~~~~~~~--~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      .++...+.++  .++++|+++||+.+|+.||...
T Consensus       197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~  230 (277)
T TIGR01544       197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV  230 (277)
T ss_pred             HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence            6667778888  8999999999999999998766

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=99.26  E-value=8.4e-10  Score=96.41  Aligned_cols=105  Identities=18%  Similarity=0.201  Sum_probs=84.7

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc-C-------CccccceEEecCCCC---------------
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEVR---------------  145 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-~-------~~~~f~~v~~~~~~~---------------  145 (313)
                      .+...|++.++|+.|++.|++++++||++..+++..+ +.+ +       +.++||.|+++..-+               
T Consensus       182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~  260 (343)
T TIGR02244       182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE  260 (343)
T ss_pred             HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence            3567999999999999999999999999999999888 654 6       889999998864211               


Q ss_pred             --CCCCC------------hHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEeCCC
Q 021360          146 --TGKPS------------PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL  194 (313)
Q Consensus       146 --~~kp~------------~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~-~~G~~~i~v~~~  194 (313)
                        ..++.            ...+....+.++.+++++++|||+. .|+..++ .+||++++|.+.
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE  325 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE  325 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence              00100            0224566678899999999999999 6999998 999999999883

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.25  E-value=2.3e-11  Score=102.37  Aligned_cols=48  Identities=29%  Similarity=0.579  Sum_probs=44.7

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~-i~vgD~~-~Di~~a~~~G~~~i~v~~  193 (313)
                      .+||++..++.++++++++++++ +||||+. .|+.+|+++|++++++.+
T Consensus       186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~  235 (236)
T TIGR01460       186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT  235 (236)
T ss_pred             ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence            67999999999999999999887 9999998 799999999999999864

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.23  E-value=3.8e-11  Score=82.14  Aligned_cols=68  Identities=32%  Similarity=0.496  Sum_probs=60.4

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e  213 (313)
                      .+||+|.++..+++++++++++|++|||+ ..|+.+|+++|+.+++|.++....+.    ...+++++++|.|
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e   74 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE   74 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence            58999999999999999999999999999 79999999999999999997654433    2479999999876

...

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.21  E-value=9.6e-11  Score=92.06  Aligned_cols=103  Identities=17%  Similarity=0.185  Sum_probs=71.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCc-hHHHHHHHHhhcCCc----------cccceEEecCCCCCCCCChHHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~~~~----------~~f~~v~~~~~~~~~kp~~~~~~~  156 (313)
                      ..+.++|++.++|+.|++.|++++++|.++ .+.++..| +.+++.          ++|+..-...     -.+..-|++
T Consensus        42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~~-----gsK~~Hf~~  115 (169)
T PF12689_consen   42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIYP-----GSKTTHFRR  115 (169)
T ss_dssp             -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEESS-----S-HHHHHHH
T ss_pred             CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhheec-----CchHHHHHH
Confidence            357899999999999999999999999654 45666667 888988          6666543332     256788999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      +.++.|++.+++++|+|...++....+.|+.++.++.+..
T Consensus       116 i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt  155 (169)
T PF12689_consen  116 IHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT  155 (169)
T ss_dssp             HHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred             HHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence            9999999999999999999999999999999999988543

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.20  E-value=2.1e-11  Score=102.48  Aligned_cols=65  Identities=20%  Similarity=0.174  Sum_probs=52.0

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+..++..++.+++.+|++++++++|||+.||++|++.+|+.+++-+.   .+..+..++.+..+..+
T Consensus       154 ~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na---~~~vk~~a~~v~~~n~~  218 (230)
T PRK01158        154 PGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANA---DEELKEAADYVTEKSYG  218 (230)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCc---cHHHHHhcceEecCCCc
Confidence            556678999999999999999999999999999999999998766544   33444457777765543

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.20  E-value=1.3e-10  Score=90.68  Aligned_cols=93  Identities=18%  Similarity=0.186  Sum_probs=71.2

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc--cc--------ceEEecCCCC----CCCCChHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--------SVIVGSDEVR----TGKPSPDI  153 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~--~f--------~~v~~~~~~~----~~kp~~~~  153 (313)
                      ..+.+.||+++++..|+++|.+++++|++-+.++..+. ..+|+..  .|        +.-+.+++..    .+..+++.
T Consensus        85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~  163 (227)
T KOG1615|consen   85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEV  163 (227)
T ss_pred             CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHH
Confidence            35789999999999999999999999999999888777 7788754  22        2222333322    34455677


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKA  183 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~  183 (313)
                      ++.+.+  +++.+.++||||+.+|++|...
T Consensus       164 i~~lrk--~~~~~~~~mvGDGatDlea~~p  191 (227)
T KOG1615|consen  164 IALLRK--NYNYKTIVMVGDGATDLEAMPP  191 (227)
T ss_pred             HHHHHh--CCChheeEEecCCccccccCCc
Confidence            766654  8899999999999999998655

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=99.16  E-value=1.7e-09  Score=95.18  Aligned_cols=69  Identities=14%  Similarity=0.128  Sum_probs=54.4

Q ss_pred             CCCCChHHHHHHHHHc--------CC-----CCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccc-c--ccccceee
Q 021360          146 TGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH-R--YTAADEVI  208 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~--------~~-----~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~-~--~~~s~~ii  208 (313)
                      .+||++..|+.+++.+        +.     ++++++||||+. .|+.+|+++|+.+++|.++..... .  ...++.++
T Consensus       231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv  310 (321)
T TIGR01456       231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIV  310 (321)
T ss_pred             cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEE
Confidence            5999999999988776        33     457999999999 899999999999999988632221 1  23478888


Q ss_pred             cccccc
Q 021360          209 NSLLDL  214 (313)
Q Consensus       209 ~~l~e~  214 (313)
                      +++.+.
T Consensus       311 ~~l~e~  316 (321)
T TIGR01456       311 NDVFDA  316 (321)
T ss_pred             CCHHHH
Confidence            888764

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.13  E-value=7.7e-11  Score=98.70  Aligned_cols=66  Identities=21%  Similarity=0.179  Sum_probs=52.5

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ..+.++...++.+++++|++++++++|||+.||+.|++.+|+.+++-+.   .+.....++.+..+..+
T Consensus       145 ~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na---~~~~k~~A~~vt~~~~~  210 (225)
T TIGR01482       145 PQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANA---QPELKEWADYVTESPYG  210 (225)
T ss_pred             eCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCCh---hHHHHHhcCeecCCCCC
Confidence            3566778899999999999999999999999999999999998766544   33444567777665443

catalyze the same reaction as SPP.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.10  E-value=6.6e-10  Score=90.57  Aligned_cols=85  Identities=21%  Similarity=0.383  Sum_probs=62.6

Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC----------C---CChHHHHHH---
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA---  157 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~----------k---p~~~~~~~~---  157 (313)
                      |++.++++.+++.|++++++|+++...++..+ +.+++....  +++.......          .   .+...++++   
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~  168 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR  168 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence            56669999999999999999999999998887 788885421  2222111000          0   255666666   


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHH
Q 021360          158 AKRLNMEPSSSLVIEDSVIGVVAGK  182 (313)
Q Consensus       158 ~~~~~~~~~~~i~vgD~~~Di~~a~  182 (313)
                      ... +.+...++++||+.+|+.+++
T Consensus       169 ~~~-~~~~~~~~~iGDs~~D~~~lr  192 (192)
T PF12710_consen  169 DEE-DIDPDRVIAIGDSINDLPMLR  192 (192)
T ss_dssp             HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred             hhc-CCCCCeEEEEECCHHHHHHhC
Confidence            444 789999999999999999875

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.05  E-value=1.1e-09  Score=86.11  Aligned_cols=95  Identities=20%  Similarity=0.311  Sum_probs=66.0

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCc---h-----------HHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA  157 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~---~-----------~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~  157 (313)
                      ..|++.+.|+++.+.|+.++++||..   .           ..+...+ +.+++.  +...++...-..+||.+.++..+
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~  106 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGMWEFA  106 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence            34579999999999999999999872   1           1233333 556654  23444444446899999999999


Q ss_pred             HHHcC----CCCCcEEEEecC-----------HhhHHHHHHcCCeEE
Q 021360          158 AKRLN----MEPSSSLVIEDS-----------VIGVVAGKAAGMEVV  189 (313)
Q Consensus       158 ~~~~~----~~~~~~i~vgD~-----------~~Di~~a~~~G~~~i  189 (313)
                      ++.++    ++.++++||||.           ..|..-|.++|++..
T Consensus       107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~  153 (159)
T PF08645_consen  107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY  153 (159)
T ss_dssp             CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred             HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence            98876    488999999996           578999999999753

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.05  E-value=1.8e-09  Score=89.70  Aligned_cols=97  Identities=15%  Similarity=0.113  Sum_probs=63.7

Q ss_pred             EEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          112 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       112 i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +.+......+...+ +..++...... ..-+-...+..+...++.++++++++++++++|||+.||++|++.+|+.+.+-
T Consensus       112 ~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~  189 (215)
T TIGR01487       112 MREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVA  189 (215)
T ss_pred             ecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcC
Confidence            34444445555555 44554322110 00111234556678999999999999999999999999999999999987666


Q ss_pred             CCCCCccccccccceeeccccc
Q 021360          192 PSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       192 ~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      +.   .+.....++.+..+..+
T Consensus       190 na---~~~~k~~A~~v~~~~~~  208 (215)
T TIGR01487       190 NA---DDQLKEIADYVTSNPYG  208 (215)
T ss_pred             Cc---cHHHHHhCCEEcCCCCC
Confidence            54   34444567777765443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PTZ00445 p36-lilke protein; Provisional

Probab=99.02  E-value=4.8e-09  Score=84.04  Aligned_cols=102  Identities=15%  Similarity=0.218  Sum_probs=81.9

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHH---------------HHHHHHhhcCCccccceEEecC-----------CC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRAT---------------IESKISYQHGWNESFSVIVGSD-----------EV  144 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---------------~~~~l~~~~~~~~~f~~v~~~~-----------~~  144 (313)
                      .+.|++..++.++++.|++++++|-+++..               ++..+ +.-+.....+.+++..           ..
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~  153 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPL  153 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhh
Confidence            368899999999999999999999887744               44444 4334333334444432           12


Q ss_pred             CCCCCChHH--H--HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          145 RTGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       145 ~~~kp~~~~--~--~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +..||+|+.  +  ++++++.|+.|+++++|+|...++.+|+++|+.++.+..
T Consensus       154 gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~  206 (219)
T PTZ00445        154 GLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG  206 (219)
T ss_pred             cccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence            578999999  8  999999999999999999999999999999999999876

>TIGR01684 viral_ppase viral phosphatase

Probab=98.98  E-value=2.2e-09  Score=90.64  Aligned_cols=60  Identities=13%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHH
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF  154 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~  154 (313)
                      |++.++|++|++.|++++++|++.++.+...+ +.+|+..+|+.++++++....+|+++..
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~~  208 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMSTE  208 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCcccc
Confidence            78999999999999999999999999998888 8899999999999999998888887544

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.98  E-value=1.3e-09  Score=86.05  Aligned_cols=206  Identities=16%  Similarity=0.185  Sum_probs=113.7

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcC-CCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--   82 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   82 (313)
                      .+.++.+++|+-|||.++...+..+ .++++++. -..--....+..+.+. ..+..-+.++|++.+.+++.......  
T Consensus         4 ~~~v~gvLlDlSGtLh~e~~avpga-~eAl~rLr~~~~kVkFvTNttk~Sk-~~l~~rL~rlgf~v~eeei~tsl~aa~~   81 (262)
T KOG3040|consen    4 GRAVKGVLLDLSGTLHIEDAAVPGA-VEALKRLRDQHVKVKFVTNTTKESK-RNLHERLQRLGFDVSEEEIFTSLPAARQ   81 (262)
T ss_pred             ccccceEEEeccceEecccccCCCH-HHHHHHHHhcCceEEEEecCcchhH-HHHHHHHHHhCCCccHHHhcCccHHHHH
Confidence            3568899999999999886655443 23333332 1111111111112222 23344556778887777765433222  


Q ss_pred             -HHhhh--ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHH-------HHhhc-------CCccccceEE------
Q 021360           83 -FSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK-------ISYQH-------GWNESFSVIV------  139 (313)
Q Consensus        83 -~~~~~--~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~-------l~~~~-------~~~~~f~~v~------  139 (313)
                       +.+..  ..+.+.+++.+-.+...-..-..+++...++.|--..       |.+..       +-..|++..-      
T Consensus        82 ~~~~~~lrP~l~v~d~a~~dF~gidTs~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgp  161 (262)
T KOG3040|consen   82 YLEENQLRPYLIVDDDALEDFDGIDTSDPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGP  161 (262)
T ss_pred             HHHhcCCCceEEEcccchhhCCCccCCCCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCc
Confidence             22111  1222334555555444444334444444443332111       11110       1111221110      


Q ss_pred             -----------ecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEeCCCCCcc--c--cccc
Q 021360          140 -----------GSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQT--H--RYTA  203 (313)
Q Consensus       140 -----------~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~-Di~~a~~~G~~~i~v~~~~~~~--~--~~~~  203 (313)
                                 .....-.+||++.+|+.++..+|++|++++||||..+ |+-.|+++||+.+.|.++.-.+  +  ....
T Consensus       162 G~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~  241 (262)
T KOG3040|consen  162 GPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVP  241 (262)
T ss_pred             hHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCC
Confidence                       0011127899999999999999999999999999995 8999999999999999864333  1  1334


Q ss_pred             cceeeccccc
Q 021360          204 ADEVINSLLD  213 (313)
Q Consensus       204 s~~ii~~l~e  213 (313)
                      ++...+++.+
T Consensus       242 p~~~~d~f~~  251 (262)
T KOG3040|consen  242 PDLTADNFAD  251 (262)
T ss_pred             cchhhhhHHH
Confidence            5666666654

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.97  E-value=1.2e-08  Score=88.02  Aligned_cols=45  Identities=13%  Similarity=0.028  Sum_probs=41.2

Q ss_pred             CChHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          149 PSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~-~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .+...++.+++.+++++ +++++|||+.||++|++.+|+.+++-+.
T Consensus       190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA  235 (273)
T PRK00192        190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP  235 (273)
T ss_pred             CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence            56678999999999999 9999999999999999999998887765

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.97  E-value=1.8e-08  Score=85.43  Aligned_cols=85  Identities=13%  Similarity=0.213  Sum_probs=63.7

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccc-cceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~-f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ....++||+.++++.+++.|++++++|+++...   ....+ +.+|+... ++.++...+   .++++..++.+.+.+++
T Consensus       115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I  190 (266)
T TIGR01533       115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI  190 (266)
T ss_pred             CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE
Confidence            356789999999999999999999999987443   33455 67888653 456666543   34556777776665555


Q ss_pred             CCCcEEEEecCHhhHHH
Q 021360          164 EPSSSLVIEDSVIGVVA  180 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~  180 (313)
                          +++|||..+|+..
T Consensus       191 ----vl~vGD~~~Df~~  203 (266)
T TIGR01533       191 ----VLLFGDNLLDFDD  203 (266)
T ss_pred             ----EEEECCCHHHhhh
Confidence                8999999999965

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.94  E-value=5.4e-10  Score=84.26  Aligned_cols=84  Identities=19%  Similarity=0.300  Sum_probs=71.1

Q ss_pred             HHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 021360          100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  179 (313)
Q Consensus       100 l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~  179 (313)
                      ++.|.+.|++++++|+.....++... +.+|+    +.++-+     .+.+...+.++++++++++++|.++||..+|+.
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI----~~~~qG-----~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp  113 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRA-KDLGI----KHLYQG-----ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP  113 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCC----ceeeec-----hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence            55678889999999999999998888 88999    555544     233458899999999999999999999999999


Q ss_pred             HHHHcCCeEEEeCC
Q 021360          180 AGKAAGMEVVAVPS  193 (313)
Q Consensus       180 ~a~~~G~~~i~v~~  193 (313)
                      ..+++|.++...+.
T Consensus       114 vm~~vGls~a~~dA  127 (170)
T COG1778         114 VMEKVGLSVAVADA  127 (170)
T ss_pred             HHHHcCCccccccc
Confidence            99999998765544

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=98.93  E-value=2.3e-09  Score=91.99  Aligned_cols=65  Identities=20%  Similarity=0.131  Sum_probs=50.5

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+..+...++.+++++|++++++++|||+.||++|.+.+|..+++-+.   .+.....++.+..+-.+
T Consensus       186 ~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na---~~~~k~~A~~vt~~n~~  250 (264)
T COG0561         186 KGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA---DEELKELADYVTTSNDE  250 (264)
T ss_pred             CCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC---CHHHHhhCCcccCCccc
Confidence            566677899999999999999999999999999999999998777655   33333345545454433

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.90  E-value=2.8e-08  Score=77.89  Aligned_cols=92  Identities=24%  Similarity=0.255  Sum_probs=64.1

Q ss_pred             CCchHHHHHHHHHHCCC--CEEEEeCCc-------hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           92 ALPGANRLIKHLSCHGV--PMALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~--~~~i~s~~~-------~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      +.|.+.+.++++++.+.  ++.++||+.       ...++ .+++.+|+    ..+...    ..||  ..++++++.++
T Consensus        60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~-~~~~~lgI----pvl~h~----~kKP--~~~~~i~~~~~  128 (168)
T PF09419_consen   60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAE-ALEKALGI----PVLRHR----AKKP--GCFREILKYFK  128 (168)
T ss_pred             CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHH-HHHHhhCC----cEEEeC----CCCC--ccHHHHHHHHh
Confidence            44456677777877765  499999984       33344 33477776    433322    3555  44555555554


Q ss_pred             -----CCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCC
Q 021360          163 -----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       163 -----~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~  194 (313)
                           .+|+++++|||.. .|+-+|..+|+.++++..+
T Consensus       129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g  166 (168)
T PF09419_consen  129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG  166 (168)
T ss_pred             hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence                 3599999999999 6999999999999998764

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=98.89  E-value=2.2e-09  Score=92.48  Aligned_cols=66  Identities=18%  Similarity=0.114  Sum_probs=54.2

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ..+-.+...++.+++.+|++++++++|||+.||++|.+.+|..+++-+.   .+..+..++++..+..+
T Consensus       192 ~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA---~~~vK~~A~~vt~~n~~  257 (270)
T PRK10513        192 DKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA---IPSVKEVAQFVTKSNLE  257 (270)
T ss_pred             CCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc---cHHHHHhcCeeccCCCc
Confidence            3566677999999999999999999999999999999999998776654   44445568888776654

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.89  E-value=3.8e-08  Score=78.59  Aligned_cols=172  Identities=16%  Similarity=0.106  Sum_probs=102.6

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCC-CHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-TPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   85 (313)
                      +.-+++||+|-|++|.+..-     .+...++..-...+.+..... -+.+....+++.++-. ...++        ...
T Consensus        12 ~ril~~FDFD~TIid~dSD~-----wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~--------ik~   78 (256)
T KOG3120|consen   12 PRILLVFDFDRTIIDQDSDN-----WVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAE--------IKQ   78 (256)
T ss_pred             CcEEEEEecCceeecCCcch-----HHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHH--------HHH
Confidence            45678999999999764321     112222322221222111111 1233333444443311 11222        222


Q ss_pred             hhccCCCCchHHHHHHHHHHCCC-CEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC------------C-----CC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV------------R-----TG  147 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~------------~-----~~  147 (313)
                      .+..++..||+.++++.+++.|. .+.++|.++..|++..| +.+++.+.|..|++-...            .     ..
T Consensus        79 ~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~  157 (256)
T KOG3120|consen   79 VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNL  157 (256)
T ss_pred             HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCc
Confidence            33568999999999999999885 99999999999999999 889999888776653210            0     01


Q ss_pred             CC----ChHHHHHH---HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          148 KP----SPDIFLEA---AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       148 kp----~~~~~~~~---~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      -|    +...+.++   ..+-|+..++++|+||+.||+..-....-.-++.++
T Consensus       158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR  210 (256)
T KOG3120|consen  158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR  210 (256)
T ss_pred             CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc
Confidence            11    12223222   234578889999999999999876555444334443

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.88  E-value=2.3e-08  Score=86.22  Aligned_cols=65  Identities=9%  Similarity=0.063  Sum_probs=50.5

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccce--eeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE--VINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~--ii~~l~e  213 (313)
                      .+-.+...++.+++.+|++++++++|||+.||++|.+.+|..+++-+.   .+..+..++.  ++.+..+
T Consensus       185 ~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na---~~~vK~~A~~~~v~~~n~e  251 (272)
T PRK15126        185 VGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA---MPQLRAELPHLPVIGHCRN  251 (272)
T ss_pred             CCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC---hHHHHHhCCCCeecCCCcc
Confidence            555677999999999999999999999999999999999997766554   3344444553  5555544

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.87  E-value=1.3e-08  Score=85.43  Aligned_cols=70  Identities=27%  Similarity=0.369  Sum_probs=57.2

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcc--------ccccccceeeccccccC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT--------HRYTAADEVINSLLDLR  215 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~--------~~~~~s~~ii~~l~e~~  215 (313)
                      .+||++.++..++++++++|++++||||+. .||..++.+|++++++-++....        .....+++.++++.++.
T Consensus       222 ~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~  300 (306)
T KOG2882|consen  222 LGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLL  300 (306)
T ss_pred             cCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHh
Confidence            789999999999999999999999999999 59999999999999998864421        11234667777665543

>PRK10976 putative hydrolase; Provisional

Probab=98.87  E-value=1.8e-08  Score=86.59  Aligned_cols=65  Identities=18%  Similarity=0.140  Sum_probs=51.3

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccc--eeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~--~ii~~l~e  213 (313)
                      .+-.+...++.+++.+|++++++++|||+.||++|.+.+|..+++-+.   .+..+..++  .++.+..+
T Consensus       187 ~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA---~~~vK~~A~~~~v~~~n~e  253 (266)
T PRK10976        187 GGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNA---HQRLKDLLPELEVIGSNAD  253 (266)
T ss_pred             CCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCC---cHHHHHhCCCCeecccCch
Confidence            555667999999999999999999999999999999999998776655   334444554  56665544

>PLN02887 hydrolase family protein

Probab=98.80  E-value=5.9e-08  Score=91.08  Aligned_cols=66  Identities=15%  Similarity=0.088  Sum_probs=54.1

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ..+-.+...++.+++.+|++++++++|||+.||++|.+.+|..+++-+.   .+..+..++.+..+..+
T Consensus       503 p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA---~eeVK~~Ad~VT~sNdE  568 (580)
T PLN02887        503 PPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNG---AEKTKAVADVIGVSNDE  568 (580)
T ss_pred             cCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCC---CHHHHHhCCEEeCCCCc
Confidence            3556677899999999999999999999999999999999998776654   44455568888876654

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.78  E-value=1.4e-07  Score=78.70  Aligned_cols=44  Identities=14%  Similarity=-0.022  Sum_probs=38.6

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      +-.++..++.+++.+|++++++++|||+.||+.|.+.+|..+++
T Consensus       177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~  220 (221)
T TIGR02463       177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI  220 (221)
T ss_pred             CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence            33456788999999999999999999999999999999997653

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.74  E-value=3.3e-07  Score=71.19  Aligned_cols=117  Identities=17%  Similarity=0.165  Sum_probs=75.7

Q ss_pred             CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc
Q 021360           54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE  133 (313)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~  133 (313)
                      +.++.+.+++...+.+.  ++.       .......+.+.||.+++++.+++.+++++++|++-..++..++ +...-.+
T Consensus        45 S~rd~~g~mf~~i~~s~--~Ei-------le~llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lf-e~ivgke  114 (220)
T COG4359          45 SFRDGFGRMFGSIHSSL--EEI-------LEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLF-EGIVGKE  114 (220)
T ss_pred             eHHHHHHHHHHhcCCCH--HHH-------HHHHHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHH-Hhhcccc
Confidence            34455556666555442  222       1222245789999999999999999999999999999999888 4443211


Q ss_pred             ccceE-Ee----------------cC--CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 021360          134 SFSVI-VG----------------SD--EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       134 ~f~~v-~~----------------~~--~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~  186 (313)
                      ..+.+ ++                .+  .++..||  .    .+..+.-+++.++|.||+..|+++|+....
T Consensus       115 ~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDl  180 (220)
T COG4359         115 RIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDL  180 (220)
T ss_pred             ceeeeEEeecCceEcCCCceeeecCCccccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhh
Confidence            11111 11                11  1223333  2    334445567789999999999999988775

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.73  E-value=2.5e-08  Score=85.95  Aligned_cols=49  Identities=8%  Similarity=-0.096  Sum_probs=43.2

Q ss_pred             CCCCCChHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          145 RTGKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~---~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ..+-.+...++.+++.+|+   ++++++.|||+.||++|.+.+|..+++-+.
T Consensus       183 ~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~  234 (271)
T PRK03669        183 DASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGL  234 (271)
T ss_pred             cCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCC
Confidence            3556677899999999999   999999999999999999999998777643

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=98.73  E-value=6.6e-08  Score=81.57  Aligned_cols=49  Identities=14%  Similarity=-0.041  Sum_probs=43.3

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      ...+.+++..++.+++++|++++++++|||+.||+.|++.+|..+.+-+
T Consensus       154 ~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n  202 (236)
T TIGR02471       154 LPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN  202 (236)
T ss_pred             eeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC
Confidence            3467788899999999999999999999999999999999998775543

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.72  E-value=3.4e-08  Score=84.35  Aligned_cols=65  Identities=18%  Similarity=0.154  Sum_probs=51.7

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-.+...++.+++.++++++++++|||+.||+.|++.+|+.+++.+.   .+.....++.+..+..+
T Consensus       185 ~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na---~~~~k~~a~~~~~~n~~  249 (256)
T TIGR00099       185 KGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA---DEELKALADYVTDSNNE  249 (256)
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc---hHHHHHhCCEEecCCCC
Confidence            555677999999999999999999999999999999999998766533   33334457777766544

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme

Probab=98.68  E-value=4.4e-08  Score=78.87  Aligned_cols=113  Identities=20%  Similarity=0.254  Sum_probs=81.6

Q ss_pred             hHHHHHHHHHHCCCCEEEEe--------CCchHHHHHHHHhhcCCccccceEEecCCCCC---CCCChHHHHHHHHHcCC
Q 021360           95 GANRLIKHLSCHGVPMALAS--------NSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~s--------~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~---~kp~~~~~~~~~~~~~~  163 (313)
                      ...+-++.+++.|+..+++-        .++.++++..+ ...+.    +.+++|+|+..   +.++.+.+++.++++|+
T Consensus        57 ~~e~R~~~l~~l~vd~v~~~~f~~~~~~~s~~~Fi~~il-~~~~~----~~ivvG~Df~FG~~~~g~~~~L~~~~~~~g~  131 (180)
T cd02064          57 TLEEKLELLESLGVDYLLVLPFDKEFASLSAEEFVEDLL-VKLNA----KHVVVGFDFRFGKGRSGDAELLKELGKKYGF  131 (180)
T ss_pred             CHHHHHHHHHHcCCCEEEEeCCCHHHHcCCHHHHHHHHH-hhcCC----eEEEEccCCCCCCCCCCCHHHHHHhhhhcCc
Confidence            34556667777777666542        24566666555 33355    88888888863   45677778777777777


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccccccce
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV  243 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v  243 (313)
                      .                       ++.++.. ..+....+|+.+++.+.+++++.          |+.+||+||.++|+|
T Consensus       132 ~-----------------------v~~v~~~-~~~~~~iSST~IR~~i~~G~i~~----------an~lLg~~y~~~g~V  177 (180)
T cd02064         132 E-----------------------VTVVPPV-TLDGERVSSTRIREALAEGDVEL----------ANELLGRPYSIEGRV  177 (180)
T ss_pred             E-----------------------EEEeCcE-ecCCcEEcHHHHHHHHHhCCHHH----------HHHHcCCCcEEEEEE
Confidence            6                       5566553 22333458889999999999999          999999999999999


Q ss_pred             eee
Q 021360          244 VKG  246 (313)
Q Consensus       244 ~~g  246 (313)
                      +||
T Consensus       178 ~~G  180 (180)
T cd02064         178 VHG  180 (180)
T ss_pred             eeC
Confidence            997

FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.68  E-value=1.4e-08  Score=80.24  Aligned_cols=100  Identities=8%  Similarity=0.055  Sum_probs=85.2

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc-ccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .+..+||+.++|+.+.+. +.+++.|++.+.+++..+ +.++... .|+.+++.+++...+|+   +.+.+..+|.++++
T Consensus        40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~  114 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK  114 (162)
T ss_pred             EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence            457889999999999988 999999999999999888 7788765 78888888887666665   56667788999999


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +++|||++.++.++...|+.+.....
T Consensus       115 vIiVDD~~~~~~~~~~NgI~i~~f~~  140 (162)
T TIGR02251       115 VIIIDNSPYSYSLQPDNAIPIKSWFG  140 (162)
T ss_pred             EEEEeCChhhhccCccCEeecCCCCC
Confidence            99999999999999999987655543

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.63  E-value=1e-07  Score=77.64  Aligned_cols=167  Identities=16%  Similarity=0.282  Sum_probs=87.8

Q ss_pred             cE-EEEecCCccccChHHHHHHHHHHHHHcCCC--CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH--
Q 021360           10 SC-VILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS--   84 (313)
Q Consensus        10 k~-vifDlDGTL~d~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   84 (313)
                      ++ |++|+||||.|....+.+.+.   +.++..  ++.+....+   ..       .+.++..  .++....+.+.+.  
T Consensus         2 ~i~I~iDiDgVLad~~~~~~~~~n---~~~~~~~~~~~~~~~~~---~~-------~~~~g~~--~~e~~~~~~~~~~~~   66 (191)
T PF06941_consen    2 KIRIAIDIDGVLADFNSAFIEWFN---EEFGKNPELTPEDITGY---WD-------WEKWGIT--EPEFYEKLWRFYEEP   66 (191)
T ss_dssp             -EEEEEESBTTTB-HHHHHHHHHH---HHTTTS----GGGGTSS---SH-------HHHHHHH--STTHHHHHHHHHTST
T ss_pred             CcEEEEECCCCCcccHHHHHHHHH---HHcCCCCCCCHHHhhhh---hH-------HHHhCCC--CHHHHHHHHHHHhCh
Confidence            35 899999999998765544433   345555  444433210   10       1111100  0122233333332  


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchH-------HHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHH
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA  157 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~-------~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~  157 (313)
                      ..+..+++.||+.+.|+.|.+.|+.++++|..+..       .....+.++++...+-+.+++++     |.        
T Consensus        67 ~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~--------  133 (191)
T PF06941_consen   67 GFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT--------  133 (191)
T ss_dssp             TTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG--------
T ss_pred             hhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC--------
Confidence            23567899999999999999999777777766543       22334545555433324455432     21        


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       158 ~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                        .++.+    ++|+|++..+..+...|+++++++........   .-.++.+..|
T Consensus       134 --~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e  180 (191)
T PF06941_consen  134 --LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE  180 (191)
T ss_dssp             --GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred             --eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence              12222    89999999999999999999999885433222   3444555544

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=98.61  E-value=5.3e-07  Score=76.70  Aligned_cols=50  Identities=24%  Similarity=0.240  Sum_probs=42.3

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ...+.++...++.+++.+|+++++|++|||+.||+.|++.++...+.+..
T Consensus       162 ~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n  211 (249)
T TIGR01485       162 LPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN  211 (249)
T ss_pred             EeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence            34678888999999999999999999999999999999996554455544

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.59  E-value=2e-07  Score=79.03  Aligned_cols=51  Identities=16%  Similarity=0.217  Sum_probs=46.3

Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR  145 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~  145 (313)
                      |++.++|++|++.|++++++|+++++.+...+ +.+|+..+|+.++++++..
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~  201 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA  201 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence            68899999999999999999999999998888 8899999999998887654

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.57  E-value=2.7e-07  Score=87.45  Aligned_cols=105  Identities=19%  Similarity=0.188  Sum_probs=77.0

Q ss_pred             CCCCchHHHHHHHHHHCC-CCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           90 VKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      .+++||+.++++.|++.| ++++++|+.+...++..+ +++|+..+|..+       .++++++    .+++++..+++|
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~-------~p~~K~~----~v~~l~~~~~~v  450 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAEL-------LPEDKLA----IVKELQEEGGVV  450 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccC-------CHHHHHH----HHHHHHHcCCEE
Confidence            578999999999999999 999999999999988888 889996555432       1122233    444444467799


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      +|+||+.+|+.+++++|+.+.+-   ...+.....++.++.
T Consensus       451 ~~vGDg~nD~~al~~A~vgia~g---~~~~~~~~~Ad~vi~  488 (556)
T TIGR01525       451 AMVGDGINDAPALAAADVGIAMG---AGSDVAIEAADIVLL  488 (556)
T ss_pred             EEEECChhHHHHHhhCCEeEEeC---CCCHHHHHhCCEEEe
Confidence            99999999999999999654443   212222335666666

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.57  E-value=7.9e-07  Score=75.33  Aligned_cols=65  Identities=20%  Similarity=0.136  Sum_probs=51.5

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-.+...++.+++.+|++++++++|||+.||++|.+.+|..+++-+.   .+.....++.+..+-.+
T Consensus       183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na---~~~~k~~a~~i~~~~~~  247 (254)
T PF08282_consen  183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNA---TPELKKAADYITPSNND  247 (254)
T ss_dssp             TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS----HHHHHHSSEEESSGTC
T ss_pred             CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCC---CHHHHHhCCEEecCCCC
Confidence            445567899999999999999999999999999999999998766544   34444567777766554

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.54  E-value=1.9e-07  Score=79.10  Aligned_cols=91  Identities=20%  Similarity=0.300  Sum_probs=75.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHH--HHHHhhcCCcc-ccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~--~~l~~~~~~~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      ..++||+.++|++|++.|++++++||+++....  ..+ +++|+.. +|+.++++.+...     +.+..++++++.+++
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~   96 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNG   96 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCc
Confidence            467999999999999999999999999876654  566 8899987 8999998875432     466677778888999


Q ss_pred             cEEEEecCHhhHHHHHHcCC
Q 021360          167 SSLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~  186 (313)
                      +++++||+..|+.....++.
T Consensus        97 ~~~~vGd~~~d~~~~~~~~~  116 (242)
T TIGR01459        97 IIYLLGHLENDIINLMQCYT  116 (242)
T ss_pred             eEEEeCCcccchhhhcCCCc
Confidence            99999999999887766554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.50  E-value=4.4e-07  Score=85.55  Aligned_cols=112  Identities=21%  Similarity=0.250  Sum_probs=80.7

Q ss_pred             cCCCCchHHHHHHHHHHCCC-CEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           89 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~-~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ..+++|++.+.++.|++.|+ +++++|+.+...++..+ +++|+..+|..+.       +.++    ..++++++.+.++
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~  427 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL-------PEDK----LEIVKELREKYGP  427 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC-------cHHH----HHHHHHHHhcCCE
Confidence            35789999999999999999 99999999999998888 8899966554221       2222    3344555556689


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceee--cccccc
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDL  214 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii--~~l~e~  214 (313)
                      ++|+||+.||+.+++.+|+.+.+-..  ..+.....++.++  +++.++
T Consensus       428 v~~vGDg~nD~~al~~A~vgia~g~~--~~~~~~~~ad~vl~~~~l~~l  474 (536)
T TIGR01512       428 VAMVGDGINDAPALAAADVGIAMGAS--GSDVAIETADVVLLNDDLSRL  474 (536)
T ss_pred             EEEEeCCHHHHHHHHhCCEEEEeCCC--ccHHHHHhCCEEEECCCHHHH
Confidence            99999999999999999974443211  1222233567666  555554

.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.45  E-value=3.8e-07  Score=76.19  Aligned_cols=44  Identities=9%  Similarity=0.037  Sum_probs=35.8

Q ss_pred             CCCChHHHHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          147 GKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~--~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      +-.++..++.+++.+++  +++++++|||+.||+.|.+.+|+.+++
T Consensus       179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v  224 (225)
T TIGR02461       179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV  224 (225)
T ss_pred             CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence            44456777888887765  677999999999999999999997653

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=98.43  E-value=2e-05  Score=63.68  Aligned_cols=105  Identities=15%  Similarity=0.097  Sum_probs=78.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC-CCCCChHHHHHHHHHcCCCCCcE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~-~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ...++++...++..+..|+++++.|.++....+.+. .+-+-.+.-..+-+.+|.. ..|-....+..+.+..|.++.++
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~ei  200 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREI  200 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhhe
Confidence            478999999999999999999999988877655433 2222111111222222222 35666788999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      ++.-|.+....+|+.+|+.+..+.++.
T Consensus       201 LfLTd~~~Ea~aa~~aGl~a~l~~rPg  227 (254)
T KOG2630|consen  201 LFLTDVPREAAAARKAGLQAGLVSRPG  227 (254)
T ss_pred             EEeccChHHHHHHHhcccceeeeecCC
Confidence            999999999999999999988877643

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.37  E-value=3.5e-06  Score=60.88  Aligned_cols=84  Identities=19%  Similarity=0.172  Sum_probs=54.4

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchH---HHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .++||+.++++.|++.|.++.++||++..   .....| +.+|+....+.++++.         ......+++. ....+
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~   82 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK   82 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence            46789999999999999999999998643   334455 6788865556666653         3444455543 45677


Q ss_pred             EEEEecCHhhHHHHHHcCC
Q 021360          168 SLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~  186 (313)
                      ++++|-. ...+..+.+|+
T Consensus        83 v~vlG~~-~l~~~l~~~G~  100 (101)
T PF13344_consen   83 VYVLGSD-GLREELREAGF  100 (101)
T ss_dssp             EEEES-H-HHHHHHHHTTE
T ss_pred             EEEEcCH-HHHHHHHHcCC
Confidence            8887755 55555666664

...

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.37  E-value=8.6e-06  Score=67.30  Aligned_cols=103  Identities=17%  Similarity=0.138  Sum_probs=63.1

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      ...+..|++.++++.+++.|+.++++|+.+...   ....| ...|+..+ +.++....-...+..........+++--+
T Consensus       117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~  194 (229)
T TIGR01675       117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE  194 (229)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence            456899999999999999999999999998765   44455 56676543 55555432122332211111111121112


Q ss_pred             CCc-EEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          165 PSS-SLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       165 ~~~-~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .-+ +..|||..+|+.. ..+|.++...+.
T Consensus       195 GYrIv~~iGDq~sDl~G-~~~~~RtFKLPN  223 (229)
T TIGR01675       195 GYRIWGNIGDQWSDLLG-SPPGRRTFKLPN  223 (229)
T ss_pred             CceEEEEECCChHHhcC-CCccCceeeCCC
Confidence            223 4568999999965 355656655544

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.37  E-value=6.4e-07  Score=76.50  Aligned_cols=48  Identities=13%  Similarity=0.014  Sum_probs=42.6

Q ss_pred             CCCCChHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~--~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .+..+...++.+++.++++  .+++++|||+.||+.|.+.+|..+++-+.
T Consensus       173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na  222 (256)
T TIGR01486       173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP  222 (256)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence            4556678899999999999  99999999999999999999998877665

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.36  E-value=8.1e-07  Score=69.53  Aligned_cols=86  Identities=17%  Similarity=0.096  Sum_probs=64.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc-ccc-ceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~~f-~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      ....++||+.++|+.+++. +.++++|++.+.++...+ +.++.. .+| +.+++.+++..  +.   .+.+-..++.+.
T Consensus        55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~~--~~---~KdL~~i~~~d~  127 (156)
T TIGR02250        55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESGS--PH---TKSLLRLFPADE  127 (156)
T ss_pred             EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCCC--Cc---cccHHHHcCCCc
Confidence            3567899999999999966 999999999999999888 888877 478 66777766541  11   111213357788


Q ss_pred             CcEEEEecCHhhHHH
Q 021360          166 SSSLVIEDSVIGVVA  180 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~  180 (313)
                      +.+++|+|++.-...
T Consensus       128 ~~vvivDd~~~~~~~  142 (156)
T TIGR02250       128 SMVVIIDDREDVWPW  142 (156)
T ss_pred             ccEEEEeCCHHHhhc
Confidence            999999999854333

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=98.34  E-value=2.3e-06  Score=70.39  Aligned_cols=45  Identities=22%  Similarity=0.145  Sum_probs=41.3

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV  189 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i  189 (313)
                      ..+.+++..++.+++++++++++++++||+.+|+.+++.+|+.++
T Consensus       159 p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va  203 (204)
T TIGR01484       159 PAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA  203 (204)
T ss_pred             cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence            367788899999999999999999999999999999999999765

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=98.31  E-value=3.1e-05  Score=70.57  Aligned_cols=105  Identities=19%  Similarity=0.234  Sum_probs=69.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc--------CCccccceEEecCC-----------------C
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V  144 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--------~~~~~f~~v~~~~~-----------------~  144 (313)
                      +...|.+..+|+.|++.|.++.++|||+-.++...+.-.+        .+.++||.|++...                 .
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~  261 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET  261 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence            3446899999999999999999999999999887773222        46789999988531                 0


Q ss_pred             C---C-------CCC---ChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHc-CCeEEEeCCC
Q 021360          145 R---T-------GKP---SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPSL  194 (313)
Q Consensus       145 ~---~-------~kp---~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~-G~~~i~v~~~  194 (313)
                      +   .       .++   .......+.+.+|....+|++|||+. .|+...+.. ||+++.|-+.
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E  326 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE  326 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence            0   0       011   11224556667888899999999999 698887666 9999999774

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.29  E-value=2.3e-06  Score=62.69  Aligned_cols=90  Identities=17%  Similarity=0.115  Sum_probs=65.3

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH------Hc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK------RL  161 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~------~~  161 (313)
                      .++.++|.+.+++..++..|+-+..+|-+.....-..| +.+++..+|+.++.-..-  .|.  .++..++.      ..
T Consensus        38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~ViePhP--~K~--~ML~~llr~i~~er~~  112 (164)
T COG4996          38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVIEPHP--YKF--LMLSQLLREINTERNQ  112 (164)
T ss_pred             eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEecCCC--hhH--HHHHHHHHHHHHhhcc
Confidence            35789999999999999999988888877666665567 789999999988763221  111  23333332      34


Q ss_pred             CCCCCcEEEEecCHhhHHHHH
Q 021360          162 NMEPSSSLVIEDSVIGVVAGK  182 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~  182 (313)
                      .++|.++++++|..-.+.-..
T Consensus       113 ~ikP~~Ivy~DDR~iH~~~Iw  133 (164)
T COG4996         113 KIKPSEIVYLDDRRIHFGNIW  133 (164)
T ss_pred             ccCcceEEEEecccccHHHHH
Confidence            588999999999986655533

>smart00775 LNS2 LNS2 domain

Probab=98.27  E-value=1.4e-05  Score=62.75  Aligned_cols=92  Identities=14%  Similarity=0.206  Sum_probs=57.1

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCCchHHHH---HHHHhh-----cCCccccceEEecCCCC---------CCCC---ChH
Q 021360           93 LPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEVR---------TGKP---SPD  152 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~-----~~~~~~f~~v~~~~~~~---------~~kp---~~~  152 (313)
                      .|++.++++++++.|++++++|+++.....   ..+ +.     .++..  ..++++....         ..++   +.+
T Consensus        29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp~--g~li~~~g~~~~~~~~e~i~~~~~~~K~~  105 (157)
T smart00775       29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLPH--GPVLLSPDRLFAALHREVISKKPEVFKIA  105 (157)
T ss_pred             CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCCC--ceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence            579999999999999999999999877663   444 33     22321  2344333211         1222   233


Q ss_pred             HHHHHHHHcCCCCCc-EEEEecCHhhHHHHHHcCCe
Q 021360          153 IFLEAAKRLNMEPSS-SLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~-~i~vgD~~~Di~~a~~~G~~  187 (313)
                      .++.+.+.+.-.--. +..+||+.+|+.+-+++|+.
T Consensus       106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~  141 (157)
T smart00775      106 CLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP  141 (157)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence            444444333211222 34588889999999999986

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.26  E-value=3.5e-06  Score=79.87  Aligned_cols=104  Identities=17%  Similarity=0.184  Sum_probs=74.2

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      .+++|++.++++.|++.|++++++|+.+...++..+ +++|+.     ++. +.  .++++.+.+    +++.-++++|+
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-----~~~-~~--~p~~K~~~v----~~l~~~~~~v~  470 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-----VRA-EV--LPDDKAALI----KELQEKGRVVA  470 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-----EEc-cC--ChHHHHHHH----HHHHHcCCEEE
Confidence            468999999999999999999999999999888877 888983     221 11  122333433    33444678999


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      |+||+.||+.+++.+|+.+.+- .+  .+.....++.++.
T Consensus       471 ~VGDg~nD~~al~~A~vgia~g-~g--~~~a~~~Advvl~  507 (562)
T TIGR01511       471 MVGDGINDAPALAQADVGIAIG-AG--TDVAIEAADVVLM  507 (562)
T ss_pred             EEeCCCccHHHHhhCCEEEEeC-Cc--CHHHHhhCCEEEe
Confidence            9999999999999999854332 21  2222334666663

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.21  E-value=8.3e-05  Score=68.93  Aligned_cols=92  Identities=13%  Similarity=0.043  Sum_probs=56.6

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC-C---C------CCC-C-C-hHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE-V---R------TGK-P-S-PDIFLEAA  158 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~-~---~------~~k-p-~-~~~~~~~~  158 (313)
                      +.|.+.+.+   ++.|. .+++|.+++..++....+.+|+    |.+++.+- +   +      .+. . . .+-..++-
T Consensus       111 l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~  182 (497)
T PLN02177        111 VHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGA----DKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVL  182 (497)
T ss_pred             cCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCC----CEEEecccEECcCCEEeeeecCCCCCccHHHHHHHH
Confidence            666666544   55664 4999999999999888445788    55544331 0   0      000 0 1 11222232


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      +.+|.+... ++.||+.+|..+...++-..++-.
T Consensus       183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~  215 (497)
T PLN02177        183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMVPR  215 (497)
T ss_pred             HHhCCCCce-EEEECCccHHHHHHhCCccEEeCC
Confidence            445544444 899999999999999998754433

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.20  E-value=9.9e-06  Score=59.47  Aligned_cols=115  Identities=12%  Similarity=0.180  Sum_probs=88.9

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      .-.+++.+.+.+++|++. +.++++|+....++...+ +..|+..  +.++.+       .+++.-.++++.++-+.+.|
T Consensus        28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~~--~rv~a~-------a~~e~K~~ii~eLkk~~~k~   96 (152)
T COG4087          28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIPV--ERVFAG-------ADPEMKAKIIRELKKRYEKV   96 (152)
T ss_pred             CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCce--eeeecc-------cCHHHHHHHHHHhcCCCcEE
Confidence            346889999999999999 999999988888887776 7777632  333332       34577778888888778999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +||||+.||+.+.+++...++.+............++.++++..+.
T Consensus        97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~  142 (152)
T COG4087          97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEI  142 (152)
T ss_pred             EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHH
Confidence            9999999999999999998888876444444445678888777653

>PLN02382 probable sucrose-phosphatase

Probab=98.19  E-value=4e-05  Score=69.77  Aligned_cols=48  Identities=19%  Similarity=0.133  Sum_probs=40.6

Q ss_pred             CCCCChHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcC-CeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG-MEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~---~~~~~~~i~vgD~~~Di~~a~~~G-~~~i~v~~  193 (313)
                      .+-.+...++.+++++   |+++++++++||+.||++|.+.+| ..+++-+.
T Consensus       172 ~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA  223 (413)
T PLN02382        172 QGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA  223 (413)
T ss_pred             CCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence            4555678999999998   999999999999999999999999 56655443

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.16  E-value=1.8e-05  Score=67.06  Aligned_cols=47  Identities=21%  Similarity=0.164  Sum_probs=37.0

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .+-.+...++.+++++++++++++++|||.||+.|. ..+...++|..
T Consensus       162 ~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N  208 (247)
T PF05116_consen  162 KGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN  208 (247)
T ss_dssp             TT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred             CCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence            555677899999999999999999999999999999 66666667655

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.16  E-value=9.1e-06  Score=80.82  Aligned_cols=89  Identities=17%  Similarity=0.170  Sum_probs=71.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      .+++|++.+.++.|++.|++++++|+......+... +++|+..+    +..-       .|+...+++++++.++++++
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~----~~~~-------~p~~K~~~i~~l~~~~~~v~  716 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEV----IAGV-------LPDGKAEAIKRLQSQGRQVA  716 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEE----EeCC-------CHHHHHHHHHHHhhcCCEEE
Confidence            367899999999999999999999999998888777 88999543    3221       12334556667777788999


Q ss_pred             EEecCHhhHHHHHHcCCeEEE
Q 021360          170 VIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ||||+.||+.+++.+|+.+.+
T Consensus       717 ~vGDg~nD~~al~~Agvgia~  737 (834)
T PRK10671        717 MVGDGINDAPALAQADVGIAM  737 (834)
T ss_pred             EEeCCHHHHHHHHhCCeeEEe
Confidence            999999999999999995544

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.13  E-value=9.1e-06  Score=81.17  Aligned_cols=115  Identities=20%  Similarity=0.196  Sum_probs=86.2

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----------------CCCCChHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  154 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----------------~~kp~~~~~  154 (313)
                      +++|++.+.++.|++.|+++.++|+.......... +..|+...++.++.+.+..                .....|+..
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K  606 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK  606 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence            67899999999999999999999999999988777 8899987666665554332                223556666


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceee
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI  208 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii  208 (313)
                      ..+.+.++-..+.+.|+||+.||..+.++|++.+.+-..+  .+.....|+.++
T Consensus       607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g--~~va~~aaDivl  658 (884)
T TIGR01522       607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTG--TDVAKEAADMIL  658 (884)
T ss_pred             HHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCc--CHHHHHhcCEEE
Confidence            7777766666788999999999999999999765442111  111233567776

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.11  E-value=6e-05  Score=64.26  Aligned_cols=47  Identities=15%  Similarity=0.008  Sum_probs=34.2

Q ss_pred             CCCChHHHHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          147 GKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~--~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ..++...++.+.+.+.-  .+-.++.+||++||+.|.+.+.+.+++-.+
T Consensus       206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~~~  254 (302)
T PRK12702        206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLPSP  254 (302)
T ss_pred             CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEecCC
Confidence            33455666666665543  344789999999999999999998766433

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=98.11  E-value=0.00029  Score=59.71  Aligned_cols=105  Identities=15%  Similarity=0.234  Sum_probs=73.0

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHH--hhcCCcc--c-c--ceEE-----ec--C---------CCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNE--S-F--SVIV-----GS--D---------EVR  145 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~--~~~~~~~--~-f--~~v~-----~~--~---------~~~  145 (313)
                      .-...+.+.+++..|++.|+++..+|..+.......+.  ..+|+.-  . |  +..+     ..  .         -+.
T Consensus        79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft  158 (252)
T PF11019_consen   79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT  158 (252)
T ss_pred             eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence            34456789999999999999999999888766544441  4455421  1 0  0001     00  0         012


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHH----HHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----GKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~----a~~~G~~~i~v~~  193 (313)
                      .+..+.+.+..++.+.|..|+.+|||+|+..++..    ++..|+..+.+--
T Consensus       159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y  210 (252)
T PF11019_consen  159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY  210 (252)
T ss_pred             CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence            45566799999999999999999999999987765    5667888777654

The function is not known.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=98.08  E-value=0.0002  Score=67.84  Aligned_cols=47  Identities=6%  Similarity=-0.020  Sum_probs=41.2

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEEeCC
Q 021360          147 GKPSPDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~~~~~~i~v--gD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +-.+...++.+++.++++.++++.|  ||+.||+.|.+.+|..+++-.+
T Consensus       611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~  659 (694)
T PRK14502        611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP  659 (694)
T ss_pred             CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence            4556688999999999999999998  9999999999999998877554

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.95  E-value=9.7e-06  Score=67.73  Aligned_cols=101  Identities=16%  Similarity=0.166  Sum_probs=59.8

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHH---HHHHHhhcCCccccceEEecCCCCCC---CCChHHHHHHHHHcCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQHGWNESFSVIVGSDEVRTG---KPSPDIFLEAAKRLNM  163 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~~~~~~~f~~v~~~~~~~~~---kp~~~~~~~~~~~~~~  163 (313)
                      .+..|++.++++.+.+.|+.++++|+.+....   ...| ...|....-..++-+......   ......-+..+.+.|+
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy  192 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY  192 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence            47889999999999999999999999876533   2334 556754432333333222111   1112333333444333


Q ss_pred             CCCcEEEEecCHhhHHHHHHc---CCeEEEeCC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAA---GMEVVAVPS  193 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~---G~~~i~v~~  193 (313)
                      .  =+++|||..+|+..++..   +.+++..+.
T Consensus       193 ~--Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPN  223 (229)
T PF03767_consen  193 R--IIANIGDQLSDFSGAKTAGARAERWFKLPN  223 (229)
T ss_dssp             E--EEEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred             c--EEEEeCCCHHHhhcccccccccceEEEcCC
Confidence            3  267799999999984333   344555443

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.90  E-value=0.00018  Score=60.59  Aligned_cols=102  Identities=12%  Similarity=0.148  Sum_probs=61.7

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHH---HHHHHhhcCCccccceEEecCCCCCCCCChHHHH----HHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL----EAAKR  160 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~----~~~~~  160 (313)
                      ...+..|++.++.+.+++.|+.++++|+.++..-   ...| ...|...+ +.++....-...+.+...++    ..+.+
T Consensus       142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~  219 (275)
T TIGR01680       142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ  219 (275)
T ss_pred             ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH
Confidence            4678899999999999999999999999986543   2233 45666533 55555432211222212222    11122


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      -|+  .=+..|||..+|+......+-++...+.
T Consensus       220 eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPN  250 (275)
T TIGR01680       220 EGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPN  250 (275)
T ss_pred             cCc--eEEEEECCCHHhccCCCccCcceecCCC
Confidence            222  2346689999999665532356666655

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=97.89  E-value=3.4e-06  Score=66.56  Aligned_cols=92  Identities=18%  Similarity=0.211  Sum_probs=61.2

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCC-ccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~-~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .+..+||+.++|+.+.+. +.+++.|.+.+.++..++ +.+.- ...|+.++..+.+...+...   .+-+..++.+.++
T Consensus        34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~~---~KdL~~l~~~~~~  108 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGSY---IKDLSKLGRDLDN  108 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTEE---E--GGGSSS-GGG
T ss_pred             eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhcccccccccccccccccccc---ccchHHHhhcccc
Confidence            356789999999999766 999999999999998888 55555 45678888777664222211   1445566778999


Q ss_pred             EEEEecCHhhHHHHHHcC
Q 021360          168 SLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G  185 (313)
                      +++|+|++.-...-...+
T Consensus       109 vvivDD~~~~~~~~~~N~  126 (159)
T PF03031_consen  109 VVIVDDSPRKWALQPDNG  126 (159)
T ss_dssp             EEEEES-GGGGTTSGGGE
T ss_pred             EEEEeCCHHHeeccCCce
Confidence            999999987543333333

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.86  E-value=0.00014  Score=56.53  Aligned_cols=96  Identities=17%  Similarity=0.158  Sum_probs=65.1

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .+.+-++++++-...+|-.++++|+..+..   +...|++.+.+......++.++.-   ||..-.-..++...++.   
T Consensus       114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~---k~~qy~Kt~~i~~~~~~---  187 (237)
T COG3700         114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP---KPGQYTKTQWIQDKNIR---  187 (237)
T ss_pred             chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC---CcccccccHHHHhcCce---
Confidence            344557788888899999999999876543   334455667775554566666432   33222223344444554   


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                       ++.||+.+|+.+|+++|.+-+-+-+
T Consensus       188 -IhYGDSD~Di~AAkeaG~RgIRilR  212 (237)
T COG3700         188 -IHYGDSDNDITAAKEAGARGIRILR  212 (237)
T ss_pred             -EEecCCchhhhHHHhcCccceeEEe
Confidence             8999999999999999998777655

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.82  E-value=0.00013  Score=71.41  Aligned_cols=88  Identities=16%  Similarity=0.129  Sum_probs=67.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -+++|++.+.+++|++.|++++++|+.......... +.+|+..++      .    ..  |+.-..++++++ .+..|+
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~------~----~~--p~~K~~~v~~l~-~~~~v~  632 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRA------G----LL--PEDKVKAVTELN-QHAPLA  632 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeec------C----CC--HHHHHHHHHHHh-cCCCEE
Confidence            378999999999999999999999999999888777 889984221      1    11  222333444444 346899


Q ss_pred             EEecCHhhHHHHHHcCCeEEEe
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      |+||+.||..+++.+++.+.+-
T Consensus       633 mvGDgiNDapAl~~A~vgia~g  654 (741)
T PRK11033        633 MVGDGINDAPAMKAASIGIAMG  654 (741)
T ss_pred             EEECCHHhHHHHHhCCeeEEec
Confidence            9999999999999999766553

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.68  E-value=0.00051  Score=61.73  Aligned_cols=93  Identities=19%  Similarity=0.208  Sum_probs=73.3

Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----CCCCChHHHHHHHHHcCCCCCcEE
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----TGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      ....+.+..|+++|+-++++|-.....++....++.      +.++--+++.    +..|+.+.++++++++++..+..+
T Consensus       258 k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmv  331 (574)
T COG3882         258 KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMV  331 (574)
T ss_pred             HHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceE
Confidence            345578889999999999999888888887774443      5555544443    677889999999999999999999


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCC
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +++|++...+--+.-+- +.+++-
T Consensus       332 FiDD~p~ErE~vk~~~~-v~Vi~~  354 (574)
T COG3882         332 FIDDNPAERELVKRELP-VSVIEF  354 (574)
T ss_pred             EecCCHHHHHHHHhcCc-eeeccC
Confidence            99999998888777775 444443

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=97.59  E-value=0.00067  Score=52.24  Aligned_cols=95  Identities=16%  Similarity=0.117  Sum_probs=58.4

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      +..+..++...|..+++. .+++.+|....++.+..-.-...-...++.+...+.  ..|      ..+.+.+.++    
T Consensus        70 e~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~id----  136 (194)
T COG5663          70 EALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNID----  136 (194)
T ss_pred             HHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc--ccc------chhhHhhccC----
Confidence            344556788889999888 678888877666543222111111122344332211  111      2344566677    


Q ss_pred             EEEecCH-hhHHHHHHcCCeEEEeCCCCC
Q 021360          169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       169 i~vgD~~-~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      +++.|+. |-.+.|+.+|++++.+++...
T Consensus       137 lf~ed~~~na~~iAk~~~~~vilins~yn  165 (194)
T COG5663         137 LFFEDSHDNAGQIAKNAGIPVILINSPYN  165 (194)
T ss_pred             ccccccCchHHHHHHhcCCcEEEecCccc
Confidence            8899998 567778889999999998543

>PLN02423 phosphomannomutase

Probab=97.54  E-value=3.1e-05  Score=65.61  Aligned_cols=43  Identities=9%  Similarity=-0.164  Sum_probs=35.1

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD----~~~Di~~a~~~G~~~i~v~~  193 (313)
                      .+-.+...++.++     +++++++|||    +.||++|.+.-|+.++.|..
T Consensus       186 ~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~  232 (245)
T PLN02423        186 QGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS  232 (245)
T ss_pred             CCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence            4444556666665     8999999999    69999999999998888866

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=97.49  E-value=0.00064  Score=65.32  Aligned_cols=89  Identities=13%  Similarity=0.120  Sum_probs=68.7

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ++.|++.+.+++|++.|+++.++|+.......... +.+|+.    .++..     .  .|+.-..+.+++.-..+.+.|
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~----~v~a~-----~--~PedK~~~v~~lq~~g~~Vam  513 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVD----DFIAE-----A--TPEDKIALIRQEQAEGKLVAM  513 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCC----EEEcC-----C--CHHHHHHHHHHHHHcCCeEEE
Confidence            77899999999999999999999999988888777 889994    33321     2  234444444444334457999


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +||+.||..+.+.+++.+.+-
T Consensus       514 vGDG~NDapAL~~AdvGiAm~  534 (675)
T TIGR01497       514 TGDGTNDAPALAQADVGVAMN  534 (675)
T ss_pred             ECCCcchHHHHHhCCEeEEeC
Confidence            999999999999999976654

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PLN02645 phosphoglycolate phosphatase

Probab=97.49  E-value=0.001  Score=58.48  Aligned_cols=90  Identities=16%  Similarity=0.141  Sum_probs=67.1

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .++||+.++|++|++.|++++++||++...   +...+ +.+|+...++.++++.         ......++..++...+
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~---------~~~~~~l~~~~~~~~~  113 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSS---------FAAAAYLKSINFPKDK  113 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehH---------HHHHHHHHhhccCCCC
Confidence            367899999999999999999999987333   33345 6688876667776653         2445555665665555


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEE
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      .++++++..+.+.++.+|+.++.
T Consensus       114 ~V~viG~~~~~~~l~~~Gi~~~~  136 (311)
T PLN02645        114 KVYVIGEEGILEELELAGFQYLG  136 (311)
T ss_pred             EEEEEcCHHHHHHHHHCCCEEec
Confidence            67888888899999999998654

>PTZ00174 phosphomannomutase; Provisional

Probab=97.49  E-value=0.00026  Score=60.13  Aligned_cols=30  Identities=13%  Similarity=0.324  Sum_probs=22.2

Q ss_pred             HHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           96 ANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        96 v~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      ..+.|+++++.|+.++++|+.+...+...+
T Consensus        27 ~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l   56 (247)
T PTZ00174         27 MKDTLAKLKSKGFKIGVVGGSDYPKIKEQL   56 (247)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence            346677888888888888888777665444

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=97.46  E-value=0.00044  Score=69.54  Aligned_cols=116  Identities=16%  Similarity=0.090  Sum_probs=79.6

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc----ceEEecCCC----------------CCCCCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEV----------------RTGKPS  150 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f----~~v~~~~~~----------------~~~kp~  150 (313)
                      +++|++.+.++.+++.|+++.++|+.......... +..|+...-    ...+.+.+.                -..+..
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~  615 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE  615 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence            67899999999999999999999998888777666 778875311    112222111                012233


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      |+.-.++.+.++-..+.+.|+||+.||+.|.+.+++.+.+- .+  .+.....|+.++.+
T Consensus       616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g--~~~ak~aAD~vl~d  672 (917)
T TIGR01116       616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG--TEVAKEASDMVLAD  672 (917)
T ss_pred             HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC--cHHHHHhcCeEEcc
Confidence            45556666666656678889999999999999999965443 32  22223357777655

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.43  E-value=0.0025  Score=52.28  Aligned_cols=85  Identities=14%  Similarity=0.202  Sum_probs=54.7

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHH-HH---HHHHhhcCCccccc-eEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT-IE---SKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~-~~---~~l~~~~~~~~~f~-~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      ....+.||+.+++...-+.|..+..+||...+. ..   .-| .+.|+...-+ .++.-   ...+++...++. .++  
T Consensus       119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~-v~k--  191 (274)
T COG2503         119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQA-VEK--  191 (274)
T ss_pred             cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHH-Hhh--
Confidence            356889999999999999999999999997765 22   233 4556643222 22222   123333333333 333  


Q ss_pred             CCCCcEEEEecCHhhHHH
Q 021360          163 MEPSSSLVIEDSVIGVVA  180 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~  180 (313)
                       ..+-++.|||+..|...
T Consensus       192 -~~~iVm~vGDNl~DF~d  208 (274)
T COG2503         192 -DYKIVMLVGDNLDDFGD  208 (274)
T ss_pred             -ccceeeEecCchhhhcc
Confidence             55568889999987654

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.41  E-value=0.0011  Score=49.62  Aligned_cols=31  Identities=13%  Similarity=0.249  Sum_probs=25.7

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATI  121 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~  121 (313)
                      .+.+++.+.|+.+++.|+.++++|+.+....
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~   54 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRTY   54 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence            4566788999999999999999998876644

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=97.37  E-value=0.0015  Score=62.88  Aligned_cols=89  Identities=11%  Similarity=0.092  Sum_probs=71.4

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ++.|++.+.+++|++.|+++.++|+.......... +.+|+.    .++.       .-.|+.-.++.+.+.-.-+.+.|
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~----~v~A-------~~~PedK~~iV~~lQ~~G~~VaM  508 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVD----RFVA-------ECKPEDKINVIREEQAKGHIVAM  508 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCc----eEEc-------CCCHHHHHHHHHHHHhCCCEEEE
Confidence            78899999999999999999999999988888777 889994    3332       22446666666666555567999


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +||+.||..+.+++.+.+.+-
T Consensus       509 tGDGvNDAPALa~ADVGIAMg  529 (673)
T PRK14010        509 TGDGTNDAPALAEANVGLAMN  529 (673)
T ss_pred             ECCChhhHHHHHhCCEEEEeC
Confidence            999999999999999876554

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=97.34  E-value=0.0015  Score=63.05  Aligned_cols=89  Identities=15%  Similarity=0.135  Sum_probs=71.0

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ++.|++.+.+++|++.|+++.++|+.......... +..|++    .++.       .-.|+.-.++.+++.-.-+-+.|
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId----~v~A-------~~~PedK~~iV~~lQ~~G~~VaM  512 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVD----DFLA-------EATPEDKLALIRQEQAEGRLVAM  512 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCc----EEEc-------cCCHHHHHHHHHHHHHcCCeEEE
Confidence            67899999999999999999999999988888777 889994    3332       22345556666665555567999


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +||+.||..+.+++.+.+.+-
T Consensus       513 tGDGvNDAPALa~ADVGIAMg  533 (679)
T PRK01122        513 TGDGTNDAPALAQADVGVAMN  533 (679)
T ss_pred             ECCCcchHHHHHhCCEeEEeC
Confidence            999999999999999876655

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.25  E-value=0.00098  Score=67.32  Aligned_cols=100  Identities=15%  Similarity=0.059  Sum_probs=73.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----------------CCCCChHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  154 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----------------~~kp~~~~~  154 (313)
                      ++.|++.+.++.|++.|+++.++|+.....+.... +..|+...-..++.+.+..                ...-.|+.-
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K  657 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK  657 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence            67899999999999999999999999988887776 8888854322344433211                123344555


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .++.+.+.-.-+.+.|+||+.||..|.++|.+.+.+-
T Consensus       658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg  694 (941)
T TIGR01517       658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMG  694 (941)
T ss_pred             HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecC
Confidence            5555555444567999999999999999999876543

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.22  E-value=0.0017  Score=62.77  Aligned_cols=91  Identities=19%  Similarity=0.202  Sum_probs=69.9

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++.+.+++|++.|+++.++|+..+...+... +.+|++    .++..     -.  |+.-.+..+++.-+-..+.
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId----~v~Ae-----ll--PedK~~~V~~l~~~g~~Va  603 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGID----EVRAE-----LL--PEDKAEIVRELQAEGRKVA  603 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChH----hhecc-----CC--cHHHHHHHHHHHhcCCEEE
Confidence            478899999999999999999999999988888777 889994    33321     12  2444445555554447899


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeC
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      ||||+.||-.+...+.+.+.+-.
T Consensus       604 mVGDGINDAPALA~AdVGiAmG~  626 (713)
T COG2217         604 MVGDGINDAPALAAADVGIAMGS  626 (713)
T ss_pred             EEeCCchhHHHHhhcCeeEeecC
Confidence            99999999999999998655443

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=97.20  E-value=0.00094  Score=65.76  Aligned_cols=97  Identities=16%  Similarity=0.135  Sum_probs=72.1

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC----------------------CCCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGK  148 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~----------------------~~~k  148 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+...   ++.+++.                      -..+
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr  517 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAE  517 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence            67899999999999999999999999988888777 88898531   2221111                      0122


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      -.|+.-.++.+.+.-.-+.+.|+||+.||..+.+.+.+.+.+-
T Consensus       518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~  560 (755)
T TIGR01647       518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA  560 (755)
T ss_pred             cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec
Confidence            3445555566655555677999999999999999999876653

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.19  E-value=0.0015  Score=66.42  Aligned_cols=116  Identities=11%  Similarity=0.086  Sum_probs=79.9

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccc----------cceEEecCCCC---------------
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES----------FSVIVGSDEVR---------------  145 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~----------f~~v~~~~~~~---------------  145 (313)
                      ++.|++.+.++.+++.|++++++|+.......... +..|+...          -..++.+.+..               
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~  724 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL  724 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence            67899999999999999999999999988887777 78888532          12344443321               


Q ss_pred             -CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          146 -TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       146 -~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                       ...-.|+.-.++.+.+.-..+.+.|+||+.||..|.+.+++.+.+-..+.+  .....|+.++.
T Consensus       725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~--vak~aADivl~  787 (1053)
T TIGR01523       725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSD--VAKDASDIVLS  787 (1053)
T ss_pred             EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccH--HHHHhcCEEEe
Confidence             122344555555555544556789999999999999999987665322222  12335666654

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.15  E-value=0.0021  Score=54.16  Aligned_cols=52  Identities=15%  Similarity=0.249  Sum_probs=45.2

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      ..|.+.+.|.+|++.|.-+++=|-+.++++...+ +.+++..+|+.++++...
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G~~  194 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGGNK  194 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCCcc
Confidence            3456778899999999999999999999999999 889999999999997643

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=97.13  E-value=0.0018  Score=64.83  Aligned_cols=98  Identities=9%  Similarity=0.062  Sum_probs=71.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----------------CCCCChHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  154 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----------------~~kp~~~~~  154 (313)
                      ++.|++.+.++.+++.|+++.++|+.......... +..|+..  +.++.+.+..                ...-.|+.-
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K  591 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQK  591 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence            57899999999999999999999998888887666 8889852  2333332221                122334555


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .++.+.+.-.-+.+.|+||+.||..+.+.|.+.+.+-
T Consensus       592 ~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg  628 (867)
T TIGR01524       592 SRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD  628 (867)
T ss_pred             HHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC
Confidence            5555555445567999999999999999999976654

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=97.13  E-value=0.0014  Score=65.73  Aligned_cols=98  Identities=12%  Similarity=0.108  Sum_probs=73.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----------------CCCCChHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  154 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----------------~~kp~~~~~  154 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+..  +.++.+.+..                ...-.|+.-
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K  626 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHK  626 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence            56899999999999999999999999888887766 8889852  2344443321                122345555


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .++.+.+.-.-+-+.|+||+.||..+.+++.+.+.+-
T Consensus       627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg  663 (902)
T PRK10517        627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD  663 (902)
T ss_pred             HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC
Confidence            5555655545567899999999999999999876654

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.11  E-value=0.0017  Score=52.49  Aligned_cols=94  Identities=11%  Similarity=0.042  Sum_probs=57.7

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc--ccceEEecCCCC-------CCCCC-hHHHHHHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIVGSDEVR-------TGKPS-PDIFLEAAKR  160 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~--~f~~v~~~~~~~-------~~kp~-~~~~~~~~~~  160 (313)
                      ...|++.++|+.+.+. |.++|.|.+...+++.++ ..+++..  .+...+.-+.+.       ...+. ...+..+-.+
T Consensus        45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~  122 (195)
T TIGR02245        45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWAL  122 (195)
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhh
Confidence            4789999999999995 999999999999999888 6555422  112111111110       01110 1112223234


Q ss_pred             cC--CCCCcEEEEecCHhhHHHHHHcCC
Q 021360          161 LN--MEPSSSLVIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       161 ~~--~~~~~~i~vgD~~~Di~~a~~~G~  186 (313)
                      ++  ++.+++++|+|++.-..+--..|+
T Consensus       123 l~~~~~~~ntiiVDd~p~~~~~~P~N~i  150 (195)
T TIGR02245       123 LPEFYSMKNTIMFDDLRRNFLMNPQNGL  150 (195)
T ss_pred             cccCCCcccEEEEeCCHHHHhcCCCCcc
Confidence            43  478999999999976555444454

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=97.07  E-value=0.0048  Score=60.73  Aligned_cols=38  Identities=13%  Similarity=-0.067  Sum_probs=31.1

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G  185 (313)
                      .+-.+...++.+++  +++++.++++||+.||..|.+.++
T Consensus       654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~  691 (726)
T PRK14501        654 AGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALP  691 (726)
T ss_pred             CCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence            33445677888777  788999999999999999999874

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.04  E-value=0.0089  Score=46.40  Aligned_cols=93  Identities=20%  Similarity=0.245  Sum_probs=55.5

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHH---HHHHHhhc-----CCccccceEEecCC-------CCCCCCChHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQH-----GWNESFSVIVGSDE-------VRTGKPSPDIFLE  156 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~---~~~l~~~~-----~~~~~f~~v~~~~~-------~~~~kp~~~~~~~  156 (313)
                      ..||+.++++.+++.||++..+|..+....   +..| ...     ++..  --++.+.+       -..-..+|+.|+.
T Consensus        28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L-~~~~q~~~~lP~--Gpv~~sP~~l~~al~rEvi~~~p~~fK~  104 (157)
T PF08235_consen   28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL-AQHQQQGHNLPD--GPVLLSPDSLFSALHREVISKDPEEFKI  104 (157)
T ss_pred             hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH-HHHHhCCccCCC--CCEEECCcchhhhhhccccccChHHHHH
Confidence            456999999999999999999999875432   3344 322     2221  12222211       0111234555555


Q ss_pred             HHH-Hc--CCCC-Cc--EEEEecCHhhHHHHHHcCCe
Q 021360          157 AAK-RL--NMEP-SS--SLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       157 ~~~-~~--~~~~-~~--~i~vgD~~~Di~~a~~~G~~  187 (313)
                      .+. .+  -+++ ..  ...+|+..+|+.+=+++|++
T Consensus       105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence            443 21  1221 22  34489999999999999986

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=97.02  E-value=0.0022  Score=64.41  Aligned_cols=98  Identities=14%  Similarity=0.086  Sum_probs=73.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC----------------CCCCChHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF  154 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~----------------~~kp~~~~~  154 (313)
                      ++.|++.+.++.+++.|+++.++|+.......... +.+|+..  +.++.+.+..                ...-.|+.-
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K  626 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK  626 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence            67899999999999999999999999888887766 8889852  2333333221                122345555


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .++.+.+.-.-+-+.|+||+.||..+.+.+.+.+.+-
T Consensus       627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg  663 (903)
T PRK15122        627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD  663 (903)
T ss_pred             HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC
Confidence            6666665545567999999999999999999876554

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=96.99  E-value=0.032  Score=48.36  Aligned_cols=104  Identities=14%  Similarity=0.244  Sum_probs=74.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHh--hcCCccccceEEecCCCC-----CCCC-------------
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVR-----TGKP-------------  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~--~~~~~~~f~~v~~~~~~~-----~~kp-------------  149 (313)
                      +.-.|....+++.|++.|.++.++||++-.++..-+.-  .-.+.+.||+|++-.+-+     ..+|             
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~w  318 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLW  318 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhh
Confidence            34457888999999999999999999999998765521  123556788887643211     1111             


Q ss_pred             ---------C---hHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEeCC
Q 021360          150 ---------S---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS  193 (313)
Q Consensus       150 ---------~---~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~-~~G~~~i~v~~  193 (313)
                               +   ...+...++-.|..-.+++++||.. +|+.... +.|+++..+.+
T Consensus       319 dkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~  376 (510)
T KOG2470|consen  319 DKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP  376 (510)
T ss_pred             hhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence                     0   1124555666678888999999999 7998876 99999877766

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.98  E-value=0.0025  Score=64.03  Aligned_cols=105  Identities=15%  Similarity=0.122  Sum_probs=78.8

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc--eEEecCCCC----------------CCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR----------------TGKPS  150 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~--~v~~~~~~~----------------~~kp~  150 (313)
                      .-++.|++.+.++.+++.|+++.++|+-......... +..|+...-.  .++.|.+..                ..+-.
T Consensus       545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs  623 (917)
T COG0474         545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS  623 (917)
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence            3578999999999999999999999999988887766 8888765442  355554322                22234


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      |+.-.++.+.+.-.-.-+.|.||+.||..|.++|.+.+.+...+
T Consensus       624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~G  667 (917)
T COG0474         624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG  667 (917)
T ss_pred             HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence            55555555555545667899999999999999999988776543

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.80  E-value=0.005  Score=62.60  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=70.6

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc------------------------ceEEecCCCC-
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEVR-  145 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f------------------------~~v~~~~~~~-  145 (313)
                      ++.|++.+.++++++.|+++.++|+.....+.... +..|+...-                        ..++.|.+.. 
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~  646 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD  646 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence            67889999999999999999999999988887776 777773210                        1244443221 


Q ss_pred             -----------------CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          146 -----------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       146 -----------------~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                                       ..+-.|+.-.++.+.+.-...-+.|+||+.||..|.+.+.+.+.+-
T Consensus       647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg  709 (997)
T TIGR01106       647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG  709 (997)
T ss_pred             CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecC
Confidence                             1223344444444444434456899999999999999999876553

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=96.76  E-value=0.018  Score=52.87  Aligned_cols=81  Identities=11%  Similarity=0.011  Sum_probs=48.2

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC--------CC--CCCCChHH-HHHHHHHcCCCCCc
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------VR--TGKPSPDI-FLEAAKRLNMEPSS  167 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~--------~~--~~kp~~~~-~~~~~~~~~~~~~~  167 (313)
                      .++.++..| +.+++|.+++.+++..+.+.+|.    |.|++.+-        .+  .++...+. ..++.+.++ +...
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~  174 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFV-DERP  174 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhC-ccCc
Confidence            455667777 89999999999999999666888    55543321        00  11111222 333333344 3344


Q ss_pred             EEEEecCHhhHHHHHHcC
Q 021360          168 SLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G  185 (313)
                      .+-+||+..|..-..-+.
T Consensus       175 ~vg~~~~~~~~~f~~~ck  192 (498)
T PLN02499        175 QLGLGRISASSSFLSLCK  192 (498)
T ss_pred             eecccCCcccchhhhhCc
Confidence            677788776665554443

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=96.44  E-value=0.029  Score=47.83  Aligned_cols=53  Identities=26%  Similarity=0.448  Sum_probs=40.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccccceEEecCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDE  143 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~f~~v~~~~~  143 (313)
                      .++||+.++|+.|+++|.++.++||++...   ....|....++....+.++++..
T Consensus        24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~   79 (269)
T COG0647          24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGD   79 (269)
T ss_pred             ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHH
Confidence            688999999999999999999999996543   34455233566666677777653

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.44  E-value=0.018  Score=56.04  Aligned_cols=91  Identities=15%  Similarity=0.163  Sum_probs=68.2

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++...+..|++.|++++++|+......+... +..|+    +.|++.     -+|  +.-.+..+++.-+...+.
T Consensus       722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VGi----~~V~ae-----v~P--~~K~~~Ik~lq~~~~~Va  789 (951)
T KOG0207|consen  722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVGI----DNVYAE-----VLP--EQKAEKIKEIQKNGGPVA  789 (951)
T ss_pred             cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhCc----ceEEec-----cCc--hhhHHHHHHHHhcCCcEE
Confidence            478899999999999999999999999998888777 77885    666542     222  222333334444447899


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeC
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      |+||+.||-.+...+.+......
T Consensus       790 MVGDGINDaPALA~AdVGIaig~  812 (951)
T KOG0207|consen  790 MVGDGINDAPALAQADVGIAIGA  812 (951)
T ss_pred             EEeCCCCccHHHHhhccceeecc
Confidence            99999999999888877654443

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=96.41  E-value=0.033  Score=55.52  Aligned_cols=39  Identities=15%  Similarity=-0.011  Sum_probs=31.3

Q ss_pred             CCCChHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcC
Q 021360          147 GKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       147 ~kp~~~~~~~~~~---~~~~~~~~~i~vgD~~~Di~~a~~~G  185 (313)
                      +-.|...++.+++   .+|.+++.+++|||..+|..|.+.++
T Consensus       760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~  801 (854)
T PLN02205        760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT  801 (854)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence            3445567777764   46899999999999999999988876

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=96.27  E-value=0.025  Score=53.22  Aligned_cols=86  Identities=15%  Similarity=0.120  Sum_probs=65.2

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++.+.++.|++.|+++.++|+.......... +.+|+       +       ..-.|+.-.++.+++.-....+.
T Consensus       346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi-------~-------~~~~p~~K~~~v~~l~~~g~~v~  410 (499)
T TIGR01494       346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI-------F-------ARVTPEEKAALVEALQKKGRVVA  410 (499)
T ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc-------e-------eccCHHHHHHHHHHHHHCCCEEE
Confidence            378899999999999999999999999888877666 77775       1       11234444455554433447799


Q ss_pred             EEecCHhhHHHHHHcCCeEEE
Q 021360          170 VIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ++||+.||..+.+.+++.+.+
T Consensus       411 ~vGDg~nD~~al~~Advgia~  431 (499)
T TIGR01494       411 MTGDGVNDAPALKKADVGIAM  431 (499)
T ss_pred             EECCChhhHHHHHhCCCcccc
Confidence            999999999999999876444

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.17  E-value=0.018  Score=51.71  Aligned_cols=98  Identities=17%  Similarity=0.126  Sum_probs=81.0

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCC--chHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           93 LPGANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~--~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      .....++.+.+.+.+.+++++|.-  |...++..| ...|.+-+---++.+.+....|-+...|..++..-++++.+.++
T Consensus       101 n~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H  179 (635)
T COG5610         101 NKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWIH  179 (635)
T ss_pred             cccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheEE
Confidence            345678899999999999999976  566677777 66776544445778888888888899999999999999999999


Q ss_pred             EecCH-hhHHHHHHcCCeEEEe
Q 021360          171 IEDSV-IGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~-~Di~~a~~~G~~~i~v  191 (313)
                      +||+. .|+.++++.|+.+...
T Consensus       180 ~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         180 CGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             ecCchhhhhcCccccchhHHHH
Confidence            99999 6999999999976544

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=96.14  E-value=0.019  Score=55.44  Aligned_cols=104  Identities=15%  Similarity=0.109  Sum_probs=76.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc----eEEecCCCC----------------CCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVR----------------TGKP  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~----~v~~~~~~~----------------~~kp  149 (313)
                      -+|+|++.+.++.+++.|+++.++|+.......... ++.|+...-+    ..+++.++.                ...-
T Consensus       583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~  661 (972)
T KOG0202|consen  583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA  661 (972)
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence            478999999999999999999999999999888777 7788754433    344443322                1112


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      .|.--.++.+.+.-..+=+.|-||+.||-.+.+.+.+.+.+-..+
T Consensus       662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~G  706 (972)
T KOG0202|consen  662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISG  706 (972)
T ss_pred             CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCc
Confidence            344455566666556677889999999999999999876665443

>TIGR00685 T6PP trehalose-phosphatase

Probab=96.03  E-value=0.011  Score=49.93  Aligned_cols=62  Identities=15%  Similarity=0.034  Sum_probs=46.8

Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCeEEEeCCCCCccccccccceeecccccc
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~-------G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      .+...++.+++++++++++++++||+.+|+.+++.+       |...+.+..+    .....+++++++..+.
T Consensus       167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~v  235 (244)
T TIGR00685       167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQV  235 (244)
T ss_pred             CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHHH
Confidence            345899999999999999999999999999999988       5556666432    1223466777766553

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=96.00  E-value=0.091  Score=42.95  Aligned_cols=41  Identities=20%  Similarity=0.181  Sum_probs=32.9

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW  131 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~  131 (313)
                      ...+.||+.+.++.+.+. .+-+++|.+..+++++.. ...|+
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~  121 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV  121 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence            367899999999999887 777888888888887665 55555

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=95.97  E-value=0.072  Score=54.78  Aligned_cols=42  Identities=14%  Similarity=0.143  Sum_probs=36.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  132 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~  132 (313)
                      -++.|++.+.++.|++.|+++.++|+.....+.... +..|+.
T Consensus       655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii  696 (1054)
T TIGR01657       655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIV  696 (1054)
T ss_pred             cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCC
Confidence            368899999999999999999999999888887766 777874

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.97  E-value=0.069  Score=46.18  Aligned_cols=88  Identities=19%  Similarity=0.226  Sum_probs=58.9

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchH---HHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .++|++.++|++|++.|.+++++||++..   .....+ +++|+....+.++++.         .....++++......+
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~   87 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKA   87 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCE
Confidence            46789999999999999999999986532   223345 6677754444444432         3444555554445678


Q ss_pred             EEEEecCHhhHHHHHHcCCeEE
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVV  189 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i  189 (313)
                      ++++|+. .-....+.+|+..+
T Consensus        88 v~~iG~~-~~~~~l~~~g~~~~  108 (279)
T TIGR01452        88 VYVIGEE-GLRAELDAAGIRLA  108 (279)
T ss_pred             EEEEcCH-HHHHHHHHCCCEEe
Confidence            9999985 33455677888754

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=95.58  E-value=0.038  Score=47.42  Aligned_cols=41  Identities=7%  Similarity=0.114  Sum_probs=33.6

Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc----CCeEEE
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA----GMEVVA  190 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~----G~~~i~  190 (313)
                      +...++++++.++++.++++++||+.||..|.+.+    |+.+.+
T Consensus       175 Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav  219 (266)
T PRK10187        175 KGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV  219 (266)
T ss_pred             HHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE
Confidence            45667888888899999999999999999999888    655433

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.48  E-value=0.16  Score=41.44  Aligned_cols=26  Identities=8%  Similarity=-0.001  Sum_probs=20.0

Q ss_pred             CCCc-EEEEecCHhhHHHHHHcCCeEE
Q 021360          164 EPSS-SLVIEDSVIGVVAGKAAGMEVV  189 (313)
Q Consensus       164 ~~~~-~i~vgD~~~Di~~a~~~G~~~i  189 (313)
                      ...+ ++.+||++||+.+.......++
T Consensus       207 ~~~r~t~~~GDg~nD~Pl~ev~d~Afi  233 (274)
T COG3769         207 GGARTTLGLGDGPNDAPLLEVMDYAFI  233 (274)
T ss_pred             CceeEEEecCCCCCcccHHHhhhhhee
Confidence            4444 7889999999999887766443

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.47  E-value=0.16  Score=38.83  Aligned_cols=101  Identities=15%  Similarity=0.102  Sum_probs=61.2

Q ss_pred             CCCCchHHHHHHHHHHC-C-CCEEEEeCCch------HH-HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           90 VKALPGANRLIKHLSCH-G-VPMALASNSHR------AT-IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~-g-~~~~i~s~~~~------~~-~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      ....|....-+++++.. | ..++++||+.-      +. ....++.+.|+    ..+  .....++-...+.+......
T Consensus        60 ~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gI----pVl--RHs~kKP~ct~E~~~y~~~N  133 (190)
T KOG2961|consen   60 LAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGI----PVL--RHSVKKPACTAEEVEYHFGN  133 (190)
T ss_pred             cccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCC----ceE--eecccCCCccHHHHHHHhCC
Confidence            45566666667777653 3 67888888732      11 22233455555    222  22222222233444443221


Q ss_pred             cC-CCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCC
Q 021360          161 LN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       161 ~~-~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      -. ..+++++||||.. .||.+|...|.-.++..++..
T Consensus       134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~  171 (190)
T KOG2961|consen  134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR  171 (190)
T ss_pred             cccCChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence            11 5789999999999 599999999999999988644

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=94.80  E-value=0.097  Score=53.90  Aligned_cols=122  Identities=16%  Similarity=0.147  Sum_probs=73.7

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc----------------------------------
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----------------------------------  135 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f----------------------------------  135 (313)
                      -++.|++.+.++.|++.|++++++|+...+.+.... ...|+...-                                  
T Consensus       630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~  708 (1057)
T TIGR01652       630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNN  708 (1057)
T ss_pred             hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhh
Confidence            478899999999999999999999988777766554 444442210                                  


Q ss_pred             -------ceEEecCCCC----------------------CCCCChHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcC
Q 021360          136 -------SVIVGSDEVR----------------------TGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       136 -------~~v~~~~~~~----------------------~~kp~~~~~~~~~~~~~~~-~~~~i~vgD~~~Di~~a~~~G  185 (313)
                             ..++.+....                      ..+-.|+.-.++.+.+.-. ...+.++||+.||+.|.++|.
T Consensus       709 ~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~Ad  788 (1057)
T TIGR01652       709 LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEAD  788 (1057)
T ss_pred             hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcC
Confidence                   1133332111                      1111222222233322222 467999999999999999999


Q ss_pred             CeEEEeCCCCCccccccccceeecccccc
Q 021360          186 MEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       186 ~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      +.+ .+.. .........||.++.++..+
T Consensus       789 VGI-gi~g-~eg~qA~~aaD~~i~~F~~L  815 (1057)
T TIGR01652       789 VGV-GISG-KEGMQAVMASDFAIGQFRFL  815 (1057)
T ss_pred             eee-EecC-hHHHHHHHhhhhhhhhHHHH
Confidence            876 3322 11111234677777765443

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=94.80  E-value=0.03  Score=42.00  Aligned_cols=137  Identities=12%  Similarity=0.208  Sum_probs=74.4

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh--
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD--   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   85 (313)
                      +.|.++.|||-||.|....|...+. +.+..+++.+.     ..|...        +.+-.+  ...   .+.+...+  
T Consensus         2 ~kk~iaIDmD~vLadll~ewv~~~N-~y~D~~lk~~d-----i~gwdi--------k~yv~~--~~g---~i~~il~ep~   62 (180)
T COG4502           2 NKKTIAIDMDTVLADLLREWVKRYN-IYKDKLLKMSD-----IKGWDI--------KNYVKP--ECG---KIYDILKEPH   62 (180)
T ss_pred             CCceEEeeHHHHHHHHHHHHHHHhh-hccccCcChHh-----hcccch--------hhccCc--cCC---eeeeeccCcc
Confidence            4578999999999987766655443 33333333211     111111        111000  000   01111111  


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCC--chHHHHH---HHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNS--HRATIES---KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~--~~~~~~~---~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      .+..+.+.|++.+.+++|.+. +.++++|..  .....+.   .+.+.+.+.++-..|+|+..-                
T Consensus        63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnKn----------------  125 (180)
T COG4502          63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNKN----------------  125 (180)
T ss_pred             hhhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCCC----------------
Confidence            235678899999999999987 899998866  2222221   233666666666677776321                


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHH
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKA  183 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~  183 (313)
                        + ...=++|+|++..++..+.
T Consensus       126 --i-vkaDilIDDnp~nLE~F~G  145 (180)
T COG4502         126 --I-VKADILIDDNPLNLENFKG  145 (180)
T ss_pred             --e-EEeeEEecCCchhhhhccC
Confidence              0 0112677888877766543

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=94.67  E-value=0.15  Score=45.15  Aligned_cols=95  Identities=16%  Similarity=0.225  Sum_probs=57.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCch------------HHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~------------~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      .++|.+..=|+.+.+.|+.+++.||...            ..++... ..+++  .|........-..+||...++....
T Consensus       104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~v--Pi~~~~A~~~~~yRKP~tGMwe~~~  180 (422)
T KOG2134|consen  104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGV--PIQLLAAIIKGKYRKPSTGMWEFLK  180 (422)
T ss_pred             eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCC--ceEEeeeccCCcccCcchhHHHHHH
Confidence            3555666778889999999999987642            1123333 33444  2233333233348899988887776


Q ss_pred             HHcC----CCCCcEEEEecC---------------HhhHHHHHHcCCeE
Q 021360          159 KRLN----MEPSSSLVIEDS---------------VIGVVAGKAAGMEV  188 (313)
Q Consensus       159 ~~~~----~~~~~~i~vgD~---------------~~Di~~a~~~G~~~  188 (313)
                      +..+    +.-..++++||-               ..|+..|.++|+..
T Consensus       181 ~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF  229 (422)
T KOG2134|consen  181 RLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKF  229 (422)
T ss_pred             HHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCcc
Confidence            5443    333445566652               24777788888764

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=94.63  E-value=0.041  Score=47.22  Aligned_cols=14  Identities=43%  Similarity=0.586  Sum_probs=12.2

Q ss_pred             cEEEEecCCccccC
Q 021360           10 SCVILDLDGTLLNT   23 (313)
Q Consensus        10 k~vifDlDGTL~d~   23 (313)
                      .+|+||+||||++.
T Consensus        15 ~li~~D~DGTLl~~   28 (266)
T PRK10187         15 YAWFFDLDGTLAEI   28 (266)
T ss_pred             EEEEEecCCCCCCC
Confidence            57899999999973

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=94.21  E-value=0.18  Score=49.13  Aligned_cols=116  Identities=16%  Similarity=0.115  Sum_probs=71.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc--eEEecCCCC----------------CCCCCh
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR----------------TGKPSP  151 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~--~v~~~~~~~----------------~~kp~~  151 (313)
                      -+.+||+.+.++.++..|+++-.+|+.+....++.. ...|+...=+  .+.-+.++.                .....|
T Consensus       646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP  724 (1034)
T KOG0204|consen  646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP  724 (1034)
T ss_pred             CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence            367899999999999999999999999988888766 6677654322  223332221                111122


Q ss_pred             HHHHHHHHHcCCCCCcEEE-EecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          152 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~-vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      ..-.-+.+.+. .-.+++. -||+.||-.+.++|.+...+--.+.+-.  +..||.++-
T Consensus       725 ~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA--KEaSDIIi~  780 (1034)
T KOG0204|consen  725 NDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA--KEASDIIIL  780 (1034)
T ss_pred             chHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhh--hhhCCeEEE
Confidence            11111222221 3345554 5999999999999998665544433222  235555543

>cd02169 Citrate_lyase_ligase Citrate lyase ligase

Probab=94.21  E-value=0.017  Score=50.14  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=25.4

Q ss_pred             HcCCeEEEeCCCCCccccccccceeeccccccCccc
Q 021360          183 AAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK  218 (313)
Q Consensus       183 ~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~  218 (313)
                      +.|+.+..+++... .....+|+.|++.|.+|+++.
T Consensus       250 ~~gf~v~~v~~~~~-~g~~ISST~IR~~l~~G~v~~  284 (297)
T cd02169         250 SPAIEVIEIERKKY-DGQPISASTVRQLLKEGNLEE  284 (297)
T ss_pred             cCCCEEEEeccccc-CCcEEcHHHHHHHHHcCCHHH
Confidence            34555777776433 444568899999999999888

Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.

>PLN03190 aminophospholipid translocase; Provisional

Probab=93.68  E-value=0.17  Score=52.38  Aligned_cols=49  Identities=20%  Similarity=0.210  Sum_probs=35.1

Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      .-++++||+.||+.|.++|.+.+ .+.. .+.......||..+..+..+..
T Consensus       872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG-~EG~qA~~aSDfaI~~Fr~L~r  920 (1178)
T PLN03190        872 DMTLAIGDGANDVSMIQMADVGV-GISG-QEGRQAVMASDFAMGQFRFLVP  920 (1178)
T ss_pred             cEEEEECCCcchHHHHHhcCeee-eecC-chhHHHHHhhccchhhhHHHHH
Confidence            45899999999999999998876 4332 2222234578888888776543

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=93.55  E-value=0.47  Score=39.82  Aligned_cols=94  Identities=17%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEe------------cCCCC----CCCCCh
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG------------SDEVR----TGKPSP  151 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~------------~~~~~----~~kp~~  151 (313)
                      ....+++|+.++++.|.+.++|+.++|.+-.+.++..+ ++.+....--.|++            ++.-.    ..|. .
T Consensus        87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn-~  164 (246)
T PF05822_consen   87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKN-E  164 (246)
T ss_dssp             S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HH-H
T ss_pred             cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCC-c
Confidence            35789999999999999999999999999999999888 44454322112222            11100    1111 1


Q ss_pred             HHHH--HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 021360          152 DIFL--EAAKRLNMEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       152 ~~~~--~~~~~~~~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      ..+.  ...+++ -...+++..||+..|+.|+..+
T Consensus       165 ~~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  165 SALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             HHHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred             ccccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence            1111  111121 2346799999999999998776

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=93.28  E-value=0.89  Score=38.55  Aligned_cols=49  Identities=10%  Similarity=0.308  Sum_probs=37.7

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCC---chHHHHHHHHhhcCCccccceEEec
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNS---HRATIESKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~~~~~~f~~v~~~  141 (313)
                      +.|++.++|++|++.|.+++++||+   +...+...+ +.+|+....+.++++
T Consensus        18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~   69 (249)
T TIGR01457        18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTA   69 (249)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeH
Confidence            4568999999999999999999983   355555566 668887666666665

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=93.10  E-value=0.19  Score=43.24  Aligned_cols=101  Identities=12%  Similarity=0.067  Sum_probs=54.4

Q ss_pred             cEEEEecCCccccChHHHHH---HHHHHHHHcC-CCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360           10 SCVILDLDGTLLNTDGMFSE---VLKTFLVKYG-KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus        10 k~vifDlDGTL~d~~~~~~~---~~~~~~~~~g-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      =+++||+||+|+.....+..   +++.+...-| ..++.....+-.|.....-.+++...++...+.+++.+..      
T Consensus        36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSH------  109 (389)
T KOG1618|consen   36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSH------  109 (389)
T ss_pred             eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhc------
Confidence            35899999999987554433   3333333322 1233223333334455555667777778777666654322      


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW  131 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~  131 (313)
                          .+        ++.|.+..++.+++.+...  ++... +.+|+
T Consensus       110 ----sP--------~r~l~~~~~k~vLv~G~~~--vr~vA-egyGF  140 (389)
T KOG1618|consen  110 ----SP--------FRLLVEYHYKRVLVVGQGS--VREVA-EGYGF  140 (389)
T ss_pred             ----Ch--------HHHHhhhhhceEEEecCCc--HHHHh-hccCc
Confidence                11        2233344456666666443  34445 66776

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=92.94  E-value=0.29  Score=45.09  Aligned_cols=89  Identities=15%  Similarity=0.147  Sum_probs=67.1

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ...||++|.+.+|++.|++-+.+|+.++-...... ...|++++    +       ...+|+.-.++.++..-+-+=+.|
T Consensus       447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdf----i-------AeatPEdK~~~I~~eQ~~grlVAM  514 (681)
T COG2216         447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDF----I-------AEATPEDKLALIRQEQAEGRLVAM  514 (681)
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhh----h-------hcCChHHHHHHHHHHHhcCcEEEE
Confidence            35699999999999999999999988877665555 67788432    2       223345556666666666677889


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .||+.||-.+..++...+.+-
T Consensus       515 tGDGTNDAPALAqAdVg~AMN  535 (681)
T COG2216         515 TGDGTNDAPALAQADVGVAMN  535 (681)
T ss_pred             cCCCCCcchhhhhcchhhhhc
Confidence            999999999999998865443

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=92.82  E-value=0.81  Score=38.10  Aligned_cols=62  Identities=15%  Similarity=0.050  Sum_probs=48.9

Q ss_pred             cCCccccc--eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          129 HGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       129 ~~~~~~f~--~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      +++...|.  -|+++    ...++...|+++.+++|-+...-++|||+...-.+|+..+++++-+...
T Consensus       196 y~L~~~f~ieNIYSa----~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h  259 (274)
T TIGR01658       196 FRLDTIFRIENVYSS----IKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLH  259 (274)
T ss_pred             hccCCccccccccch----hhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence            56644443  34433    2345668999999999988889999999999999999999999988773

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain

Probab=92.81  E-value=0.11  Score=41.80  Aligned_cols=75  Identities=16%  Similarity=0.004  Sum_probs=51.9

Q ss_pred             eCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          114 SNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       114 s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ..++++|++. +.+.+++    ..+++|+|+.   .+.++.+.++.. ...+++                       +..
T Consensus        92 ~lsa~~Fi~~-L~~~l~~----~~ivvG~df~FG~~~~G~~~~L~~~-~~~g~~-----------------------v~~  142 (182)
T smart00764       92 TLDLRIFRKY-IAPALGI----THRYVGEEPFSPVTAIYNQTMKQTL-LSPAIE-----------------------VVE  142 (182)
T ss_pred             cCCHHHHHHH-HHHHcCc----eEEEEcCCCCCCCCCccCHHHHHHH-hhCCCE-----------------------EEE
Confidence            4567788864 5466777    8899999887   445666777776 355665                       666


Q ss_pred             eCCCCCccccccccceeeccccccCccc
Q 021360          191 VPSLPKQTHRYTAADEVINSLLDLRPEK  218 (313)
Q Consensus       191 v~~~~~~~~~~~~s~~ii~~l~e~~~~~  218 (313)
                      +.+... .....+|+.+++.+.+|+.+.
T Consensus       143 I~r~~~-~g~~iSST~IR~~L~~G~v~~  169 (182)
T smart00764      143 IERKKA-NGQPISASTVRKLLKEGNLEE  169 (182)
T ss_pred             EecccC-CCcEECHHHHHHHHHcCCHHH
Confidence            666333 344568899999999888766

Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.

>PLN02580 trehalose-phosphatase

Probab=92.47  E-value=0.28  Score=44.17  Aligned_cols=35  Identities=14%  Similarity=0.177  Sum_probs=29.5

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      ..+.|++.+.|+.|.+. .+++|+|+.+.+.++..+
T Consensus       140 A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l  174 (384)
T PLN02580        140 ALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELV  174 (384)
T ss_pred             ccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHh
Confidence            35667889999999988 689999999999888666

>PLN03017 trehalose-phosphatase

Probab=92.27  E-value=0.4  Score=42.81  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=25.5

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      +.+++.+.|++|. .+++++++|+.+...+....
T Consensus       134 i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~  166 (366)
T PLN03017        134 MSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV  166 (366)
T ss_pred             CCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence            4456778888888 66889999999888776553

>PLN02151 trehalose-phosphatase

Probab=91.79  E-value=0.36  Score=42.89  Aligned_cols=34  Identities=18%  Similarity=0.209  Sum_probs=27.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      .+.|++.+.|+.|.+ +.+++++|+.+...+...+
T Consensus       120 ~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~  153 (354)
T PLN02151        120 FMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFV  153 (354)
T ss_pred             cCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHc
Confidence            456788899999985 4799999999998887655

>PRK10444 UMP phosphatase; Provisional

Probab=91.73  E-value=1.4  Score=37.29  Aligned_cols=50  Identities=26%  Similarity=0.368  Sum_probs=36.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHH---HHHHhhcCCccccceEEec
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~~~~~~~f~~v~~~  141 (313)
                      .+.|++.+++++|++.|.+++++||++.....   ..+ +.+|+.-.-+.++++
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l-~~~G~~~~~~~i~ts   69 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF-ATAGVDVPDSVFYTS   69 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHhhEecH
Confidence            46789999999999999999999999765433   334 456764334555544

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=91.30  E-value=0.95  Score=33.51  Aligned_cols=83  Identities=16%  Similarity=0.116  Sum_probs=56.4

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHH-HHHHHhhcCCcccc---------ceEEecCCCCCCCCChHHHHHHH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATI-ESKISYQHGWNESF---------SVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~-~~~l~~~~~~~~~f---------~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      .+..|+++...|..|++.|+.++++|++....+ ...| +.+.+...+         +.+..++     ..+...|.++-
T Consensus        42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L-~~fkvk~~Gvlkps~e~ft~~~~g~-----gsklghfke~~  115 (144)
T KOG4549|consen   42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGL-ETFKVKQTGVLKPSLEEFTFEAVGD-----GSKLGHFKEFT  115 (144)
T ss_pred             eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHH-HHhccCcccccchhhhcCceeeecC-----cccchhHHHHh
Confidence            467899999999999999999999999976554 4444 555543322         2222222     12334567777


Q ss_pred             HHcCCCCCcEEEEecCHhh
Q 021360          159 KRLNMEPSSSLVIEDSVIG  177 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~D  177 (313)
                      ...+....+..++.|...+
T Consensus       116 n~s~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen  116 NNSNSIEKNKQVFDDESRN  134 (144)
T ss_pred             hccCcchhceeeecccccC
Confidence            7778888888888886643

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=90.30  E-value=3.2  Score=34.85  Aligned_cols=87  Identities=21%  Similarity=0.237  Sum_probs=55.5

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCc---hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      -.++|++.+.++.+++.|+++.++||+.   .......+.+.+|+.-..+.++.+.         ......+++.. +.+
T Consensus        13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~---------~~~~~~l~~~~-~~~   82 (236)
T TIGR01460        13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG---------SVTKDLLRQRF-EGE   82 (236)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH---------HHHHHHHHHhC-CCC
Confidence            3568899999999999999999999775   2333344534467755555555543         22333333322 335


Q ss_pred             cEEEEecCHhhHHHHHHcCCe
Q 021360          167 SSLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~  187 (313)
                      .++++|.. ...+.++..|+.
T Consensus        83 ~v~v~G~~-~~~~~l~~~g~~  102 (236)
T TIGR01460        83 KVYVIGVG-ELRESLEGLGFR  102 (236)
T ss_pred             EEEEECCH-HHHHHHHHcCCc
Confidence            68888863 445566777764

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=90.08  E-value=0.81  Score=39.06  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=28.6

Q ss_pred             CCCCchHHHHHHHHHHCC-CCEEEEeCCchHHHHHHH
Q 021360           90 VKALPGANRLIKHLSCHG-VPMALASNSHRATIESKI  125 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g-~~~~i~s~~~~~~~~~~l  125 (313)
                      ..+.+++.++|+.|.+.. -.++++|+.+..+++..+
T Consensus        39 a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~   75 (266)
T COG1877          39 AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF   75 (266)
T ss_pred             cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence            356778889999998872 248999999999888666

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=88.62  E-value=0.68  Score=39.48  Aligned_cols=49  Identities=18%  Similarity=0.389  Sum_probs=36.6

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCccccceEEec
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~~~f~~v~~~  141 (313)
                      +.|++.+.+++|++.|++++++||++...   +...+ +.+|+....+.++++
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts   73 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP   73 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence            67899999999999999999999876543   44455 567775444555554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=88.61  E-value=4.2  Score=41.88  Aligned_cols=51  Identities=20%  Similarity=0.291  Sum_probs=36.9

Q ss_pred             CHHHHHHHHHHHHHhhh-------ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHH
Q 021360           71 AKHEFVNEVYSMFSDHL-------CKVKALPGANRLIKHLSCHGVPMALASNSHRATI  121 (313)
Q Consensus        71 ~~~~~~~~~~~~~~~~~-------~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~  121 (313)
                      +.++..++..+..+...       -+-++.+|+.+.++.|++.|++++++|+-..+.+
T Consensus       624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETA  681 (1151)
T KOG0206|consen  624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETA  681 (1151)
T ss_pred             CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHH
Confidence            45555555555555443       1457889999999999999999999987655443

>PTZ00174 phosphomannomutase; Provisional

Probab=87.93  E-value=0.63  Score=39.41  Aligned_cols=43  Identities=7%  Similarity=-0.169  Sum_probs=34.7

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEeC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD----~~~Di~~a~~~G~~~i~v~  192 (313)
                      .+-.+...++.+++.    ++++++|||    +.||++|.+.++...+.|.
T Consensus       185 ~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~  231 (247)
T PTZ00174        185 KGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK  231 (247)
T ss_pred             CCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence            455566888888877    699999999    8999999998777656665

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=87.06  E-value=0.087  Score=44.61  Aligned_cols=94  Identities=12%  Similarity=0.126  Sum_probs=57.1

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCC-ccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~-~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      +.-+|++.++|....+. +.++++|.+.+.+...++ ..+.- ...+...+..+.+....+   .+.+-+...|-+..++
T Consensus       130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~-D~LD~~~~i~~~RlyR~~C~~~~g---~yvKdls~~~~dL~~v  204 (262)
T KOG1605|consen  130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLL-DILDPDRKIISHRLYRDSCTLKDG---NYVKDLSVLGRDLSKV  204 (262)
T ss_pred             EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHH-HHccCCCCeeeeeecccceEeECC---cEEEEcceeccCcccE
Confidence            45678899999888877 788888888888877666 44432 111222222221111100   0111113556688999


Q ss_pred             EEEecCHhhHHHHHHcCCeE
Q 021360          169 LVIEDSVIGVVAGKAAGMEV  188 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~  188 (313)
                      +.|+|++.-..+--.-|+++
T Consensus       205 iIiDNsP~sy~~~p~NgIpI  224 (262)
T KOG1605|consen  205 IIVDNSPQSYRLQPENGIPI  224 (262)
T ss_pred             EEEcCChHHhccCccCCCcc
Confidence            99999998777766666653

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=86.78  E-value=1.3  Score=42.01  Aligned_cols=88  Identities=16%  Similarity=0.253  Sum_probs=47.4

Q ss_pred             hHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcC-----CccccceEEecCC--------CCCCCCChHHHHHHH
Q 021360           95 GANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHG-----WNESFSVIVGSDE--------VRTGKPSPDIFLEAA  158 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~-----~~~~f~~v~~~~~--------~~~~kp~~~~~~~~~  158 (313)
                      |+..+...+++.||++..+|......   .+..| ....     +.+- -.+++.+.        +-.+||  +-|+-+|
T Consensus       562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL-~nv~QdG~~LPdG-PViLSPd~lf~Al~REVI~RkP--e~FKIAc  637 (738)
T KOG2116|consen  562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYL-KNVEQDGKKLPDG-PVILSPDSLFAALHREVIERKP--EVFKIAC  637 (738)
T ss_pred             hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHH-HHHhhcCccCCCC-CEEeCCCcchHHHHHHHHHcCc--hhhhHHH
Confidence            67778888899999998888764322   23333 2111     1110 12333221        114444  3333333


Q ss_pred             -----HHcCCCCCc--EEEEecCHhhHHHHHHcCCe
Q 021360          159 -----KRLNMEPSS--SLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       159 -----~~~~~~~~~--~i~vgD~~~Di~~a~~~G~~  187 (313)
                           ..+. +-.+  ...||+..+|.-.=++.|++
T Consensus       638 L~DIk~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP  672 (738)
T KOG2116|consen  638 LTDIKNLFP-PSGNPFYAGFGNRITDVISYRQVGVP  672 (738)
T ss_pred             HHHHHHhcC-CCCCceeeecCCCcccceeeeeecCC
Confidence                 2332 2233  33489999998888888875

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=83.80  E-value=5.7  Score=35.08  Aligned_cols=88  Identities=17%  Similarity=0.221  Sum_probs=56.6

Q ss_pred             CCCCchHHHHHHHHHHC----CCCEEEEeCCc---hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           90 VKALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~----g~~~~i~s~~~---~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      -.+.|++.++++.|+..    |+++.++||..   .......+.+.+|+.-..+.++.+.         .....+++++ 
T Consensus        15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~-   84 (321)
T TIGR01456        15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKY-   84 (321)
T ss_pred             ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHc-
Confidence            35688999999999998    99999999886   3333333336677743333444331         1334444443 


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                       . ..++++|.+. -...++.+|+..+.
T Consensus        85 -~-~~v~viG~~~-~~~~l~~~G~~~vv  109 (321)
T TIGR01456        85 -E-KRILAVGTGS-VRGVAEGYGFQNVV  109 (321)
T ss_pred             -C-CceEEEeChH-HHHHHHHcCCcccc
Confidence             2 2688888764 46667789987543

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2

Probab=82.82  E-value=0.5  Score=36.99  Aligned_cols=66  Identities=18%  Similarity=0.215  Sum_probs=45.6

Q ss_pred             hHHHHHHHHHHCCCCEEEE--------eCCchHHHHHHHHhhcCCccccceEEecCCCC---CCCCChHHHHHHHHHcCC
Q 021360           95 GANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~--------s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~---~~kp~~~~~~~~~~~~~~  163 (313)
                      ...+-++.|.+.|+...++        ..++++|++.+|.+.+++    ..+++|+|+.   .++++.+.+++.++++|+
T Consensus        63 s~~ek~~~l~~~Gvd~~~~~~F~~~~~~ls~~~Fi~~iL~~~l~~----~~ivvG~DfrFG~~~~G~~~~L~~~~~~~g~  138 (157)
T PF06574_consen   63 SLEEKLELLESLGVDYVIVIPFTEEFANLSPEDFIEKILKEKLNV----KHIVVGEDFRFGKNRSGDVELLKELGKEYGF  138 (157)
T ss_dssp             -HHHHHHHHHHTTESEEEEE-CCCHHCCS-HHHHHHHHCCCHCTE----EEEEEETT-EESGGGEEEHHHHHHCTTTT-S
T ss_pred             CHHHHHHHHHHcCCCEEEEecchHHHHcCCHHHHHHHHHHhcCCc----cEEEEccCccCCCCCCCCHHHHHHhcccCce
Confidence            3456677788888776554        345678888777457888    8899999886   445677888888777777


Q ss_pred             C
Q 021360          164 E  164 (313)
Q Consensus       164 ~  164 (313)
                      .
T Consensus       139 ~  139 (157)
T PF06574_consen  139 E  139 (157)
T ss_dssp             E
T ss_pred             E
Confidence            6

7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=82.79  E-value=3.5  Score=37.05  Aligned_cols=100  Identities=18%  Similarity=0.221  Sum_probs=70.1

Q ss_pred             chHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc--CCccccceEEecCC-------------C--------------
Q 021360           94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDE-------------V--------------  144 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--~~~~~f~~v~~~~~-------------~--------------  144 (313)
                      +....++..+++.|.+..+.||+...+....+...+  +...+|+.+++...             +              
T Consensus       201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~  280 (424)
T KOG2469|consen  201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTG  280 (424)
T ss_pred             CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCC
Confidence            334448899999999999999998887766553334  46677887766520             0              


Q ss_pred             ---CCCCCChHHHHHHHHHcCCCCCcEEEEecCHh-hHH-HHHHcCCeEEEeCC
Q 021360          145 ---RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVV-AGKAAGMEVVAVPS  193 (313)
Q Consensus       145 ---~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~-Di~-~a~~~G~~~i~v~~  193 (313)
                         ..+.+++.....++..++....+++++||+.. |+. .-+.-|++++.|.+
T Consensus       281 p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p  334 (424)
T KOG2469|consen  281 PLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP  334 (424)
T ss_pred             cchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence               02334445667777777888899999999995 644 35666888777766

>TIGR00685 T6PP trehalose-phosphatase

Probab=81.85  E-value=0.84  Score=38.54  Aligned_cols=15  Identities=33%  Similarity=0.505  Sum_probs=12.6

Q ss_pred             ccEEEEecCCccccC
Q 021360            9 MSCVILDLDGTLLNT   23 (313)
Q Consensus         9 ~k~vifDlDGTL~d~   23 (313)
                      ..+++||+||||++.
T Consensus         3 ~~~l~lD~DGTL~~~   17 (244)
T TIGR00685         3 KRAFFFDYDGTLSEI   17 (244)
T ss_pred             cEEEEEecCccccCC
Confidence            367899999999964

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=81.83  E-value=15  Score=31.10  Aligned_cols=72  Identities=15%  Similarity=0.100  Sum_probs=43.4

Q ss_pred             CCCEEEEeCCchHHHHHHH--HhhcCCccccc-eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHH
Q 021360          107 GVPMALASNSHRATIESKI--SYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA  183 (313)
Q Consensus       107 g~~~~i~s~~~~~~~~~~l--~~~~~~~~~f~-~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~  183 (313)
                      -++++++|..+...-++.+  .+..|+.-  | ..+.     .+-++..+    ++.++-.    |+|+|....++.|. 
T Consensus       186 piRtalVTAR~apah~RvI~TLr~Wgv~v--DEafFL-----gG~~K~~v----L~~~~ph----IFFDDQ~~H~~~a~-  249 (264)
T PF06189_consen  186 PIRTALVTARSAPAHERVIRTLRSWGVRV--DEAFFL-----GGLPKGPV----LKAFRPH----IFFDDQDGHLESAS-  249 (264)
T ss_pred             ceEEEEEEcCCCchhHHHHHHHHHcCCcH--hHHHHh-----CCCchhHH----HHhhCCC----EeecCchhhhhHhh-
Confidence            3778899976544334444  14455521  2 2222     23333333    3444444    89999999999998 


Q ss_pred             cCCeEEEeCCC
Q 021360          184 AGMEVVAVPSL  194 (313)
Q Consensus       184 ~G~~~i~v~~~  194 (313)
                      .++++..|+.+
T Consensus       250 ~~vps~hVP~g  260 (264)
T PF06189_consen  250 KVVPSGHVPYG  260 (264)
T ss_pred             cCCCEEeccCC
Confidence            88888888764

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=80.50  E-value=3.1  Score=41.60  Aligned_cols=35  Identities=14%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             CCCchHHHHHHHHHHC-CCCEEEEeCCchHHHHHHH
Q 021360           91 KALPGANRLIKHLSCH-GVPMALASNSHRATIESKI  125 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l  125 (313)
                      .+.|++.++|+.|.+. +-.++|+|+.+.+.++..+
T Consensus       532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~  567 (797)
T PLN03063        532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF  567 (797)
T ss_pred             CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHh
Confidence            4567888999999764 5679999999999988777

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	313
3l5k_A	250	The Crystal Structure Of Human Haloacid Dehalogenas		3e-31
1nb0_A	147	Crystal Structure Of Human Riboflavin Kinase Length		1e-16
1q9s_A	149	Crystal Structure Of Riboflavin Kinase With Ternary		2e-16
1n05_A	163	Crystal Structure Of Schizosaccharomyces Pombe Ribo		2e-15
3e58_A	214	Crystal Structure Of Putative Beta-Phosphoglucomuta		4e-11
3nas_A	233	The Crystal Structure Of Beta-Phosphoglucomutase Fr		1e-10
3kbb_A	216	Crystal Structure Of Putative Beta-Phosphoglucomuta		4e-10
4ex6_A	237	Crystal Structure Of The Alnumycin P Phosphatase Al		4e-09
1te2_A	226	Putative Phosphatase Ynic From Escherichia Coli K12		9e-09
4eek_A	259	Crystal Structure Of Had Family Hydrolase Dr_1622 F		5e-08
2x0k_A	338	Crystal Structure Of Modular Fad Synthetase From Co		6e-08
4gib_A	250	2.27 Angstrom Crystal Structure Of Beta-Phosphogluc		6e-08
3zug_A	338	E268d Mutant Of Fad Synthetase From Corynebacterium		6e-08
3dv9_A	247	Putative Beta-Phosphoglucomutase From Bacteroides V		8e-08
1o03_A	221	Structure Of Pentavalent Phosphorous Intermediate O		3e-07
3fm9_A	221	Analysis Of The Structural Determinants Underlying		3e-07
3qub_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		3e-07
1lvh_A	221	The Structure Of Phosphorylated Beta-phosphoglucomu		3e-07
3qyp_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		6e-07
3qu5_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		6e-07
3qu4_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		6e-07
3qut_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		6e-07
3quq_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		7e-07
3r9k_A	243	Crystal Structure Of Pyrophosphatase From Bacteroid		7e-07
3d6j_A	225	Crystal Structure Of Putative Haloacid Dehalogenase		8e-07
4g9b_A	243	Crystal Structure Of Beta-Phosphoglucomutase Homolo		1e-06
2fdr_A	229	Crystal Structure Of Conserved Haloacid Dehalogenas		8e-06
3bnw_A	181	Crystal Structure Of Riboflavin Kinase From Trypano		2e-05
3kzx_A	231	Crystal Structure Of A Had-Superfamily Hydrolase Fr		3e-05
2yy6_A	213	Crystal Structure Of The Phosphoglycolate Phosphata		8e-05
2nyv_A	222	X-Ray Crystal Structure Of A Phosphoglycolate Phosp		2e-04
3s6j_A	233	The Crystal Structure Of A Hydrolase From Pseudomon		3e-04
2hdo_A	209	Crystal Structure Of Putative Phosphoglycolate Phos		4e-04

>pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Query: 26  MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
           ++S V +    +Y K++    K  ++GK  LE A II++   LP +K E V E  +   +
Sbjct: 47  LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 106
Query: 86  HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
                  +PGA +LI HL  HG+P ALA++S  A+ + K S    +   FS +++G D E
Sbjct: 107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPE 166
Query: 144 VRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
           V+ GKP PDIFL  AKR +  P+    LV ED+  GV A  AAGM+VV VP         
Sbjct: 167 VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLT 226
Query: 202 TAADEVINSLLDLRPEKWGLPPFQ 225
           T A  V+NSL D +PE +GLP ++
Sbjct: 227 TKATLVLNSLQDFQPELFGLPSYE 250

>pdb|1NB0|A Chain A, Crystal Structure Of Human Riboflavin Kinase Length = 147

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 54/74 (72%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 296 IGWNPYFDNAEKTI 309
           IGWNPY+ N +K++
Sbjct: 64  IGWNPYYKNTKKSM 77

>pdb|1Q9S|A Chain A, Crystal Structure Of Riboflavin Kinase With Ternary Product Complex Length = 149

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 54/74 (72%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 6   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 65
Query: 296 IGWNPYFDNAEKTI 309
           IGWNPY+ N +K++
Sbjct: 66  IGWNPYYKNTKKSM 79

>pdb|1N05|A Chain A, Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Kinase Reveals A Novel Atp And Riboflavin Binding Fold Length = 163

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P    G VV G GRGSK LGIPTAN+S +   ++L    SGVYFG+A +  R V+ MVMS
Sbjct: 23  PIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQKR-VFPMVMS 81
Query: 296 IGWNPYFDNAEKT 308
           +GWNPY+ N  ++
Sbjct: 82  VGWNPYYKNKLRS 94

>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 2/122 (1%)
Query: 93  LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152
            P   +++  +   G+ + LAS+S +A I   +  ++     F +++  +E +  KP+P+
Sbjct: 91  FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE-ENRLQGFFDIVLSGEEFKESKPNPE 149
Query: 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212
           I+L A K+LN++ S +L+IEDS  G+ AG AA +EV A+        + +AA  +++SL 
Sbjct: 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGXDQ-SAAKGLLDSLT 208
Query: 213 DL 214
           D+
Sbjct: 209 DV 210

>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 77  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 136
           N  Y      L     LPG  RL+  L    + + LAS+S  A    KI  +    + F 
Sbjct: 78  NRDYQXLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNA---PKILRRLAIIDDFH 134
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
            IV    +  GKP PDIFL AA  L++ P+    IED+  G+ A K+AG   V V     
Sbjct: 135 AIVDPTTLAKGKPDPDIFLTAAAXLDVSPADCAAIEDAEAGISAIKSAGXFAVGV----G 190
Query: 197 QTHRYTAADEVINSLLDLRPE 217
           Q      AD V+    DL  E
Sbjct: 191 QGQPXLGADLVVRQTSDLTLE 211

>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 26  MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS---- 81
           ++ E  +     YGK +      +I G    E   I+ E   +  +   F   V+     
Sbjct: 18  LYFEAYRRVAESYGKPYTEDLHRRIXGVPEREGLPILXEALEIKDSLENFKKRVHEEKKR 77
Query: 82  MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWNESFSVIVG 140
           +FS+ L   K  PG    ++ +    + +ALA+++  R  +E     +    + F V V 
Sbjct: 78  VFSELL---KENPGVREALEFVKSKRIKLALATSTPQREALER--LRRLDLEKYFDVXVF 132
Query: 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
            D+V+ GKP P+I+L   +RLN+ P   +V EDS  GV A K+AG+E +
Sbjct: 133 GDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERI 181

>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 94  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
           PG    +  LS  G  +A+A++       + I+   G +   +VI G D V  GKP PD+
Sbjct: 107 PGVLEGLDRLSAAGFRLAMATSKVEKAARA-IAELTGLDTRLTVIAGDDSVERGKPHPDM 165
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINS 210
            L  A+ L + P   +VI D V     G+AAGM V+ V    S P +  R   AD V++S
Sbjct: 166 ALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMR-AGADTVVDS 224
Query: 211 L 211
Sbjct: 225 F 225

>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Query: 93  LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152
           LPG    +      G+ + LAS S    +E K+       +SF  +  ++++   KP P 
Sbjct: 96  LPGVREAVALCKEQGLLVGLASASPLHXLE-KVLTXFDLRDSFDALASAEKLPYSKPHPQ 154
Query: 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSL 211
           ++L+ A +L ++P + + +EDSV G +A KAA    + VP+   Q   R+  A+  ++SL
Sbjct: 155 VYLDCAAKLGVDPLTCVALEDSVNGXIASKAARXRSIVVPAPEAQNDPRFVLANVKLSSL 214
Query: 212 LDL 214
            +L
Sbjct: 215 TEL 217

>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 74  EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY------ 127
           +F++ + + F+  +  V A+ GA   ++ L   GVP A+ SNS R  +  K+        
Sbjct: 93  DFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL 152
Query: 128 --QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
             +H ++ S+   VG      GKP PD++  AA++L + P   +VIEDSV
Sbjct: 153 AGEHIYDPSW---VGG----RGKPHPDLYTFAAQQLGILPERCVVIEDSV 195

>pdb|2X0K|A Chain A, Crystal Structure Of Modular Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 237 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 285
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 286 TRGVYKMVMSIGWNPYFDNAEKTIVSL 312
               Y   +S+G NP F + ++++ S 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVESF 270

>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 77  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 136
           N  Y    D +     LPG   L+  +  + + + L+S S  A     +    G ++ F 
Sbjct: 102 NNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKNAI---NVLNHLGISDKFD 158
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
            I  + + +  KP P+IFL +AK LN+ P + + IED+  G+ A  +A M  V V
Sbjct: 159 FIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV 213

>pdb|3ZUG|A Chain A, E268d Mutant Of Fad Synthetase From Corynebacterium Ammoniagenes Length = 338

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 237 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGW-----------AGLS 285
           +Y+ GPVV+G GRG K LG PTAN   + + D ++    GVY GW             + 
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTAN---QYFHDTVALPADGVYAGWLTILPTEAPVSGNME 243
Query: 286 TRGVYKMVMSIGWNPYFDNAEKTIVSL 312
               Y   +S+G NP F + ++++ S 
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVDSF 270

>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 71  AKHEFVNEVYSMFSDHL--C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
           A  E +  +Y   ++    C K +  PGA  ++  +   G+   + + S + ++  ++++
Sbjct: 85  ATEEEIKAIYQAKTEEFNKCPKAERXPGALEVLTKIKSEGLTPXVVTGSGQTSLLDRLNH 144
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
                   ++ V + +V+ GKP+P+ +L A K+   +P+ +LVIE++ +GV AG AAG+ 
Sbjct: 145 NFPGIFQANLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIENAPLGVQAGVAAGIF 204
Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPE 217
            +AV + P   H     +E  N L    P+
Sbjct: 205 TIAVNTGP--LHDNVLLNEGANLLFHSXPD 232

>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 77  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 136
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 77  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 136
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHAGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 77  NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS 136
           N+ Y      +      PG  +L+K L  + + +ALAS S       +     G+   F 
Sbjct: 77  NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLERMNLTGY---FD 133
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
            I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +G
Sbjct: 134 AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSG 182

>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHNGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 28  SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY---SMFS 84
           SE     +  +G +    E +   G+T      I+ +      A  E +  +Y   S+  
Sbjct: 43  SEAWHQVMKTHGLDLSREEAYMHDGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102
Query: 85  DHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESF--SVIVGS 141
           +   + + +PGA  L++ +   G+ PM +  +   + +E     +H +   F   ++V +
Sbjct: 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER---LEHNFPGMFHKELMVTA 159
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
            +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV AG  AG+  +AV + P
Sbjct: 160 FDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213

>pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 49  KIVGKTPLEEAAIIVEDYGLPCAKH-EFVNEVYSMFSDHLCKVKAL--PGANRLIKHLSC 105
           + +GKT LEE+  I+   G+  A   E   + YS  +D       +  P     + HL  
Sbjct: 47  RTIGKT-LEESFSILT--GITDADQLESFRQEYSKEADIYXNANTILFPDTLPTLTHLKK 103
Query: 106 HGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165
            G+ + + S  +R  I S +   H  ++ F +I+G ++V   KP P+  L A  RL   P
Sbjct: 104 QGIRIGIISTKYRFRILSFLR-NHXPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACP 162
Query: 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--ADEVINS---LLDLRPEKWG 220
              L I DS +      AAG+    V S       + A   D +I++   L+ +  +K G
Sbjct: 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGXTTAQEFQAYPYDRIISTLGQLISVPEDKSG 222
Query: 221 LP 222
            P
Sbjct: 223 CP 224

>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 93  LPGANRLIKHLSCHGVPMALASNSHRA-TIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
           LPG   L+  L    + + LAS S  A TI + +  +    E F+    + +++  KP P
Sbjct: 97  LPGIRSLLADLRAQQISVGLASVSLNAPTILAALELR----EFFTFCADASQLKNSKPDP 152
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
           +IFL A   L + P + + IED+  G+ A  A+GM  V +
Sbjct: 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGI 192

>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV----AVPSL 194
           +G+D V   KP PDIFL  A +  + P   +V+EDSV G+   +AAG  V+    A  + 
Sbjct: 137 LGADRV---KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGXRVIGFTGASHTY 193
Query: 195 PKQTHRYT--AADEVINSLLDL 214
           P    R T   A+ VI+   DL
Sbjct: 194 PSHADRLTDAGAETVISRXQDL 215

>pdb|3BNW|A Chain A, Crystal Structure Of Riboflavin Kinase From Trypanosoma Brucei Length = 181

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 235 EPWYIGGPVVKGLGRGSKVLGIPTANLSTE-GYSDVLSEHPSGVYFGWAGLS-------- 285
           +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW  +S        
Sbjct: 16  QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWGTVSQVPGKERE 75
Query: 286 TRGVYKMVMSIGWNPYFDNAEKTI 309
           + G Y    SIG+N  FD    T+
Sbjct: 76  SFGPYPFAASIGFNMQFDEKTLTV 99

>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 95  GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154
           GA  L+  L  + + MA+ SN +   + S+I +++     F  I+GS +  T KPSP+  
Sbjct: 107 GAIELLDTLKENNITMAIVSNKNGERLRSEIHHKN-LTHYFDSIIGSGDTGTIKPSPEPV 165
Query: 155 LEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAG 185
           L A   +N+EPS     I DS+  + +   AG
Sbjct: 166 LAALTNINIEPSKEVFFIGDSISDIQSAIEAG 197

>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 72  KHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
           K +F  E   +F  H  +      K  P     ++ L   G  +A+ SN     +  KI 
Sbjct: 57  KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE-LSKKIL 115
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
                +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AGK AG
Sbjct: 116 DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAG 174

>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 72  KHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
           K +F  E   +F  H  +      K  P     ++ L   G  +A+ SN     +  KI 
Sbjct: 59  KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNK-LEELSKKIL 117
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
                +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AGK AG
Sbjct: 118 DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAG 176

>pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 89  KVKALPGANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRT 146
           ++ ALPGA  L++ L    +   +A++     ATI  K + +   N+    IV  D+V  
Sbjct: 89  QIIALPGAVELLETLDKENLKWCIATSGGIDTATINLK-ALKLDINKIN--IVTRDDVSY 145
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
           GKP PD+FL AAK++       LVI D++   +A +
Sbjct: 146 GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDXLAAR 181

>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 27  FSEVLKTFLVKYGKEWDGREKHKI---VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83
           ++ V +  L  YGK +   +  K      +    E  I   ++    A++E V       
Sbjct: 22  YTTVXREVLATYGKPFSPAQAQKTFPXAAEQAXTELGIAASEFDHFQAQYEDVX------ 75
Query: 84  SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143
           + H  +++  PG   L + L    + + + ++  R  +ES     + +    +V + +D+
Sbjct: 76  ASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGXR-SYPFXXRXAVTISADD 133
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
               KP P   L A +++N+ P ++L I DSV      +AA ++
Sbjct: 134 TPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	313
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	8e-88
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	1e-67
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	3e-65
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	4e-63
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	2e-61
1te2_A	226	Putative phosphatase; structural genomics, phospha	3e-60
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	2e-59
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	1e-55
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	9e-55
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	7e-53
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	1e-52
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	7e-52
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	2e-51
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	5e-36
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	2e-31
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	2e-31
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	3e-31
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	6e-31
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	1e-30
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	1e-30
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	4e-30
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	9e-30
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	5e-28
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	4e-27
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	8e-27
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	2e-26
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	3e-26
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	3e-26
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	4e-25
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	8e-25
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	1e-24
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	3e-24
2zg6_A	220	Putative uncharacterized protein ST2620, probable	6e-24
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	7e-24
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	9e-24
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	2e-23
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	3e-23
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	4e-23
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	7e-23
2hsz_A	243	Novel predicted phosphatase; structural genomics,	9e-23
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	4e-22
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	4e-20
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	7e-20
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	1e-18
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	2e-18
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	7e-17
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	9e-17
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	1e-15
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-15
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	5e-15
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	1e-14
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	5e-14
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	8e-14
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	9e-14
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	1e-12
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	2e-12
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	2e-11
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	8e-11
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	1e-10
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	5e-09
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	9e-09
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	3e-07
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	3e-07
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	4e-07
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	1e-05
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	2e-05
2o2x_A	218	Hypothetical protein; structural genomics, joint c	3e-05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	6e-04
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	7e-04

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score =  262 bits (671), Expect = 8e-88
 Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 5/229 (2%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           MA P + + + +I D+DG LL+T+ ++S V +    +Y K++    K  ++GK  LE A 
Sbjct: 23  MAAPPQPV-THLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQ 81

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
           II++   LP +K E V E  +   +       +PGA +LI HL  HG+P ALA++S  A+
Sbjct: 82  IIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSAS 141

Query: 121 IESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVI 176
            + K S    +   FS IV  D  EV+ GKP PDIFL  AKR +  P+    LV ED+  
Sbjct: 142 FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPN 201

Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
           GV A  AAGM+VV VP         T A  V+NSL D +PE +GLP ++
Sbjct: 202 GVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score =  209 bits (534), Expect = 1e-67
 Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
             ++  +I D+DG L +T+  + +   +FL + G   D       +G    +    I+ D
Sbjct: 2   NAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRD 61

Query: 66  YGLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
                       E  +   ++    K    P   +++  +   G+ + LAS+S +A I  
Sbjct: 62  EYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFR 121

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
            +  ++     F +++  +E +  KP+P+I+L A K+LN++ S +L+IEDS  G+ AG A
Sbjct: 122 ALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA 180

Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           A +EV A+    +     +AA  +++SL D+
Sbjct: 181 ADVEVWAIRD-NEFGMDQSAAKGLLDSLTDV 210

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score =  204 bits (522), Expect = 3e-65
 Identities = 49/229 (21%), Positives = 107/229 (46%), Gaps = 12/229 (5%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           V+ D+DG L ++    +E     + ++G      E +   G+T      I+        A
Sbjct: 26  VLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDA 85

Query: 72  KHEFVNEVYSMFSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
             E +  +Y   ++   K    + +PGA  ++  +   G+   + + S + ++  ++++ 
Sbjct: 86  TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHN 145

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
                  +++V + +V+ GKP+P+ +L A K+   +P+ +LVIE++ +GV AG AAG+  
Sbjct: 146 FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFT 205

Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE 235
           +AV +  L         A+ + +S+ D   + W      + ++  L  +
Sbjct: 206 IAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNW------ETLQSALKQD 247

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score =  194 bits (496), Expect = 2e-61
 Identities = 50/218 (22%), Positives = 101/218 (46%), Gaps = 5/218 (2%)

Query: 2   AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
              ++K +  V+ D+DG L N+    SE     +  +G +    E +   G+T      I
Sbjct: 17  GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76

Query: 62  IVEDYGLPCAKHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
           + +      A  E +  +Y   S       + + +PGA  L++ +   G+   + + S +
Sbjct: 77  VFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQ 136

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
            ++  ++ +         ++V + +V+ GKP+P+ +L A K+  ++   ++VIE++ +GV
Sbjct: 137 LSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGV 196

Query: 179 VAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
            AG  AG+  +AV +  L  Q      AD +  S+  L
Sbjct: 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score =  191 bits (487), Expect = 3e-60
 Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 5/211 (2%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP- 69
            I D+DG L++++ ++       +   G +   R +    +G        +         
Sbjct: 12  AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 71

Query: 70  CAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
            ++ E V  V +     + +    LPG    +      G+ + LAS S    +E  ++  
Sbjct: 72  PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT-M 130

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
               +SF  +  ++++   KP P ++L+ A +L ++P + + +EDSV G++A KAA M  
Sbjct: 131 FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 190

Query: 189 VAVPSLPKQTH-RYTAADEVINSLLDLRPEK 218
           + VP+   Q   R+  A+  ++SL +L  + 
Sbjct: 191 IVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score =  190 bits (484), Expect = 2e-59
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 13/225 (5%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYG 67
              V+ DLDG L+ ++G+ ++V ++ L + G   D  E      G+      A + + + 
Sbjct: 28  FDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHD 87

Query: 68  LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
                 +F++ + + F+  +  V A+ GA   ++ L   GVP A+ SNS R  +  K+  
Sbjct: 88  FVPP-PDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR- 145

Query: 128 QHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
             G  E     +   S     GKP PD++  AA++L + P   +VIEDSV G  AG AAG
Sbjct: 146 VAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAG 205

Query: 186 MEVVAV--PSLPKQTH----RYTAADEVINSLLDLRP--EKWGLP 222
             +  +  P  P            A  V+ S  +LR    + GL 
Sbjct: 206 ATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLL 250

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score =  179 bits (456), Expect = 1e-55
 Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 14/214 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPC 70
           V+ DLDG + +T        K    + G     R+   ++ G +  +    I++      
Sbjct: 5   VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV 64

Query: 71  AKHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
           +  EF       N+ Y      +      PG  +L+K L  + + +ALAS S       +
Sbjct: 65  SAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLE 124

Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
              +      F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K +
Sbjct: 125 ---RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181

Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
           G   + V               ++        E 
Sbjct: 182 GALPIGVGR----PEDLGDDIVIVPDTSHYTLEF 211

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score =  177 bits (450), Expect = 9e-55
 Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 15/215 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           VI DLDG + +T        K    +    +D     ++ G +  E    I+   G    
Sbjct: 5   VIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETK 64

Query: 72  -----KHEFV---NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
                K E +   N  Y M    L     LPG  RL+  L    + + LAS+S  A    
Sbjct: 65  YTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP--- 121

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
           KI  +    + F  IV    +  GKP PDIFL AA  L++ P+    IED+  G+ A K+
Sbjct: 122 KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS 181

Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
           AGM  V V            AD V+    DL  E 
Sbjct: 182 AGMFAVGVGQ----GQPMLGADLVVRQTSDLTLEL 212

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score =  172 bits (437), Expect = 7e-53
 Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 20/226 (8%)

Query: 9   MS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVE 64
           MS    +I D DG L++++ + ++V    L + G      E  +   G T       +  
Sbjct: 1   MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES 60

Query: 65  DYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
           +  +P      +++   +    L + VK + G    +  L     P  + SNS    ++ 
Sbjct: 61  EASIP-LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDM 116

Query: 124 KISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
            ++ + G    F+  + S +       KP PDIFL  A +  + P   +V+EDSV G+  
Sbjct: 117 MLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHG 175

Query: 181 GKAAGMEVVAVPSLP------KQTHRYTAADEVINSLLDLRPEKWG 220
            +AAGM V+                    A+ VI+ + DL P    
Sbjct: 176 ARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIA 220

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  172 bits (437), Expect = 1e-52
 Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 12/213 (5%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
            I DLDGTL ++        K  L            H+ +G +       +  + G+   
Sbjct: 9   FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSIT 68

Query: 72  KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
             +         + Y         + ALPGA  L++ L    +   +A++    T    +
Sbjct: 69  DEQAERLSEKHAQAYERLQHQ---IIALPGAVELLETLDKENLKWCIATSGGIDTATINL 125

Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
                 + +   IV  D+V  GKP PD+FL AAK++       LVI D++  ++A +   
Sbjct: 126 K-ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184

Query: 186 MEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
              V + S            A  V    LDL  
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDLLN 217

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score =  170 bits (432), Expect = 7e-52
 Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 21/226 (9%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           M   L+     VI DLDG + +T  +  +  +    + G   D +    + G +  E   
Sbjct: 1   MVMKLQ----GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLR 56

Query: 61  IIVEDYGLP--------CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
            I++  G                 N +Y      L     LPG   L+  L    + + L
Sbjct: 57  RILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116

Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
           AS S  A             E F+    + +++  KP P+IFL A   L + P + + IE
Sbjct: 117 ASVSLNAPTILA---ALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIE 173

Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
           D+  G+ A  A+GM  V + +        T A  ++ S   L   +
Sbjct: 174 DAQAGIDAINASGMRSVGIGA------GLTGAQLLLPSTESLTWPR 213

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score =  169 bits (431), Expect = 2e-51
 Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 14/227 (6%)

Query: 2   AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
            +PL   ++  + D+DGT++ +    +   + F             H   G    +  A 
Sbjct: 28  TKPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAK 87

Query: 62  IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALASNSHRAT 120
              D+      ++   E+   + +H      +PGA +L   L+       A+A++  R  
Sbjct: 88  FAPDFADEEYVNKLEGEIPEKYGEH---SIEVPGAVKLCNALNALPKEKWAVATSGTRDM 144

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-------MEPSSSLVIED 173
            +          +     + +++V+ GKP P+ +L+    L           S  +V ED
Sbjct: 145 AKKWF--DILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 202

Query: 174 SVIGVVAGKAAGMEVVAVPS-LPKQTHRYTAADEVINSLLDLRPEKW 219
           +  G+ AGKAAG ++V + +       +    D ++ +   +R  ++
Sbjct: 203 APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score =  130 bits (327), Expect = 5e-36
 Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 16/201 (7%)

Query: 9   MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
           +  +ILD  GT ++   +           + G E    E  + +G    E    ++ +  
Sbjct: 14  VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSR 73

Query: 68  LP---------CAKHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALA 113
           +           +  E +  +Y +F+    +      + +PG   +   L   G+ +   
Sbjct: 74  IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGN 133

Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIE 172
           +      +   +        + +  V + +V  G+P PD+ L+ A  L +   +  + ++
Sbjct: 134 TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVD 193

Query: 173 DSVIGVVAGKAAGMEVVAVPS 193
           D++ G+  G  AGM  V V  
Sbjct: 194 DTLPGIEEGLRAGMWTVGVSC 214

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score =  117 bits (295), Expect = 2e-31
 Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 43/248 (17%)

Query: 11  CVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL- 68
            VI    GT ++       EV      K G      E  K +G   ++    + E   + 
Sbjct: 8   AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67

Query: 69  --------PCAKHEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASN 115
                          + E+Y  F + L          + G   +I  L   G+ +   + 
Sbjct: 68  SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127

Query: 116 SHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIED 173
             R  ++     +          +V  D+V  G+P P +  + A  L + P +  + + D
Sbjct: 128 YTREMMDIVAK-EAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186

Query: 174 SVIGVVAGKAAGMEVVAVPS-------LPKQTHRYTA------------------ADEVI 208
           +V  +  G+ AGM  V V           ++     +                  A   I
Sbjct: 187 TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246

Query: 209 NSLLDLRP 216
            ++ +L  
Sbjct: 247 ETMQELES 254

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score =  116 bits (292), Expect = 2e-31
 Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%)

Query: 12  VILDLDGTLLNT-DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
           VI D   TL++T   +        L + G +    +    +  + + +  I +       
Sbjct: 28  VIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDS---IPNSTIPKYLITLLGKRWKE 84

Query: 71  AKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
           A   + N +  S  SD+        GA  L+  L  + + MA+ SN +   +     +  
Sbjct: 85  ATILYENSLEKSQKSDN---FMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHK 140

Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEV 188
                F  I+GS +  T KPSP+  L A   +N+EPS     I DS+  + +   AG   
Sbjct: 141 NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP 200

Query: 189 VAVP--SLPKQTHRYTAADEVINSLLDL 214
           +     ++ K    +    ++ N +  L
Sbjct: 201 IKYGSTNIIKDILSFKNFYDIRNFICQL 228

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score =  114 bits (288), Expect = 3e-31
 Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 14/189 (7%)

Query: 7   KLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
           K M     I DL GTLL+     +      L  YG   D    ++ +  +        +E
Sbjct: 2   KGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVS----TPFAIE 57

Query: 65  DYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
            +       E   E Y               G + L++ +S  G    L S+ +   +E 
Sbjct: 58  TFA---PNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE- 113

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
            I  +      F+ +V S      KP+P+  L   ++  +     LVI D  I + AG+A
Sbjct: 114 -ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQA 170

Query: 184 AGMEVVAVP 192
           AG++     
Sbjct: 171 AGLDTHLFT 179

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* Length = 163

 Score =  113 bits (284), Expect = 6e-31
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 8/100 (8%)

Query: 210 SLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDV 269
           +L + RPE  G        E      P    G VV G GRGSK LGIPTAN+S +   ++
Sbjct: 4   NLEEKRPEIVG-------PEKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQEL 56

Query: 270 LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTI 309
           L    SGVYFG+A +  R V+ MVMS+GWNPY+ N  ++ 
Sbjct: 57  LRYRDSGVYFGYAMVQKR-VFPMVMSVGWNPYYKNKLRSA 95

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score =  113 bits (286), Expect = 1e-30
 Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 15/208 (7%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPC 70
            I DLDGTLL++       ++    ++   +D  +  + + K  +++    + ED  L  
Sbjct: 7   FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL-- 64

Query: 71  AKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQ 128
              E +N+V +        +V  +PGA  ++      G+   + ++  + A     I   
Sbjct: 65  -DVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF---TILKD 120

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
            G    F+ I+ S      KPSP+       +  +   ++  I D  + V   + +G++ 
Sbjct: 121 LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 180

Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRP 216
           +               +  I +L D+  
Sbjct: 181 INF------LESTYEGNHRIQALADISR 202

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* Length = 147

 Score =  111 bits (281), Expect = 1e-30
 Identities = 35/74 (47%), Positives = 54/74 (72%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 296 IGWNPYFDNAEKTI 309
           IGWNPY+ N +K++
Sbjct: 64  IGWNPYYKNTKKSM 77

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score =  113 bits (284), Expect = 4e-30
 Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 19/224 (8%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLP 69
             + D D TL ++        ++ L ++G      +   + +GK  LEE+  I+      
Sbjct: 8   VYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGK-TLEESFSIL----TG 62

Query: 70  CAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIES 123
               + +      +S              P     + HL   G+ + + S       +  
Sbjct: 63  ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL-- 120

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
                H  ++ F +I+G ++V   KP P+  L A  RL   P   L I DS +      A
Sbjct: 121 SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180

Query: 184 AGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 222
           AG+    V S     Q  +    D +I++L  L     +K G P
Sbjct: 181 AGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score =  111 bits (280), Expect = 9e-30
 Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 15/211 (7%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP 69
            ++ D+DGTL N+   ++ V++  L  YGK +   +  K             + E  G+ 
Sbjct: 6   ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA----EQAMTE-LGIA 60

Query: 70  CAKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISY 127
            ++ +     Y  + + H  +++  PG   L + L    + + + ++             
Sbjct: 61  ASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQRRNELE--SGMR 117

Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
            + +    +V + +D+    KP P   L A +++N+ P ++L I DSV      +AA ++
Sbjct: 118 SYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177

Query: 188 VVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
                    P   H+           LD+  
Sbjct: 178 FGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score =  107 bits (269), Expect = 5e-28
 Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 17/224 (7%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           + L   V+ D+DGTLL  + M   VL   L++          H   GK        ++ +
Sbjct: 4   RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60

Query: 66  YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHG-VPMALASNSH 117
            GL  A+  +  ++    +            +  L G   L+  LS    V + L + + 
Sbjct: 61  VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 120

Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDS 174
            A+   K+    G +  F     +D+       P I LE A+R+   N  PS  ++I D+
Sbjct: 121 EASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDT 179

Query: 175 VIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
              +   +      +AV +     +         +  +  +   
Sbjct: 180 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score =  105 bits (263), Expect = 4e-27
 Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 24/226 (10%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYG---------------KEWDGREKHKIVGKTP 55
            V  D+  TLL+ + M  E         G               +    R +     +  
Sbjct: 6   LVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKV 65

Query: 56  LEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
           L  +   +     +     E V    +    ++ +   L G    ++ +   G+  A+  
Sbjct: 66  LTGSQEALAGKLKVD---VELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIG 122

Query: 115 N---SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
           N      +     +  + G  E       +DEV + KP  ++F +      ++P  SL I
Sbjct: 123 NVMFWPGSYTRLLLE-RFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI 181

Query: 172 EDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
            D+        +  GM  V +     +  +       I S+ +L+ 
Sbjct: 182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKD 227

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score =  104 bits (261), Expect = 8e-27
 Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 21/220 (9%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GKTPLEEA 59
           +  DLD TL++T  +     K  +    +     +                       + 
Sbjct: 5   IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFD- 63

Query: 60  AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHR 118
             ++    LP    ++++     + +     ++ +PGA +++  L   G  + + ++ + 
Sbjct: 64  -YLLRRLDLP-YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
                KI  +   ++ F  ++ SD     KP P IF +A K  N++P  +L++ D +   
Sbjct: 122 VKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSD 180

Query: 178 VVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 214
           +   K  GM+ V         ++      AD  I++L  L
Sbjct: 181 IYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score =  103 bits (258), Expect = 2e-26
 Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 15/192 (7%)

Query: 7   KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
            L + V+ DLDGTL ++    ++ +K  L K+  + +     +K VG  PL+ +   +E 
Sbjct: 2   SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGP-PLKTS--FMEY 58

Query: 66  YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
           Y       E        + D+     + + K   G   L+  L  +G  + +A++     
Sbjct: 59  YNFD---EETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVF 115

Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
           +   +I         F  IVGS          D+   A + LN++   +++I D    V+
Sbjct: 116 SK--QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVI 173

Query: 180 AGKAAGMEVVAV 191
                 +  + V
Sbjct: 174 GALKNNLPSIGV 185

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score =  102 bits (256), Expect = 3e-26
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 22/206 (10%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
            + D+DGTL      F+ + +          +      +    P +E+A          A
Sbjct: 9   WVFDMDGTLTIAVHDFAAIREAL----SIPAEDDILTHLAA-LPADESA----------A 53

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
           KH ++ E     +      +  PGA  L++ L+  G  + + + + R      +    G 
Sbjct: 54  KHAWLLEHERDLAQGS---RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLE-AIGL 109

Query: 132 NESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
            + F+   V   +    KP P   L+ A+  ++ PS  +++ D    +  G+AAG   V 
Sbjct: 110 ADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169

Query: 191 VPSLPKQTHRYTAADEVINSLLDLRP 216
           V             D        LR 
Sbjct: 170 VN--LPDNPWPELTDWHARDCAQLRD 193

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} Length = 181

 Score =  101 bits (253), Expect = 3e-26
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 9/95 (9%)

Query: 224 FQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGY-SDVLSEHPSGVYFGWA 282
               +  T   +P+++ G VV G GRG   LG PTAN+  +    + L  + + V +GW 
Sbjct: 5   HHHHMRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYKNLVVYGWG 64

Query: 283 GLSTR--------GVYKMVMSIGWNPYFDNAEKTI 309
            +S          G Y    SIG+N  FD    T+
Sbjct: 65  TVSQVPGKERESFGPYPFAASIGFNMQFDEKTLTV 99

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 99.0 bits (247), Expect = 4e-25
 Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 34/217 (15%)

Query: 9   MSCVILDLDGTLLNTDG----------MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE 58
           +  +  D+ G LL               F      F  ++       E     G+  L E
Sbjct: 4   IKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELEL----GRMTLAE 59

Query: 59  A-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
               +V          +F   +           +  P    L + L      M   +N  
Sbjct: 60  YLEQVVFYQPRDFTPEDFRAVMEEQS-------QPRPEVLALARDLG-QRYRMYSLNNEG 111

Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
           R   E +I    G  E       S  +   KP+P ++        + P  +++++D +  
Sbjct: 112 RDLNEYRIR-TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQN 170

Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           V A +A GM             +   A ++   L  L
Sbjct: 171 VQAARAVGM----------HAVQCVDAAQLREELAAL 197

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137

 Score = 96.3 bits (240), Expect = 8e-25
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)

Query: 91  KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
           +       L+     +GV   + SN       + I  +   N     ++ S E+   KP 
Sbjct: 18  EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPE 76

Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
              F  AA  +++     ++++DS++ V     AG+  V      +       A   I  
Sbjct: 77  EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVG 129

Query: 211 LLDLRPE 217
           L  L  E
Sbjct: 130 LFGLEGE 136

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 99.1 bits (247), Expect = 1e-24
 Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 31/234 (13%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYG--------------------KEWDGREKHKI 50
            +  D+  TLL       E   T    +G                      +        
Sbjct: 3   LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62

Query: 51  VGKTPLEEAAI--IVEDYGLPCAK--HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH 106
           +         +       G+  A+       ++Y  FS   C  + L GA   ++     
Sbjct: 63  LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP-CTWQVLDGAEDTLRECRTR 121

Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
           G+ +A+ SN     +E  +    G  E F  ++ S+     KP P IF EA +  +MEP 
Sbjct: 122 GLRLAVISNFD-RRLEGILG-GLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV 179

Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINSLLDLRP 216
            +  + D+ +      +A GM    V    +L          + ++ SL  L P
Sbjct: 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 96.6 bits (241), Expect = 3e-24
 Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 34/216 (15%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-------------WDGREKHKIVGKTPLEE 58
            I DL   +++ D  F+ VL  +                    +   E+ +I   +    
Sbjct: 10  YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEI---SDEAF 64

Query: 59  AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
           A  +  +  LP +  +F +   ++F          P    ++  L   G  + + SN++R
Sbjct: 65  AEALCHEMALPLSYEQFSHGWQAVFVA------LRPEVIAIMHKLREQGHRVVVLSNTNR 118

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
                         ++   I  S ++   KP   I+    +     PS ++  +D+   +
Sbjct: 119 LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNI 178

Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
                 G+           +        + +    +
Sbjct: 179 EGANQLGI----------TSILVKDKTTIPDYFAKV 204

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 96.3 bits (240), Expect = 6e-24
 Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 24/217 (11%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT------PLEEA----- 59
            V++D   TL+    +F E +   L   G + D R+  +   K       P E+      
Sbjct: 5   AVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVD 64

Query: 60  -AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
               +   G+       V E+                    ++ L  +G  +AL SN+  
Sbjct: 65  PKDFLYILGIY-PSERLVKELKEADIRDGE-AFLYDDTLEFLEGLKSNGYKLALVSNAS- 121

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
             +++ +  +    + F  +  S E++  KP+P IF  A  ++      ++ + D     
Sbjct: 122 PRVKTLLE-KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---AVHVGDIYELD 177

Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
            +  K + ++ + +     +   Y    + + +L + 
Sbjct: 178 YIGAKRSYVDPILL----DRYDFYPDVRDRVKNLREA 210

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 96.1 bits (240), Expect = 7e-24
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 22/217 (10%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYG 67
           +  ++ DLDGTL+++    +  L+  L + G E    +   K +G         ++E   
Sbjct: 3   LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGG----VRALLEK-V 57

Query: 68  LPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATI 121
           L     +F  E   +F  H     +   K  P     ++ L   G  +A+ SN     + 
Sbjct: 58  LK---DKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114

Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
             KI      +  F +IVG D     KPSP   L+  + L  EP  +L++ D+   + AG
Sbjct: 115 --KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172

Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
           K AG +        +   +      D  ++   DL  
Sbjct: 173 KRAGTKTALALWGYVKLNSQI---PDFTLSRPSDLVK 206

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260

 Score = 96.8 bits (241), Expect = 9e-24
 Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 28/235 (11%)

Query: 6   KKLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------ 51
             L     V  DLD TL++T G     +   +     ++  +E+ +I+            
Sbjct: 13  MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 72

Query: 52  ---GKTPLEEA-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKH 102
                T + +         +++        +   E Y ++     + +        ++  
Sbjct: 73  FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132

Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162
           L    V + L +N  R T   KI         F  IV   E +  KP+P IF      L 
Sbjct: 133 LR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG 190

Query: 163 MEPSSSLVIEDSVIG-VVAGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 214
           ++P   +++ D++   +  G  AG++  V    S             +++S+L+L
Sbjct: 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 95.4 bits (238), Expect = 2e-23
 Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 19/198 (9%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
           M +  +     V+ DLDGTL +     ++ ++  L  +G + D     + +G  PL +  
Sbjct: 25  MKKNYE----IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGP-PLHDT- 78

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN 115
              E Y       +   E    + ++     + + K       +++ L  +G  + +A++
Sbjct: 79  -FKEYYKFE---DKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATS 134

Query: 116 -SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-EPSSSLVIED 173
                     I      +  F  I GS+   T     ++        N+ +    +++ D
Sbjct: 135 KPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD 192

Query: 174 SVIGVVAGKAAGMEVVAV 191
               ++  K  G++ + V
Sbjct: 193 RKYDIIGAKKIGIDSIGV 210

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 94.4 bits (235), Expect = 3e-23
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 36/223 (16%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEE-AA 60
           ++ DL G L++ +    E ++ F      + +       +          G+   EE   
Sbjct: 8   IVFDLGGVLIHLN--REESIRRFKAIGVADIE-EMLDPYLQKGLFLDLESGRKSEEEFRT 64

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            +    G      +  + +     +       +                + L SN++   
Sbjct: 65  ELSRYIGKELTYQQVYDALLGFLEE-------ISAEKFDYIDSLRPDYRLFLLSNTNPYV 117

Query: 121 IESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
           ++  +S +        +  F  +  S ++   KP+ DIFLE      M+P  +L I+D  
Sbjct: 118 LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGP 177

Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
             V   +  G            T+     +  I ++  L  E+
Sbjct: 178 ANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238

 Score = 94.4 bits (235), Expect = 4e-23
 Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 24/223 (10%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIV----------GKTPLEE 58
            ++ D+D T+L+     +  L+            D + ++K +          GK   +E
Sbjct: 9   TLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDE 68

Query: 59  A-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
                 + ++++YG          + Y  F +   ++  + GA  LI +L      + + 
Sbjct: 69  VVNTRFSALLKEYGYEADGALL-EQKYRRFLEEGHQL--IDGAFDLISNLQ-QQFDLYIV 124

Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
           +N    T   ++    G    F  I  S++    KP  + F    +R+       +L+I 
Sbjct: 125 TNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIG 183

Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           DS+   +  G+ AG++   +    K           I  L +L
Sbjct: 184 DSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 93.0 bits (232), Expect = 7e-23
 Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 20/192 (10%)

Query: 7   KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
             ++ +  DLDGTL+++             + G      +     +G  PLE +      
Sbjct: 2   TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGP-PLESS---FAT 57

Query: 66  YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
             L     + ++E   ++  +     + + +  P    L++ LS    P+ + +      
Sbjct: 58  C-LS---KDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELS-SSYPLYITTTKDTST 112

Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
                ++     +  F  I GS          D+  +A +   + P  +++I D+   ++
Sbjct: 113 AQ--DMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDML 168

Query: 180 AGKAAGMEVVAV 191
             +  G++ +A+
Sbjct: 169 GARETGIQKLAI 180

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 93.8 bits (234), Expect = 9e-23
 Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 14/218 (6%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGK---TPLEEAAIIVEDY 66
            +  DLDGTL+N+    +  + + L                +G       + A       
Sbjct: 25  LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 84

Query: 67  GLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRAT 120
                  +        F  +         +  P     ++ L   G  +A+ +N   +  
Sbjct: 85  AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 144

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
               I    G +  FS ++G   +   KP P  F     +  + P   L + DS   + A
Sbjct: 145 Q--PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFA 202

Query: 181 GKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
             +AG  VV +            +  D + +   D+  
Sbjct: 203 AHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 92.0 bits (229), Expect = 4e-22
 Identities = 47/233 (20%), Positives = 81/233 (34%), Gaps = 30/233 (12%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYG----------KEW--DGREK-------HKIV 51
             I D+DGT+L+T    +  L     + G          K +   G          ++  
Sbjct: 6   AAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAG 65

Query: 52  GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCH 106
                  A    ++          VN V  +F  +       K    PG   L+K+L   
Sbjct: 66  SSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQK 125

Query: 107 GVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165
           GV +A+ SN  + A        +  +  SF   +G       KP+PD+  E  K L +  
Sbjct: 126 GVKLAVVSNKPNEAVQVLV---EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPR 182

Query: 166 SSSLVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
              + I DS I +   + + M+ +AV          +   A  ++++   L  
Sbjct: 183 DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 85.4 bits (211), Expect = 4e-20
 Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 90  VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149
            +  PGA   +K L   G+P A       A      +           ++ +     G P
Sbjct: 35  AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWP 88

Query: 150 SPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 192
            PD    A   LN+      ++I      + +G  AG+  + + 
Sbjct: 89  QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234

 Score = 85.5 bits (212), Expect = 7e-20
 Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 25/223 (11%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYG------------------KEWDGREKHKIVGK 53
           V  D  GTL + +G     LK      G                  + +           
Sbjct: 5   VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY--- 61

Query: 54  TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMAL 112
            PL +    V          ++    + +      +   L P    ++K L      + +
Sbjct: 62  RPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLK-GKYHVGM 120

Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
            ++S      + +    G  + F  I  S+E    KP P IF  A K+  ++   ++ + 
Sbjct: 121 ITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVG 179

Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           D+ +      K  GM  + +    ++   +   D +++ L ++
Sbjct: 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240

 Score = 82.1 bits (203), Expect = 1e-18
 Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 26/226 (11%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--------------------WDGREKHKI 50
            +  DLD T+        +  +    KY  +                    W    + K+
Sbjct: 7   NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66

Query: 51  VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVP 109
             K  L           +              F   +  K   +P A  ++++L+     
Sbjct: 67  -TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYN 124

Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
           + + SN  R     K+    G +  F  I+ S+++   KP P+IF  A      E   SL
Sbjct: 125 LYILSNGFRELQSRKMR-SAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183

Query: 170 VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           +I DS    +      GM         +    +      I+SL +L
Sbjct: 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQ-PTYHIHSLKEL 228

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 81.4 bits (201), Expect = 2e-18
 Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 36/216 (16%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEEA-A 60
           +++DL G L+N D      ++ F  K G +    +               G     E   
Sbjct: 31  LLIDLGGVLINLD--RERCIENFK-KIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRD 87

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            I E  G   +  +      S   D       +P     +         + L SN++   
Sbjct: 88  GIREMMGKMVSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVVYLLSNTNDIH 140

Query: 121 IE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
            +     +         + F     S E++  KP P+IF    +   ++P  +  I+DS 
Sbjct: 141 WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSE 200

Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211
           I     +  G+           T+   A ++  +  
Sbjct: 201 INCKVAQELGI----------STYTPKAGEDWSHLF 226

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234

 Score = 77.2 bits (190), Expect = 7e-17
 Identities = 44/234 (18%), Positives = 83/234 (35%), Gaps = 34/234 (14%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKE--------WDGREKHKIVGKT 54
           K+L+  +  D D TL + +  F EV K +   L  YG                 +I+G  
Sbjct: 5   KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYG 64

Query: 55  P------LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHG 107
                  + E A+ + +  +     + + ++  +    L   ++ LPG    +K L   G
Sbjct: 65  AKAFTISMVETALQISNGKIA---ADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETG 121

Query: 108 -VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
              + +A+       E+K+  + G +  F  I    +      +   +L     L + PS
Sbjct: 122 KYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVMSD-----KTEKEYLRLLSILQIAPS 175

Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEV-----INSLLDL 214
             L++ +S    +    + G   V +P      H  T          +  L DL
Sbjct: 176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 79.1 bits (194), Expect = 9e-17
 Identities = 30/245 (12%), Positives = 66/245 (26%), Gaps = 46/245 (18%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA--------AIIV 63
            +  LD   +  + +++ + +    +           K    T  +E          +  
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192

Query: 64  EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
           +                + +      ++ +     L+  L   G  + +A+         
Sbjct: 193 DVEK-----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247

Query: 124 KISYQHGWNESFSV--IVGSDEVRT-----------GKPSPDIFLEAAKRLN-------- 162
                 G    F    I  + +V             GKP+P  ++ A    N        
Sbjct: 248 PFE-NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306

Query: 163 ------MEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSL 211
                 +      ++ DS+  +++ +  G   +                   AD VIN L
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366

Query: 212 LDLRP 216
            +LR 
Sbjct: 367 GELRG 371

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 17/216 (7%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREK-------HKIVGK-TPLEEAA 60
           +  DL GTL +   +     + F  +       W  R+K         ++ +    ++A 
Sbjct: 7   IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALW--RQKQLEYTWLRSLMNRYVNFQQAT 64

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
                +       +      S   D   ++         ++ L   G+ +A+ SN    +
Sbjct: 65  EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           I++ +S+  G  + F  ++  D V+  KP   ++  A + L ++ S+ L +  +      
Sbjct: 125 IDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATG 183

Query: 181 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
            +  G     +       +       D  + SL  +
Sbjct: 184 ARYFGFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 73.3 bits (179), Expect = 2e-15
 Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 20/215 (9%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---EKHKIVGKTPLEEAAIIVEDYG 67
             + D D TLL+ D + +++    + ++G +   R       +  +    +    ++ Y 
Sbjct: 13  VFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYR 72

Query: 68  LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
           L   +   +  + S   D+    +  PGA   ++HL   G P  + S+        KI+ 
Sbjct: 73  LEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA- 130

Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-GM 186
           + G  +        +         ++ L+            ++++D +  + A K A G 
Sbjct: 131 RSGLWDEV------EGRVLIYIHKELMLDQVMEC-YPARHYVMVDDKLRILAAMKKAWGA 183

Query: 187 EVVAV-------PSLPKQTHRYTAADEVINSLLDL 214
            +  V          PK+   +  AD  +  + DL
Sbjct: 184 RLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240

 Score = 72.2 bits (177), Expect = 5e-15
 Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 15/215 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKH-------KIVGK-TPLEEAA 60
            + D  GTLL+                      W  R++         ++ +     +  
Sbjct: 17  CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLW--RQRQLEYSWTRTLMHQYADFWQLT 74

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
                + L     E    +         ++ A P A   ++ L   G  +A+ SN +   
Sbjct: 75  DEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEM 134

Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
           +++ +      +      + +D+++  KP P I+  A  RL + P+    +  +   +  
Sbjct: 135 LQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGG 193

Query: 181 GKAAGMEVVAVP-SLPKQTHRYTAADEVINSLLDL 214
               G   V +        + +      +NSL +L
Sbjct: 194 AGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282

 Score = 72.1 bits (176), Expect = 1e-14
 Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 18/230 (7%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTD-GMFSEV---LKTFLV-KYGKEWDG-REKHKIVGKT 54
            A P    +     D+D  L  +   +   +   +  F         +     +    K 
Sbjct: 49  SATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKE 108

Query: 55  PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL-- 112
                  +V  +          N +          +K       ++  L   G    L  
Sbjct: 109 YGLAIRGLVMFHK---VNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWL 165

Query: 113 ---ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 168
              A  +H       +     ++          +    KP    F +A K   +    + 
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENA 225

Query: 169 LVIEDSVIGVVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDLR 215
             I+DS   +  G   GM+         + +   +      VI+ +L+L 
Sbjct: 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251

 Score = 69.7 bits (170), Expect = 5e-14
 Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 32/239 (13%)

Query: 1   MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGR------------ 45
           +AQ   + +  V  D D TL  ++  +      F   L  Y    D R            
Sbjct: 5   IAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRN 64

Query: 46  -EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHL 103
            +      K           +      +   +  +  +    L   V+ + G    +  +
Sbjct: 65  LKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAI 124

Query: 104 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163
           +     + L +       E KI  Q G ++ F  I         +  P  +       ++
Sbjct: 125 A-ADYAVVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDL 177

Query: 164 EPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-------INSLLDL 214
                ++I +S+   V    A G   +  P      H               +      
Sbjct: 178 PAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253

 Score = 69.2 bits (169), Expect = 8e-14
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 33/234 (14%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEW-----------DGREKHK---IVGKT 54
           V+ D  GTL +   +     + +  +     + W               ++     V + 
Sbjct: 5   VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64

Query: 55  PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
            L          GL   +  F+ ++   ++       A      L        +  A+ S
Sbjct: 65  ALAYTL---GTLGLEPDE-SFLADMAQAYNRLTPYPDAAQCLAEL------APLKRAILS 114

Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174
           N     +++ ++   G  +SF  ++  D  R  KP PD +    + L + P+  L +  +
Sbjct: 115 NGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173

Query: 175 VIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
              V   K  G  V  V      +L ++    T A   +   L +R E +   P
Sbjct: 174 GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261

 Score = 69.1 bits (168), Expect = 9e-14
 Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 6/136 (4%)

Query: 83  FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVG 140
           F+    K +        ++     G+ + + S+      +    +  +    E       
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF- 180

Query: 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQT 198
            D     K   + + + A  +    ++ L + D      A + A + V  V  P     T
Sbjct: 181 -DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLT 239

Query: 199 HRYTAADEVINSLLDL 214
                   +I S  +L
Sbjct: 240 DDEKTYYSLITSFSEL 255

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189

 Score = 64.4 bits (157), Expect = 1e-12
 Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 18/143 (12%)

Query: 89  KVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD--- 142
           +V     A   ++ +   G   A+ SN   S    I+  ++   G  + F  I  S+   
Sbjct: 32  EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSEL 90

Query: 143 -EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AV 191
              +  KP   IF      L ++ + ++++ ++    ++    AG+  +           
Sbjct: 91  QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150

Query: 192 PSLPKQTHRYTAADEVINSLLDL 214
             LP     +      +  + + 
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEA 173

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 64.8 bits (158), Expect = 2e-12
 Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-------------------KHKIVG 52
           +  D  GTL++ +      L+    + GK +   E                    ++ + 
Sbjct: 9   LTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDIL 68

Query: 53  KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
           +   +  A   +++GL     E        F   +    A P     +++L      + +
Sbjct: 69  RAVYDRIA---KEWGLEPDAAER-----EEFGTSVKNWPAFPDTVEALQYLK-KHYKLVI 119

Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF---LEAAKRLNMEPSSSL 169
            SN  R   +   +        F  I+ + +V + KP+P+ F   ++A  +  +E    L
Sbjct: 120 LSNIDRNEFKLSNA---KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDIL 176

Query: 170 VIEDSVIG-VVAGKAAGMEVV--------AVPSLPKQTHRYTAADEVINSLLDL 214
              +S+    +    AG+                     R    D   NS+ ++
Sbjct: 177 HTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae} Length = 308

 Score = 62.9 bits (154), Expect = 2e-11
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 294
           P    G VV G  RG   +G PTANL     + +    P  GVY     +  +  Y+ + 
Sbjct: 189 PLPSRGMVVHGNARGRT-IGYPTANLVLLDRTYM----PADGVYVVDVEIQRQ-KYRAMA 242

Query: 295 SIGWNPYFDNAEKTI 309
           S+G N  FD  E   
Sbjct: 243 SVGKNVTFDGEEARF 257

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes} Length = 338

 Score = 61.0 bits (149), Expect = 8e-11
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 14/85 (16%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRG------- 288
            +Y+ GPVV+G GRG K LG PTAN        +      GVY GW  +           
Sbjct: 186 HFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALP---ADGVYAGWLTILPTEAPVSGNM 242

Query: 289 ----VYKMVMSIGWNPYFDNAEKTI 309
                Y   +S+G NP F + ++++
Sbjct: 243 EPEVAYAAAISVGTNPTFGDEQRSV 267

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A Length = 293

 Score = 60.2 bits (147), Expect = 1e-10
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP-SGVYFGWAGLSTRGVYKMVM 294
            + I G V K    G K LG PTAN+       V       GVY     L        VM
Sbjct: 159 YFEIEGIVHKDREFGRK-LGFPTANIDRGNEKLVD---LKRGVYLVRVHLPDGKKKFGVM 214

Query: 295 SIGWNPYFDNAEKTIV 310
           ++G+ P   +A     
Sbjct: 215 NVGFRPTVGDARNVKY 230

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201

 Score = 54.5 bits (131), Expect = 5e-09
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           +  D+ GT+L+T  +  E     L +Y        K+    +        I++  G    
Sbjct: 4   LAFDIFGTVLDTSTVIQEFRNKQL-EYTWLLTIMGKYVEFEEITKITLRYILKVRGEESK 62

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
             E +        +    +KA      L +        +   SN     ++  +  ++G 
Sbjct: 63  FDEEL--------NKWKNLKAYEDTKYLKEISEIA--EVYALSNGSINEVKQHLE-RNGL 111

Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
              F  I  ++ V+  KPSP ++      +      + ++  +   V+  K AGM  + V
Sbjct: 112 LRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFV 169

Query: 192 --PSLPKQTHRYTAADEVINSLLDL 214
              +           D ++N   +L
Sbjct: 170 NRKNTIVD-PIGGKPDVIVNDFKEL 193

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187

 Score = 53.5 bits (128), Expect = 9e-09
 Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 46/188 (24%)

Query: 5   LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
           + +L    + DLD TL                     W       +           + +
Sbjct: 23  MARLPKLAVFDLDYTL---------------------WPFWVDTHVDPPFHKSSDGTVRD 61

Query: 65  DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
             G                      V+  P    ++K L   GVP A AS +      ++
Sbjct: 62  RRG--------------------QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQ 101

Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
           +         F                  F    ++  +  S  +  +D    +V     
Sbjct: 102 LLELFDLFRYFVHREIYPG-----SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKL 156

Query: 185 GMEVVAVP 192
           G+  + + 
Sbjct: 157 GVTCIHIQ 164

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 205
           KP P + L A   L+++ ++S ++ D +  + A  AA +   V V +  P       AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190

Query: 206 EVINSLLDL 214
            V+NSL DL
Sbjct: 191 WVLNSLADL 199

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555

 Score = 50.3 bits (120), Expect = 3e-07
 Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 12  VILDLDGTLL--NTDGMFSEV----------LKTFLVKYGKEWDGREKHKIVGKTPLEEA 59
            + DLDG L      G+              L     K G   +G     + G+  L + 
Sbjct: 6   AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGP--EGATTRLMKGEITLSQW 63

Query: 60  AIIVEDYGLPCAKHEFVN-----EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
             ++E+    C++   V       +  +F   +   K      +    L   G   A+ +
Sbjct: 64  IPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILT 123

Query: 115 NS---HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
           N+    RA  +            F  ++ S +V   KP P I+      L   PS  + +
Sbjct: 124 NTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFL 183

Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPK 196
           +D    +   +  GM  + V     
Sbjct: 184 DDIGANLKPARDLGMVTILVQDTDT 208

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 203
           KP P ++ + A+R +++ +    + DS+  + A   AG     V +              
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160

Query: 204 ADEVINSLLD 213
              V   L  
Sbjct: 161 GTRVCEDLAA 170

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
           GKP    FLEA +  +  P  +++I D     V   +  GM  + V     +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232

Query: 206 E---------VINSLLDL 214
           E            S    
Sbjct: 233 EEKINPPPYLTCESFPHA 250

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
           GKPSP+ F  A + + +E   +++I D ++G V   +  GM  + V     +T ++  +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243

Query: 206 E---------VINSLLDL 214
           E          +++L + 
Sbjct: 244 EHHPEVKADGYVDNLAEA 261

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 202
           KP+P + +EA KRL ++   SL++ D +  + AGK AG+    +        P    R  
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196

Query: 203 AADEVINSLLD 213
                +  LL 
Sbjct: 197 RDSSELGDLLA 207

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253

 Score = 42.5 bits (99), Expect = 7e-05
 Identities = 8/67 (11%), Positives = 19/67 (28%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
           K     +    + +  + S  L + D+ + + A    G+                   +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246

Query: 208 INSLLDL 214
             +   L
Sbjct: 247 YKNFETL 253

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 35/279 (12%), Positives = 77/279 (27%), Gaps = 90/279 (32%)

Query: 27  FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86
           + ++L  F   +   +D ++                V+D      K     E      DH
Sbjct: 18  YKDILSVFEDAFVDNFDCKD----------------VQDM----PKSILSKEEI----DH 53

Query: 87  LCKVK-ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145
           +   K A+ G  RL   L              +  +E  +   + +      ++   +  
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQ------EEMVQKFVEEVLRINYKF------LMSPIKTE 101

Query: 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
             +PS    +   +R  +   + +  + +V                        R     
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNV-----------------------SRLQPYL 138

Query: 206 EVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKG-LGRGSKVLGIPTANLSTE 264
           ++  +LL+LRP K                    +   ++ G LG G   + +        
Sbjct: 139 KLRQALLELRPAK-------------------NV---LIDGVLGSGKTWVALDVCL---- 172

Query: 265 GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFD 303
               V  +    ++  W  L      + V+ +     + 
Sbjct: 173 -SYKVQCKMDFKIF--WLNLKNCNSPETVLEMLQKLLYQ 208

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
           GKP   I   A   L +E    +++ D+    I   +G   G++ + V S       +P 
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239

Query: 197 QTHRYTAADEVINSLLDLRPE 217
                     V++SL +   E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186
           KP   +         M+ ++S VI D    +   +  G+
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	313
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	100.0
3op1_A	308	Macrolide-efflux protein; structural genomics, PSI	100.0
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.98
2x0k_A	338	Riboflavin biosynthesis protein RIBF; riboflavin k	99.98
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.97
1mrz_A	293	Riboflavin kinase/FMN adenylyltransferase; rossman	99.97
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.97
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.97
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.97
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.97
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.96
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.96
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.96
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.96
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.96
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.96
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.96
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.96
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.96
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.96
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.96
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.96
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.95
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.95
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.95
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.95
3bnw_A	181	Riboflavin kinase, putative; APO structure, struct	99.95
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.95
1n08_A	163	Putative riboflavin kinase; phophoryl transferases	99.95
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.95
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.95
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.95
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.94
1nb0_A	147	Hypothetical protein FLJ11149; beta barrel, transf	99.94
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.94
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.94
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.94
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.94
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.94
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.94
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.94
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.93
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.93
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.93
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.93
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.93
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.93
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.93
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.93
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.93
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.93
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.93
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.93
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.92
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.92
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.92
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.92
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.91
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.91
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.91
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.91
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.91
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.91
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.9
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.9
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.88
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.88
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.87
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.87
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.87
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.86
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.85
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.85
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.84
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.84
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.83
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.82
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.82
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.82
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.81
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.8
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.79
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.78
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.78
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.78
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.77
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.77
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.77
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.76
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.76
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.75
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.74
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.74
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.74
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.73
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.73
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.72
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.71
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.71
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.69
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.69
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.69
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.69
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.69
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.69
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.68
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.68
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.68
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.66
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.65
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.65
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.63
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.43
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.61
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.59
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.58
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.57
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.56
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.54
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.53
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.52
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.49
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.49
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.49
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.47
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.46
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.39
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.35
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.35
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.34
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.32
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.29
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.21
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.19
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.18
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.14
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.12
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.06
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.05
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.02
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.94
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.94
4gxt_A	385	A conserved functionally unknown protein; structur	98.81
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.8
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.53
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	98.52
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.44
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.43
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	98.41
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.35
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.22
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.99
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.85
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.78
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.76
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	97.73
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.54
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.54
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.54
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.42
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.18
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.13
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.12
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	96.93
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	96.79
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.32
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.24
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.89
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.13
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	94.85
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	93.58
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	93.4
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	92.08
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	91.27
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	88.29
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	87.99
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	84.31
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	82.96
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	82.81
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	80.39

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.4e-31  Score=225.13  Aligned_cols=218  Identities=40%  Similarity=0.613  Sum_probs=193.5

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      ++++|+|+||+||||+++...+..++.++++++|...+........|.........+++.++...+...+...+.+.+..
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE  106 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999988888888889999998999999999888888887777777777


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC--CCCCCCCChHHHHHHHHHcCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~--~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ......++|++.++|+.|++.|++++++||++...+...+.+..++..+|+.+++++  ++..+||+++.++.+++++|+
T Consensus       107 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  186 (250)
T 3l5k_A          107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP  186 (250)
T ss_dssp             HGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred             HhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence            777889999999999999999999999999998877776744568889999999999  888999999999999999999


Q ss_pred             CC--CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCC
Q 021360          164 EP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPP  223 (313)
Q Consensus       164 ~~--~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~  223 (313)
                      ++  ++|++|||+.+|+.+|+.+|+.++++.++.........++.+++++.++.....++++
T Consensus       187 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~~  248 (250)
T 3l5k_A          187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPS  248 (250)
T ss_dssp             CCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCCC
T ss_pred             CCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCCC
Confidence            98  9999999999999999999999999998765555566899999999998766655443

>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}

Probab=100.00  E-value=2.7e-34  Score=245.09  Aligned_cols=171  Identities=24%  Similarity=0.297  Sum_probs=128.7

Q ss_pred             HHHHHHHHHHCCCCEEEE--------eCCchHHHHHHHHhhcCCccccceEEecCCCCCC--CCChHHHHHHHHHcCCCC
Q 021360           96 ANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRTG--KPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        96 v~e~l~~l~~~g~~~~i~--------s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~--kp~~~~~~~~~~~~~~~~  165 (313)
                      ..+-++.|++.|+...++        ..++++|++..+ ..+++    +.+++|+|+..+  +++.+.+++..+.   + 
T Consensus        81 ~~eK~~ll~~lGVD~v~~~~F~~~~a~ls~e~Fv~~ll-~~l~~----~~ivvG~DfrFG~r~G~~~~L~~~~~~---~-  151 (308)
T 3op1_A           81 PAERERKLKREGVEELYLLDFSSQFASLTAQEFFATYI-KAMNA----KIIVAGFDYTFGSDKKTAEDLKNYFDG---E-  151 (308)
T ss_dssp             HHHHHHHHHHHTCCEEEEECCCHHHHTCCHHHHHHHHH-HHHTE----EEEEEETTCCBTTTTBCSTTHHHHCSS---E-
T ss_pred             HHHHHHHHHHcCCCEEEEecCCHHHHcCCHHHHHHHHH-HHcCC----CEEEECcCCCCCCcCCCHHHHHHhCCC---C-
Confidence            445566677777777765        356788888766 67777    888999887644  3445555554321   1 


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccccccceee
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK  245 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~~  245 (313)
                                            +..++... .+....||+.|++.|.+|+++.          |+.+|||||.++|+|+|
T Consensus       152 ----------------------V~~v~~~~-~~~~~ISST~IR~~L~~G~v~~----------A~~lLGrpy~i~G~Vv~  198 (308)
T 3op1_A          152 ----------------------VIIVPPVE-DEKGKISSTRIRQAILDGNVKE----------AGKLLGAPLPSRGMVVH  198 (308)
T ss_dssp             ----------------------EEEECCCB-CSSCBCCHHHHHHHHHHTCHHH----------HHHHHSSCCEEEEEEEB
T ss_pred             ----------------------EEEeCCEe-cCCceEeHHHHHHHHHcCCHHH----------HHhhcCcceeEEEEEEE
Confidence                                  34555532 2334568889999999999999          99999999999999999


Q ss_pred             eecCCCcccCccccccCCCccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          246 GLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       246 g~~~g~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      |+++||+ ||||||||.+++. +++|  +.||||+|+.+ ++.+|+||+|||+||||++.++++|+||
T Consensus       199 G~~~Gr~-lGfPTANl~~~~~-~~~P--~~GVYa~~v~~-~~~~~~gv~niG~~PT~~~~~~~vE~hi  261 (308)
T 3op1_A          199 GNARGRT-IGYPTANLVLLDR-TYMP--ADGVYVVDVEI-QRQKYRAMASVGKNVTFDGEEARFEVNI  261 (308)
T ss_dssp             CC-------CCCCEEEEECSS-BCCC--CSEEEEEEEEE-TTEEEEEEEEECBTTTBC--CCEEEEEE
T ss_pred             CCccCcc-cCCCcEeecCccc-ccCC--CCceEEEEEEE-CCEEEEEEEEeccCCccCCCceEEEEEE
Confidence            9999999 9999999998765 7899  79999999998 7789999999999999987778999996

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.98  E-value=2.7e-31  Score=224.17  Aligned_cols=189  Identities=23%  Similarity=0.333  Sum_probs=158.2

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCC--HHHHH---HHH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KHEFV---NEV   79 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~---~~~   79 (313)
                      |+|++|+|+||+||||+|+...+..++.++++++|.+++.+......|....+.+..++...+...+  .....   ...
T Consensus         1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (243)
T 4g9b_A            1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRK   80 (243)
T ss_dssp             -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHH
T ss_pred             CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999988888888899988888888888776422  22211   111


Q ss_pred             HHHHHhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHH
Q 021360           80 YSMFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        80 ~~~~~~~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~  156 (313)
                      ...+....   ....++||+.++++.|++.|++++++|++..  ....+ +++|+..+|+.++++++++.+||+|+.|..
T Consensus        81 ~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~  157 (243)
T 4g9b_A           81 NLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTIL-AALELREFFTFCADASQLKNSKPDPEIFLA  157 (243)
T ss_dssp             HHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHH
T ss_pred             HHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhh-hhhhhccccccccccccccCCCCcHHHHHH
Confidence            12222222   2346899999999999999999999998765  34456 889999999999999999999999999999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      +++++|++|++|++|||+.+|+.+|+++|+++++|..+..
T Consensus       158 a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             HHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC
T ss_pred             HHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            9999999999999999999999999999999999998644

>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}

Probab=99.98  E-value=1.2e-33  Score=245.81  Aligned_cols=176  Identities=22%  Similarity=0.320  Sum_probs=135.2

Q ss_pred             hHHHHHHHHHHCCCCEEEE--------eCCchHHHHHHHHhhcCCccccceEEecCCCCC---CCCChHHHHHHHHHcCC
Q 021360           95 GANRLIKHLSCHGVPMALA--------SNSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~--------s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~---~kp~~~~~~~~~~~~~~  163 (313)
                      ...+-++.|++.|+..+++        +.++.+|++.++.+.+++    +.+++|+|+..   +.++.+.+++..++ |+
T Consensus        73 ~~~eR~~ll~~~gVD~v~v~~F~~~~a~ls~e~Fi~~il~~~l~~----~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~  147 (338)
T 2x0k_A           73 TLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEFLLEDTLHA----SHVVVGANFTFGENAAGTADSLRQICQS-RL  147 (338)
T ss_dssp             CHHHHHHHHHHTTCSEEEEECTTTSSSSCCHHHHHHHCCCCCTCE----EEEEEETTCEESGGGCEEHHHHHHHTTT-TS
T ss_pred             CHHHHHHHHHhcCCCEEEEccccHHHHhCCHHHHHHHHHHhhcCC----CEEEEeecCCCCCCCCCCHHHHHHHhcC-Ce
Confidence            3455566677777776654        345566666544355666    77788877753   34456666665555 55


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccccccce
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPV  243 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v  243 (313)
                      +                       ++.++... .+....||+.+++.|.+|+++.          |+.+|||||.++|+|
T Consensus       148 ~-----------------------V~~v~~~~-~~~~~ISST~IR~~L~~G~i~~----------a~~lLGrpy~i~G~V  193 (338)
T 2x0k_A          148 T-----------------------VDVIDLLD-DEGVRISSTTVREFLSEGDVAR----------ANWALGRHFYVTGPV  193 (338)
T ss_dssp             E-----------------------EEEECCCE-ETTEECSHHHHHHHHHTTCHHH----------HHHHHTSCCEEEEEC
T ss_pred             E-----------------------EEEECcEe-cCCcccccchHHHHHhcCcHHH----------HHHhcceeeEEEEEE
Confidence            4                       77776643 2334568888888999999999          999999999999999


Q ss_pred             eeeecCC-CcccCccccccCCCccccccCCCCCeEEEEEEEecC-----------CceeEEEEEecCCccccCCcceEee
Q 021360          244 VKGLGRG-SKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLST-----------RGVYKMVMSIGWNPYFDNAEKTIVS  311 (313)
Q Consensus       244 ~~g~~~g-~~~lg~ptan~~~~~~~~~~p~~~~gvy~~~~~~~~-----------~~~~~~~~~~g~~p~~~~~~~~~e~  311 (313)
                      +||+++| |+ ||||||||.+++. +++|  +.||||+|+.+..           +.+|+||+|||+||||++..++||+
T Consensus       194 v~G~~~Gsr~-lGfPTANl~~~~~-~~~P--~~GVYa~~v~~~~~~~~~~~~~~~~~~~~gv~niG~~PT~~~~~~~vE~  269 (338)
T 2x0k_A          194 VRGAGRGGKE-LGFPTANQYFHDT-VALP--ADGVYAGWLTILPTEAPVSGNMEPEVAYAAAISVGTNPTFGDEQRSVES  269 (338)
T ss_dssp             BCCSSCSSSC-TTSCSEEEEECTT-BCCC--CSEEEEEEEEECSCCSCCEESCCTTCEEEEEEEEEEETTTCTTEEEEEE
T ss_pred             ecCcccccce-ecccccccCCccc-ccCC--CCeEEEEEEEECccccccccccCCCCEEEEEEEEcCCCccCCCcceEEE
Confidence            9999999 88 9999999988765 7889  7999999999831           7789999999999999876778999


Q ss_pred             cC
Q 021360          312 LT  313 (313)
Q Consensus       312 ~~  313 (313)
                      ||
T Consensus       270 hi  271 (338)
T 2x0k_A          270 FV  271 (338)
T ss_dssp             EE
T ss_pred             Ee
Confidence            96

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.97  E-value=3.7e-30  Score=213.03  Aligned_cols=187  Identities=28%  Similarity=0.454  Sum_probs=167.7

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-   87 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   87 (313)
                      ||+|+||+||||+|+...+..++.++++++|.+.+.+......|....................+.+...+.+.+.... 
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFS   80 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999998888898998888888888888887777777666666555443 


Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ....++||+.++++.|++.|++++++||++...+...+ +.+++..+|+.++++++++..||+|+.|+.+++++|++|++
T Consensus        81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e  159 (216)
T 3kbb_A           81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK  159 (216)
T ss_dssp             HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred             HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence            45788999999999999999999999999999988888 88999999999999999999999999999999999999999


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEE-eCCCCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVA-VPSLPK  196 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~-v~~~~~  196 (313)
                      |+||||+.+|+.+|+++|+++++ +..+..
T Consensus       160 ~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~  189 (216)
T 3kbb_A          160 VVVFEDSKSGVEAAKSAGIERIYGVVHSLN  189 (216)
T ss_dssp             EEEEECSHHHHHHHHHTTCCCEEEECCSSS
T ss_pred             eEEEecCHHHHHHHHHcCCcEEEEecCCCC
Confidence            99999999999999999999885 655443

>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A

Probab=99.97  E-value=8.5e-32  Score=229.54  Aligned_cols=118  Identities=24%  Similarity=0.233  Sum_probs=83.2

Q ss_pred             HHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCCccccccceeeeecCCCcccCccccc
Q 021360          181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTAN  260 (313)
Q Consensus       181 a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~p~~~~g~v~~g~~~g~~~lg~ptan  260 (313)
                      .++.|+.++.++... ......||+.+++.+.+++++.          |+.+|||||.++|+|+||+++||+ |||||||
T Consensus       115 L~~~G~~V~~v~~~~-~~~~~iSST~IR~~L~~G~i~~----------a~~lLGr~y~i~G~Vv~G~~~Gr~-lGfPTaN  182 (293)
T 1mrz_A          115 LRKKGVEVYEIEDVV-VQGKRVSSSLIRNLVQEGRVEE----------IPAYLGRYFEIEGIVHKDREFGRK-LGFPTAN  182 (293)
T ss_dssp             HHHTTCEEEEECCCE-ETTEECCHHHHHHHHHTTCTTT----------THHHHSSCCEEEEEC------------CCCEE
T ss_pred             HHhCCCEEEEECCEE-eCCccccHhHHHHHHhcCcHHH----------HhhhcCCCeEEEEEEccCccccce-ecccceE
Confidence            333566687777633 2233457888888999999998          999999999999999999999999 9999999


Q ss_pred             cCCC-ccccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCC-cceEeecC
Q 021360          261 LSTE-GYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNA-EKTIVSLT  313 (313)
Q Consensus       261 ~~~~-~~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~-~~~~e~~~  313 (313)
                      |.++ +. +++|  +.||||+|+.+.++..|+||+|||+||||++. ..++|+||
T Consensus       183 l~~~~~~-~~~P--~~GVYa~~v~~~~~~~~~gv~niG~~PT~~~~~~~~iE~hi  234 (293)
T 1mrz_A          183 IDRGNEK-LVDL--KRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYI  234 (293)
T ss_dssp             CBCCSSC-BCCC--CSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEE
T ss_pred             eccCccC-cCCC--CCeEEEEEEEEecCcEEEEEEEeccCcccCCCccceEEEEe
Confidence            9886 44 7899  79999999986356789999999999999775 47899996

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.97  E-value=4e-29  Score=211.81  Aligned_cols=203  Identities=24%  Similarity=0.368  Sum_probs=166.0

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCC--HHH---HHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--KHE---FVNEVYS   81 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~   81 (313)
                      .|+|+|+||+||||+|+...+..++.++++++|.+++......+.|....+....+.........  ...   +......
T Consensus        24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (250)
T 4gib_A           24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN  103 (250)
T ss_dssp             CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred             chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999888877788888888777777776654432  211   2222333


Q ss_pred             HHHhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHH
Q 021360           82 MFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        82 ~~~~~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      .+....   ....++|++.++++.|++.|+++++.|++..  ....+ +++|+.++|+.++++++++..||+|+.|..++
T Consensus       104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~  180 (250)
T 4gib_A          104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMSA  180 (250)
T ss_dssp             HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHHH
T ss_pred             HHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHh-hhcccccccceeecccccCCCCCcHHHHHHHH
Confidence            333332   3456899999999999999999988776643  44566 88999999999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      +++|++|++|++|||+.+|+.+|+++|+.++++....    ....++.+++++.++..
T Consensus       181 ~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~----~~~~ad~vi~~l~eL~~  234 (250)
T 4gib_A          181 KGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE----NLKKANLVVDSTNQLKF  234 (250)
T ss_dssp             HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT----TTTTSSEEESSGGGCCH
T ss_pred             HHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh----HhccCCEEECChHhCCH
Confidence            9999999999999999999999999999999996532    22358999999998753

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.97  E-value=3.5e-29  Score=205.80  Aligned_cols=207  Identities=26%  Similarity=0.382  Sum_probs=178.4

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      +|+|+|+||+||||+++...+..++.++++++|...+........+.........+....+.......+...+.+.+...
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNN   82 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHS
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999998877777788888877777788777776666666666666665554


Q ss_pred             hc--cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        87 ~~--~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      ..  ...++|++.++|+.+++.|++++++|+++...++..+ +.+++..+|+.++++++....||+++.++.+++++|++
T Consensus        83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~  161 (214)
T 3e58_A           83 PLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQ  161 (214)
T ss_dssp             CCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCC
T ss_pred             hcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCC
Confidence            32  3478999999999999999999999999999888888 88999999999999999999999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      +++|++|||+.+|+.+|+.+|+.++++..+..... ...++.+++++.++.
T Consensus       162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~-~~~a~~~~~~~~el~  211 (214)
T 3e58_A          162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMD-QSAAKGLLDSLTDVL  211 (214)
T ss_dssp             GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCC-CTTSSEEESSGGGGG
T ss_pred             hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccch-hccHHHHHHHHHHHH
Confidence            99999999999999999999999999987433222 247899999998863

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.97  E-value=5.5e-29  Score=205.32  Aligned_cols=199  Identities=16%  Similarity=0.252  Sum_probs=157.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS   84 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~   84 (313)
                      |++|+|+||+||||+|+...+..++.++++++|.... ........|......+.    .. .+. ..+++.+.+.+.+.
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~   76 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFA----TC-LSKDQISEAVQIYRSYYK   76 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHH----TT-SCGGGHHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHH----HH-cCHHHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999997763 45555666765543332    22 221 22344444444444


Q ss_pred             hh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      .. .....++||+.++|+.|++ |++++++||++...++..+ +++|+..+|+.+++++  ...||+|+.|+.+++++|+
T Consensus        77 ~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~  152 (210)
T 2ah5_A           77 AKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQL  152 (210)
T ss_dssp             HTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTC
T ss_pred             HhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCC
Confidence            32 2346789999999999999 9999999999998888888 7889999999999887  7799999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +|++|++|||+.+|+.+|+++|++++++.++......  ...++.+++++.++
T Consensus       153 ~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el  205 (210)
T 2ah5_A          153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             CcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            9999999999999999999999999999875432221  12578888888765

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.96  E-value=8.5e-29  Score=207.44  Aligned_cols=209  Identities=27%  Similarity=0.321  Sum_probs=173.9

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      .+++|+|+||+||||+++...+..++.++++++|...+...+....+......+..++...........+...+.+.+..
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGA   95 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999997777777788888888777766654433222233444444444544


Q ss_pred             hh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           86 HL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        86 ~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      ..   ....++|++.++|+.|++.|++++++|+++...++..+ +.+++..+|+.+++++++..+||+++.++.+++++|
T Consensus        96 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg  174 (237)
T 4ex6_A           96 HVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLG  174 (237)
T ss_dssp             HHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHT
T ss_pred             hcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcC
Confidence            43   56789999999999999999999999999999888888 888999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-cccc-cccceeeccccccC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRY-TAADEVINSLLDLR  215 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~-~~s~~ii~~l~e~~  215 (313)
                      ++|++|++|||+.+|+.+|+.+|+.++++.++... .... ..++.++.++.++.
T Consensus       175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~  229 (237)
T 4ex6_A          175 IPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAV  229 (237)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHH
T ss_pred             CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHH
Confidence            99999999999999999999999999999986433 2222 36899999998764

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.96  E-value=2.5e-28  Score=203.74  Aligned_cols=209  Identities=22%  Similarity=0.239  Sum_probs=174.6

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH---HHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   83 (313)
                      +++|+|+||+||||+++...+..++.++++++|...+........+......+..++...+...+......   .+.+.+
T Consensus         4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (233)
T 3s6j_A            4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAY   83 (233)
T ss_dssp             -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHHH
T ss_pred             CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999888888888888888888888888877665544432   233333


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ........++|++.++|+.+++.|++++++|+++...+...+ +.+++..+|+.++++++...+||+++.++.+++++|+
T Consensus        84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~  162 (233)
T 3s6j_A           84 ERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGA  162 (233)
T ss_dssp             HHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTC
T ss_pred             HHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCC
Confidence            334456889999999999999999999999999999888888 8899999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccCc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRP  216 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~~  216 (313)
                      ++++|++|||+.+|+.+|+.+|+.++++.++......  ...++.+++++.++..
T Consensus       163 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~  217 (233)
T 3s6j_A          163 PIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLN  217 (233)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHH
T ss_pred             CHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHH
Confidence            9999999999999999999999999999875332222  2248999999988643

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.96  E-value=4.7e-28  Score=203.93  Aligned_cols=208  Identities=24%  Similarity=0.374  Sum_probs=171.5

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   83 (313)
                      +++++|+|+||+||||+++...+..++.++++++|............+......+..++.. ++...+.+.+....... 
T Consensus        20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   98 (243)
T 3qxg_A           20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEK-   98 (243)
T ss_dssp             --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHH-
T ss_pred             ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH-
Confidence            4567899999999999999999999999999999999887777777787777776666544 67666655544333222 


Q ss_pred             Hhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc--ceEEecCCCCCCCCChHHHHHHH
Q 021360           84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        84 ~~~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f--~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      ...+   ....++|++.++|+.|++.|++++++|+++...+...+ +. ++..+|  +.+++++++..+||+++.++.++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~  176 (243)
T 3qxg_A           99 SILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMAL  176 (243)
T ss_dssp             HHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHH
T ss_pred             HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHH
Confidence            2222   35788999999999999999999999999988887777 66 999999  99999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccC
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  215 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~  215 (313)
                      +++|++|++|++|||+.+|+.+|+.+|+.++++..+......  ...++.+++++.++.
T Consensus       177 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~  235 (243)
T 3qxg_A          177 KKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLC  235 (243)
T ss_dssp             HHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHH
T ss_pred             HHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHH
Confidence            999999999999999999999999999999999885443322  235899999998764

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.96  E-value=2.9e-28  Score=202.74  Aligned_cols=202  Identities=22%  Similarity=0.295  Sum_probs=166.6

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++|+|+||+||||+|+...+..++.++++++|.. .+.+.+....|......+..++.    ....+++...+.+.+...
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   77 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK----DKFREEYVEVFRKHYLEN   77 (222)
T ss_dssp             EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG----GGCCTHHHHHHHHHHHHC
T ss_pred             CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC----hHHHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999876 45556666777777666665543    122234445555555443


Q ss_pred             -hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        87 -~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                       .....++||+.++|+.|++.|++++++|+++...++..+ +.+++..+|+.+++++++...||+|+.+..+++++|++|
T Consensus        78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~  156 (222)
T 2nyv_A           78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP  156 (222)
T ss_dssp             SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred             ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence             246788999999999999999999999999998888888 888999999999999999999999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      ++|++|||+.+|+.+|+.+|+.++.+.++...... ..++.+++++.++.
T Consensus       157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~  205 (222)
T 2nyv_A          157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLV  205 (222)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHH
T ss_pred             hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHH
Confidence            99999999999999999999999999875433222 46888888888753

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.96  E-value=1.3e-28  Score=207.13  Aligned_cols=205  Identities=21%  Similarity=0.291  Sum_probs=162.9

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCC--CChhhhhhhcCCCHHHHHHHHHHHh------------------C
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDY------------------G   67 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~g~~~~~~~~~~~~~~------------------~   67 (313)
                      |+|+|+||+||||+|+...+..++.++++++|..  .+........|......+..+....                  +
T Consensus         3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP   82 (240)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred             cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence            5799999999999999999999999999999986  5666777788877666665554211                  1


Q ss_pred             CCCCHHH---HHHHHHHHHHhh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC
Q 021360           68 LPCAKHE---FVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE  143 (313)
Q Consensus        68 ~~~~~~~---~~~~~~~~~~~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~  143 (313)
                      ...+.+.   +...+.+.+... .....++||+.++|+.|++.|++++++||++...+...+ +++++. +|+.++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~  160 (240)
T 2hi0_A           83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKS  160 (240)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCC
Confidence            1112222   223333333332 235678999999999999999999999999988888778 778988 9999999999


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc-c-ccccceeecccccc
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-R-YTAADEVINSLLDL  214 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~-~~~s~~ii~~l~e~  214 (313)
                      +..+||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++..... . ...++.++.++.++
T Consensus       161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el  233 (240)
T 2hi0_A          161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKL  233 (240)
T ss_dssp             TSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHH
Confidence            99999999999999999999999999999999999999999999999987543211 1 12578888888764

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.96  E-value=1.5e-27  Score=200.91  Aligned_cols=207  Identities=23%  Similarity=0.391  Sum_probs=169.4

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   84 (313)
                      ++++|+|+||+||||+++...+..++.++++++|............|......+..++.. ++...+.+.+...... +.
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   98 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQA-KT   98 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-HH
T ss_pred             CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHH-HH
Confidence            356899999999999999999999999999999999887777777787777766666544 6766665555433322 22


Q ss_pred             hhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc--ceEEecCCCCCCCCChHHHHHHHH
Q 021360           85 DHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        85 ~~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f--~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ..+   ....++|++.++|+.+++.|++++++|+++...+...+ +. ++..+|  +.+++++++..+||+++.++.+++
T Consensus        99 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~  176 (247)
T 3dv9_A           99 EEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALK  176 (247)
T ss_dssp             HHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHH
T ss_pred             HHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHH
Confidence            222   34788999999999999999999999999988887778 66 999999  999999999999999999999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccC
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  215 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~  215 (313)
                      ++|++|++|++|||+.+|+.+|+.+|+.++++.++......  ...++.+++++.++.
T Consensus       177 ~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~  234 (247)
T 3dv9_A          177 KGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN  234 (247)
T ss_dssp             HHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHH
T ss_pred             HcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHH
Confidence            99999999999999999999999999999999886543322  236899999998764

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.96  E-value=4.6e-28  Score=202.42  Aligned_cols=203  Identities=28%  Similarity=0.355  Sum_probs=159.1

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCC--CCCHHHH---HHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL--PCAKHEF---VNEVYSM   82 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~   82 (313)
                      ++|+|+||+||||+++...+..++.++++++|...+........|.........++..++.  ..+....   ...+.+.
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRD   80 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999888888888899988888899888877  4444333   2333333


Q ss_pred             HHhhhcc---CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           83 FSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        83 ~~~~~~~---~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      +......   ..++|++.++|+.|++.|++++++|+++.  +...+ +.+++..+|+.+++++++..+||+++.++.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~  157 (233)
T 3nas_A           81 YQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA  157 (233)
T ss_dssp             HHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred             HHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence            4433322   34899999999999999999999999865  56666 889999999999999999999999999999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCcc
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  217 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~  217 (313)
                      ++|++|++|++|||+.+|+.+|+.+|+.+++++..   .... .++.++.++.++...
T Consensus       158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~---~~~~-~ad~v~~s~~el~~~  211 (233)
T 3nas_A          158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG---QPML-GADLVVRQTSDLTLE  211 (233)
T ss_dssp             HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCCHH
T ss_pred             HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc---cccc-cCCEEeCChHhCCHH
Confidence            99999999999999999999999999999999763   2222 789999999987643

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.96  E-value=1.4e-27  Score=203.02  Aligned_cols=208  Identities=28%  Similarity=0.399  Sum_probs=175.9

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhh-hhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      +++|+|+||+||||+|+...+..++.++++++|....... ...+.|......+..+...++....... ...+.+.+..
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  104 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDF-LDVLETRFNA  104 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTH-HHHHHHHHHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHH-HHHHHHHHHH
Confidence            4689999999999999999999999999999998877654 4566788888888888888887655333 3334444444


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce-EEecCCCC-CCCCChHHHHHHHHHcCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~-v~~~~~~~-~~kp~~~~~~~~~~~~~~  163 (313)
                      .+....++|++.++|+.|++.|++++++|+++...++..+ +.+++..+|+. +++++++. .+||+++.++.+++++|+
T Consensus       105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi  183 (259)
T 4eek_A          105 AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGI  183 (259)
T ss_dssp             HHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTC
T ss_pred             HhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHcCC
Confidence            4467889999999999999999999999999998888888 88999999999 99999999 999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc----c-c-cccccceeeccccccCc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----T-H-RYTAADEVINSLLDLRP  216 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~----~-~-~~~~s~~ii~~l~e~~~  216 (313)
                      ++++|++|||+.+|+.+|+.+|+.++++.++...    . . ....++.+++++.++..
T Consensus       184 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~  242 (259)
T 4eek_A          184 LPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRA  242 (259)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHH
T ss_pred             CHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHH
Confidence            9999999999999999999999999999875332    1 1 12358999999988643

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.96  E-value=2.8e-27  Score=197.97  Aligned_cols=207  Identities=18%  Similarity=0.219  Sum_probs=166.1

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhc------------CC-C----HHHHHHHHHHHhC
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GK-T----PLEEAAIIVEDYG   67 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------g~-~----~~~~~~~~~~~~~   67 (313)
                      |++++|+|+||+||||+++...+..++.++++++|..........+.            +. .    ....+..++..++
T Consensus         3 ~mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (238)
T 3ed5_A            3 AMKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYG   82 (238)
T ss_dssp             -CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTT
T ss_pred             ccccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999887654332211            11 1    1123455666777


Q ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC
Q 021360           68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG  147 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~  147 (313)
                      .+.+...+...+.+.+.   ....++|++.++|+.+++. ++++++|+++...+...+ +.+++..+|+.++++++++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~  157 (238)
T 3ed5_A           83 YEADGALLEQKYRRFLE---EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQ  157 (238)
T ss_dssp             CCCCHHHHHHHHHHHHT---TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSC
T ss_pred             CCCcHHHHHHHHHHHHH---hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCC
Confidence            76555444333332221   3578999999999999999 999999999998888888 788999999999999999999


Q ss_pred             CCChHHHHHHHHHcC-CCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCc
Q 021360          148 KPSPDIFLEAAKRLN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP  216 (313)
Q Consensus       148 kp~~~~~~~~~~~~~-~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~  216 (313)
                      ||+++.++.+++++| ++|++|++|||+. +|+.+|+.+|+.++++.++.........++.+++++.++..
T Consensus       158 kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~  228 (238)
T 3ed5_A          158 KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYH  228 (238)
T ss_dssp             TTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHH
T ss_pred             CCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHH
Confidence            999999999999999 9999999999998 99999999999999998865444445578999999988643

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.96  E-value=1.9e-27  Score=197.61  Aligned_cols=206  Identities=19%  Similarity=0.209  Sum_probs=165.9

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCA-KHEFVNEVYSMFS   84 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   84 (313)
                      +|+|+|+||+||||+++...+...+.++++++|... ....+....|......+...+   +++.. .......+.+.+.
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   78 (226)
T 3mc1_A            2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFDEETATVAIDYYRDYFK   78 (226)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCCHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCCHHHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999875 445666777877666554443   44311 1112222222222


Q ss_pred             h-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 D-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~-~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      . ......++|++.++|+.|++.|++++++|++....+...+ +.+++..+|+.+++++++..+||+++.++.+++++|+
T Consensus        79 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi  157 (226)
T 3mc1_A           79 AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNI  157 (226)
T ss_dssp             TTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTC
T ss_pred             HhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCc
Confidence            2 1234789999999999999999999999999998888888 8899999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccCc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRP  216 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~~  216 (313)
                      +|++|++|||+.+|+.+|+.+|+.++++.++......  ...++.+++++.++..
T Consensus       158 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~  212 (226)
T 3mc1_A          158 KSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHK  212 (226)
T ss_dssp             CGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHH
T ss_pred             CcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHH
Confidence            9999999999999999999999999999976543332  3578999999988643

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.96  E-value=2.4e-27  Score=194.99  Aligned_cols=200  Identities=21%  Similarity=0.337  Sum_probs=161.7

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh--
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD--   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   85 (313)
                      ++|+|+||+||||+|+...+...+.++++++|...+........|....+..    +.++.+.  ..+.....+.+..  
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~   76 (209)
T 2hdo_A            3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAM----TELGIAA--SEFDHFQAQYEDVMA   76 (209)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHH----HHTTCCG--GGHHHHHHHHHHHHT
T ss_pred             cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHH----HHcCCCH--HHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999988877777777777655443    3345432  2222222222222  


Q ss_pred             -hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           86 -HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        86 -~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                       ......++|++.++|+.+++. ++++++|+++...++..+ +.+++..+|+.++++++++..||+++.++.+++++|++
T Consensus        77 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~  154 (209)
T 2hdo_A           77 SHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA  154 (209)
T ss_dssp             TCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred             hhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence             224578899999999999999 999999999998888888 88899999999999999999999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      +++|++|||+.+|+.+|+.+|+.+++++++.........++.++.++.++.
T Consensus       155 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~  205 (209)
T 2hdo_A          155 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDIL  205 (209)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred             cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHH
Confidence            999999999999999999999999999864432222222888888887763

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.96  E-value=2.9e-27  Score=198.02  Aligned_cols=207  Identities=20%  Similarity=0.206  Sum_probs=165.7

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCC---Chhhhhhhc-------------CC-CHH----HHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---DGREKHKIV-------------GK-TPL----EEAAIIVED   65 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~-------------g~-~~~----~~~~~~~~~   65 (313)
                      |++|+|+||+||||+++...+..++.++++++|...   +........             +. ...    ..+..++..
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA   82 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999998765   443332111             11 111    234566667


Q ss_pred             hCCCCCHHHHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           66 YGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      .+.+  .......+.+.+.... ....++|++.++|+.++ .|++++++||++...+...+ +.+++..+|+.++++++.
T Consensus        83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~  158 (240)
T 3qnm_A           83 VGVE--DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDL  158 (240)
T ss_dssp             TTCC--CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGT
T ss_pred             cCCC--cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEeccC
Confidence            7765  3344444444444433 56789999999999999 89999999999998888777 788999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK  218 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~  218 (313)
                      +.+||+++.++.+++++|++|++|++|||+. +|+.+|+.+|+.+++++++.. ......++.+++++.|+....
T Consensus       159 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~~  232 (240)
T 3qnm_A          159 GVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNLL  232 (240)
T ss_dssp             TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHHH
Confidence            9999999999999999999999999999996 999999999999999998654 233457999999999875443

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.95  E-value=2.6e-27  Score=198.98  Aligned_cols=203  Identities=15%  Similarity=0.210  Sum_probs=166.2

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   86 (313)
                      |+|+|+||+||||+++...+..++.++++++|...+...+....+......+...   ++++. ........+.+.+...
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  104 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADK  104 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHT
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHh
Confidence            6799999999999999999999999999999988777777777787766554333   23331 1122223333333332


Q ss_pred             -hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC-
Q 021360           87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME-  164 (313)
Q Consensus        87 -~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-  164 (313)
                       .....++|++.++|+.|++.|++++++|+++...++..+ +.+++..+|+.++++++...+||+++.++.+++++|++ 
T Consensus       105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~  183 (240)
T 3sd7_A          105 GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKD  183 (240)
T ss_dssp             GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred             cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence             235789999999999999999999999999999888888 88999999999999999999999999999999999999 


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      +++|++|||+.+|+.+|+.+|+.++++.++......  ...++.++.++.++
T Consensus       184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el  235 (240)
T 3sd7_A          184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESI  235 (240)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred             CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence            999999999999999999999999999975543332  25689999998876

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.95  E-value=5e-27  Score=201.03  Aligned_cols=210  Identities=18%  Similarity=0.244  Sum_probs=166.2

Q ss_pred             cccCccEEEEecCCccccChHHH-HHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHH----------HHHHHhCCCCCHH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMF-SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA----------IIVEDYGLPCAKH   73 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~   73 (313)
                      +++++|+|+||+||||+++.... ...+.++++++|...+........+......+.          .+...++...+..
T Consensus        10 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (277)
T 3iru_A           10 CAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEE   89 (277)
T ss_dssp             CCCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHH
T ss_pred             hhccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHH
Confidence            34568999999999999987655 688889999999988777777777765544333          3334556555544


Q ss_pred             HHHH---HHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccc-cceEEecCCCCCCC
Q 021360           74 EFVN---EVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRTGK  148 (313)
Q Consensus        74 ~~~~---~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~-f~~v~~~~~~~~~k  148 (313)
                      ....   .+.+.+.... ....++|++.++|+.|++.|++++++||.+...+...+ +.+++..+ |+.+++++++..+|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~k  168 (277)
T 3iru_A           90 DIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVRGR  168 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSSCT
T ss_pred             HHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCCCC
Confidence            4332   2222222222 35789999999999999999999999999998888777 77888888 89999999999999


Q ss_pred             CChHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc------------------------ccc-cc
Q 021360          149 PSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YT  202 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~-~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~-~~  202 (313)
                      |++..++.+++++|+++ ++|++|||+.+|+.+|+.+|+.+++|.++...                        ... ..
T Consensus       169 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  248 (277)
T 3iru_A          169 PFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNA  248 (277)
T ss_dssp             TSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhC
Confidence            99999999999999999 99999999999999999999999999986431                        111 23


Q ss_pred             ccceeeccccccC
Q 021360          203 AADEVINSLLDLR  215 (313)
Q Consensus       203 ~s~~ii~~l~e~~  215 (313)
                      .++.+++++.++.
T Consensus       249 ~ad~v~~~~~el~  261 (277)
T 3iru_A          249 GAHYVIDSVADLE  261 (277)
T ss_dssp             TCSEEESSGGGTH
T ss_pred             CCCEEecCHHHHH
Confidence            5899999998864

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.95  E-value=5.2e-26  Score=191.69  Aligned_cols=209  Identities=17%  Similarity=0.219  Sum_probs=165.8

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHh----CCCCCHHHH---HH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDY----GLPCAKHEF---VN   77 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~---~~   77 (313)
                      ..++|+|+||+||||+|+...+..++.++++++|... +...+..+.+......+...+...    +...+...+   ..
T Consensus        20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (243)
T 2hsz_A           20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR   99 (243)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHH
Confidence            4578999999999999999999999999999999864 455566677776666555554432    333333322   22


Q ss_pred             HHHHHHHhh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHH
Q 021360           78 EVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        78 ~~~~~~~~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~  156 (313)
                      .+.+.+... .....++|++.++|+.|++.|++++++|+++...++..+ +.+|+..+|+.+++++++...||+++.+..
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~  178 (243)
T 2hsz_A          100 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY  178 (243)
T ss_dssp             HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred             HHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHH
Confidence            333333332 245688999999999999999999999999998888888 888999999999999999899999999999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc--cccccccceeeccccccC
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDLR  215 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~--~~~~~~s~~ii~~l~e~~  215 (313)
                      +++++|+++++|++|||+.+|+.+|+.+|+.++++..+...  ......++.++.++.++.
T Consensus       179 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~  239 (243)
T 2hsz_A          179 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADIL  239 (243)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGG
T ss_pred             HHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHH
Confidence            99999999999999999999999999999999999875432  112346888888888763

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.95  E-value=4.4e-26  Score=188.91  Aligned_cols=208  Identities=23%  Similarity=0.364  Sum_probs=169.3

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD   85 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   85 (313)
                      ++|+|+||+||||+++...+...+.++++++|.... ........|.........+....++. .....+...+...+..
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS   87 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence            589999999999999999888899999999987765 34444566777777677777666553 2344444444444433


Q ss_pred             hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        86 ~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      .+ ....++|++.++++.+++.|++++++|+.+...++..+ +.+++..+|+.++++++....||++..++.+++++|++
T Consensus        88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~  166 (226)
T 1te2_A           88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD  166 (226)
T ss_dssp             HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred             HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC
Confidence            32 45788999999999999999999999999988888777 78899999999999999999999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-cccccccceeeccccccCc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRP  216 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~s~~ii~~l~e~~~  216 (313)
                      +++|++|||+.+|+.+++.+|+.++++.++... ......++.++.++.++..
T Consensus       167 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~  219 (226)
T 1te2_A          167 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA  219 (226)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred             HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence            999999999999999999999999999885432 2234568899999888643

>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}

Probab=99.95  E-value=3.7e-29  Score=195.39  Aligned_cols=86  Identities=33%  Similarity=0.543  Sum_probs=60.8

Q ss_pred             cccccCCCCCCccccccceeeeecCCCcccCccccccCCC----ccccccCCCCCeEEEEEEEecC--------CceeEE
Q 021360          225 QDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTE----GYSDVLSEHPSGVYFGWAGLST--------RGVYKM  292 (313)
Q Consensus       225 ~~~~a~~~lg~p~~~~g~v~~g~~~g~~~lg~ptan~~~~----~~~~~~p~~~~gvy~~~~~~~~--------~~~~~~  292 (313)
                      ++.+...+||+||.++|+|+||++|||+.||||||||.+.    .. .+.|  +.||||+|+.+.+        +.+|+|
T Consensus         6 ~~~~~~~lLGrpy~i~G~Vv~G~~rGrr~LGfPTANl~l~~~~~~~-~~~p--~~GVYa~~v~~~~~~~~~~~~~~~~~g   82 (181)
T 3bnw_A            6 HHHMRQTGSFQPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMEC-LQPY--KNLVVYGWGTVSQVPGKERESFGPYPF   82 (181)
T ss_dssp             --CCCCCTTSCCEEEEEEEEC------CCSCCCCCEECCCHHHHHH-HGGG--TTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             hhHHHHHhCCCCeEEEEEEEeCCccCccccCCcccccccccccccc-ccCC--CCEEEEEEEEECCcccccccCCceeEE
Confidence            4556889999999999999999999955599999999842    32 3447  7999999999833        268999


Q ss_pred             EEEecCCccccCCcceEeecC
Q 021360          293 VMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       293 ~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      |+|||+||||++..++||+||
T Consensus        83 v~nIG~nPTf~~~~~~vEvhi  103 (181)
T 3bnw_A           83 AASIGFNMQFDEKTLTVEPYF  103 (181)
T ss_dssp             EEEEECC------CCEEEEEE
T ss_pred             EEEecCCCeECCCeeEEEEEE
Confidence            999999999987778999996

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.95  E-value=2.4e-26  Score=190.13  Aligned_cols=203  Identities=23%  Similarity=0.312  Sum_probs=164.7

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMF   83 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~   83 (313)
                      |+|+|+||+||||+|+.+.+...+.++++++|.. .+........|.........++...+...+....   ...+.+.+
T Consensus         1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T 2wf7_A            1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY   80 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHH
Confidence            3789999999999999998989999999999987 6666666777888777777788877755444432   22233333


Q ss_pred             Hhhhc---cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           84 SDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        84 ~~~~~---~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      .....   ...++|++.++++.+++.|++++++|++  ......+ +.+++..+|+.++++++++..||+|+.++.++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~  157 (221)
T 2wf7_A           81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA  157 (221)
T ss_dssp             HHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHH
T ss_pred             HHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHH
Confidence            33322   3578899999999999999999999988  3455566 7789999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCcc
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  217 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~  217 (313)
                      +|++|++|++|||+.+|+.||+.+|+.+++++.   ..... .++.++.++.++.+.
T Consensus       158 lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~~~~~-~a~~v~~~~~el~~~  210 (221)
T 2wf7_A          158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLG-DDIVIVPDTSHYTLE  210 (221)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHC-SSSEEESSGGGCCHH
T ss_pred             cCCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---HHHhc-cccchhcCHHhCCHH
Confidence            999999999999999999999999999999965   22233 688999998886543

>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*

Probab=99.95  E-value=1.8e-28  Score=188.74  Aligned_cols=80  Identities=45%  Similarity=0.751  Sum_probs=69.9

Q ss_pred             CCCCCccccccceeeeecCCCcccCccccccCCCc--cccccCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCcce
Q 021360          231 TLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEG--YSDVLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKT  308 (313)
Q Consensus       231 ~~lg~p~~~~g~v~~g~~~g~~~lg~ptan~~~~~--~~~~~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~  308 (313)
                      .++|+||.++|+|+||++|||+.||||||||.++.  ...++|  +.||||+|+.+ ++.+|+||+|||+||||++..++
T Consensus        18 ~~~Grpy~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~~~~p--~~GVYa~~v~~-~~~~~~gv~nIG~~PTf~~~~~~   94 (163)
T 1n08_A           18 VQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYR--DSGVYFGYAMV-QKRVFPMVMSVGWNPYYKNKLRS   94 (163)
T ss_dssp             CCTTCCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTS--CSEEEEEEEEE-TTEEEEEEEEEEECTTCSSCCEE
T ss_pred             CCCCCCEEEEEEEEeCCccCCCccCcCCCcccCcccccccCCC--CCEEEEEEEEE-CCEEEEEEEEeCCCCeECCCceE
Confidence            68999999999999999999655999999998752  213678  79999999998 66789999999999999877788


Q ss_pred             EeecC
Q 021360          309 IVSLT  313 (313)
Q Consensus       309 ~e~~~  313 (313)
                      ||+||
T Consensus        95 vEvhi   99 (163)
T 1n08_A           95 AEVHL   99 (163)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99996

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.95  E-value=1.3e-26  Score=193.36  Aligned_cols=203  Identities=16%  Similarity=0.143  Sum_probs=157.4

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhh---hhhh----------cCCCHH---HHHHHHHHHhCCCCC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---KHKI----------VGKTPL---EEAAIIVEDYGLPCA   71 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~---~~~~----------~g~~~~---~~~~~~~~~~~~~~~   71 (313)
                      |+|+|+||+||||+|+.+.+...+.++++++|.......   +...          .|....   .....+...++.+. 
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-   81 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDV-   81 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCH-
T ss_pred             CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCH-
Confidence            479999999999999999888899999999887644322   1111          144433   45556666666542 


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCc---hHHHHHHHHhhcCCccccceEEecCCCCCCC
Q 021360           72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGK  148 (313)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~k  148 (313)
                       ... ....+.+...+....++|++.++|+.+++.|++++++|++.   ...+...+ +.+++..+|+.+++++++...|
T Consensus        82 -~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k  158 (235)
T 2om6_A           82 -ELV-KRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYK  158 (235)
T ss_dssp             -HHH-HHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCT
T ss_pred             -HHH-HHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCC
Confidence             222 22222233333333469999999999999999999999998   88887777 7889999999999999999999


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      |+++.+..+++++|++|++|++|||+. ||+.+|+.+|+.+++++++.........++.+++++.++
T Consensus       159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el  225 (235)
T 2om6_A          159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANL  225 (235)
T ss_dssp             TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGH
T ss_pred             CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHH
Confidence            999999999999999999999999999 999999999999999988643333333477888888875

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.95  E-value=6.2e-27  Score=195.47  Aligned_cols=206  Identities=19%  Similarity=0.260  Sum_probs=161.3

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHH-cCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCC-----HHHHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFVNEVYS   81 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   81 (313)
                      ++|+|+||+||||+|+...+...+.+++++ +|.... .......|......+..++..++.+.+     ...+...+..
T Consensus         3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (234)
T 2hcf_A            3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA   81 (234)
T ss_dssp             CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHH
Confidence            579999999999999998888889998888 787765 445566777777767778887776533     1222233333


Q ss_pred             HHHhhh--ccCCCCchHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC-CCCCChHHHHHH
Q 021360           82 MFSDHL--CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEA  157 (313)
Q Consensus        82 ~~~~~~--~~~~~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~-~~kp~~~~~~~~  157 (313)
                      .+....  ....++|++.++|+.+++. |++++++|+++...+...+ +.+++..+|+.++++++.. ..||.+..++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~  160 (234)
T 2hcf_A           82 LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERA  160 (234)
T ss_dssp             HHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred             HHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence            333322  3467899999999999999 9999999999998888778 8889999999888877764 456788999999


Q ss_pred             HHHcC--CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccc--cccceeeccccccC
Q 021360          158 AKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDLR  215 (313)
Q Consensus       158 ~~~~~--~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~--~~s~~ii~~l~e~~  215 (313)
                      ++++|  ++|++|++|||+.+|+.+|+.+|+.++++.++.......  ..++.++.++.++.
T Consensus       161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~  222 (234)
T 2hcf_A          161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETD  222 (234)
T ss_dssp             HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHH
T ss_pred             HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHH
Confidence            99999  999999999999999999999999999998854433221  23788888888764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.95  E-value=6.1e-26  Score=185.23  Aligned_cols=196  Identities=18%  Similarity=0.264  Sum_probs=161.2

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++|+|+||+||||+++...+...+.++++++|............| .+....+..+.......   ......+...+...
T Consensus         3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   79 (207)
T 2go7_A            3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD---VEVLNQVRAQSLAE   79 (207)
T ss_dssp             -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC---HHHHHHHHHHHHTT
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc---HHHHHHHHHHHHHh
Confidence            579999999999999999888899999999998777777777777 66666665554333331   23334444444433


Q ss_pred             h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        87 ~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      . ....++|++.++++.+++.|++++++|++...... .+ +.+++..+|+.++++++....||+++.+..+++++|+++
T Consensus        80 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~  157 (207)
T 2go7_A           80 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS  157 (207)
T ss_dssp             CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred             ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCc
Confidence            3 56778999999999999999999999999988888 77 778999999999999998899999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ++|++|||+.+|+.|++.+|+.++++..+. .     .++.++.++.++
T Consensus       158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el  200 (207)
T 2go7_A          158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADI  200 (207)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHH
T ss_pred             ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHH
Confidence            999999999999999999999999988754 2     578888888775

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.94  E-value=3.1e-26  Score=191.13  Aligned_cols=197  Identities=23%  Similarity=0.239  Sum_probs=155.6

Q ss_pred             ccCccEEEEecCCccccChHHHHHHH-HHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVL-KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      ++++|+|+||+||||+|+...+...+ .++++++|...  .......+......+..+...     ........+.+.+.
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   94 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK-----RWKEATILYENSLE   94 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHh
Confidence            35689999999999999988777788 99999988765  333445555555544444321     23333344444444


Q ss_pred             --hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           85 --DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        85 --~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                        .......++|++.++|+.|++.|++++++|+++...+...+ +.+++..+|+.+++++++..+||+++.++.+++++|
T Consensus        95 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg  173 (231)
T 3kzx_A           95 KSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNIN  173 (231)
T ss_dssp             HCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHT
T ss_pred             hhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcC
Confidence              22246788999999999999999999999999999888888 889999999999999999999999999999999999


Q ss_pred             CCCC-cEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          163 MEPS-SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       163 ~~~~-~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      ++++ +|++|||+.+|+.+|+.+|+.++++.....     ..++.++.++.++.
T Consensus       174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~  222 (231)
T 3kzx_A          174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIR  222 (231)
T ss_dssp             CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHH
T ss_pred             CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHH
Confidence            9999 999999999999999999999999966322     24677888877753

>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*

Probab=99.94  E-value=4.9e-28  Score=183.65  Aligned_cols=79  Identities=47%  Similarity=0.926  Sum_probs=67.1

Q ss_pred             CCccccccceeeeecCCCcccCccccccCCCccccccCC-CCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeec
Q 021360          234 SEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSE-HPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSL  312 (313)
Q Consensus       234 g~p~~~~g~v~~g~~~g~~~lg~ptan~~~~~~~~~~p~-~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~  312 (313)
                      .+||.++|+|+||++|||+.||||||||.+++. +++|. ++.||||+|+.+.++.+|+||+|||+||||++..++||+|
T Consensus         2 ~~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~-~~~P~~~~~GVYa~~v~~~~~~~~~gv~nIG~~PT~~~~~~~vEvh   80 (147)
T 1nb0_A            2 HLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETH   80 (147)
T ss_dssp             CCSEEEEEECBCCSSSCGGGGTCCCEECCHHHH-HTSCTTCCSEEEEEEEEETTCCCEEEEEEEEECSSSSSSCEEEEEE
T ss_pred             CccEEEEEEEEeCCccCccccCCccEEEEcccc-ccCCCCCCCEEEEEEEEECCCCEEEEEEEecCCCeECCCceEEEEE
Confidence            379999999999999995559999999987554 67761 1379999999985566799999999999997767889999


Q ss_pred             C
Q 021360          313 T  313 (313)
Q Consensus       313 ~  313 (313)
                      |
T Consensus        81 i   81 (147)
T 1nb0_A           81 I   81 (147)
T ss_dssp             E
T ss_pred             E
Confidence            6

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.94  E-value=9.7e-26  Score=189.58  Aligned_cols=205  Identities=19%  Similarity=0.231  Sum_probs=154.3

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcC---CCCChhhhhhhc--C-----CCHHHHHHHHHHHh-CCCCCHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKHKIV--G-----KTPLEEAAIIVEDY-GLPCAKHEFV   76 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~--g-----~~~~~~~~~~~~~~-~~~~~~~~~~   76 (313)
                      |+|+|+||+||||+|+...+..++.+++++++   ............  +     ......+..++..+ +....  ...
T Consensus         1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~   78 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNP--KWI   78 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCH--HHH
T ss_pred             CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccc--hHH
Confidence            47899999999999999988888888888764   343433221111  0     11112244455555 44321  112


Q ss_pred             HHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHH
Q 021360           77 NEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL  155 (313)
Q Consensus        77 ~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~  155 (313)
                      ..+.+.+.... ....++|++.++|+.|++.|++++++|+++...+...+ +.+++..+|+.++++++++..||+|+.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~  157 (241)
T 2hoq_A           79 SAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFK  157 (241)
T ss_dssp             HHHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHH
Confidence            23333333332 34678999999999999999999999999988888777 88899999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccc---cccceeeccccccC
Q 021360          156 EAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY---TAADEVINSLLDLR  215 (313)
Q Consensus       156 ~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~---~~s~~ii~~l~e~~  215 (313)
                      .+++++|++|++|++|||+. +|+.+|+.+|+.++++..+.......   ..++.+++++.++.
T Consensus       158 ~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~  221 (241)
T 2hoq_A          158 KALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLL  221 (241)
T ss_dssp             HHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHH
T ss_pred             HHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHH
Confidence            99999999999999999998 99999999999999997654322222   25788888888763

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.94  E-value=1.2e-25  Score=186.94  Aligned_cols=203  Identities=24%  Similarity=0.398  Sum_probs=164.4

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++|+|+||+||||+++...+...+.++++++|.... ........+....+.+..+...++...... ....+.+.+...
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   81 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMR   81 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHH
Confidence            579999999999999999888899999999998877 445566778888888888888887654432 223333434332


Q ss_pred             h-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCCCC--CCChHHHHHHHHHcC
Q 021360           87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLN  162 (313)
Q Consensus        87 ~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~~~--kp~~~~~~~~~~~~~  162 (313)
                      . ....++|++.++++.++.   +++++|++....+...+ +++++..+| +.+++++++..+  ||++..++.+++++|
T Consensus        82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~  157 (229)
T 2fdr_A           82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG  157 (229)
T ss_dssp             HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred             hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcC
Confidence            2 457789999999988764   89999999998888778 778999999 999999888888  999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-----cccccc-cceeeccccccC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-----THRYTA-ADEVINSLLDLR  215 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-----~~~~~~-s~~ii~~l~e~~  215 (313)
                      +++++|++|||+.+|+.+|+.+|+.++++......     ...... ++.++.++.++.
T Consensus       158 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~  216 (229)
T 2fdr_A          158 VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLP  216 (229)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHH
T ss_pred             CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHH
Confidence            99999999999999999999999999999875432     112222 889999988753

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.94  E-value=1.1e-25  Score=191.87  Aligned_cols=204  Identities=22%  Similarity=0.243  Sum_probs=162.4

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh------------------cCCCHHH----HHHHHHHHh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLE----EAAIIVEDY   66 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~g~~~~~----~~~~~~~~~   66 (313)
                      +|+|+||+||||+++...+..++.++++++|...+.......                  .|.....    .+...+..+
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~   80 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA   80 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence            589999999999999887888899999999998776554221                  2443333    344555555


Q ss_pred             CCCCCHHHHHHHHHHHHHhhhc--cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           67 GLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      +. .+...+.......+.....  ...++|++.++|+.|++.|++++++||++.. +...+ +.+|+..+|+.+++++++
T Consensus        81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~  157 (263)
T 3k1z_A           81 GV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAA  157 (263)
T ss_dssp             TC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHH
T ss_pred             CC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeeccc
Confidence            55 3445554555555554442  4579999999999999999999999998775 56667 889999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccc---cccccceeeccccccC
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDLR  215 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~---~~~~s~~ii~~l~e~~  215 (313)
                      ...||+|+.+..+++++|++|++|++|||+. +|+.+|+++|+.++++.++.....   ....++.++.++.++.
T Consensus       158 ~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~  232 (263)
T 3k1z_A          158 GWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLL  232 (263)
T ss_dssp             SSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHH
Confidence            9999999999999999999999999999997 999999999999999998643222   1236899999998874

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.94  E-value=3.5e-25  Score=183.33  Aligned_cols=207  Identities=23%  Similarity=0.270  Sum_probs=160.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      |++|+|+||+||||+++...+...+.++++++|.. .+...+....|.........+.... .......+...+...+..
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADI   82 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHH
Confidence            35799999999999999998889999999999876 4555566666776665554443211 000111222233333333


Q ss_pred             hh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        86 ~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      .. ....++|++.++++.+++.|++++++|+.....+...+ +.+++..+|+.++++++....||++..+..+++++|++
T Consensus        83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~  161 (225)
T 3d6j_A           83 YMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC  161 (225)
T ss_dssp             HTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC
T ss_pred             hccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC
Confidence            32 35678999999999999999999999999988888777 78899999999999998888999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-c-cccceeeccccccC
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-Y-TAADEVINSLLDLR  215 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~-~~s~~ii~~l~e~~  215 (313)
                      ++++++|||+.+|+.|++.+|+.++++..+...... . ..++.++.++.++.
T Consensus       162 ~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~  214 (225)
T 3d6j_A          162 PEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLI  214 (225)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC
T ss_pred             hHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHH
Confidence            999999999999999999999999998875432222 2 23789999988874

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.94  E-value=7.3e-26  Score=189.31  Aligned_cols=200  Identities=18%  Similarity=0.219  Sum_probs=159.2

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcC------------CC----HHHHHHHHHHHhCCCC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------KT----PLEEAAIIVEDYGLPC   70 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g------------~~----~~~~~~~~~~~~~~~~   70 (313)
                      +++|+|+||+||||+|+...+..++.++++++|...+........+            ..    ....+..++..++.+.
T Consensus         4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (240)
T 3smv_A            4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP   83 (240)
T ss_dssp             GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999999999999999998887665533221            11    2234556667777664


Q ss_pred             CHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCC
Q 021360           71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS  150 (313)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~  150 (313)
                      ...     ....+........++|++.++|+.|++ |++++++||++...+...+ +.  +..+|+.+++++++...||+
T Consensus        84 ~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~KP~  154 (240)
T 3smv_A           84 DAA-----EREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYKPN  154 (240)
T ss_dssp             CHH-----HHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCTTS
T ss_pred             CHH-----HHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCCCC
Confidence            432     223344455677899999999999999 7999999999998887777 44  66789999999999999999


Q ss_pred             hHHHHHH---HHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCC-------C-ccccccccceeeccccccC
Q 021360          151 PDIFLEA---AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP-------K-QTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       151 ~~~~~~~---~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~-------~-~~~~~~~s~~ii~~l~e~~  215 (313)
                      |+.|..+   ++++|++|++|++|||+. +|+.+|+.+|+.+++++...       . .......++.+++++.++.
T Consensus       155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~  231 (240)
T 3smv_A          155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMA  231 (240)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHH
Confidence            9999988   889999999999999996 99999999999999998641       1 1222357899999998763

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.94  E-value=5.5e-25  Score=187.37  Aligned_cols=207  Identities=20%  Similarity=0.285  Sum_probs=149.0

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHH----cCCCCChhhh-----hhhcC-------CCHHHH----HHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVK----YGKEWDGREK-----HKIVG-------KTPLEE----AAIIVED   65 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~----~g~~~~~~~~-----~~~~g-------~~~~~~----~~~~~~~   65 (313)
                      .+++|+|+||+||||+|+...+..++.++++.    +|........     ....+       ......    +...+..
T Consensus        15 ~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (260)
T 2gfh_A           15 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE   94 (260)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence            35789999999999999999888888888764    4444311111     11111       111111    1122222


Q ss_pred             -hCCCCCHHHHHHHHHHHHHh-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC
Q 021360           66 -YGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE  143 (313)
Q Consensus        66 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~  143 (313)
                       .+.... ......+.+.+.. ......++||+.++|+.|++ +++++++||++...+...+ +.+|+..+|+.++++++
T Consensus        95 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~~~  171 (260)
T 2gfh_A           95 TKGGADN-RKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGE  171 (260)
T ss_dssp             HHCSSCC-HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGG
T ss_pred             hcCccch-HHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEecCC
Confidence             122112 2222233333322 23467899999999999998 5999999999999888888 88999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCC-eEEEeCCCCCc-cccccccceeeccccccC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGM-EVVAVPSLPKQ-THRYTAADEVINSLLDLR  215 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~-~~i~v~~~~~~-~~~~~~s~~ii~~l~e~~  215 (313)
                      +..+||+|+.|..+++++|++|++|++|||+ .+|+.+|+++|+ .++++...... ......++.++.++.++.
T Consensus       172 ~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~  246 (260)
T 2gfh_A          172 QKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP  246 (260)
T ss_dssp             SSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHH
Confidence            9999999999999999999999999999996 899999999999 78988764322 112335888898888763

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.94  E-value=1.1e-25  Score=191.67  Aligned_cols=126  Identities=12%  Similarity=0.080  Sum_probs=108.9

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHh---hcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~---~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      ....++||+.++|+.|++.|++++++||++....+..+ +   ..++..+|+.++++ +++ +||+|+.|..+++++|++
T Consensus       127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~  203 (261)
T 1yns_A          127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCS  203 (261)
T ss_dssp             CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred             cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence            45789999999999999999999999999998887777 5   34699999999998 888 999999999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcc-c-cccccceeeccccccCc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-H-RYTAADEVINSLLDLRP  216 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~-~~~~s~~ii~~l~e~~~  216 (313)
                      |++|++|||+.+|+.+|+++|+.++++.+..... . ....++.+++++.++..
T Consensus       204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~  257 (261)
T 1yns_A          204 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYL  257 (261)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC
T ss_pred             cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCc
Confidence            9999999999999999999999999997633221 1 12357889999988754

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.93  E-value=4.9e-25  Score=185.97  Aligned_cols=200  Identities=17%  Similarity=0.230  Sum_probs=155.2

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhhcCCC--------------------HHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKT--------------------PLEEAAIIVED   65 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~--------------------~~~~~~~~~~~   65 (313)
                      +++|+|+||+||||+++...+...+.++++++|.+...... ..+.+..                    ....+..+++.
T Consensus        13 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (254)
T 3umg_A           13 RNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRE   92 (254)
T ss_dssp             SBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999988765433 2222210                    12333445555


Q ss_pred             hCC---CCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC
Q 021360           66 YGL---PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD  142 (313)
Q Consensus        66 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~  142 (313)
                      ++.   .....     ..+.+...+....++|++.++|+.+++. ++++++||++...+...+ +.+++.  |+.+++++
T Consensus        93 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~~~  163 (254)
T 3umg_A           93 SGIDPTNHDSG-----ELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIGSD  163 (254)
T ss_dssp             TTCCGGGSCHH-----HHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCCHH
T ss_pred             hCCCcCcCCHH-----HHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEEcC
Confidence            555   22221     1222334446678899999999999997 999999999998888777 777875  89999998


Q ss_pred             CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC----CCccc---cccccceeeccccccC
Q 021360          143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL----PKQTH---RYTAADEVINSLLDLR  215 (313)
Q Consensus       143 ~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~----~~~~~---~~~~s~~ii~~l~e~~  215 (313)
                      ++...||++..++.+++++|+++++|++|||+.+|+.+|+.+|+.+++++..    .....   ....++.+++++.++.
T Consensus       164 ~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~  243 (254)
T 3umg_A          164 INRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLA  243 (254)
T ss_dssp             HHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHH
Confidence            8899999999999999999999999999999999999999999999999842    21111   1346889999998864

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.93  E-value=1.7e-25  Score=186.17  Aligned_cols=202  Identities=19%  Similarity=0.241  Sum_probs=151.4

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCCh---------hhhhhhcCCC------HHHHHHHHHHHhCCCCC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGKT------PLEEAAIIVEDYGLPCA   71 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~g~~------~~~~~~~~~~~~~~~~~   71 (313)
                      +++|+|+||+||||+++...+..+...+. ..+.....         .......+..      ....+..+++.++.+.+
T Consensus         3 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (230)
T 3um9_A            3 HAIKAVVFDLYGTLYDVYSVRTSCERIFP-GQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLALD   81 (230)
T ss_dssp             SSCCEEEECSBTTTBCGGGGHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCceEEEEcCCCCcCcchHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCCC
Confidence            57899999999999999776654433211 11000000         0001111111      13445566777777654


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCCh
Q 021360           72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      ....     +.+...+....++|++.++++.+++.|++++++|+++...+...+ +.+++..+|+.+++++++...||++
T Consensus        82 ~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~  155 (230)
T 3um9_A           82 ADGE-----AHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSFDHLISVDEVRLFKPHQ  155 (230)
T ss_dssp             HHHH-----HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTCH
T ss_pred             HHHH-----HHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhcceeEehhhcccCCCCh
Confidence            4322     222233467889999999999999999999999999999888888 7889999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcc-ccccccceeeccccccC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLR  215 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~s~~ii~~l~e~~  215 (313)
                      ..++.+++++|+++++|++|||+.+|+.+|+.+|+.++++.++.... .....++.+++++.++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  220 (230)
T 3um9_A          156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLA  220 (230)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHH
T ss_pred             HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHH
Confidence            99999999999999999999999999999999999999998854322 22347899999998864

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.93  E-value=7.2e-25  Score=186.93  Aligned_cols=208  Identities=18%  Similarity=0.234  Sum_probs=160.2

Q ss_pred             cCccEEEEecCCccccChH-HHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHH----------HHhCCCCCHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKHEF   75 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~   75 (313)
                      |++|+|+||+||||+|+.. .+...+.++++++|............|.........+.          ..++...+....
T Consensus         4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI   83 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred             CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHH
Confidence            4589999999999999987 67788899999999887766666666766554433332          234444443332


Q ss_pred             H---HHHHHHHHh-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCCCCCCC
Q 021360           76 V---NEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS  150 (313)
Q Consensus        76 ~---~~~~~~~~~-~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~~~kp~  150 (313)
                      .   ..+...+.. ......++|++.++++.+++.|++++++|+.+...+...+ +.+++..+| +.+++++++..+||+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~  162 (267)
T 1swv_A           84 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPY  162 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTS
T ss_pred             HHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCC
Confidence            2   222222222 2245778999999999999999999999999988887777 667777775 888888888899999


Q ss_pred             hHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc------------------------ccc-cccc
Q 021360          151 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAA  204 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~-~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~------------------------~~~-~~~s  204 (313)
                      ++.+..+++++|+++ ++|++|||+.||+.|++.+|+.++++.++...                        ... ...+
T Consensus       163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  242 (267)
T 1swv_A          163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA  242 (267)
T ss_dssp             SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence            999999999999999 99999999999999999999999999986541                        111 2248


Q ss_pred             ceeeccccccC
Q 021360          205 DEVINSLLDLR  215 (313)
Q Consensus       205 ~~ii~~l~e~~  215 (313)
                      +.++.++.++.
T Consensus       243 d~v~~~~~el~  253 (267)
T 1swv_A          243 HFTIETMQELE  253 (267)
T ss_dssp             SEEESSGGGHH
T ss_pred             ceeccCHHHHH
Confidence            88999988763

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.93  E-value=4.2e-25  Score=184.27  Aligned_cols=202  Identities=15%  Similarity=0.234  Sum_probs=150.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChh---------hhhhhc----CC--C----HHHHHHHHHHHhC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---------EKHKIV----GK--T----PLEEAAIIVEDYG   67 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~----g~--~----~~~~~~~~~~~~~   67 (313)
                      +++|+|+||+||||+++...+..+. +.+...+..+...         ......    +.  .    ....+..++..++
T Consensus         2 ~~~k~i~FDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (233)
T 3umb_A            2 TSIRAVVFDAYGTLFDVYSVAARAE-QLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLN   80 (233)
T ss_dssp             CCCCEEEECSBTTTEETHHHHHHHH-HHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEeCCCcccccHHHHHHHH-HHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHcC
Confidence            4689999999999999976654433 2221111110000         000111    11  1    2234455667777


Q ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC
Q 021360           68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG  147 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~  147 (313)
                      .+.+.... ..+.+    .+....++|++.++|+.|++.|++++++||++...+...+ +.+++..+|+.++++++....
T Consensus        81 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~  154 (233)
T 3umb_A           81 LPLGNHAE-ATLMR----EYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVDAVRLY  154 (233)
T ss_dssp             CCCCHHHH-HHHHH----HHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGGGTTCC
T ss_pred             CCCCHHHH-HHHHH----HHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEecccCCC
Confidence            76544332 22222    2345788999999999999999999999999999888888 889999999999999999999


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-cccccccceeeccccccC
Q 021360          148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLR  215 (313)
Q Consensus       148 kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~s~~ii~~l~e~~  215 (313)
                      ||+++.+..+++++|++|++|++|||+.+|+.+|+.+|+.++++.++... ......++.+++++.++.
T Consensus       155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~  223 (233)
T 3umb_A          155 KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLL  223 (233)
T ss_dssp             TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred             CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHH
Confidence            99999999999999999999999999999999999999999999885433 223446899999998864

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=5.6e-25  Score=188.83  Aligned_cols=204  Identities=21%  Similarity=0.326  Sum_probs=158.2

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      ++|+|+||+||||+|+...+...+.+++++++. .... ......|.........+....    ........+...+...
T Consensus        34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  108 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDF----ADEEYVNKLEGEIPEK  108 (275)
T ss_dssp             EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGG----CCHHHHHHHHHTHHHH
T ss_pred             cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccC----CcHHHHHHHHHHHHHH
Confidence            479999999999999999888889998888874 3333 334455766665555443321    1123333333333332


Q ss_pred             -hccCCCCchHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC-
Q 021360           87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-  163 (313)
Q Consensus        87 -~~~~~~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~-  163 (313)
                       .....++|++.++|+.+++. |++++++|++....+...+ +.+++. .|+.+++++++..+||+|+.+..+++++|+ 
T Consensus       109 ~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~  186 (275)
T 2qlt_A          109 YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFP  186 (275)
T ss_dssp             HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCC
T ss_pred             HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCC
Confidence             24567899999999999999 9999999999998888777 777876 488999999988999999999999999999 


Q ss_pred             ------CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-ccccceeeccccccCccc
Q 021360          164 ------EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLRPEK  218 (313)
Q Consensus       164 ------~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~~s~~ii~~l~e~~~~~  218 (313)
                            ++++|++|||+.+|+.+|+.+|+.++++.++...... ...++.++.++.++..+.
T Consensus       187 ~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~~  248 (275)
T 2qlt_A          187 INEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGE  248 (275)
T ss_dssp             CCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEECC
T ss_pred             ccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChhh
Confidence                  9999999999999999999999999999886443322 235899999999876544

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=2.5e-24  Score=179.09  Aligned_cols=199  Identities=19%  Similarity=0.216  Sum_probs=146.6

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhh-----------hhcCCCHHH----HHHHHHHHhCCCCCHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-----------KIVGKTPLE----EAAIIVEDYGLPCAKH   73 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~g~~~~~----~~~~~~~~~~~~~~~~   73 (313)
                      +|+|+||+||||+++...+..++..+.+.+..........           ...+.....    .........+...+.+
T Consensus         8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAAD   87 (234)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred             ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHH
Confidence            8999999999999999888888776666554322322221           234444433    2333344445554444


Q ss_pred             HHHHHHHHHHHhh-hccCCCCchHHHHHHHHHHCC-CCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCCh
Q 021360           74 EFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        74 ~~~~~~~~~~~~~-~~~~~~~pgv~e~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      .. ..+.+.+... .....++|++.++++.+++.| ++++++|+++...+...+ +.+++..+|+.++++     .||++
T Consensus        88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~  160 (234)
T 3ddh_A           88 II-RQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTE  160 (234)
T ss_dssp             HH-HHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSH
T ss_pred             HH-HHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCH
Confidence            33 3333434333 346789999999999999999 999999999988888778 888999999998864     68999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCC----Cccccccc-cceeecccccc
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP----KQTHRYTA-ADEVINSLLDL  214 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~----~~~~~~~~-s~~ii~~l~e~  214 (313)
                      +.++.+++++|++|++|++|||+. +|+.+|+.+|+.++++..+.    ........ ++.+++++.++
T Consensus       161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el  229 (234)
T 3ddh_A          161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL  229 (234)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred             HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence            999999999999999999999997 99999999999999995532    22221223 48888888876

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.93  E-value=6.3e-25  Score=185.61  Aligned_cols=201  Identities=17%  Similarity=0.259  Sum_probs=155.3

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhh-hhcCC----------------C----HHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGK----------------T----PLEEAAIIVE   64 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~g~----------------~----~~~~~~~~~~   64 (313)
                      .|++|+|+||+||||+++...+...+.++++++|......... .+.+.                .    ....+..++.
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAG   98 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999887654331 11110                0    1223444555


Q ss_pred             HhCCCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      .++........     ..+...+....++|++.++|+.+++. ++++++|+.+...+...+ +.+++.  |+.+++++++
T Consensus        99 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~~  169 (254)
T 3umc_A           99 EFGLALDEALL-----QRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCADLF  169 (254)
T ss_dssp             HTTCCCCHHHH-----HHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHHHH
T ss_pred             HhCCCCCHHHH-----HHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeeccc
Confidence            55554333221     22333445678899999999999986 999999999998888777 777875  8999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC----CCCc-ccc--ccccceeeccccccC
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQ-THR--YTAADEVINSLLDLR  215 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~----~~~~-~~~--~~~s~~ii~~l~e~~  215 (313)
                      ..+||+++.|+.+++++|++|++|++|||+.+|+.+|+.+|+.++++++    +... ...  ...++.+++++.++.
T Consensus       170 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~  247 (254)
T 3umc_A          170 GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLH  247 (254)
T ss_dssp             TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHH
T ss_pred             ccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHH
Confidence            9999999999999999999999999999999999999999999999984    2211 111  346899999998764

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.93  E-value=5.6e-25  Score=180.34  Aligned_cols=188  Identities=19%  Similarity=0.228  Sum_probs=143.7

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-Hh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF-SD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   85 (313)
                      +++|+|+||+||||+++...+    .++++++|..........+.+....               .......+...+ ..
T Consensus         4 ~~~k~iifDlDGTL~d~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~   64 (205)
T 3m9l_A            4 SEIKHWVFDMDGTLTIAVHDF----AAIREALSIPAEDDILTHLAALPAD---------------ESAAKHAWLLEHERD   64 (205)
T ss_dssp             GGCCEEEECTBTTTEEEEECH----HHHHHHTTCCTTSCHHHHHHHSCHH---------------HHHHHHHHHHHTHHH
T ss_pred             ccCCEEEEeCCCcCcccHHHH----HHHHHHhCCCchHHHHHHHhcCChH---------------HHHHHHHHHHHHHHH
Confidence            468999999999999986644    3566677876553322222111111               111111222222 22


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc--ceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f--~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ......++|++.++|+.+++.|++++++|+++...+...+ +.+++..+|  +.+++++. ..+||+++.++.+++++|+
T Consensus        65 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~  142 (205)
T 3m9l_A           65 LAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDV  142 (205)
T ss_dssp             HEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTC
T ss_pred             HhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCC
Confidence            2356788999999999999999999999999999888888 889999999  78887766 7899999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCcc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE  217 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~  217 (313)
                      ++++|++|||+.+|+.+|+.+|+.++++..+..  .....++.+++++.|+...
T Consensus       143 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~--~~~~~ad~v~~~~~el~~~  194 (205)
T 3m9l_A          143 SPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDN--PWPELTDWHARDCAQLRDL  194 (205)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEECSSSSC--SCGGGCSEECSSHHHHHHH
T ss_pred             CHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCC--cccccCCEEeCCHHHHHHH
Confidence            999999999999999999999999999988543  2233689999999887543

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.93  E-value=6.1e-24  Score=177.28  Aligned_cols=201  Identities=16%  Similarity=0.253  Sum_probs=145.3

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC---------hhhhhhhcCC------CHHHHHHHHHHHhCCCCCH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD---------GREKHKIVGK------TPLEEAAIIVEDYGLPCAK   72 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~   72 (313)
                      |+|+|+||+||||+|+...+..++..+. ..+....         ........+.      .....+..++..++.....
T Consensus         3 m~k~viFDlDGTL~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (232)
T 1zrn_A            3 YIKGIAFDLYGTLFDVHSVVGRCDEAFP-GRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDA   81 (232)
T ss_dssp             CCCEEEECSBTTTEETHHHHHHHHHHST-TTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred             CceEEEEecCCcccCchhhHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCCCH
Confidence            5799999999999999876654443110 0000000         0000001111      0122334445555554432


Q ss_pred             HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChH
Q 021360           73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD  152 (313)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~  152 (313)
                      ...     +.+...+....++|++.++|+.|++.|++++++|+++...+...+ +.+++..+|+.+++++++..+||+|+
T Consensus        82 ~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~  155 (232)
T 1zrn_A           82 RTR-----STLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNR  155 (232)
T ss_dssp             HHH-----HHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHH
T ss_pred             HHH-----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheEEEecccCCCCCCHH
Confidence            221     122333456788999999999999999999999999998888888 78899999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc-cccccccceeeccccccC
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLR  215 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~-~~~~~~s~~ii~~l~e~~  215 (313)
                      .++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++... ......++.++.++.++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  219 (232)
T 1zrn_A          156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVV  219 (232)
T ss_dssp             HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHH
T ss_pred             HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHH
Confidence            999999999999999999999999999999999999999875332 222345788899888763

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.93  E-value=5.4e-24  Score=178.67  Aligned_cols=202  Identities=16%  Similarity=0.244  Sum_probs=144.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCC---------ChhhhhhhcCC--C----HHHHHHHHHHHhCCCCC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---------DGREKHKIVGK--T----PLEEAAIIVEDYGLPCA   71 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~g~--~----~~~~~~~~~~~~~~~~~   71 (313)
                      |++|+|+||+||||+|+...+..++..+. ..+...         .........+.  .    ....+..++..++....
T Consensus        12 M~~k~viFDlDGTL~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (240)
T 2no4_A           12 DSLRACVFDAYGTLLDVHSAVMRNADEVG-ASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDR   90 (240)
T ss_dssp             SCCCEEEECCBTTTBCTTHHHHTTHHHHC-TTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCTTH
T ss_pred             ccccEEEEeCCCcccccHhHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            35799999999999999876654333210 000000         00000111111  0    11223334444544322


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCCh
Q 021360           72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      . +....    +...+....++|++.++|+.|++.|++++++||++...+...+ +.+|+..+|+.++++++++..||++
T Consensus        91 ~-~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~  164 (240)
T 2no4_A           91 K-GLKDR----LMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDP  164 (240)
T ss_dssp             H-HHHHH----HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSH
T ss_pred             H-HHHHH----HHHHHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCH
Confidence            1 11222    2223345789999999999999999999999999999888888 7889999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccccccc-ceeeccccccC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA-DEVINSLLDLR  215 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s-~~ii~~l~e~~  215 (313)
                      +.++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.........+ +.+++++.++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~  229 (240)
T 2no4_A          165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELW  229 (240)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHH
T ss_pred             HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHH
Confidence            99999999999999999999999999999999999999998864422223356 88888888763

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.93  E-value=1.4e-25  Score=187.25  Aligned_cols=202  Identities=19%  Similarity=0.230  Sum_probs=148.8

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHH---HcCCCCC----------hhhhhhhcCCCH-------HHHHHHHHHHhC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLV---KYGKEWD----------GREKHKIVGKTP-------LEEAAIIVEDYG   67 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~---~~g~~~~----------~~~~~~~~g~~~-------~~~~~~~~~~~~   67 (313)
                      |+|+|+||+||||+++...+......+.+   +.|.+..          ...+....|...       ...+..+...++
T Consensus         1 Mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~   80 (234)
T 3u26_A            1 MIRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYG   80 (234)
T ss_dssp             CCCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcC
Confidence            47999999999999998655444444443   3344311          011112222211       123445555555


Q ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC
Q 021360           68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG  147 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~  147 (313)
                      ..... ......   .........++|++.++|+.+++. ++++++|+++...+...+ +.+++..+|+.++++++....
T Consensus        81 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~  154 (234)
T 3u26_A           81 FKYPE-NFWEIS---LRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFF  154 (234)
T ss_dssp             CCCCT-THHHHH---HHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBC
T ss_pred             chHHH-HHHHHH---HHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCC
Confidence            43211 111111   112223568899999999999999 999999999998888888 889999999999999999999


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       148 kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      ||+++.++.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.........++.++.++.++.
T Consensus       155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~  223 (234)
T 3u26_A          155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVI  223 (234)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHH
T ss_pred             CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHH
Confidence            9999999999999999999999999998 9999999999999999987554444457899999998864

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.93  E-value=3.5e-24  Score=181.12  Aligned_cols=201  Identities=11%  Similarity=0.042  Sum_probs=135.9

Q ss_pred             cCccEEEEecCCccccChHH-------HHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH-
Q 021360            7 KLMSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN-   77 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~-------~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-   77 (313)
                      +++|+|+||+||||+|++..       +...+...+++.+...... ....+.+....+....+...++.......+.. 
T Consensus        29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~  108 (253)
T 2g80_A           29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL  108 (253)
T ss_dssp             CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred             CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHH
Confidence            35799999999999999643       3334445555555443222 22334444555555555555443322111211 


Q ss_pred             ---HHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc-----------CCccccceEEecCC
Q 021360           78 ---EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-----------GWNESFSVIVGSDE  143 (313)
Q Consensus        78 ---~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~-----------~~~~~f~~v~~~~~  143 (313)
                         .+.+.+........++||+.++|+.    |++++++||++...++..+ ++.           ++..+|+.++.. .
T Consensus       109 ~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~  182 (253)
T 2g80_A          109 QGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-N  182 (253)
T ss_dssp             HHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-H
T ss_pred             HHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-e
Confidence               2233333323356889999999988    8999999999999888777 544           466667776654 3


Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      +...||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+..........++.++.+|.+
T Consensus       183 ~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e  252 (253)
T 2g80_A          183 TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFET  252 (253)
T ss_dssp             HHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTT
T ss_pred             ccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhh
Confidence            3136999999999999999999999999999999999999999999997732211111125677777765

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.92  E-value=3.1e-24  Score=173.44  Aligned_cols=176  Identities=22%  Similarity=0.238  Sum_probs=138.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL   87 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (313)
                      ++|+|+||+||||+|+...+...+.++++++|...+........+...   ...+....+..   ..+...+.+.+....
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~   78 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVST---PFAIETFAPNL---ENFLEKYKENEAREL   78 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCH---HHHHHHHCTTC---TTHHHHHHHHHHHHT
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHcccc---HHHHHHHhhhH---HHHHHHHHHHHHHhc
Confidence            479999999999999999899999999999998877655443322111   12222222211   122233333344444


Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ....++|++.++++.+++.|++++++|+.+. .+...+ +.+++..+|+.+++++++..+||+++.++.+++++|++  +
T Consensus        79 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~  154 (190)
T 2fi1_A           79 EHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--S  154 (190)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--S
T ss_pred             CcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--e
Confidence            4445899999999999999999999998875 566666 78899999999999999999999999999999999998  9


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      |++|||+.+|+.+|+.+|+.++++.+
T Consensus       155 ~~~iGD~~~Di~~a~~aG~~~~~~~~  180 (190)
T 2fi1_A          155 GLVIGDRPIDIEAGQAAGLDTHLFTS  180 (190)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             EEEEcCCHHHHHHHHHcCCeEEEECC
Confidence            99999999999999999999999876

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.92  E-value=6.1e-24  Score=179.62  Aligned_cols=201  Identities=15%  Similarity=0.141  Sum_probs=148.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHH---HcCCCC----Chh----hhh--hhcCCCHHHHHHHHH----HHhCCC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLV---KYGKEW----DGR----EKH--KIVGKTPLEEAAIIV----EDYGLP   69 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~---~~g~~~----~~~----~~~--~~~g~~~~~~~~~~~----~~~~~~   69 (313)
                      |++|+|+||+||||+|+...+..++.++++   +.|...    ...    ...  ...|.........+.    ...+..
T Consensus        11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~   90 (251)
T 2pke_A           11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR   90 (251)
T ss_dssp             CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred             CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence            358999999999999999988888888774   556554    110    111  245776655544433    234443


Q ss_pred             CCHHHHHHHHHHHHHhh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCC
Q 021360           70 CAKHEFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK  148 (313)
Q Consensus        70 ~~~~~~~~~~~~~~~~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~k  148 (313)
                      ... .....+.+.+... .....++|++.++|+.++ .|++++++|+++...+...+ +.+++..+|+.++++     .|
T Consensus        91 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~k  162 (251)
T 2pke_A           91 IEA-RDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SE  162 (251)
T ss_dssp             CCH-HHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SC
T ss_pred             CCh-HHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CC
Confidence            332 3333444444433 345788999999999999 89999999999988888777 788999999988773     68


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcc----c-c-ccccce-eeccccccC
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----H-R-YTAADE-VINSLLDLR  215 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~----~-~-~~~s~~-ii~~l~e~~  215 (313)
                      |+++.+..+++++|++|++|++|||+. +|+.+|+.+|+.++++..+....    . . ...++. +++++.++.
T Consensus       163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~  237 (251)
T 2pke_A          163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWP  237 (251)
T ss_dssp             CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHH
T ss_pred             CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHH
Confidence            999999999999999999999999999 99999999999999997753211    1 1 235776 788887763

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.92  E-value=2.2e-24  Score=179.59  Aligned_cols=201  Identities=19%  Similarity=0.277  Sum_probs=148.7

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHc---CCCCC---hhhhhhh----------cCC----CHHHHHHHHHHHhC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWD---GREKHKI----------VGK----TPLEEAAIIVEDYG   67 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~----------~g~----~~~~~~~~~~~~~~   67 (313)
                      |+|+|+||+||||+++...+......+.+.+   +....   ...+...          ...    ........++...+
T Consensus         1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG   80 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred             CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence            4799999999999999887776655554433   32221   1111100          000    11233444555566


Q ss_pred             CCCC-HHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCC
Q 021360           68 LPCA-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT  146 (313)
Q Consensus        68 ~~~~-~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~  146 (313)
                      ++.. ...+.....+.+........++|++.++|+.|++. ++++++||++..     + +.+++..+|+.++++++++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l-~~~~l~~~f~~~~~~~~~~~  153 (230)
T 3vay_A           81 YDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V-RRLGLADYFAFALCAEDLGI  153 (230)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G-GGSTTGGGCSEEEEHHHHTC
T ss_pred             CChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h-hhcCcHHHeeeeEEccccCC
Confidence            5421 12233344444544556788999999999999998 999999998765     4 77899999999999999999


Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      +||+++.++.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.........++.+++++.++.
T Consensus       154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~  223 (230)
T 3vay_A          154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLP  223 (230)
T ss_dssp             CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHH
T ss_pred             CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHH
Confidence            99999999999999999999999999998 9999999999999999885543322457899999998864

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.92  E-value=3.7e-24  Score=175.99  Aligned_cols=177  Identities=17%  Similarity=0.174  Sum_probs=132.9

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCC-----------CHHHHHHHHHHHhCCCCCHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-----------TPLEEAAIIVEDYGLPCAKHEF   75 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~   75 (313)
                      +|+|+|+||+||||+|+...+.   ...++++|..........+.+.           ...+....+...++...+...+
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   79 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQV   79 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHH
T ss_pred             ccceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence            4579999999999999976543   4556677765433322222222           2333334444444433332222


Q ss_pred             HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhh------cCCccccceEEecCCCCCCCC
Q 021360           76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKP  149 (313)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~------~~~~~~f~~v~~~~~~~~~kp  149 (313)
                      ..    .+..  ....++|++.++|+.|++ |++++++||++...+...+ +.      +++..+|+.++++++++..||
T Consensus        80 ~~----~~~~--~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp  151 (211)
T 2i6x_A           80 YD----ALLG--FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKP  151 (211)
T ss_dssp             HH----HHGG--GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTT
T ss_pred             HH----HHHH--hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCC
Confidence            11    1111  234678999999999999 9999999999988887777 66      799999999999999999999


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      +|+.++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++.+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~  196 (211)
T 2i6x_A          152 NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG  196 (211)
T ss_dssp             SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence            999999999999999999999999999999999999999998874

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.91  E-value=5.7e-24  Score=173.48  Aligned_cols=177  Identities=19%  Similarity=0.240  Sum_probs=132.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhh------cC-CCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI------VG-KTPLEEAAIIVEDYGLPCAKHEFVNEV   79 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (313)
                      ++|+|+||+||||+|+.. ....+..+++++|........ ...      .+ ......+..+....+......    .+
T Consensus         3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~   77 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPE----DF   77 (200)
T ss_dssp             CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHH----HH
T ss_pred             CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHH----HH
Confidence            579999999999999864 245677788888865432211 110      11 122222222222222111211    11


Q ss_pred             HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        80 ~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      .+.+   .....++|++.++|+.|++.| +++++|+++...+...+ +.+++..+|+.+++++++...||+|+.+..+++
T Consensus        78 ~~~~---~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~  152 (200)
T 3cnh_A           78 RAVM---EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLT  152 (200)
T ss_dssp             HHHH---HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHH
T ss_pred             HHHH---HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHH
Confidence            1111   234569999999999999999 99999999999888888 788999999999999998999999999999999


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++|+++++|++|||+.+|+.+|+.+|+.++++.++
T Consensus       153 ~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          153 LAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             HHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred             HcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence            99999999999999999999999999999999874

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.91  E-value=3.2e-23  Score=178.32  Aligned_cols=207  Identities=14%  Similarity=0.135  Sum_probs=146.7

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHc---CCCCChhhhhhhcCC---CHHHHHHHHHHHhCCCCCHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGK---TPLEEAAIIVEDYGLPCAKHEFVNEV   79 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (313)
                      ..++|+|+||+||||+++...+...+.+.++++   +..++..........   .....+..+....+++  ...+...+
T Consensus        54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~  131 (282)
T 3nuq_A           54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVN--ALEYNRLV  131 (282)
T ss_dssp             -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSSC--HHHHHHHH
T ss_pred             CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCCC--HHHHHHHH
Confidence            346899999999999999877777766666653   233333332211100   0011223344444442  33222221


Q ss_pred             HHHHHhhhccCCCCchHHHHHHHHHHCCC--CEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC----CCCCCChHH
Q 021360           80 YSMFSDHLCKVKALPGANRLIKHLSCHGV--PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDI  153 (313)
Q Consensus        80 ~~~~~~~~~~~~~~pgv~e~l~~l~~~g~--~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~----~~~kp~~~~  153 (313)
                      ... ........++|++.++|+.|++.|+  +++++||+....+...+ +.+++..+|+.++++++.    ..+||+++.
T Consensus       132 ~~~-~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~  209 (282)
T 3nuq_A          132 DDS-LPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKA  209 (282)
T ss_dssp             TTT-SCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHH
T ss_pred             hhh-hhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHH
Confidence            111 1112357899999999999999999  99999999999888888 789999999999987655    467999999


Q ss_pred             HHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCC-eEEEeCCCCCcc--ccccccceeeccccccCc
Q 021360          154 FLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGM-EVVAVPSLPKQT--HRYTAADEVINSLLDLRP  216 (313)
Q Consensus       154 ~~~~~~~~~~~~-~~~i~vgD~~~Di~~a~~~G~-~~i~v~~~~~~~--~~~~~s~~ii~~l~e~~~  216 (313)
                      ++.+++++|+++ ++|++|||+.+|+.+|+.+|+ .++.+.......  .....++.+++++.++..
T Consensus       210 ~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~  276 (282)
T 3nuq_A          210 FEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPH  276 (282)
T ss_dssp             HHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGG
T ss_pred             HHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHH
Confidence            999999999999 999999999999999999999 566666643222  113467899999988753

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.91  E-value=1.4e-24  Score=177.39  Aligned_cols=191  Identities=18%  Similarity=0.234  Sum_probs=134.9

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL   87 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (313)
                      +|+|+||+||||+|+...+.. +.......+..... ..+....+ .....+..++..++ .  . .....+.+    .+
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~--~-~~~~~~~~----~~   70 (201)
T 2w43_A            1 MIILAFDIFGTVLDTSTVIQE-FRNKQLEYTWLLTIMGKYVEFEE-ITKITLRYILKVRG-E--E-SKFDEELN----KW   70 (201)
T ss_dssp             CCEEEECCBTTTEEGGGSCHH-HHHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHHTT-C--G-GGHHHHHH----HH
T ss_pred             CcEEEEeCCCceecchhHHHH-HHHHHHHHHHHHHHccCcccHHH-HHHHHHHHHHHHhC-C--h-HHHHHHHH----hh
Confidence            479999999999999765443 22222222100000 00000000 01223344444443 1  1 11122222    23


Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      ....++||+.+ |+.|++. ++++++|+++...++..+ +++++..+|+.+++++++...||+|+.+..+++++|  |++
T Consensus        71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~  145 (201)
T 2w43_A           71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE  145 (201)
T ss_dssp             HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred             cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence            35788999999 9999999 999999999988888888 889999999999999999999999999999999999  999


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCCCCCcc-ccccccceeecccccc
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL  214 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~-~~~~~s~~ii~~l~e~  214 (313)
                      |++|||+.+|+.+|+++|+.++++.++.... .....++.+++++.++
T Consensus       146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  193 (201)
T 2w43_A          146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKEL  193 (201)
T ss_dssp             CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred             EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHH
Confidence            9999999999999999999999998843322 2233578888888765

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.91  E-value=1e-22  Score=172.35  Aligned_cols=199  Identities=21%  Similarity=0.296  Sum_probs=141.9

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC---------hhhhhhhcCC--C----HHHHHHHHHHHhCCCCCH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD---------GREKHKIVGK--T----PLEEAAIIVEDYGLPCAK   72 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~g~--~----~~~~~~~~~~~~~~~~~~   72 (313)
                      |+|+|+||+||||+|+...+..++.. +...+....         ........+.  .    ..+.+..++..++...+.
T Consensus         1 M~k~viFDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (253)
T 1qq5_A            1 MIKAVVFDAYGTLFDVQSVADATERA-YPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDE   79 (253)
T ss_dssp             CCCEEEECTBTTTBCTTTTHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCH
T ss_pred             CCcEEEEeCCCCCCccHhhHHHHHHH-HhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCCCCH
Confidence            46899999999999998765544331 111100000         0000111111  0    122334445555544332


Q ss_pred             HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChH
Q 021360           73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD  152 (313)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~  152 (313)
                      ..     ...+...+....++|++.++|+.|+  |++++++||++...+...+ +++++..+|+.+++++++..+||+++
T Consensus        80 ~~-----~~~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~  151 (253)
T 1qq5_A           80 SF-----LADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPD  151 (253)
T ss_dssp             HH-----HHHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHH
T ss_pred             HH-----HHHHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccEEEEccccCCCCCCHH
Confidence            21     1223334456789999999999999  8999999999999888888 78899999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC-----------------------CCC-ccccccccceee
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS-----------------------LPK-QTHRYTAADEVI  208 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~-----------------------~~~-~~~~~~~s~~ii  208 (313)
                      .++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++.                       +.. .......++.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (253)
T 1qq5_A          152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV  231 (253)
T ss_dssp             HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred             HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence            99999999999999999999999999999999999999987                       211 111234588888


Q ss_pred             ccccccC
Q 021360          209 NSLLDLR  215 (313)
Q Consensus       209 ~~l~e~~  215 (313)
                      .++.++.
T Consensus       232 ~~~~el~  238 (253)
T 1qq5_A          232 PALGDLP  238 (253)
T ss_dssp             SSGGGHH
T ss_pred             CCHHHHH
Confidence            8888763

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.91  E-value=2.3e-23  Score=173.69  Aligned_cols=178  Identities=20%  Similarity=0.186  Sum_probs=138.4

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh----------cC-CCHHHHHHHHHHHhCCCCCHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI----------VG-KTPLEEAAIIVEDYGLPCAKHEFV   76 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~g-~~~~~~~~~~~~~~~~~~~~~~~~   76 (313)
                      ++|+|+||+||||+++..   ..+.+.++++|..........+          .| ....+....+.+.++...+.+.+.
T Consensus        27 ~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  103 (229)
T 4dcc_A           27 GIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQID  103 (229)
T ss_dssp             CCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHHHHH
T ss_pred             CCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence            579999999999999864   3445667777776433332221          12 245556666667777665555443


Q ss_pred             HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHH-----hhcCCccccceEEecCCCCCCCCCh
Q 021360           77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTGKPSP  151 (313)
Q Consensus        77 ~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~-----~~~~~~~~f~~v~~~~~~~~~kp~~  151 (313)
                      ..+    ...  ...++|++.++|+.|++. ++++++||++...+...+.     +.+++..+|+.++++++++..||+|
T Consensus       104 ~~~----~~~--~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~  176 (229)
T 4dcc_A          104 AAW----NSF--LVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEP  176 (229)
T ss_dssp             HHH----HTT--BCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCH
T ss_pred             HHH----HHH--HHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCH
Confidence            322    222  234779999999999998 9999999999888764441     4578888999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      +.++.+++++|++|++|++|||+.+|+.+|+++|+.+++++.+.
T Consensus       177 ~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~  220 (229)
T 4dcc_A          177 EIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE  220 (229)
T ss_dssp             HHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             HHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence            99999999999999999999999999999999999999998843

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.91  E-value=1.2e-24  Score=180.52  Aligned_cols=196  Identities=17%  Similarity=0.214  Sum_probs=136.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh-h---cCCCH--HH------HHHHHHHHhCCCCCHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I---VGKTP--LE------EAAIIVEDYGLPCAKHEF   75 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~---~g~~~--~~------~~~~~~~~~~~~~~~~~~   75 (313)
                      ++|+|+||+||||+|+...+..++.++++++|.+.+...... +   .|...  ..      .+..++..++.... ++.
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~   80 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYPS-ERL   80 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCCC-HHH
T ss_pred             CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCCc-HHH
Confidence            578999999999999988888889999999998876544322 1   22211  00      03556666666542 233


Q ss_pred             HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHH
Q 021360           76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL  155 (313)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~  155 (313)
                      ...+.+.+. ......++||+.++|+.|++.|++++++||++.. +...+ +++|+..+|+.++++++++..||+|+.+.
T Consensus        81 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~  157 (220)
T 2zg6_A           81 VKELKEADI-RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFG  157 (220)
T ss_dssp             HHHHHHTTT-TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHH-HHHTCGGGCSEEC-----------CCHHH
T ss_pred             HHHHHHHhh-cccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence            333322111 1134678999999999999999999999999774 66667 78899999999999999999999999999


Q ss_pred             HHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          156 EAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       156 ~~~~~~~~~~~~~i~vgD~~~-Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      .+++++|++|   ++|||+.+ |+.+|+++|+.++++.+..... .   .+.+++++.++
T Consensus       158 ~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~-~---~~~~i~~l~el  210 (220)
T 2zg6_A          158 FALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYP-D---VRDRVKNLREA  210 (220)
T ss_dssp             HHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCT-T---CCSCBSSHHHH
T ss_pred             HHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCC-C---cceEECCHHHH
Confidence            9999999998   99999998 9999999999999998642211 1   14556666654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.90  E-value=5.3e-24  Score=174.29  Aligned_cols=178  Identities=15%  Similarity=0.151  Sum_probs=129.4

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcC-----------CCHHHHHHHHHHHhCCCCCHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-----------KTPLEEAAIIVEDYGLPCAKHEF   75 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~   75 (313)
                      +++|+|+||+||||+|+..   ..+...+++++..........+.+           ....+....+...++...+...+
T Consensus         5 ~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T 2b0c_A            5 EAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQF   81 (206)
T ss_dssp             -CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHH
T ss_pred             ccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence            4789999999999999872   122233444443322222222211           23334444455555544333322


Q ss_pred             HHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhh-cCCccccceEEecCCCCCCCCChHHH
Q 021360           76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIF  154 (313)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~~~~~~f~~v~~~~~~~~~kp~~~~~  154 (313)
                      .    +.+..  ....++|++.++|+.|++.|++++++||++...+...+ +. +++..+|+.++++++.+..||+|+.+
T Consensus        82 ~----~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~  154 (206)
T 2b0c_A           82 S----HGWQA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIY  154 (206)
T ss_dssp             H----HHHHT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHH
T ss_pred             H----HHHHH--HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHHH
Confidence            2    11111  13578999999999999999999999999887765555 44 67888899999999988999999999


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ..+++++|+++++|++|||+.+|+.+|+.+|+.+++++.+
T Consensus       155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  194 (206)
T 2b0c_A          155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK  194 (206)
T ss_dssp             HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence            9999999999999999999999999999999999999874

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.90  E-value=1.2e-23  Score=175.91  Aligned_cols=202  Identities=15%  Similarity=0.144  Sum_probs=138.6

Q ss_pred             CCccc-ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCCh------hhhhhhcCCC-HHHHHHHHHHHhCCCCCH
Q 021360            1 MAQPL-KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG------REKHKIVGKT-PLEEAAIIVEDYGLPCAK   72 (313)
Q Consensus         1 M~~~~-~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~g~~-~~~~~~~~~~~~~~~~~~   72 (313)
                      |..+| +.++|+|+||+||||+|+...+..++.++++++|.....      .......|.. ....+..+.......   
T Consensus         2 m~~~m~~~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---   78 (231)
T 2p11_A            2 MQATTATPHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD---   78 (231)
T ss_dssp             -------CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---
T ss_pred             CccccCCCCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---
Confidence            44443 246789999999999999999999999999998865432      1222234433 222222222222111   


Q ss_pred             HHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChH
Q 021360           73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD  152 (313)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~  152 (313)
                       .....+.+.+........++||+.++|+.|++.| +++++||++...+...+ +++|+..+|+.++..   .  ++++.
T Consensus        79 -~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~---~--~~K~~  150 (231)
T 2p11_A           79 -TRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI---Y--IHKEL  150 (231)
T ss_dssp             -TGGGGGHHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE---E--SSGGG
T ss_pred             -hHHHHHHHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe---c--CChHH
Confidence             1112223333333455789999999999999999 99999999999888888 788998888765542   2  23356


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHh---hHHHHHHcCCeEEEeCCCCC--cc-cc-cc-ccceeeccccccC
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVI---GVVAGKAAGMEVVAVPSLPK--QT-HR-YT-AADEVINSLLDLR  215 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~---Di~~a~~~G~~~i~v~~~~~--~~-~~-~~-~s~~ii~~l~e~~  215 (313)
                      .++.+++  +++|++|++|||+.+   |+.+|+++|++++++.++..  .. .. .. .++.++.++.++.
T Consensus       151 ~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~  219 (231)
T 2p11_A          151 MLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLV  219 (231)
T ss_dssp             CHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGG
T ss_pred             HHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHH
Confidence            7776665  789999999999999   99999999999999987532  11 11 11 3788999988864

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.88  E-value=1.7e-22  Score=163.63  Aligned_cols=127  Identities=19%  Similarity=0.269  Sum_probs=110.6

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHhhcCCccccceEEecCCC----CCCCCChHHHHHHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKR  160 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~~~~~f~~v~~~~~~----~~~kp~~~~~~~~~~~  160 (313)
                      ....++||+.++|+.|++.|++++++||++.   ..+...+ +.+|+..+|+.++++++.    ...||+|+.|+.++++
T Consensus        31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~  109 (189)
T 3ib6_A           31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA  109 (189)
T ss_dssp             TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred             CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence            4568999999999999999999999999886   7777777 889999999999999886    7889999999999999


Q ss_pred             cCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcc--cc--ccccceeec--cccccC
Q 021360          161 LNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQT--HR--YTAADEVIN--SLLDLR  215 (313)
Q Consensus       161 ~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~--~~--~~~s~~ii~--~l~e~~  215 (313)
                      +|++|++|++|||+ .+|+.+|+++|+.++++.++....  ..  ...++.+++  ++.++.
T Consensus       110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~  171 (189)
T 3ib6_A          110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVP  171 (189)
T ss_dssp             HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHH
T ss_pred             cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHH
Confidence            99999999999999 699999999999999998854311  11  226888888  887754

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.88  E-value=9.5e-23  Score=168.17  Aligned_cols=186  Identities=15%  Similarity=0.146  Sum_probs=128.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh--hhhcC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      .++|+|+||+||||++++..     ..+.+.++........  +...+ ....+.+........ ....        +.+
T Consensus         2 ~~~k~vifDlDGTL~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~   67 (217)
T 3m1y_A            2 SLQKLAVFDFDSTLVNAETI-----ESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLK-NMPL--------KLA   67 (217)
T ss_dssp             CCCEEEEEECBTTTBSSCHH-----HHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTT-TCBH--------HHH
T ss_pred             CCCcEEEEeCCCCCCCchhH-----HHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhc-CCCH--------HHH
Confidence            46899999999999998643     2333344432111111  00011 122222222222221 1111        112


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEec----------CCCCCCCCChHH
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----------DEVRTGKPSPDI  153 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~----------~~~~~~kp~~~~  153 (313)
                      .......+++|++.++|+.|++.|++++++|+++...++..+ +.+++..+|+.++..          .+...+||+++.
T Consensus        68 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~  146 (217)
T 3m1y_A           68 KEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM  146 (217)
T ss_dssp             HHHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred             HHHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence            223345789999999999999999999999999999988888 888999999887633          344578999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      ++.+++++|+++++|++|||+.+|+.+|+.+|+.+++ +.   .+.....++.++.+.
T Consensus       147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~~  200 (217)
T 3m1y_A          147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINEP  200 (217)
T ss_dssp             HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECSS
T ss_pred             HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeeccc
Confidence            9999999999999999999999999999999999877 33   233344678887643

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.87  E-value=6.3e-22  Score=161.06  Aligned_cols=102  Identities=21%  Similarity=0.251  Sum_probs=90.6

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC-C
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-S  166 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~-~  166 (313)
                      ....++||+.++|+.|++.|++++++|+.+...+...+    +  .+|+.+++++++..+||+|+.+..+++++++.+ +
T Consensus        33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~----~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~  106 (196)
T 2oda_A           33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA----A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE  106 (196)
T ss_dssp             GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH----T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred             ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc----C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence            34578999999999999999999999999887764333    2  467999999999999999999999999999976 8


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      +|+||||+.+|+.+|+++|+.++++.++.
T Consensus       107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~  135 (196)
T 2oda_A          107 GCVLISGDPRLLQSGLNAGLWTIGLASCG  135 (196)
T ss_dssp             TCEEEESCHHHHHHHHHHTCEEEEESSSS
T ss_pred             cEEEEeCCHHHHHHHHHCCCEEEEEccCC
Confidence            99999999999999999999999998854

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.87  E-value=4.9e-23  Score=173.13  Aligned_cols=202  Identities=19%  Similarity=0.220  Sum_probs=138.7

Q ss_pred             CccEEEEecCCccccChHHHHHH--HHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEV--LKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSM   82 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~   82 (313)
                      ++|+|+||+||||+++...+...  +.+.+++.|+...  ......|.........+. ..+++.+.....   ......
T Consensus         2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~--~~t~~~g~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~   78 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLV--LLTNYPSQTGQDLANRFA-TAGVDVPDSVFYTSAMATADF   78 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEE--EEESCCSCCHHHHHHHHH-HTTCCCCGGGEEEHHHHHHHH
T ss_pred             CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEE--EEECCCCCCHHHHHHHHH-HcCCCCCHHHeEcHHHHHHHH
Confidence            57999999999999997655555  4455667776643  222233556555554444 355543322210   111122


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEE---------------------------------EEeCCchHHHHHHHHhhc
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMA---------------------------------LASNSHRATIESKISYQH  129 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~---------------------------------i~s~~~~~~~~~~l~~~~  129 (313)
                      .........+.|++.++++.+++.|++++                                 ++|+.+ ......+ +.+
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~-~~~  156 (250)
T 2c4n_A           79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY-PAC  156 (250)
T ss_dssp             HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC-BCH
T ss_pred             HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee-ecc
Confidence            22222345678999999999999999888                                 777766 3332222 333


Q ss_pred             C-CccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcccc-c---cc
Q 021360          130 G-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-Y---TA  203 (313)
Q Consensus       130 ~-~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~---~~  203 (313)
                      + +..+|+.+.+.+....+||++..++.+++++|+++++|++|||+ .||+.|++.+|+.++++.++...... .   ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~  236 (250)
T 2c4n_A          157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR  236 (250)
T ss_dssp             HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSC
T ss_pred             hHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCC
Confidence            3 44455666666667789999999999999999999999999999 69999999999999999886543222 1   36


Q ss_pred             cceeecccccc
Q 021360          204 ADEVINSLLDL  214 (313)
Q Consensus       204 s~~ii~~l~e~  214 (313)
                      ++.+++++.++
T Consensus       237 ~~~v~~~~~el  247 (250)
T 2c4n_A          237 PSWIYPSVAEI  247 (250)
T ss_dssp             CSEEESSGGGC
T ss_pred             CCEEECCHHHh
Confidence            88888888775

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.87  E-value=6e-22  Score=158.87  Aligned_cols=124  Identities=21%  Similarity=0.276  Sum_probs=103.0

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEE-----ecCCCCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-----GSDEVRTGK  148 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~-----~~~~~~~~k  148 (313)
                      ..+++||+.++|+.|++.|++++++||++.               ..+...+ +.+|  .+|+.++     .++++..+|
T Consensus        25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~K  101 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACRK  101 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSST
T ss_pred             HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCCC
Confidence            467899999999999999999999999986               4556566 6677  3345554     256778899


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccccC
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR  215 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e~~  215 (313)
                      |+|+.++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++......    ...++.+++++.++.
T Consensus       102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~  172 (179)
T 3l8h_A          102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVA  172 (179)
T ss_dssp             TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHH
Confidence            9999999999999999999999999999999999999999999986543322    145799999998763

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.86  E-value=6e-21  Score=158.53  Aligned_cols=192  Identities=14%  Similarity=0.157  Sum_probs=128.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      +++|+|+||+||||+|+..     +..+++.+|.... ........+.  ...+.+.........  ..+    .+.+.+
T Consensus        12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~   80 (225)
T 1nnl_A           12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SRE----QVQRLI   80 (225)
T ss_dssp             HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHH----HHHHHH
T ss_pred             hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcC--CHH----HHHHHH
Confidence            4689999999999999964     3466777886543 2222233332  222333222222211  111    122222


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc--ccceEE--------ecCCCC----CCCC
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SFSVIV--------GSDEVR----TGKP  149 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~--~f~~v~--------~~~~~~----~~kp  149 (313)
                      ..  ...+++||+.++|+.|++.|++++++||++...++..+ +++|+..  +|+.++        ++.+..    ..+|
T Consensus        81 ~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (225)
T 1nnl_A           81 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG  157 (225)
T ss_dssp             HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred             Hh--ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCc
Confidence            11  24689999999999999999999999999999988888 8889873  666543        333332    1357


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR  215 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~  215 (313)
                      +|+.++.+++++|+  ++|++|||+.+|+.+|+++|+ ++.+............++.+++++.++.
T Consensus       158 Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~  220 (225)
T 1nnl_A          158 KGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELL  220 (225)
T ss_dssp             HHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred             hHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHH
Confidence            88999999999988  799999999999999999999 7777543222222335788898888763

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.85  E-value=1.5e-21  Score=182.27  Aligned_cols=179  Identities=18%  Similarity=0.190  Sum_probs=122.1

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhc------------CC-CHHHHHHHHHH-------HhC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GK-TPLEEAAIIVE-------DYG   67 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------g~-~~~~~~~~~~~-------~~~   67 (313)
                      ++|+|+||+||||+++...  ..+.......+............            +. ...+....+..       ...
T Consensus         2 ~~k~viFD~DGTL~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (555)
T 3i28_A            2 TLRAAVFDLDGVLALPAVF--GVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAK   79 (555)
T ss_dssp             --CEEEECTBTTTEESCTH--HHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEecCCeeecchhH--HHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccC
Confidence            5899999999999976532  34555566666554322211110            11 11111111111       111


Q ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCC------chHHHHHHHHhhcCCccccceEEec
Q 021360           68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS------HRATIESKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~------~~~~~~~~l~~~~~~~~~f~~v~~~  141 (313)
                      .......   ...+.+........++||+.++|+.|+++|++++++||+      ....+...+   .++..+|+.++++
T Consensus        80 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~  153 (555)
T 3i28_A           80 VCLPKNF---SIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIES  153 (555)
T ss_dssp             CCCCTTC---CHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEH
T ss_pred             CCCCccc---cHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEec
Confidence            1100000   022333333455789999999999999999999999998      333332222   3778899999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++++..||+|+.|..+++++|++|++|++|||+.+|+.+|+++|+.++++...
T Consensus       154 ~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~  206 (555)
T 3i28_A          154 CQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT  206 (555)
T ss_dssp             HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred             cccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence            99999999999999999999999999999999999999999999999999873

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.85  E-value=3.8e-22  Score=170.01  Aligned_cols=207  Identities=14%  Similarity=0.132  Sum_probs=135.9

Q ss_pred             cCccEEEEecCCccccChHHHHHHHH--HHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH-------H
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV-------N   77 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~   77 (313)
                      .++|+|+||+||||+++...+..+..  ..+++.|..+.  ......+.........+...++++.+.+.+.       .
T Consensus         3 ~~~k~v~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~--~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~   80 (264)
T 1yv9_A            3 LDYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFL--FVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLATID   80 (264)
T ss_dssp             CSCCEEEECCBTTTEETTEECHHHHHHHHHHHHTTCCEE--EEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHHHH
T ss_pred             ccCCEEEEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEE--EEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHHHH
Confidence            46899999999999998665543332  33445555431  1111222233333333333355543221110       0


Q ss_pred             -----------------HHHHHHHhh---------------hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHH--HHH
Q 021360           78 -----------------EVYSMFSDH---------------LCKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IES  123 (313)
Q Consensus        78 -----------------~~~~~~~~~---------------~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~--~~~  123 (313)
                                       .+.+.+...               .....++|++.++++.|+ .|+++ ++||.+...  ...
T Consensus        81 ~~~~~~~~~~~~~~g~~~l~~~l~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~  158 (264)
T 1yv9_A           81 YMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERG  158 (264)
T ss_dssp             HHHHHCCCSEEEEESCHHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTE
T ss_pred             HHHhhCCCCEEEEEeCHHHHHHHHHcCCcccCCCCCEEEEECCCCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCC
Confidence                             111112211               123567899999999997 88887 888887643  111


Q ss_pred             HHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcccc-c
Q 021360          124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-Y  201 (313)
Q Consensus       124 ~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~  201 (313)
                      .+....++..+|+.++++++...+||+|+.|+.+++++|++|++|++|||+ .+|+.+|+++|+.++++.++...... .
T Consensus       159 ~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~  238 (264)
T 1yv9_A          159 LLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVP  238 (264)
T ss_dssp             EEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTT
T ss_pred             cccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHH
Confidence            111333466677888888888889999999999999999999999999999 59999999999999999986543322 1


Q ss_pred             ---cccceeeccccccCcc
Q 021360          202 ---TAADEVINSLLDLRPE  217 (313)
Q Consensus       202 ---~~s~~ii~~l~e~~~~  217 (313)
                         ..++.+++++.++..+
T Consensus       239 ~~~~~~d~v~~~l~el~~~  257 (264)
T 1yv9_A          239 TLPTPPTYVVDSLDEWTFE  257 (264)
T ss_dssp             TCSSCCSEEESSGGGCCTT
T ss_pred             hcCCCCCEEEecHHHHhhc
Confidence               1589999999887543

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.84  E-value=5.5e-21  Score=157.47  Aligned_cols=124  Identities=23%  Similarity=0.280  Sum_probs=102.9

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCc---------------hHHHHHHHHhhcCCccccceEEe------------c
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG------------S  141 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~---------------~~~~~~~l~~~~~~~~~f~~v~~------------~  141 (313)
                      ...++||+.++|+.|++.|++++++||++               ...+...+ +.+|+.  |+.++.            +
T Consensus        48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~  124 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFR  124 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred             cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccC
Confidence            45789999999999999999999999998               36677677 777876  666553            2


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEeCCCCCcccc-ccccceeeccccccC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLR  215 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~~-~~~s~~ii~~l~e~~  215 (313)
                      +++..+||+|+.+..+++++++++++|++|||+.+|+.+|+++|+.+ +++.++...... ...++.+++++.++.
T Consensus       125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~  200 (211)
T 2gmw_A          125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP  200 (211)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHH
T ss_pred             ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHH
Confidence            34668999999999999999999999999999999999999999999 999876433221 235888999888763

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.84  E-value=6.3e-20  Score=152.95  Aligned_cols=181  Identities=17%  Similarity=0.084  Sum_probs=121.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh---------hhhcCC-CHHHHHHHHHHHhCCCCCHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK---------HKIVGK-TPLEEAAIIVEDYGLPCAKHEFV   76 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~   76 (313)
                      +++++|+||+||||+|++...  .+...+...+........         ....|. ............+ ...+.+++.
T Consensus         2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~   78 (232)
T 3fvv_A            2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLL-AAHSPVELA   78 (232)
T ss_dssp             CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH-HTSCHHHHH
T ss_pred             CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHh-cCCCHHHHH
Confidence            356899999999999997653  344444444432011111         011122 2222222222222 123344444


Q ss_pred             HHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC----------CCCC
Q 021360           77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRT  146 (313)
Q Consensus        77 ~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~----------~~~~  146 (313)
                      ....+.+..... ..++||+.++|+.|++.|++++++|+++...++..+ +.+|+...|...+...          ....
T Consensus        79 ~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~  156 (232)
T 3fvv_A           79 AWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSF  156 (232)
T ss_dssp             HHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSS
T ss_pred             HHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCc
Confidence            444444443332 267999999999999999999999999999998888 8889865554322111          1224


Q ss_pred             CCCChHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCeEEEeC
Q 021360          147 GKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~---~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~  192 (313)
                      ++++++.++.+++++|   +++++|++|||+.+|+.+++.+|+.+++.+
T Consensus       157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~  205 (232)
T 3fvv_A          157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANP  205 (232)
T ss_dssp             THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESC
T ss_pred             chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECc
Confidence            5667888999999999   999999999999999999999999876643

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.83  E-value=1.8e-21  Score=165.01  Aligned_cols=204  Identities=16%  Similarity=0.168  Sum_probs=134.2

Q ss_pred             cccCccEEEEecCCccccChHHHHHHHH--HHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH---HH
Q 021360            5 LKKLMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EV   79 (313)
Q Consensus         5 ~~~~~k~vifDlDGTL~d~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~   79 (313)
                      +++++|+|+||+||||+++...+...+.  +.+++.|+.+  .......+....... ..+..++++.+.+.+..   ..
T Consensus         3 ~~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~--~~~t~~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~   79 (259)
T 2ho4_A            3 ARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMV--RFVTNTTKETKKDLL-ERLKKLEFEISEDEIFTSLTAA   79 (259)
T ss_dssp             ---CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEE--EEEECCSSCCHHHHH-HHHHHTTCCCCGGGEEEHHHHH
T ss_pred             chhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeE--EEEeCCCCcCHHHHH-HHHHHcCCCccHHHeecHHHHH
Confidence            3457899999999999998766544332  3445556543  111222234444433 34456676644322110   00


Q ss_pred             HHHHHhh---------------h----------------ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhh
Q 021360           80 YSMFSDH---------------L----------------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ  128 (313)
Q Consensus        80 ~~~~~~~---------------~----------------~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~  128 (313)
                      .......               +                ....++|++.++++.++ .|+++ ++|+.+.......+ ..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~~  156 (259)
T 2ho4_A           80 RNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-LA  156 (259)
T ss_dssp             HHHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-EE
T ss_pred             HHHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-cc
Confidence            1111110               0                01136789999999999 88998 88988766554444 56


Q ss_pred             cCCccccc---eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCC-cccc---
Q 021360          129 HGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR---  200 (313)
Q Consensus       129 ~~~~~~f~---~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~-~~~~---  200 (313)
                      .++..+|+   .+++++++..+||+|+.++.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.. ....   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~  236 (259)
T 2ho4_A          157 LGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKI  236 (259)
T ss_dssp             ECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGS
T ss_pred             cCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCccccccc
Confidence            77777776   556677777899999999999999999999999999999 999999999999999988632 2111   


Q ss_pred             ccccceeecccccc
Q 021360          201 YTAADEVINSLLDL  214 (313)
Q Consensus       201 ~~~s~~ii~~l~e~  214 (313)
                      ...++.+++++.++
T Consensus       237 ~~~~~~~~~~l~~l  250 (259)
T 2ho4_A          237 NPPPYLTCESFPHA  250 (259)
T ss_dssp             SSCCSEEESCHHHH
T ss_pred             CCCCCEEECCHHHH
Confidence            23578888888775

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.82  E-value=1.3e-20  Score=164.44  Aligned_cols=170  Identities=13%  Similarity=0.137  Sum_probs=120.5

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh--hhhcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      .+.+|+|+||+||||++++..     ..+.+.+|........  ....|. ...+.+........ ... .+       .
T Consensus       105 ~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~-~~~-~~-------~  170 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLK-GTP-KA-------V  170 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT-TCB-HH-------H
T ss_pred             CCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCC-HH-------H
Confidence            356899999999999998753     3344445543211111  111111 22222222222211 111 11       1


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEe----------cCCCCCCCCChH
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPD  152 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~----------~~~~~~~kp~~~  152 (313)
                      +........++||+.++|+.|++.|++++++|++....++..+ +++|+..+|+.++.          ......+||+++
T Consensus       171 i~~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~  249 (317)
T 4eze_A          171 LNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQ  249 (317)
T ss_dssp             HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred             HHHHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHH
Confidence            1222245789999999999999999999999999999999888 88999888886654          233446789999


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      .+..+++++|+++++|++|||+.+|+.+|+.+|+.+++
T Consensus       250 ~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          250 TLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            99999999999999999999999999999999998777

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.82  E-value=4.2e-20  Score=151.26  Aligned_cols=159  Identities=18%  Similarity=0.168  Sum_probs=116.2

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCC------ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW------DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      +|+|+||+||||+|      ..+.++++++|.+.      .........+.    ....+. ..+.  +.+.+    .+ 
T Consensus         2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~--~~~~~----~~-   63 (206)
T 1rku_A            2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQ----RLRILD-EHGL--KLGDI----QE-   63 (206)
T ss_dssp             CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHH----HHHHHH-HTTC--CHHHH----HH-
T ss_pred             CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHH----HHHHHH-HCCC--CHHHH----HH-
Confidence            68999999999999      35677778887652      11111111111    111111 1122  12211    11 


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCC--CC-CCChHHHHHHH
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVR--TG-KPSPDIFLEAA  158 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~--~~-kp~~~~~~~~~  158 (313)
                         ......++||+.++|+.|++. ++++++|+++...++..+ +++|+..+| +.++++++..  .. +|+|+.+..++
T Consensus        64 ---~~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l  138 (206)
T 1rku_A           64 ---VIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV  138 (206)
T ss_dssp             ---HHTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred             ---HHHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHH
Confidence               234678999999999999999 999999999999888888 889999989 5666665543  11 48889999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ++++.++++|++|||+.+|+.+|+.+|+.+++
T Consensus       139 ~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF  170 (206)
T ss_dssp             HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE
T ss_pred             HHHHhcCCEEEEEeCChhhHHHHHhcCccEEE
Confidence            99999999999999999999999999998764

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.82  E-value=4.1e-20  Score=151.33  Aligned_cols=190  Identities=17%  Similarity=0.209  Sum_probs=120.8

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh--hhhcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      ..++|+|+||+||||+|+...     ..+.+.++........  +...+. ...+.+....... ......    .    
T Consensus         2 ~~~~k~i~fDlDGTL~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~----   67 (211)
T 1l7m_A            2 EKKKKLILFDFDSTLVNNETI-----DEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDLPIE----K----   67 (211)
T ss_dssp             -CCCEEEEEECCCCCBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTCBHH----H----
T ss_pred             CcCCcEEEEeCCCCCCCccHH-----HHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHh-cCCCHH----H----
Confidence            346899999999999999632     3445555543211111  111121 1111111111111 001111    1    


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC----------CCCCCCChH
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPD  152 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~----------~~~~kp~~~  152 (313)
                      +...+....+.|++.++++.+++.|++++++|+++...+...+ +.+++..+|...+...+          ...++++++
T Consensus        68 ~~~~~~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~  146 (211)
T 1l7m_A           68 VEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGE  146 (211)
T ss_dssp             HHHHHHTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHH
T ss_pred             HHHHHHhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHH
Confidence            1112234567899999999999999999999998887777666 77788666654332211          123456789


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc--cccc
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDL  214 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~--l~e~  214 (313)
                      .+..+++++|+++++|++|||+.+|+.+++.+|+.+.+. .   .+.....++.++.+  +.++
T Consensus       147 ~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~---~~~~~~~a~~v~~~~~~~~l  206 (211)
T 1l7m_A          147 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-A---KPILKEKADICIEKRDLREI  206 (211)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-C---CHHHHTTCSEEECSSCGGGG
T ss_pred             HHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-C---CHHHHhhcceeecchhHHHH
Confidence            999999999999999999999999999999999976543 2   12223457888877  6654

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.81  E-value=5.5e-20  Score=140.44  Aligned_cols=100  Identities=20%  Similarity=0.220  Sum_probs=93.1

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 021360           93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE  172 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vg  172 (313)
                      +|++.++|+.|++.|++++++||++...+...+ +.+++..+|+.++++++....||+++.++.++++++++|++|++||
T Consensus        20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vg   98 (137)
T 2pr7_A           20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVD   98 (137)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence            457889999999999999999999988887777 7788999999999999888999999999999999999999999999


Q ss_pred             cCHhhHHHHHHcCCeEEEeCC
Q 021360          173 DSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       173 D~~~Di~~a~~~G~~~i~v~~  193 (313)
                      |+.+|+.+|+++|+.++++.+
T Consensus        99 D~~~di~~a~~~G~~~i~~~~  119 (137)
T 2pr7_A           99 DSILNVRGAVEAGLVGVYYQQ  119 (137)
T ss_dssp             SCHHHHHHHHHHTCEEEECSC
T ss_pred             CCHHHHHHHHHCCCEEEEeCC
Confidence            999999999999999999877

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.80  E-value=1.1e-19  Score=152.12  Aligned_cols=201  Identities=15%  Similarity=0.153  Sum_probs=128.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhh-cC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      .|+++|+||+||||++++...     .+++.++. ...... ... .+ .+..+.+..++.....  .   ..+.+.+.+
T Consensus         4 ~~~k~viFD~DGTL~d~ds~~-----~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~---~~~~~~~~~   72 (236)
T 2fea_A            4 TRKPFIICDFDGTITMNDNII-----NIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPS--S---LKEEITSFV   72 (236)
T ss_dssp             CCCEEEEECCTTTTBSSCHHH-----HHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBG--G---GHHHHHHHH
T ss_pred             CCCcEEEEeCCCCCCccchHH-----HHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCC--C---hHHHHHHHH
Confidence            467899999999999764321     12222232 111111 112 22 2344444444433211  1   112222211


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCC--------CCCChHH-H
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-F  154 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~--------~kp~~~~-~  154 (313)
                         .....++||+.++|+.|++.|++++++||++...++..+ +  ++..+ +.+++++....        .||+|.. +
T Consensus        73 ---~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~  145 (236)
T 2fea_A           73 ---LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCS  145 (236)
T ss_dssp             ---HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCC
T ss_pred             ---hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccc
Confidence               245789999999999999999999999999998888777 4  66555 88888776543        7888883 5


Q ss_pred             H-------HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-cc-ccceeeccccccCccccCCCCcc
Q 021360          155 L-------EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YT-AADEVINSLLDLRPEKWGLPPFQ  225 (313)
Q Consensus       155 ~-------~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-~~-~s~~ii~~l~e~~~~~~~~~~~~  225 (313)
                      .       .+++++++++++|++|||+.+|+.+|+.+|+.++.  .+. .... .. .++.++.++.++........+.+
T Consensus       146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~  222 (236)
T 2fea_A          146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEIRKEIENVKEVQ  222 (236)
T ss_dssp             SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHHHHHHHTSHHHH
T ss_pred             cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHHHHHHHHhHHHH
Confidence            4       78889999999999999999999999999998752  111 1111 11 26778888877643333333334


Q ss_pred             ccc
Q 021360          226 DWI  228 (313)
Q Consensus       226 ~~~  228 (313)
                      +|+
T Consensus       223 ~~~  225 (236)
T 2fea_A          223 EWL  225 (236)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            444

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.79  E-value=3.7e-19  Score=146.23  Aligned_cols=124  Identities=15%  Similarity=0.137  Sum_probs=91.6

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc--cccc--eEEecCC----CCCCCCChHHHHHH-HH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFS--VIVGSDE----VRTGKPSPDIFLEA-AK  159 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~--~~f~--~v~~~~~----~~~~kp~~~~~~~~-~~  159 (313)
                      ...++|++.++++.+++.|++++++|+++...++..+ +.+++.  .+|.  .++..+.    +...+|++..+... .+
T Consensus        80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  158 (219)
T 3kd3_A           80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK  158 (219)
T ss_dssp             TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred             cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence            3458899999999999999999999999999888888 778884  3443  2232332    24566666544444 45


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC--Cccccccccceeecccccc
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP--KQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~--~~~~~~~~s~~ii~~l~e~  214 (313)
                      .+|+++++|++|||+.+|+.|+ ++|+.++.+....  ........++.+++++.++
T Consensus       159 ~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el  214 (219)
T 3kd3_A          159 AKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAEL  214 (219)
T ss_dssp             HGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHH
T ss_pred             HhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHH
Confidence            5699999999999999999998 5899866665432  2222344688999988775

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.78  E-value=1.8e-18  Score=156.82  Aligned_cols=184  Identities=15%  Similarity=0.168  Sum_probs=124.6

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hh-hcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HK-IVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      +++|+|+||+||||++++..     ..+.+..|........ .. ..+. ...+.+......+. ..+.. .       +
T Consensus       183 ~~~k~viFD~DgTLi~~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~-~-------~  248 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVI-----EMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA-GLPAT-V-------I  248 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTT-TCBTH-H-------H
T ss_pred             cCCcEEEEcCcccCcCCchH-----HHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhc-CCCHH-H-------H
Confidence            57899999999999998632     3444444442211111 11 1111 22333333332221 11111 1       1


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEE-------ec---CCCCCCCCChHH
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------GS---DEVRTGKPSPDI  153 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~-------~~---~~~~~~kp~~~~  153 (313)
                      ........++||+.++|+.|++.|++++++|++...+++..+ +.+|+..+|...+       ++   .++..+||+++.
T Consensus       249 ~~~~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~  327 (415)
T 3p96_A          249 DEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATA  327 (415)
T ss_dssp             HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred             HHHHHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHH
Confidence            112234689999999999999999999999999999998888 8899977765322       22   244468999999


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      ++.+++++|+++++|++|||+.+|+.+++.+|+.+++ ..   .+.....++.++.
T Consensus       328 ~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~---~~~~~~~ad~~i~  379 (415)
T 3p96_A          328 LREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NA---KPALREVADASLS  379 (415)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHHHCSEEEC
T ss_pred             HHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CC---CHHHHHhCCEEEc
Confidence            9999999999999999999999999999999998876 32   2223334666654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.78  E-value=1e-18  Score=141.10  Aligned_cols=103  Identities=16%  Similarity=0.127  Sum_probs=91.6

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCc-hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~-~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      ....++|++.++|+.|++.|++++++|+++ ...++..+ +.+++..+|+.++..     .+|+++.+..+++++|++|+
T Consensus        65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~  138 (187)
T 2wm8_A           65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFS  138 (187)
T ss_dssp             CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGG
T ss_pred             cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChH
Confidence            356789999999999999999999999998 68888788 889999999987543     25778999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      +|++|||+.+|+.+|+++|+.++.+.++..
T Consensus       139 ~~~~igD~~~Di~~a~~aG~~~i~v~~g~~  168 (187)
T 2wm8_A          139 QMIFFDDERRNIVDVSKLGVTCIHIQNGMN  168 (187)
T ss_dssp             GEEEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred             HEEEEeCCccChHHHHHcCCEEEEECCCCC
Confidence            999999999999999999999999988543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.78  E-value=7.6e-21  Score=154.41  Aligned_cols=154  Identities=13%  Similarity=0.229  Sum_probs=115.3

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCC-CChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-   86 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   86 (313)
                      .++|+||+||||+|+...+..++.++++  |.+ .+.+.+..+.   ....+.    .. .+    +..+.+.+.+... 
T Consensus         2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~---~~~~~~----~~-~~----~~~~~~~~~~~~~~   67 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL---AREQYR----AL-RP----DLADKVASVYEAPG   67 (193)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC---HHHHHH----HH-CT----THHHHHHHHHTSTT
T ss_pred             CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh---HHHHHH----HH-hH----HHHHHHHHHHHhcC
Confidence            4789999999999999999888888876  654 4444433221   222222    22 11    1233444444443 


Q ss_pred             -hccCCCCchHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        87 -~~~~~~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                       .....++||+.++|+.|++. |++++++||++...+...+ +++|+   |+.++++              .+++++|++
T Consensus        68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~--------------~~~~~~~~~  129 (193)
T 2i7d_A           68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGP--------------QFVERIILT  129 (193)
T ss_dssp             TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCH--------------HHHTTEEEC
T ss_pred             ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCH--------------HHHHHcCCC
Confidence             23578899999999999999 9999999999888777777 66777   6766654              267889999


Q ss_pred             CCcEEEEecCHhh----HHHHH-HcCCeEEEeCCC
Q 021360          165 PSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSL  194 (313)
Q Consensus       165 ~~~~i~vgD~~~D----i~~a~-~~G~~~i~v~~~  194 (313)
                      |++|++|||+..|    +.+|+ ++|+.++++...
T Consensus       130 ~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          130 RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCG
T ss_pred             cccEEEECCchhhCcHHHhhcccccccceEEEEec
Confidence            9999999999998    99999 999999999874

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.77  E-value=8.7e-19  Score=145.00  Aligned_cols=124  Identities=21%  Similarity=0.283  Sum_probs=101.8

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEE-ec-----------
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS-----------  141 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~-~~-----------  141 (313)
                      ...++||+.++|+.|++.|++++++||++.               ..+...+ +.+|+.  |+.++ +.           
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~  130 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAI  130 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCC
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeecc
Confidence            457899999999999999999999999987               5677677 777864  45443 33           


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEeCCCCCccc-cccccceeeccccccC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTH-RYTAADEVINSLLDLR  215 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~-i~v~~~~~~~~-~~~~s~~ii~~l~e~~  215 (313)
                      +++..+||++..++.++++++++|++|++|||+.+|+.+|+++|+.+ +++.++..... ....++.++.++.++.
T Consensus       131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~  206 (218)
T 2o2x_A          131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLL  206 (218)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHH
T ss_pred             cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHH
Confidence            55678999999999999999999999999999999999999999999 99988653322 2235778888887753

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.77  E-value=3.2e-20  Score=151.19  Aligned_cols=173  Identities=14%  Similarity=0.202  Sum_probs=122.5

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   86 (313)
                      ++|+|+||+||||+|+...+..++.++++++ ...+.+.+   .+....+.+..    ..    ... ...+.+.+... 
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~----~~----~~~-~~~~~~~~~~~~   69 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQ-PFIALEDR---RGFWVSEQYGR----LR----PGL-SEKAISIWESKN   69 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHCTTS-CCCCGGGC---CSSCHHHHHHH----HS----TTH-HHHHHHHHTSTT
T ss_pred             CceEEEEeCCCCCccCcHHHHHHHHHHHhcC-CCCCHHHh---cCCcHHHHHHh----cC----HHH-HHHHHHHHHhhh
Confidence            5689999999999999999999999888776 23333332   23333333222    21    111 12223333332 


Q ss_pred             -hccCCCCchHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHhhcCCcc-ccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        87 -~~~~~~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                       .....++||+.++|+.|++. |++++++||++...+...+ +++++.. +|+                  ..+++++++
T Consensus        70 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~  130 (197)
T 1q92_A           70 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVL  130 (197)
T ss_dssp             TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEE
T ss_pred             hhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhcc
Confidence             23578999999999999999 9999999999988777677 7778776 665                  446678899


Q ss_pred             CCCcEEEEecCHhh----HHHHH-HcCCeEEEeCCCCCccccccccceeecccc
Q 021360          164 EPSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSLL  212 (313)
Q Consensus       164 ~~~~~i~vgD~~~D----i~~a~-~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~  212 (313)
                      +|++|++|||+..|    +.+|+ ++|+.++++..+............++.++.
T Consensus       131 ~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~  184 (197)
T 1q92_A          131 TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWA  184 (197)
T ss_dssp             CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTT
T ss_pred             CCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHH
Confidence            99999999999998    99999 999999999875433222111233566663

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.77  E-value=8.9e-19  Score=139.97  Aligned_cols=103  Identities=17%  Similarity=0.228  Sum_probs=88.3

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCC---------------chHHHHHHHHhhcCCccccceEEec-----CCCCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTGK  148 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~---------------~~~~~~~~l~~~~~~~~~f~~v~~~-----~~~~~~k  148 (313)
                      ...++||+.++|+.|++.|++++++||+               +...+...+ +.+++.  |+.++.+     +++...|
T Consensus        40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~K  116 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCRK  116 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSST
T ss_pred             HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCcccccccC
Confidence            4678999999999999999999999998               566677777 778886  8887644     6778899


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      |+|+.|+.++++++++|++|++|||+.+|+.+|+++|+.++++.+.
T Consensus       117 P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          117 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence            9999999999999999999999999999999999999999999874

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.76  E-value=3.6e-19  Score=158.13  Aligned_cols=194  Identities=17%  Similarity=0.188  Sum_probs=140.3

Q ss_pred             CCccccChHHHHHHHHHHHHH-cCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH------HHHhh---
Q 021360           17 DGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS------MFSDH---   86 (313)
Q Consensus        17 DGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---   86 (313)
                      |||....+ .+...+.++.+. .+++  .+......|....+....+.+.++..    ........      .....   
T Consensus       138 D~t~~~~d-~i~~~l~~~a~~~~~i~--~~~~~~~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  210 (384)
T 1qyi_A          138 DNVKVGKN-NIYAALEEFATTELHVS--DATLFSLKGALWTLAQEVYQEWYLGS----KLYEDVEKKIARTTFKTGYIYQ  210 (384)
T ss_dssp             TTCCSSHH-HHHHHHHHHHHHHTTCS--CCGGGSTTCHHHHHHHHHHHHHHHHH----HHHHHHHCSCCSCSSCCCTTTT
T ss_pred             cCCCccHH-HHHHHHHHHHHHhCCCC--HHHHHHhcCCCHHHHHHHHHHHcCCc----cCHHHHHhHHHHHHHHHHHHhh
Confidence            66665433 444566666654 4554  33345566766666666666554321    00001100      00000   


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccc--eEEecCCCC-----------CCCCChHH
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPDI  153 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~--~v~~~~~~~-----------~~kp~~~~  153 (313)
                      .....++||+.++|+.|++.|++++++||++...+...+ +++|+..+|+  .+++++++.           .+||+|+.
T Consensus       211 ~~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~  289 (384)
T 1qyi_A          211 EIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS  289 (384)
T ss_dssp             CCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHH
T ss_pred             ccCCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHHH
Confidence            124578999999999999999999999999999998888 7889999999  899888764           48999999


Q ss_pred             HHHHHHHcC--------------CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCc---c-cc-ccccceeecccccc
Q 021360          154 FLEAAKRLN--------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ---T-HR-YTAADEVINSLLDL  214 (313)
Q Consensus       154 ~~~~~~~~~--------------~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~---~-~~-~~~s~~ii~~l~e~  214 (313)
                      |..++++++              ++|++|++|||+.+|+.+|+++|+.++++..+...   . .. ...++.+++++.++
T Consensus       290 ~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL  369 (384)
T 1qyi_A          290 YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL  369 (384)
T ss_dssp             HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGH
T ss_pred             HHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHH
Confidence            999999999              89999999999999999999999999999885431   1 11 23588999999887


Q ss_pred             Cccc
Q 021360          215 RPEK  218 (313)
Q Consensus       215 ~~~~  218 (313)
                      ....
T Consensus       370 ~~~l  373 (384)
T 1qyi_A          370 RGVL  373 (384)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5444

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.76  E-value=3e-18  Score=139.07  Aligned_cols=182  Identities=20%  Similarity=0.132  Sum_probs=115.2

Q ss_pred             CccEEE-EecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh-hcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            8 LMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         8 ~~k~vi-fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      ++|.++ ||+||||+|++     .+..+.+.+|.......... ..+. ...+.......... ...        .+.+.
T Consensus         7 ~mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~   72 (201)
T 4ap9_A            7 FMKKVAVIDIEGTLTDFE-----FWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLIR-GID--------EGTFL   72 (201)
T ss_dssp             GGSCEEEEECBTTTBCCC-----HHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHTT-TCB--------HHHHH
T ss_pred             hcceeEEecccCCCcchH-----HHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCC--------HHHHH
Confidence            355565 99999999988     45666666666100000011 1111 11122111111111 000        11233


Q ss_pred             hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCC-CCCCChHHHHHHHHHcCC
Q 021360           85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~-~~kp~~~~~~~~~~~~~~  163 (313)
                      .......++|++.++++.+++.|++++++|+++...+...  +.+++..+++.+...+... ..+|.+.....+++++  
T Consensus        73 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--  148 (201)
T 4ap9_A           73 RTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF--KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF--  148 (201)
T ss_dssp             HGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG--TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG--
T ss_pred             HHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc--
Confidence            3446678999999999999999999999999987766544  6678876655555444321 2344444455566665  


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ++++|++|||+.+|+.+++.+|+.+++.+.. .      .++.++.++.++
T Consensus       149 ~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~-~------~ad~v~~~~~el  192 (201)
T 4ap9_A          149 RDGFILAMGDGYADAKMFERADMGIAVGREI-P------GADLLVKDLKEL  192 (201)
T ss_dssp             TTSCEEEEECTTCCHHHHHHCSEEEEESSCC-T------TCSEEESSHHHH
T ss_pred             CcCcEEEEeCCHHHHHHHHhCCceEEECCCC-c------cccEEEccHHHH
Confidence            9999999999999999999999986554332 1      578888888775

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.75  E-value=5.3e-19  Score=139.32  Aligned_cols=108  Identities=16%  Similarity=0.142  Sum_probs=87.6

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 021360           93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE  172 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vg  172 (313)
                      .|+..++|+.|++.|++++++|+++...+...+ +++++..+|+.         .||+++.++.+++++++++++|++||
T Consensus        38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vG  107 (162)
T 2p9j_A           38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIG  107 (162)
T ss_dssp             EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred             cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence            356679999999999999999999999888888 78888654432         78999999999999999999999999


Q ss_pred             cCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       173 D~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      |+.+|+.+|+.+|+.+++.+.   .+.....++.++.++.+
T Consensus       108 D~~~Di~~a~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~  145 (162)
T 2p9j_A          108 DDVVDIEVMKKVGFPVAVRNA---VEEVRKVAVYITQRNGG  145 (162)
T ss_dssp             CSGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECSSCSS
T ss_pred             CCHHHHHHHHHCCCeEEecCc---cHHHHhhCCEEecCCCC
Confidence            999999999999998765432   22223357888888765

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.74  E-value=1.6e-18  Score=142.43  Aligned_cols=98  Identities=13%  Similarity=0.118  Sum_probs=80.2

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC---CCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD---EVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~---~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .+.|++.++|+.|++.|++++++||++.......+ +.  +.++|+.++.+.   .+...||+|+.+..+++++|+    
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----  160 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----  160 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----
Confidence            45789999999999999999999999876554444 33  445566653322   245689999999999999998    


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      |++|||+.+|+.+|+++|++++++.++.
T Consensus       161 ~l~VGDs~~Di~aA~~aG~~~i~v~~g~  188 (211)
T 2b82_A          161 RIFYGDSDNDITAARDVGARGIRILRAS  188 (211)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred             EEEEECCHHHHHHHHHCCCeEEEEecCC
Confidence            9999999999999999999999998754

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.74  E-value=6.7e-19  Score=149.81  Aligned_cols=203  Identities=15%  Similarity=0.161  Sum_probs=117.2

Q ss_pred             ccCccEEEEecCCccccCh-------HHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHH--
Q 021360            6 KKLMSCVILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV--   76 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--   76 (313)
                      ++++|+|+||+||||++++       .....+ .+.+++.|+.+.  ......|........ .+...++..+...+.  
T Consensus         9 m~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~G~~~~--~~t~~~gr~~~~~~~-~l~~~g~~~~~~~~~~~   84 (271)
T 2x4d_A            9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRSRLKVR--FCTNESAASRAELVG-QLQRLGFDISEQEVTAP   84 (271)
T ss_dssp             TTTCCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHSSSEEE--EECCCCSSCHHHHHH-HHHHTTCCCCGGGEECH
T ss_pred             HhcCCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHCCCcEE--EEECCCCCCHHHHHH-HHHHCCCCCCHHHeecH
Confidence            4468999999999999963       222222 445567776542  222233555544443 344556653321111  


Q ss_pred             -HHHHHHHHhhh--ccCC-----------------------------CCchHHHHHHHHHHC-CCCEEEEeCCchHHHHH
Q 021360           77 -NEVYSMFSDHL--CKVK-----------------------------ALPGANRLIKHLSCH-GVPMALASNSHRATIES  123 (313)
Q Consensus        77 -~~~~~~~~~~~--~~~~-----------------------------~~pgv~e~l~~l~~~-g~~~~i~s~~~~~~~~~  123 (313)
                       ......+....  ....                             .++++.+.++.+++. ++++ ++++.+......
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~  163 (271)
T 2x4d_A           85 APAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVL-ISLGKGRYYAAT  163 (271)
T ss_dssp             HHHHHHHHHHHTCCEEEECCGGGGGGGTTSCCSSCSEEEECCCGGGCCHHHHHHHHHHHHHCSSCCE-EEECCCSEEEET
T ss_pred             HHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCcCHHHHHHHHHHHHhcCCCeE-EEEcCCcccccC
Confidence             11111111110  0011                             234555566666655 5655 444443222111


Q ss_pred             HHHhhcCCccccc---eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCc-c
Q 021360          124 KISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-T  198 (313)
Q Consensus       124 ~l~~~~~~~~~f~---~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~-~  198 (313)
                      .+ ...++..+|+   .....+....+||++..++.+++++|+++++|++|||+. +|+.|++.+|+.++++.++... .
T Consensus       164 ~~-~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~  242 (271)
T 2x4d_A          164 SG-LMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS  242 (271)
T ss_dssp             TE-EEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGG
T ss_pred             CC-cccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCch
Confidence            11 1122222222   222334455789999999999999999999999999998 9999999999999999886322 2


Q ss_pred             cc---ccccceeecccccc
Q 021360          199 HR---YTAADEVINSLLDL  214 (313)
Q Consensus       199 ~~---~~~s~~ii~~l~e~  214 (313)
                      ..   ...++.+++++.++
T Consensus       243 ~~~~~~~~~~~~~~~~~el  261 (271)
T 2x4d_A          243 DEHHPEVKADGYVDNLAEA  261 (271)
T ss_dssp             GGGCSSCCCSEEESSHHHH
T ss_pred             hhcccCCCCCEEeCCHHHH
Confidence            11   13478888888775

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.74  E-value=5.4e-18  Score=149.37  Aligned_cols=102  Identities=22%  Similarity=0.230  Sum_probs=89.7

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEE----------ecCCCCCCCCChHHHHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV----------GSDEVRTGKPSPDIFLEA  157 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~----------~~~~~~~~kp~~~~~~~~  157 (313)
                      ...+++||+.++++.|++.|++++++|++....++..+ +++|+..+|+..+          ..+++..+||+++.++.+
T Consensus       175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~  253 (335)
T 3n28_A          175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL  253 (335)
T ss_dssp             TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred             HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence            45789999999999999999999999999998888777 8889987776432          123455679999999999


Q ss_pred             HHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       158 ~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ++++|+++++|++|||+.+|+.|++.+|+.+++
T Consensus       254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~  286 (335)
T 3n28_A          254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence            999999999999999999999999999998877

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.73  E-value=6.7e-18  Score=145.55  Aligned_cols=189  Identities=16%  Similarity=0.206  Sum_probs=126.0

Q ss_pred             CccEEEEecCCccccChHHHH----------------------------HHHHHHHHHcCCCC-ChhhhhhhcCCCHHH-
Q 021360            8 LMSCVILDLDGTLLNTDGMFS----------------------------EVLKTFLVKYGKEW-DGREKHKIVGKTPLE-   57 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~----------------------------~~~~~~~~~~g~~~-~~~~~~~~~g~~~~~-   57 (313)
                      ++++|+||+||||+|+...+.                            .++.++++++|... +.+.+....|.+... 
T Consensus        31 ~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~~  110 (287)
T 3a1c_A           31 KVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD  110 (287)
T ss_dssp             HCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEET
T ss_pred             cCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEEE
Confidence            579999999999999977664                            78888888888763 333333333332111 


Q ss_pred             -H---HHHHHHHhCCCCCHHHHHHHHHHHHHh------------h-----hccCCCCchHHHHHHHHHHCCCCEEEEeCC
Q 021360           58 -E---AAIIVEDYGLPCAKHEFVNEVYSMFSD------------H-----LCKVKALPGANRLIKHLSCHGVPMALASNS  116 (313)
Q Consensus        58 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~  116 (313)
                       .   ...++...+.+.+ +.+ ....+.+..            .     .....++||+.++|+.|++.|++++++|++
T Consensus       111 ~~~~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~  188 (287)
T 3a1c_A          111 GILVGNKRLMEDFGVAVS-NEV-ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD  188 (287)
T ss_dssp             TEEEECHHHHHHTTCCCC-HHH-HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECCHHHHHhcCCCcc-HHH-HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence             0   0112222233221 111 122222221            0     124588999999999999999999999999


Q ss_pred             chHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          117 HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       117 ~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      +...+...+ +.+|+..+|+.++       +.+    ...++++++.+ ++|++|||+.+|+.+++.+|+.+.+ ...  
T Consensus       189 ~~~~~~~~l-~~~gl~~~f~~i~-------~~~----K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~-~~~--  252 (287)
T 3a1c_A          189 NWRSAEAIS-RELNLDLVIAEVL-------PHQ----KSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSG--  252 (287)
T ss_dssp             CHHHHHHHH-HHHTCSEEECSCC-------TTC----HHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEE-CCC--
T ss_pred             CHHHHHHHH-HHhCCceeeeecC-------hHH----HHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEe-CCC--
Confidence            999888888 7889977776553       112    25677888888 9999999999999999999998544 321  


Q ss_pred             ccccccccceee--cccccc
Q 021360          197 QTHRYTAADEVI--NSLLDL  214 (313)
Q Consensus       197 ~~~~~~~s~~ii--~~l~e~  214 (313)
                      .......++.++  .++.++
T Consensus       253 ~~~~~~~ad~v~~~~~~~~l  272 (287)
T 3a1c_A          253 SDVAVESGDIVLIRDDLRDV  272 (287)
T ss_dssp             SCCSSCCSSEEESSSCTHHH
T ss_pred             CHHHHhhCCEEEeCCCHHHH
Confidence            122233577887  666654

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.73  E-value=3.6e-19  Score=152.09  Aligned_cols=123  Identities=16%  Similarity=0.189  Sum_probs=93.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHH--HHHhhcCCccccceEEecCC-CCCCCCChHHHHHHHHHcCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIES--KISYQHGWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~--~l~~~~~~~~~f~~v~~~~~-~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      ..++|++.+.++.+ ..|+++ ++|+.+......  ...+..++..+|+.+++.+. ...+||++..++.+++++|++++
T Consensus       136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~  213 (271)
T 1vjr_A          136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE  213 (271)
T ss_dssp             TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred             CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence            34678999999999 778887 888876532211  01123345556676677777 78899999999999999999999


Q ss_pred             cEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccc----cccceeecccccc
Q 021360          167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDL  214 (313)
Q Consensus       167 ~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~----~~s~~ii~~l~e~  214 (313)
                      +|++|||+. +|+.||+.+|+.++++.++.......    ..++.+++++.++
T Consensus       214 e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el  266 (271)
T 1vjr_A          214 RMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGEL  266 (271)
T ss_dssp             GEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHH
T ss_pred             eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHH
Confidence            999999995 99999999999999998865432211    2578888888765

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.72  E-value=9.2e-19  Score=150.68  Aligned_cols=119  Identities=18%  Similarity=0.276  Sum_probs=96.5

Q ss_pred             hHHHHHHHHHHCCCCEEEEeCCchHHH--HH-HHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHc----CCCCCc
Q 021360           95 GANRLIKHLSCHGVPMALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPSS  167 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~s~~~~~~~--~~-~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~----~~~~~~  167 (313)
                      ...++++.|++.|++ +++||.+....  .. .+.+..++..+|+.+++++++..+||+|+.|..+++++    |++|++
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~  227 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE  227 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence            566777789999999 99999977654  21 21144577788899998888889999999999999999    999999


Q ss_pred             EEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc-c-------cccceeecccccc
Q 021360          168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y-------TAADEVINSLLDL  214 (313)
Q Consensus       168 ~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~-------~~s~~ii~~l~e~  214 (313)
                      |+||||+. +|+.+|+++|+.++++.++...... .       ..++.+++++.++
T Consensus       228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el  283 (284)
T 2hx1_A          228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE  283 (284)
T ss_dssp             EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred             EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence            99999996 9999999999999999886543222 1       3578888888764

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.71  E-value=1.5e-18  Score=151.04  Aligned_cols=124  Identities=18%  Similarity=0.278  Sum_probs=99.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHH--H-HHHHhhcC-CccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~--~-~~l~~~~~-~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      ..++|++.++++.|++.|+ ++++||.+....  . ..+ ...| +..+|+.+++++++..+||++..|+.+++++|++|
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~  232 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDP  232 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCG
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCCh
Confidence            3457899999999999888 999998876543  1 122 3344 56667777788888899999999999999999999


Q ss_pred             CcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----------ccccceeeccccccC
Q 021360          166 SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLDLR  215 (313)
Q Consensus       166 ~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----------~~~s~~ii~~l~e~~  215 (313)
                      ++|++|||+. +|+.+|+.+|+.++++.++......          ...++.+++++.++.
T Consensus       233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~  293 (306)
T 2oyc_A          233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLT  293 (306)
T ss_dssp             GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGG
T ss_pred             HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHH
Confidence            9999999996 9999999999999999886543211          136899999998864

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.71  E-value=1.7e-18  Score=148.32  Aligned_cols=188  Identities=17%  Similarity=0.187  Sum_probs=121.6

Q ss_pred             ccCccEEEEecCCcccc----------------------------ChHHHHHHHHHHHHHcCCCCCh-hhhhhhcCCCHH
Q 021360            6 KKLMSCVILDLDGTLLN----------------------------TDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPL   56 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d----------------------------~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~g~~~~   56 (313)
                      ++++|+|+||+||||+|                            +.+.+..++.+.+++.+..... .......|....
T Consensus        10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~   89 (280)
T 3skx_A           10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE   89 (280)
T ss_dssp             GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred             hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence            35789999999999999                            8888889999999988876432 222222222111


Q ss_pred             HH---------HHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc----------------CCCCchHHHHHHHHHHCCCCEE
Q 021360           57 EE---------AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK----------------VKALPGANRLIKHLSCHGVPMA  111 (313)
Q Consensus        57 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~pgv~e~l~~l~~~g~~~~  111 (313)
                      ..         ...++...+.....  ...   +........                ..++|++.++|+.|++.|++++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~  164 (280)
T 3skx_A           90 GIVNGRRYMVVSPGYIRELGIKTDE--SVE---KLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCM  164 (280)
T ss_dssp             EEETTEEEEEECHHHHHHTTCCCCT--THH---HHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEE
T ss_pred             EEECCEEEEEecHHHHHHcCCCchH--HHH---HHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEE
Confidence            00         02233444443221  111   111111110                1688999999999999999999


Q ss_pred             EEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          112 LASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       112 i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      ++|+.+...+...+ +.+|+..+|+.+++.+..       ...+...+.+     +|++|||+.||+.|++.+|+.+.+.
T Consensus       165 i~T~~~~~~~~~~~-~~~gl~~~f~~~~~~~k~-------~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~  231 (280)
T 3skx_A          165 MLTGDNRFVAKWVA-EELGLDDYFAEVLPHEKA-------EKVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAIG  231 (280)
T ss_dssp             EECSSCHHHHHHHH-HHHTCSEEECSCCGGGHH-------HHHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEECS
T ss_pred             EEeCCCHHHHHHHH-HHcCChhHhHhcCHHHHH-------HHHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEec
Confidence            99999999988888 889998888877765432       3333333332     8999999999999999999755443


Q ss_pred             CCCCCccccccccceee--cccccc
Q 021360          192 PSLPKQTHRYTAADEVI--NSLLDL  214 (313)
Q Consensus       192 ~~~~~~~~~~~~s~~ii--~~l~e~  214 (313)
                      +   ........++.+.  .++.++
T Consensus       232 ~---~~~~~~~~a~~~~~~~~~~~l  253 (280)
T 3skx_A          232 A---GTDVAVETADIVLVRNDPRDV  253 (280)
T ss_dssp             C---CSSSCCCSSSEECSSCCTHHH
T ss_pred             C---CcHHHHhhCCEEEeCCCHHHH
Confidence            2   2222333455555  455443

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.69  E-value=2.1e-17  Score=140.65  Aligned_cols=85  Identities=18%  Similarity=0.227  Sum_probs=69.8

Q ss_pred             ccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCccccc----cccceee
Q 021360          134 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVI  208 (313)
Q Consensus       134 ~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~----~~s~~ii  208 (313)
                      +|+.++..+....+||++..++.+++++|++++++++|||+ .+|+.+|+.+|+.++++.++.......    ..++.++
T Consensus       168 ~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~  247 (264)
T 3epr_A          168 LLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVL  247 (264)
T ss_dssp             HHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEE
T ss_pred             HHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEE
Confidence            34445555666789999999999999999999999999999 699999999999999999865443332    2689999


Q ss_pred             ccccccCccc
Q 021360          209 NSLLDLRPEK  218 (313)
Q Consensus       209 ~~l~e~~~~~  218 (313)
                      +++.++...+
T Consensus       248 ~~l~~l~~~~  257 (264)
T 3epr_A          248 ASLDEWTFNE  257 (264)
T ss_dssp             SCGGGCCSCC
T ss_pred             CCHHHHhccc
Confidence            9999875544

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.69  E-value=4e-17  Score=128.76  Aligned_cols=99  Identities=11%  Similarity=0.053  Sum_probs=81.5

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      .++.|++.|++++++|+.+...++..+ +++++..+|+.         .||+++.++.+++++++++++|++|||+.+|+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di  108 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA  108 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            789999999999999999999998888 88898654443         39999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      .+++.+|+.+++.+.   .+.....++.++.+
T Consensus       109 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~  137 (164)
T 3e8m_A          109 KLLKRVGIAGVPASA---PFYIRRLSTIFLEK  137 (164)
T ss_dssp             HHHTTSSEEECCTTS---CHHHHTTCSSCCCC
T ss_pred             HHHHHCCCeEEcCCh---HHHHHHhCcEEecc
Confidence            999999997765433   22223346666655

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.69  E-value=1.7e-17  Score=133.03  Aligned_cols=106  Identities=16%  Similarity=0.129  Sum_probs=85.9

Q ss_pred             hHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC
Q 021360           95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS  174 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~  174 (313)
                      ...++|+.|++.|++++++|+.+...+...+ +.+++..+|+         ..||+++.++.+++++++++++|++|||+
T Consensus        39 ~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~---------~~k~k~~~~~~~~~~~~~~~~~~~~vGD~  108 (180)
T 1k1e_A           39 RDGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFL---------GKLEKETACFDLMKQAGVTAEQTAYIGDD  108 (180)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEE---------SCSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred             chHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeec---------CCCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence            4457899999999999999999999888888 7889854442         25899999999999999999999999999


Q ss_pred             HhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          175 VIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       175 ~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+|+.+++.+|+.+++.+.   .+.....++.++.+..+
T Consensus       109 ~~Di~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~~~  144 (180)
T 1k1e_A          109 SVDLPAFAACGTSFAVADA---PIYVKNAVDHVLSTHGG  144 (180)
T ss_dssp             GGGHHHHHHSSEEEECTTS---CHHHHTTSSEECSSCTT
T ss_pred             HHHHHHHHHcCCeEEeCCc---cHHHHhhCCEEecCCCC
Confidence            9999999999998775432   22233457777776543

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.69  E-value=1.1e-17  Score=137.17  Aligned_cols=100  Identities=15%  Similarity=0.147  Sum_probs=83.2

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      +|+.|++.|++++++|+.+...++..+ +.+|+..+|+.+         +|+++.++.+++++|+++++|++|||+.+|+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi  153 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW  153 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence            899999999999999999999998888 889996555432         7889999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+.+++.+.   .+.....++.+..+.
T Consensus       154 ~~~~~ag~~~a~~~~---~~~~~~~Ad~v~~~~  183 (211)
T 3ij5_A          154 PVMAQVGLSVAVADA---HPLLLPKAHYVTRIK  183 (211)
T ss_dssp             HHHTTSSEEEECTTS---CTTTGGGSSEECSSC
T ss_pred             HHHHHCCCEEEeCCc---cHHHHhhCCEEEeCC
Confidence            999999998665432   223334577777665

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.69  E-value=4.8e-18  Score=144.58  Aligned_cols=121  Identities=13%  Similarity=0.148  Sum_probs=96.7

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHH--HHHHHhh-cCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~--~~~l~~~-~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      ..++|++.++++.|+ .|+++ ++||.+....  ...+ .. .++..+|+.+++++....+||+|+.|+.++++  ++|+
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~  203 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGE  203 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTC
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcc
Confidence            467899999999999 88888 9999876543  2223 22 45666778888888888899999999999988  9999


Q ss_pred             cEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc-c---cccceeeccccccC
Q 021360          167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLR  215 (313)
Q Consensus       167 ~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~-~---~~s~~ii~~l~e~~  215 (313)
                      +|+||||+. +|+.+|+++|+.++++.++...... .   ..++.+++++.++.
T Consensus       204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~  257 (263)
T 1zjj_A          204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELI  257 (263)
T ss_dssp             EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGG
T ss_pred             cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHH
Confidence            999999996 9999999999999999886432221 1   25888999988763

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.69  E-value=3.3e-16  Score=125.43  Aligned_cols=163  Identities=11%  Similarity=0.103  Sum_probs=106.7

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-h
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H   86 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   86 (313)
                      |+++|+||+||||+|+...+..++.+   .+|...+.+...   |......+       +.  ..+.+...+   +.. .
T Consensus         3 m~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~~---g~~~~~~~-------~~--~~~~~~~~~---~~~~~   64 (180)
T 3bwv_A            3 TRQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESLN---GKKLKHMI-------PE--HEGLVMDIL---KEPGF   64 (180)
T ss_dssp             CCCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGCT---TCCC-----------------CHHHHHH---HSTTG
T ss_pred             cccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHHc---CccHHHHC-------Cc--hHHHHHHHH---hCcch
Confidence            45899999999999999888777765   567766654432   33322211       11  111111111   111 2


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCC---chHH--HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNS---HRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~---~~~~--~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                      ....+++||+.++|+.|++. ++++++|++   +...  ....+...++...+++.++++++.               .+
T Consensus        65 ~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l  128 (180)
T 3bwv_A           65 FRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II  128 (180)
T ss_dssp             GGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB
T ss_pred             hccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee
Confidence            34678999999999999985 999999998   3222  233453446777777888887652               11


Q ss_pred             CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                          ++|++|||+++|+.  +.+| ++++++.+....   ..++.++.++.|+
T Consensus       129 ----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el  171 (180)
T 3bwv_A          129 ----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDV  171 (180)
T ss_dssp             ----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHH
T ss_pred             ----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHH
Confidence                77999999999985  5689 999998643221   2466778777764

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.68  E-value=6e-17  Score=130.84  Aligned_cols=100  Identities=15%  Similarity=0.150  Sum_probs=81.9

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      +|+.|++.|++++++|+.+...++..+ +++|+..+|+.+         +++++.++.+++++|+++++|++|||+.+|+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi  123 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL  123 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence            889999999999999999999998888 889996665543         6677999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+.+++.+.   .+.....++.++.+-
T Consensus       124 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~  153 (189)
T 3mn1_A          124 PVIRRVGLGMAVANA---ASFVREHAHGITRAQ  153 (189)
T ss_dssp             HHHHHSSEEEECTTS---CHHHHHTSSEECSSC
T ss_pred             HHHHHCCCeEEeCCc---cHHHHHhCCEEecCC
Confidence            999999997654332   222333567776653

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.68  E-value=3.2e-18  Score=136.76  Aligned_cols=98  Identities=13%  Similarity=0.113  Sum_probs=81.1

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      +|+.|++.|++++++|+++...++..+ +.+|+.     ++.+     .||+++.++.+++++++++++|++|||+.+|+
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-----~~~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~  115 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-----VLHG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL  115 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-----EEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-----eEeC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence            899999999999999999999998888 888984     3333     38999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      .+++.+|+.+++.+.   .+.....++.++.+
T Consensus       116 ~~~~~ag~~v~~~~~---~~~~~~~ad~v~~~  144 (176)
T 3mmz_A          116 PCFALVGWPVAVASA---HDVVRGAARAVTTV  144 (176)
T ss_dssp             HHHHHSSEEEECTTC---CHHHHHHSSEECSS
T ss_pred             HHHHHCCCeEECCCh---hHHHHHhCCEEecC
Confidence            999999987655432   22333457777766

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.68  E-value=1.7e-16  Score=143.36  Aligned_cols=99  Identities=15%  Similarity=0.275  Sum_probs=87.1

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCc---------hHH---HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSH---------RAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~---------~~~---~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ++||+.++|+.|++.|++++++||.+         ..+   +...+ +.+|+.  |+.+++++++..+||+|++|..+++
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~  164 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE  164 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence            78999999999999999999999965         222   55566 778874  8999999999999999999999999


Q ss_pred             HcC----CCCCcEEEEecCH-----------------hhHHHHHHcCCeEEEeCC
Q 021360          160 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       160 ~~~----~~~~~~i~vgD~~-----------------~Di~~a~~~G~~~i~v~~  193 (313)
                      +++    +++++|+||||+.                 .|+.+|+++|+.++....
T Consensus       165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe~  219 (416)
T 3zvl_A          165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPEE  219 (416)
T ss_dssp             HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHHH
T ss_pred             HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcHH
Confidence            997    9999999999997                 899999999999765433

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.66  E-value=2.6e-16  Score=133.96  Aligned_cols=82  Identities=26%  Similarity=0.366  Sum_probs=65.2

Q ss_pred             ccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcccc-cc---ccceee
Q 021360          134 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-YT---AADEVI  208 (313)
Q Consensus       134 ~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~-~~---~s~~ii  208 (313)
                      +|+.++..+....+||++..++.+++++|++++++++|||+ .+|+.|++.+|+.++++.++...... ..   .+++++
T Consensus       169 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~  248 (266)
T 3pdw_A          169 VLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAI  248 (266)
T ss_dssp             HHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEE
T ss_pred             HHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEe
Confidence            34444555666789999999999999999999999999999 79999999999999999986543332 22   489999


Q ss_pred             ccccccC
Q 021360          209 NSLLDLR  215 (313)
Q Consensus       209 ~~l~e~~  215 (313)
                      +++.++.
T Consensus       249 ~~~~el~  255 (266)
T 3pdw_A          249 DSLTEWI  255 (266)
T ss_dssp             SSGGGGH
T ss_pred             CCHHHHH
Confidence            9998864

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.65  E-value=1.4e-16  Score=129.08  Aligned_cols=100  Identities=14%  Similarity=0.202  Sum_probs=81.7

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      .|+.|++.|++++++|+.+...++..+ +.+|+..+|+.         .||++..++.+++++++++++|++|||+.||+
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi  129 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDW  129 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence            488899999999999999999998888 88998544432         38999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+.+++.+.   .+.....++.+..+-
T Consensus       130 ~~~~~ag~~va~~na---~~~~~~~ad~v~~~~  159 (195)
T 3n07_A          130 PVMEKVALRVCVADG---HPLLAQRANYVTHIK  159 (195)
T ss_dssp             HHHTTSSEEEECTTS---CHHHHHHCSEECSSC
T ss_pred             HHHHHCCCEEEECCh---HHHHHHhCCEEEcCC
Confidence            999999998655432   233334567776654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.65  E-value=6.8e-17  Score=130.71  Aligned_cols=100  Identities=15%  Similarity=0.175  Sum_probs=82.0

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      .|+.|++.|++++++||.+...+...+ +.+|+..+|+.+         ||+++.++.+++++++++++|++|||+.+|+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di  123 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL  123 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence            488899999999999999999998888 888986554432         8999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+.+++.+.   .+.....++.++.+.
T Consensus       124 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~  153 (191)
T 3n1u_A          124 PLIQQVGLGVAVSNA---VPQVLEFADWRTERT  153 (191)
T ss_dssp             HHHHHSSEEEECTTC---CHHHHHHSSEECSSC
T ss_pred             HHHHHCCCEEEeCCc---cHHHHHhCCEEecCC
Confidence            999999998743322   233334577777664

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.63  E-value=9.6e-17  Score=138.38  Aligned_cols=119  Identities=13%  Similarity=0.104  Sum_probs=89.1

Q ss_pred             CCCchHHHHHHHHHHC-CCCEEEEeCC---------------------chHHHHHHHHhhcCCccccceE----------
Q 021360           91 KALPGANRLIKHLSCH-GVPMALASNS---------------------HRATIESKISYQHGWNESFSVI----------  138 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~-g~~~~i~s~~---------------------~~~~~~~~l~~~~~~~~~f~~v----------  138 (313)
                      ...+++.++++.+++. |+.+.+.|+.                     ....+...+ +..++..+|..+          
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~  200 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKIC-EEYGVSVNINRCNPLAGDPEDS  200 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHH-HHHTEEEEEEECCGGGTCCTTE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHH-HHcCCCEEEEEccccccCCCCc
Confidence            5678999999999887 8988888876                     445555555 667776555443          


Q ss_pred             EecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       139 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+.+....+++++..++.+++++|+++++|++|||+.+|+.+++.+|+.+++.+.   .......++.++.+..+
T Consensus       201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~  272 (289)
T 3gyg_A          201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNA---TQEAKNLHNLITDSEYS  272 (289)
T ss_dssp             EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTC---CHHHHHHCCCBCSSCHH
T ss_pred             eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCc---cHHHHHhCCEEcCCCCc
Confidence            4444556788999999999999999999999999999999999999976544332   23333346666665543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.43  E-value=2.3e-17  Score=140.27  Aligned_cols=111  Identities=17%  Similarity=0.201  Sum_probs=89.6

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ..+++|++.++|+.|++.|++++++|+.+...++..+ +++|+..+|+.++           |+.+..++++++.++++|
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~  201 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKV  201 (263)
Confidence            4578999999999999999999999999999888888 8889988887665           344567888899999999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceee--cccccc
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDL  214 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii--~~l~e~  214 (313)
                      +||||+.+|+.+++.+|+.+.+...   .......++.++  +++.++
T Consensus       202 ~~VGD~~~D~~aa~~Agv~va~g~~---~~~~~~~ad~v~~~~~l~~l  246 (263)
T 2yj3_A          202 LMIGDGVNDAAALALADVSVAMGNG---VDISKNVADIILVSNDIGTL  246 (263)
Confidence            9999999999999999987555421   222233577777  777665

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.61  E-value=2.8e-15  Score=120.87  Aligned_cols=100  Identities=14%  Similarity=0.172  Sum_probs=82.1

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV  178 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di  178 (313)
                      +|+.|++.|++++++|+.+...++..+ +.+|+..+|+         ..||+++.++.+++++|+++++|++|||+.+|+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~---------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di  130 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW  130 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEEC---------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeec---------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence            789999999999999999999888888 7788854332         268999999999999999999999999999999


Q ss_pred             HHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       179 ~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+++.+|+.+++...   .......++.++.+.
T Consensus       131 ~~a~~ag~~~~~~~~---~~~~~~~ad~v~~~~  160 (188)
T 2r8e_A          131 PVMEKVGLSVAVADA---HPLLIPRADYVTRIA  160 (188)
T ss_dssp             HHHTTSSEEEECTTS---CTTTGGGSSEECSSC
T ss_pred             HHHHHCCCEEEecCc---CHHHHhcCCEEEeCC
Confidence            999999998765432   222233577777766

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.59  E-value=7.4e-16  Score=131.23  Aligned_cols=72  Identities=36%  Similarity=0.414  Sum_probs=62.0

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEeCCCCCcccccc--------ccceeecccccc
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDL  214 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~-~~Di~~a~~~G~~~i~v~~~~~~~~~~~--------~s~~ii~~l~e~  214 (313)
                      ...+||++..++.+++++|++++++++|||+ .+|+.+|+.+|+.+++|.++........        .++++++++.++
T Consensus       183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el  262 (268)
T 3qgm_A          183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM  262 (268)
T ss_dssp             EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred             eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence            5579999999999999999999999999999 5999999999999999998655433322        689999998876


Q ss_pred             C
Q 021360          215 R  215 (313)
Q Consensus       215 ~  215 (313)
                      .
T Consensus       263 ~  263 (268)
T 3qgm_A          263 V  263 (268)
T ss_dssp             H
T ss_pred             H
Confidence            3

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.58  E-value=4.2e-16  Score=133.53  Aligned_cols=76  Identities=20%  Similarity=0.094  Sum_probs=58.6

Q ss_pred             cceEEecC----CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          135 FSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       135 f~~v~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      +..+.++.    ....+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++-   ...+.....++.+..+
T Consensus       179 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~---na~~~~k~~A~~v~~~  255 (279)
T 4dw8_A          179 INVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG---NAQEPVKKAADYITLT  255 (279)
T ss_dssp             CEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT---TSCHHHHHHCSEECCC
T ss_pred             EEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC---CCcHHHHHhCCEEcCC
Confidence            45555543    2346778899999999999999999999999999999999999755443   3344445568888887


Q ss_pred             ccc
Q 021360          211 LLD  213 (313)
Q Consensus       211 l~e  213 (313)
                      ..+
T Consensus       256 ~~e  258 (279)
T 4dw8_A          256 NDE  258 (279)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            755

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.57  E-value=7.8e-16  Score=132.63  Aligned_cols=66  Identities=17%  Similarity=0.050  Sum_probs=54.3

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ..+.+++..++.+++++|+++++|++|||+.||++|++.+|+.+++-+.   .+.....++.+..+..+
T Consensus       198 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na---~~~~k~~Ad~v~~s~~e  263 (290)
T 3dnp_A          198 PKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNA---VPEIKRKADWVTRSNDE  263 (290)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHSSEECCCTTT
T ss_pred             ECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCC---cHHHHHhcCEECCCCCc
Confidence            3677788999999999999999999999999999999999986655433   34445568888887755

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.56  E-value=2.2e-15  Score=125.60  Aligned_cols=191  Identities=15%  Similarity=0.070  Sum_probs=114.2

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHc---CCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHH-HHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN-EVYSMF   83 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   83 (313)
                      |+|+|+||+||||+++...+.+...++++++   |+.+.     -..|+.... ...+.+..+.+...-.... .+.. -
T Consensus         2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~-----i~TGR~~~~-~~~~~~~l~~~~~~i~~nGa~i~~-~   74 (231)
T 1wr8_A            2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIM-----LVTGNTVQF-AEAASILIGTSGPVVAEDGGAISY-K   74 (231)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEE-----EECSSCHHH-HHHHHHHHTCCSCEEEGGGTEEEE-T
T ss_pred             ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEE-----EEcCCChhH-HHHHHHHcCCCCeEEEeCCcEEEe-C
Confidence            4799999999999998765555555555544   54321     123443332 2334444554321000000 0000 0


Q ss_pred             HhhhccCCCCchHHHHHHHHH-HC-CCCE-----------EEEe-CCchHHHHHHHHhhcCCccccceEEecC----CCC
Q 021360           84 SDHLCKVKALPGANRLIKHLS-CH-GVPM-----------ALAS-NSHRATIESKISYQHGWNESFSVIVGSD----EVR  145 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~-~~-g~~~-----------~i~s-~~~~~~~~~~l~~~~~~~~~f~~v~~~~----~~~  145 (313)
                      .+......+ +.+.++++.++ +. |+..           .+++ +.+.+.+...+ +.++  ..|+.+ ++.    ...
T Consensus        75 ~~~~~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~  149 (231)
T 1wr8_A           75 KKRIFLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKK  149 (231)
T ss_dssp             TEEEESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEEC
T ss_pred             CEEEEeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEec
Confidence            000111122 77777877777 54 5443           4554 33566666666 5444  456666 442    234


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .++|++..++.+++++|++++++++|||+.||+.+++.+|+.+ .+...  .+.....++.++.+..+
T Consensus       150 ~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~~~--~~~~~~~a~~v~~~~~e  214 (231)
T 1wr8_A          150 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVAQA--PKILKENADYVTKKEYG  214 (231)
T ss_dssp             TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECTTS--CHHHHTTCSEECSSCHH
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EecCC--CHHHHhhCCEEecCCCc
Confidence            7889999999999999999999999999999999999999984 34332  22233457777777654

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.53  E-value=8.9e-14  Score=118.52  Aligned_cols=100  Identities=9%  Similarity=0.052  Sum_probs=69.3

Q ss_pred             CCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 021360          107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA  180 (313)
Q Consensus       107 g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~------~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~  180 (313)
                      ++...++. .+........ +.++.  .|+.+.++.      ....+.+++..++.+++++|++++++++|||+.||++|
T Consensus       156 ~~~ki~~~-~~~~~~~~~~-~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m  231 (274)
T 3fzq_A          156 DIHKICLW-SNEKVFDEVK-DILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVM  231 (274)
T ss_dssp             CCCEEEEE-CCHHHHHHHH-HHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHH
T ss_pred             CeEEEEEE-cCHHHHHHHH-HHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHH
Confidence            33344444 4444444444 43332  245555443      24477888999999999999999999999999999999


Q ss_pred             HHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       181 a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ++.+|+.+++-+.   .+.....++.++.+..+
T Consensus       232 ~~~ag~~vam~na---~~~~k~~A~~v~~~~~e  261 (274)
T 3fzq_A          232 FQASDVTIAMKNS---HQQLKDIATSICEDIFD  261 (274)
T ss_dssp             HHTCSEEEEETTS---CHHHHHHCSEEECCGGG
T ss_pred             HHhcCceEEecCc---cHHHHHhhhheeCCCch
Confidence            9999976665333   34445568888888765

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.52  E-value=7.8e-15  Score=125.59  Aligned_cols=65  Identities=15%  Similarity=0.099  Sum_probs=45.9

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+..++..++.+++++|++++++++|||+.||++|++.+|+.+++-   ...+.....++.+..+..+
T Consensus       194 ~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~---na~~~~k~~A~~v~~~~~e  258 (279)
T 3mpo_A          194 RRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG---NAIDEVKEAAQAVTLTNAE  258 (279)
T ss_dssp             SSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC------CCHHHHHCSCBC-----
T ss_pred             CCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc---CCCHHHHHhcceeccCCCc
Confidence            4555789999999999999999999999999999999999754443   3344455568888887755

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.49  E-value=6.1e-14  Score=110.53  Aligned_cols=97  Identities=14%  Similarity=0.041  Sum_probs=75.4

Q ss_pred             HHHHHHHCCCCEEEEeCCchHHHHHHHHh--hcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHh
Q 021360           99 LIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI  176 (313)
Q Consensus        99 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~--~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~  176 (313)
                      .|+.|++.|++++++|+.  ..+...+ +  .+++    + ++.+     .+++++.++.+++++++++++|++|||+.|
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l-~~l~lgi----~-~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n  110 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTL-SALKLDC----K-TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS  110 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHH-HTTCCCC----C-EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHH-HHhCCCc----E-EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence            588899999999999998  5566666 6  5566    3 3322     367889999999999999999999999999


Q ss_pred             hHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       177 Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      |+.+++.+|+.+++-+.   .+.....++.+..+-
T Consensus       111 Di~~~~~ag~~~a~~na---~~~~k~~Ad~v~~~~  142 (168)
T 3ewi_A          111 DEECLKRVGLSAVPADA---CSGAQKAVGYICKCS  142 (168)
T ss_dssp             GHHHHHHSSEEEECTTC---CHHHHTTCSEECSSC
T ss_pred             HHHHHHHCCCEEEeCCh---hHHHHHhCCEEeCCC
Confidence            99999999998654222   233344677777654

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.49  E-value=1.3e-15  Score=129.41  Aligned_cols=67  Identities=13%  Similarity=0.120  Sum_probs=54.0

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ...+++++..++.+++++|+++++|++|||+.||+.|++.+|+.+++-   ...+.....++.++.+..+
T Consensus       182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~---n~~~~~~~~a~~v~~~~~~  248 (261)
T 2rbk_A          182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG---QAKEDVKAAADYVTAPIDE  248 (261)
T ss_dssp             ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT---TSCHHHHHHSSEECCCGGG
T ss_pred             cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec---CccHHHHhhCCEEeccCch
Confidence            347789999999999999999999999999999999999999966542   2223334467888877765

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.49  E-value=8.5e-14  Score=117.45  Aligned_cols=140  Identities=18%  Similarity=0.219  Sum_probs=96.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      .++++|+||+||||+++...+...+..     +..+         ..                 .+++       +... 
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~-----~~~~---------~~-----------------~~~~-------~~~~-   97 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKT-----GKGY---------PY-----------------KWDD-------WINK-   97 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHH-----SCCT---------TT-----------------THHH-------HHHH-
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhc-----ccch---------HH-----------------HHHH-------HHHc-
Confidence            468999999999999997755433322     1111         00                 0111       1111 


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCc---hHHHHHHHHhhcCCc--cccceEEecCCCCCCCCChHHHHHHHHHc
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRL  161 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~---~~~~~~~l~~~~~~~--~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  161 (313)
                       ...+++||+.++|+.|++.|++++++|+++   ...+...+ +.+|+.  .+++.++++++.  .||.+  ..... ..
T Consensus        98 -~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~  170 (258)
T 2i33_A           98 -AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQ  170 (258)
T ss_dssp             -CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HH
T ss_pred             -CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-Hh
Confidence             346789999999999999999999999998   44555566 778887  677877776643  34433  33332 33


Q ss_pred             CCCCCcEEEEecCHhhHHHHH-------H---------cCCeEEEeCCC
Q 021360          162 NMEPSSSLVIEDSVIGVVAGK-------A---------AGMEVVAVPSL  194 (313)
Q Consensus       162 ~~~~~~~i~vgD~~~Di~~a~-------~---------~G~~~i~v~~~  194 (313)
                      +.  +.|++|||+.+|+.+|.       +         +|++++.++.+
T Consensus       171 ~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~  217 (258)
T 2i33_A          171 TH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNP  217 (258)
T ss_dssp             HE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred             CC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCC
Confidence            33  34999999999999982       4         89999999874

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.47  E-value=1.5e-13  Score=117.94  Aligned_cols=76  Identities=12%  Similarity=0.132  Sum_probs=58.7

Q ss_pred             cceEEecCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          135 FSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       135 f~~v~~~~~----~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      +..+.++..    ...+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++-+.   .+.....++.+..+
T Consensus       193 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na---~~~~k~~A~~v~~s  269 (283)
T 3dao_A          193 AHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNA---RQEVIAAAKHTCAP  269 (283)
T ss_dssp             EEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTS---CHHHHHHSSEEECC
T ss_pred             EEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCC---CHHHHHhcCeECCC
Confidence            355555442    23566788999999999999999999999999999999999987665433   34445578888887


Q ss_pred             ccc
Q 021360          211 LLD  213 (313)
Q Consensus       211 l~e  213 (313)
                      ..+
T Consensus       270 ~~e  272 (283)
T 3dao_A          270 YWE  272 (283)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            755

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.46  E-value=2.9e-14  Score=120.65  Aligned_cols=195  Identities=12%  Similarity=0.123  Sum_probs=108.6

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHc---CCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS   84 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (313)
                      ++|+|+||+||||+++.+.+.+...++++++   |+.+.     ...|++.... ..++..++.+. .-...........
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~-----~aTGR~~~~~-~~~~~~l~~~~-~i~~nGa~i~~~~   74 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVA-----IATGRAPFMF-EHVRKQLGIDS-FVSFNGQYVVFEG   74 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEE-----EECSSCGGGS-HHHHHHHTCCC-EEEGGGTEEEETT
T ss_pred             CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEE-----EECCCChHHH-HHHHHhcCCCE-EEECCCCEEEECC
Confidence            4689999999999998766666655555544   54321     1233332221 12233333321 0000000000000


Q ss_pred             hh-hccCCCCchHHHHHHHHHHCCCCEEEEeCCch-------HHHHHHHHhhcC-----C-------ccccceEEecC--
Q 021360           85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHR-------ATIESKISYQHG-----W-------NESFSVIVGSD--  142 (313)
Q Consensus        85 ~~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~-------~~~~~~l~~~~~-----~-------~~~f~~v~~~~--  142 (313)
                      .. .......+.+.++++.+++.++.+.+.+....       ......+ ...+     +       ...++.++.++  
T Consensus        75 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~  153 (258)
T 2pq0_A           75 NVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSM-ASLKFAHPPVDPLYYENKDIYQALLFCRAE  153 (258)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHH-HHTTCCCCCBCTTGGGGSCCCEEEECSCHH
T ss_pred             EEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHH-HhhcCCccccccchhhccCceEEEEECCHH
Confidence            00 11233456777888888887777777654330       1111111 1111     1       11222222221  


Q ss_pred             -----------------------CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc
Q 021360          143 -----------------------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH  199 (313)
Q Consensus       143 -----------------------~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~  199 (313)
                                             -...+-.+...++.+++++|+++++|++|||+.||++|++.+|+.+++-   ...+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~---na~~~  230 (258)
T 2pq0_A          154 EEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG---NAHEE  230 (258)
T ss_dssp             HHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET---TCCHH
T ss_pred             HHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC---CCcHH
Confidence                                   1123445678899999999999999999999999999999999987753   22344


Q ss_pred             cccccceeeccccc
Q 021360          200 RYTAADEVINSLLD  213 (313)
Q Consensus       200 ~~~~s~~ii~~l~e  213 (313)
                      ....++.+..+..+
T Consensus       231 ~k~~A~~v~~~~~~  244 (258)
T 2pq0_A          231 VKRVADFVTKPVDK  244 (258)
T ss_dssp             HHHTCSEEECCGGG
T ss_pred             HHHhCCEEeCCCCc
Confidence            44568888887755

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.39  E-value=1.3e-13  Score=119.53  Aligned_cols=76  Identities=13%  Similarity=0.000  Sum_probs=58.1

Q ss_pred             cceEEecCC----CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          135 FSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       135 f~~v~~~~~----~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      +..+.++..    ...+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++-   ...+.....++.++.+
T Consensus       210 ~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~---na~~~~k~~Ad~v~~~  286 (304)
T 3l7y_A          210 LVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA---NAPKNVKAAANYQAKS  286 (304)
T ss_dssp             EEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT---TSCHHHHHHCSEECCC
T ss_pred             EEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC---CcCHHHHHhccEEcCC
Confidence            455555432    235667789999999999999999999999999999999999765543   3344455568888887


Q ss_pred             ccc
Q 021360          211 LLD  213 (313)
Q Consensus       211 l~e  213 (313)
                      ..+
T Consensus       287 ~~e  289 (304)
T 3l7y_A          287 NDE  289 (304)
T ss_dssp             GGG
T ss_pred             CCc
Confidence            655

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.35  E-value=5.4e-13  Score=113.40  Aligned_cols=66  Identities=18%  Similarity=0.103  Sum_probs=53.8

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      ..+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++-+.   .+.....++.+..+..+
T Consensus       190 ~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na---~~~~k~~Ad~v~~~~~e  255 (268)
T 3r4c_A          190 VAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNA---SEKVQSVADFVTDTVDN  255 (268)
T ss_dssp             ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHTCSEECCCTTT
T ss_pred             eCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCC---cHHHHHhcCEeeCCCCc
Confidence            3566778999999999999999999999999999999999986554433   44445568888887755

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.35  E-value=4e-12  Score=110.03  Aligned_cols=100  Identities=16%  Similarity=0.052  Sum_probs=84.6

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhh--------cCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~--------~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      .++||+.++|+.|++.|++++++|+.+...   +...+ ++        +|+  +|+.++++++. ..||+|+.+..+++
T Consensus       188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~  263 (301)
T 1ltq_A          188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW  263 (301)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence            458999999999999999999999998543   23445 45        788  58888887765 46899999999999


Q ss_pred             HcCCCCCc-EEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       160 ~~~~~~~~-~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      +++.++.+ |++|||+..|+.+|+++|+.++.|.++
T Consensus       264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence            99877655 799999999999999999999999875

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.34  E-value=7.1e-13  Score=113.85  Aligned_cols=65  Identities=20%  Similarity=0.146  Sum_probs=50.3

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccc--eeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~--~ii~~l~e  213 (313)
                      .+.+++..++.+++++|++++++++|||+.||++|++.+|+.+++-+.   .+.....++  .++.+..+
T Consensus       206 ~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na---~~~vk~~A~~~~v~~sn~e  272 (285)
T 3pgv_A          206 GGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANA---HQRLKDLHPELEVIGSNAD  272 (285)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHCTTSEECCCGGG
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCC---CHHHHHhCCCCEecccCCc
Confidence            566788999999999999999999999999999999999976544433   344444455  35555544

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.32  E-value=2.8e-13  Score=115.55  Aligned_cols=102  Identities=13%  Similarity=0.029  Sum_probs=69.5

Q ss_pred             CCCCEEEEeCCchHHHHHHHHhhcC--CccccceEEecC----CCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 021360          106 HGVPMALASNSHRATIESKISYQHG--WNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  179 (313)
Q Consensus       106 ~g~~~~i~s~~~~~~~~~~l~~~~~--~~~~f~~v~~~~----~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~  179 (313)
                      .++++.++++...  ....+ +.++  +...|+.+.++.    ....+++++..++.+++++|+++++|++|||+.||+.
T Consensus       145 ~~~ki~i~~~~~~--~~~~~-~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~  221 (271)
T 1rlm_A          145 VLFKFSLNLPDEQ--IPLVI-DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAE  221 (271)
T ss_dssp             CEEEEEEECCGGG--HHHHH-HHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             ceEEEEEEcCHHH--HHHHH-HHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHH
Confidence            4456666654432  33333 2222  344566666653    2347888999999999999999999999999999999


Q ss_pred             HHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       180 ~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      |++.+|+.++ +..  ..+.....++.++.+..+
T Consensus       222 m~~~ag~~va-~~n--a~~~~k~~a~~v~~~~~~  252 (271)
T 1rlm_A          222 MLKMARYSFA-MGN--AAENIKQIARYATDDNNH  252 (271)
T ss_dssp             HHHHCSEEEE-CTT--CCHHHHHHCSEECCCGGG
T ss_pred             HHHHcCCeEE-eCC--ccHHHHHhCCeeCcCCCC
Confidence            9999999654 322  223333457788777654

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.29  E-value=6.3e-12  Score=104.23  Aligned_cols=65  Identities=14%  Similarity=0.017  Sum_probs=49.7

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+.+++..++.++++++++++++++|||+.||+.|++.+|+.+. +..  ..+.....++.+..+..+
T Consensus       150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va-~~n--~~~~~k~~a~~v~~~~~~  214 (227)
T 1l6r_A          150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKAC-PAN--ATDNIKAVSDFVSDYSYG  214 (227)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEE-CTT--SCHHHHHHCSEECSCCTT
T ss_pred             CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEE-ecC--chHHHHHhCCEEecCCCC
Confidence            45677889999999999999999999999999999999999644 322  223333457777766543

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.21  E-value=3.2e-13  Score=118.77  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=54.9

Q ss_pred             CCCCCChHHHHHHHHHc----------------------C-----CCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCC
Q 021360          145 RTGKPSPDIFLEAAKRL----------------------N-----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~----------------------~-----~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      ..+||++..|+.+.+.+                      |     .++++++||||+. .|+.+|+++|+.+++|.++..
T Consensus       243 ~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          243 TLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVY  322 (352)
T ss_dssp             ECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSC
T ss_pred             EecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCCC
Confidence            37999999999876543                      2     2679999999999 599999999999999998643


Q ss_pred             ccc---cccccceeecccccc
Q 021360          197 QTH---RYTAADEVINSLLDL  214 (313)
Q Consensus       197 ~~~---~~~~s~~ii~~l~e~  214 (313)
                      ...   ....++.+++++.++
T Consensus       323 ~~~~~~~~~~pd~vi~~l~el  343 (352)
T 3kc2_A          323 NEGDDLKECKPTLIVNDVFDA  343 (352)
T ss_dssp             CTTCCCTTCCCSEECSSHHHH
T ss_pred             CcccccccCCCCEEECCHHHH
Confidence            322   134688888888775

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.19  E-value=9.4e-12  Score=106.99  Aligned_cols=64  Identities=22%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      +-.+...++.+++.+|+++++|++|||+.||+.|++.+|+.+ .+..  ..+.....++.+..+..+
T Consensus       214 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~~--~~~~~~~~a~~v~~~~~~  277 (288)
T 1nrw_A          214 KASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGV-AMGN--AREDIKSIADAVTLTNDE  277 (288)
T ss_dssp             TCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEE-ECTT--CCHHHHHHCSEECCCGGG
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEE-EEcC--CCHHHHhhCceeecCCCc
Confidence            345677899999999999999999999999999999999954 4433  223333357777776644

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.18  E-value=1.2e-12  Score=114.86  Aligned_cols=115  Identities=18%  Similarity=0.140  Sum_probs=72.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC-CC-------------------CCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-EV-------------------RTGKP  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~-~~-------------------~~~kp  149 (313)
                      ..+.+++.++++.+++ |+++.++|+....++.... +..++.   +.+.... ..                   ...++
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~  176 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTA-SMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS  176 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH-HHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccc-hhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence            4678999999999999 9999999988766666555 445552   2222110 00                   00011


Q ss_pred             C---------------hHHHH----------HHHHHcCCCCCc----EEEEecCHhhHHHHHHc----CCeEEEeCCCCC
Q 021360          150 S---------------PDIFL----------EAAKRLNMEPSS----SLVIEDSVIGVVAGKAA----GMEVVAVPSLPK  196 (313)
Q Consensus       150 ~---------------~~~~~----------~~~~~~~~~~~~----~i~vgD~~~Di~~a~~~----G~~~i~v~~~~~  196 (313)
                      .               +..+.          +.....++++++    |++|||+.||+.|++.+    |+.+++ +.   
T Consensus       177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na---  252 (332)
T 1y8a_A          177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG---  252 (332)
T ss_dssp             HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC---
T ss_pred             hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC---
Confidence            0               11111          111111677888    99999999999999999    998766 43   


Q ss_pred             ccccccccceeeccccc
Q 021360          197 QTHRYTAADEVINSLLD  213 (313)
Q Consensus       197 ~~~~~~~s~~ii~~l~e  213 (313)
                      .+.....++.++.+..+
T Consensus       253 ~~~lk~~Ad~v~~~~~~  269 (332)
T 1y8a_A          253 NEYALKHADVVIISPTA  269 (332)
T ss_dssp             CHHHHTTCSEEEECSST
T ss_pred             CHHHHhhCcEEecCCCC
Confidence            23334467787776433

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.14  E-value=5.2e-12  Score=108.30  Aligned_cols=65  Identities=20%  Similarity=0.139  Sum_probs=50.0

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-+++..++.+++++|++++++++|||+.||+.|++.+|+.+. +..  ..+.....++.++.+..+
T Consensus       195 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n--~~~~~~~~a~~v~~~~~~  259 (282)
T 1rkq_A          195 KRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA-VDN--AIPSVKEVANFVTKSNLE  259 (282)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTT--SCHHHHHHCSEECCCTTT
T ss_pred             CCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE-ecC--CcHHHHhhCCEEecCCCc
Confidence            55677899999999999999999999999999999999998543 322  223333357777776544

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.12  E-value=4.7e-10  Score=93.58  Aligned_cols=99  Identities=15%  Similarity=0.272  Sum_probs=71.4

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchH----HHHHHHHhhcCCccccc-eEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRA----TIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~----~~~~~l~~~~~~~~~f~-~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      ...+++||+.++|+.|++.|++++++|+.+..    .....| +.+|+..+++ .++...+    ++.+...+..+.+.|
T Consensus        98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~g  172 (260)
T 3pct_A           98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMG  172 (260)
T ss_dssp             TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTT
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcC
Confidence            35789999999999999999999999988653    666667 7789976663 3444332    233344555555545


Q ss_pred             CCCCcEEEEecCHhhHHH--------HH---------HcCCeEEEeCC
Q 021360          163 MEPSSSLVIEDSVIGVVA--------GK---------AAGMEVVAVPS  193 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~--------a~---------~~G~~~i~v~~  193 (313)
                      .  +-+++|||+.+|+.+        ++         ..|.+.++++.
T Consensus       173 y--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPN  218 (260)
T 3pct_A          173 Y--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPN  218 (260)
T ss_dssp             C--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred             C--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCC
Confidence            4  449999999999987        22         36777777765

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.06  E-value=1.2e-09  Score=91.28  Aligned_cols=99  Identities=15%  Similarity=0.205  Sum_probs=70.4

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCch----HHHHHHHHhhcCCccccc-eEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~----~~~~~~l~~~~~~~~~f~-~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      ...+++||+.++++.|++.|++++++|+.+.    +.....| +.+|+..+++ .++...+   ...+...+..+ .+.|
T Consensus        98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l-~~~G  172 (262)
T 3ocu_A           98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKD---KSAKAARFAEI-EKQG  172 (262)
T ss_dssp             TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESS---CSCCHHHHHHH-HHTT
T ss_pred             CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCC---CCChHHHHHHH-HhcC
Confidence            4578999999999999999999999998865    3566667 7789976652 4444333   12233444444 4445


Q ss_pred             CCCCcEEEEecCHhhHHHH-----------------HHcCCeEEEeCC
Q 021360          163 MEPSSSLVIEDSVIGVVAG-----------------KAAGMEVVAVPS  193 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a-----------------~~~G~~~i~v~~  193 (313)
                      ..  -+++|||..+|+.++                 ...|.+.++++.
T Consensus       173 y~--iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPN  218 (262)
T 3ocu_A          173 YE--IVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPN  218 (262)
T ss_dssp             EE--EEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCC
T ss_pred             CC--EEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCC
Confidence            43  499999999999872                 236777777765

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.05  E-value=6.9e-09  Score=94.36  Aligned_cols=101  Identities=20%  Similarity=0.176  Sum_probs=81.5

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcC-------------CccccceEEecCCCCCCCCChHH--
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSPDI--  153 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~-------------~~~~f~~v~~~~~~~~~kp~~~~--  153 (313)
                      .+...|.+..+|+++++.| ++.++||++..++...+...+|             +.++||.|++..    .||..-.  
T Consensus       244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~  318 (555)
T 2jc9_A          244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEG  318 (555)
T ss_dssp             HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTC
T ss_pred             hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCC
Confidence            3566789999999999999 9999999999999887733335             557899877653    2222111  


Q ss_pred             --------------------------------HHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEeCCC
Q 021360          154 --------------------------------FLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL  194 (313)
Q Consensus       154 --------------------------------~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~-~~G~~~i~v~~~  194 (313)
                                                      +..+++.+|...+++++|||.. .||..++ .+|++++.|.+.
T Consensus       319 ~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE  393 (555)
T 2jc9_A          319 TVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE  393 (555)
T ss_dssp             CCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred             CcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence                                            4778888899999999999999 6999997 999999999884

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.02  E-value=8e-11  Score=100.05  Aligned_cols=65  Identities=17%  Similarity=0.086  Sum_probs=50.6

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+.+++..++.+++++|+++++|++|||+.||+.|++.+|+.+.+-   ...+.....++.++.+..+
T Consensus       187 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~---n~~~~~~~~a~~v~~~~~~  251 (268)
T 1nf2_A          187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME---NAIEKVKEASDIVTLTNND  251 (268)
T ss_dssp             TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT---TSCHHHHHHCSEECCCTTT
T ss_pred             CCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec---CCCHHHHhhCCEEEccCCc
Confidence            5667789999999999999999999999999999999999965432   2223333357777776644

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.00  E-value=2.2e-11  Score=102.94  Aligned_cols=46  Identities=9%  Similarity=-0.066  Sum_probs=41.6

Q ss_pred             CCChHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          148 KPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       148 kp~~~~~~~~~~~~~~~~--~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ++++..++.+++++|+++  +++++|||+.||+.|++.+|+.+++-+.
T Consensus       175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na  222 (259)
T 3zx4_A          175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRG  222 (259)
T ss_dssp             CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSS
T ss_pred             CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCCh
Confidence            788999999999999999  9999999999999999999987655443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.94  E-value=5.6e-11  Score=95.75  Aligned_cols=97  Identities=11%  Similarity=0.096  Sum_probs=85.8

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      ...+||+.++|+.+++. ++++++|++.+.+++..+ +.++...+|+.+++++++...|   +.+.+.++.+|.++++|+
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~v  141 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVI  141 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEE
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEE
Confidence            56789999999999998 999999999999999888 8899999999999998877555   446677789999999999


Q ss_pred             EEecCHhhHHHHHHcCCeEEEe
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +|||++.++.++.++|+.+...
T Consensus       142 ivDDs~~~~~~~~~ngi~i~~~  163 (195)
T 2hhl_A          142 IVDNSPASYIFHPENAVPVQSW  163 (195)
T ss_dssp             EEESCGGGGTTCGGGEEECCCC
T ss_pred             EEECCHHHhhhCccCccEEeee
Confidence            9999999999999999876433

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.94  E-value=1.3e-10  Score=100.48  Aligned_cols=65  Identities=15%  Similarity=0.071  Sum_probs=50.0

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec-cccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN-SLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~-~l~e  213 (313)
                      .+-+++..++.+++.+|++++++++|||+.||+.|++.+|+.++ +..  ..+.....++.++. +..+
T Consensus       221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n--a~~~~k~~a~~v~~~~~~~  286 (301)
T 2b30_A          221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VAN--ATDSAKSHAKCVLPVSHRE  286 (301)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTT--CCHHHHHHSSEECSSCTTT
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcC--CcHHHHhhCCEEEccCCCC
Confidence            55677899999999999999999999999999999999999644 332  22333335777776 6543

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.81  E-value=9.2e-08  Score=85.03  Aligned_cols=93  Identities=15%  Similarity=0.090  Sum_probs=64.6

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc--ceEEecC-----C------------CCCCCCCh
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSD-----E------------VRTGKPSP  151 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f--~~v~~~~-----~------------~~~~kp~~  151 (313)
                      +++|++.++++.|++.|++++++|++...+++.+. +.+|+.-.+  +.|++..     +            +..+.+++
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia-~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~  299 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFA-TDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV  299 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence            36999999999999999999999999999998777 766642111  2222210     0            11223344


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G  185 (313)
                      ..+++++.. ......++++|||.+|+.|.+..+
T Consensus       300 ~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~  332 (385)
T 4gxt_A          300 QTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD  332 (385)
T ss_dssp             HHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred             HHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence            555554432 345567999999999999999753

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.80  E-value=3.9e-10  Score=89.82  Aligned_cols=95  Identities=12%  Similarity=0.090  Sum_probs=83.6

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ...++||+.++|+.+++. +.++++|++...+++..+ +.++...+|+.+++.+++...|   ..+.+.++.+|.++++|
T Consensus        53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~  127 (181)
T 2ght_A           53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRV  127 (181)
T ss_dssp             EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred             EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceE
Confidence            357899999999999998 999999999999999888 8889988999999988776444   34566778899999999


Q ss_pred             EEEecCHhhHHHHHHcCCeE
Q 021360          169 LVIEDSVIGVVAGKAAGMEV  188 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~  188 (313)
                      ++|||++.++.++..+|+.+
T Consensus       128 vivdDs~~~~~~~~~ngi~i  147 (181)
T 2ght_A          128 LILDNSPASYVFHPDNAVPV  147 (181)
T ss_dssp             EEECSCGGGGTTCTTSBCCC
T ss_pred             EEEeCCHHHhccCcCCEeEe
Confidence            99999999999999999974

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.53  E-value=5.9e-07  Score=77.24  Aligned_cols=95  Identities=19%  Similarity=0.143  Sum_probs=64.6

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC----C----------C--CCCCCChH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----E----------V--RTGKPSPD  152 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~----~----------~--~~~kp~~~  152 (313)
                      ..++.||+.++++.|++.|+++.++|++....++..+ +.+|+......+++..    +          .  ...|+.+.
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~-~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~  217 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  217 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHH-HHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH-HHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence            4789999999999999999999999999999998888 7788754322233211    0          0  01222221


Q ss_pred             HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 021360          153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA  184 (313)
Q Consensus       153 ~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~  184 (313)
                      .-......+.-+.++++++||+.||..|++.+
T Consensus       218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l  249 (297)
T 4fe3_A          218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGV  249 (297)
T ss_dssp             HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred             HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence            11112223334567899999999999997744

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=98.52  E-value=4.6e-07  Score=75.59  Aligned_cols=45  Identities=22%  Similarity=0.170  Sum_probs=40.4

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      .+-+++..++.+++++|++++++++|||+.||+.|++.+|+.+.+
T Consensus       159 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~  203 (244)
T 1s2o_A          159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV  203 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred             CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE
Confidence            566778999999999999999999999999999999999986443

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.44  E-value=3.1e-08  Score=84.31  Aligned_cols=45  Identities=7%  Similarity=-0.047  Sum_probs=39.9

Q ss_pred             CCCCChHHHHHHHHHcC-CCCCc--EEEEecCHhhHHHHHHcCCeEEE
Q 021360          146 TGKPSPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~-~~~~~--~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      .+-+++..++.+++.+| +++++  +++|||+.||+.|++.+|+.+.+
T Consensus       186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~  233 (275)
T 1xvi_A          186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV  233 (275)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred             CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe
Confidence            56677899999999999 99999  99999999999999999996433

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.43  E-value=2.9e-06  Score=73.57  Aligned_cols=57  Identities=14%  Similarity=0.166  Sum_probs=43.9

Q ss_pred             CCCHHHHHHHHHHHHHhhh-----------------ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           69 PCAKHEFVNEVYSMFSDHL-----------------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      ..+.+++.....+.+....                 ....++|++.++++.|++.|+.++|+|.++..+++...
T Consensus       104 GmT~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a  177 (327)
T 4as2_A          104 GFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVA  177 (327)
T ss_dssp             TSBHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH
Confidence            3456666666655554321                 12368999999999999999999999999999998776

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=98.41  E-value=7.2e-06  Score=73.77  Aligned_cols=105  Identities=15%  Similarity=0.126  Sum_probs=78.2

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc--------CCccccceEEecCCCC----------------
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDEVR----------------  145 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--------~~~~~f~~v~~~~~~~----------------  145 (313)
                      +...|.+..+|++|++.|.++.++|||+-.++...+.-.+        .+.++||.|++...-+                
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~  264 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  264 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence            4456899999999999999999999999999877663323        5788999998853200                


Q ss_pred             --------CCCCC---hHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEeCCC
Q 021360          146 --------TGKPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSL  194 (313)
Q Consensus       146 --------~~kp~---~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~-~~G~~~i~v~~~  194 (313)
                              ..+|.   ......+.+.+|....+|++|||+. .|+..++ ..||+++.|.+.
T Consensus       265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E  326 (470)
T 4g63_A          265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE  326 (470)
T ss_dssp             CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred             CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence                    00010   1123445567788899999999999 6987776 469999999884

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.35  E-value=2.9e-08  Score=79.93  Aligned_cols=94  Identities=13%  Similarity=0.069  Sum_probs=73.7

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc-cccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ....||+.++|+.+. .++.+++.|.+...+++.++ +.++.. .+|+..+..+.+....+   .+.+.+..+|.++++|
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~~g---~y~KdL~~Lgrdl~~v  132 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYKDG---VHIKDLSKLNRDLSKV  132 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEETT---EEECCGGGSCSCGGGE
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEECC---eeeecHHHhCCChHHE
Confidence            468899999999998 56999999999999999888 778876 47887777666543221   2445567789999999


Q ss_pred             EEEecCHhhHHHHHHcCCeE
Q 021360          169 LVIEDSVIGVVAGKAAGMEV  188 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~  188 (313)
                      ++|+|++.........|+.+
T Consensus       133 IiIDDsp~~~~~~p~N~I~I  152 (204)
T 3qle_A          133 IIIDTDPNSYKLQPENAIPM  152 (204)
T ss_dssp             EEEESCTTTTTTCGGGEEEC
T ss_pred             EEEECCHHHHhhCccCceEe
Confidence            99999999887666666543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.22  E-value=1.6e-07  Score=82.63  Aligned_cols=93  Identities=15%  Similarity=0.154  Sum_probs=69.0

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc-ccc-eEEecCCCCCCCCChHHHHHHHHHc-CCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEP  165 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~-~v~~~~~~~~~kp~~~~~~~~~~~~-~~~~  165 (313)
                      .+...||+.++|+.+. .++.++++|++...++..++ +.++... +|+ .+++.++++.      .+.+.+.++ |.++
T Consensus        73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl  144 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDT  144 (372)
T ss_dssp             EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCC
T ss_pred             EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCC
Confidence            4678999999999999 56999999999999999888 7788776 676 5666665532      112233444 8899


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ++|++|+|++.-...-   . ..+.|.+
T Consensus       145 ~~viiiDd~~~~~~~~---p-N~I~i~~  168 (372)
T 3ef0_A          145 SMVVVIDDRGDVWDWN---P-NLIKVVP  168 (372)
T ss_dssp             TTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred             ceEEEEeCCHHHcCCC---C-cEeeeCC
Confidence            9999999999644332   2 4566655

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.99  E-value=2.9e-05  Score=73.77  Aligned_cols=103  Identities=12%  Similarity=0.134  Sum_probs=74.7

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++.+.++.|++.|++++++|+.+...+.... +.+|+.    .++..-   .+..+.+.+    +++.-. ++++
T Consensus       456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~----~~~~~~---~P~~K~~~v----~~l~~~-~~v~  522 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAEV---LPHQKSEEV----KKLQAK-EVVA  522 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECSC---CTTCHHHHH----HHHTTT-CCEE
T ss_pred             CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC----EEEEeC---CHHhHHHHH----HHHhhC-CeEE
Confidence            368899999999999999999999999999888777 888984    443321   122333333    333334 8999


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceee
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI  208 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii  208 (313)
                      ++||+.||+.|.+.+|+.+.+- .+  .+.....++.+.
T Consensus       523 ~vGDg~ND~~al~~A~vgiamg-~g--~~~a~~~AD~vl  558 (645)
T 3j08_A          523 FVGDGINDAPALAQADLGIAVG-SG--SDVAVESGDIVL  558 (645)
T ss_dssp             EEECSSSCHHHHHHSSEEEEEC-CC--SCCSSCCSSSEE
T ss_pred             EEeCCHhHHHHHHhCCEEEEeC-CC--cHHHHHhCCEEE
Confidence            9999999999999999766554 22  223334677776

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.85  E-value=7.8e-05  Score=71.75  Aligned_cols=104  Identities=12%  Similarity=0.128  Sum_probs=74.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++.+.++.|++.|++++++|+.+...+.... +.+|+    +.++..-   .+..+.+.+    +++.-. ++++
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia-~~lgi----~~~~~~~---~P~~K~~~v----~~l~~~-~~v~  600 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNL----DLVIAEV---LPHQKSEEV----KKLQAK-EVVA  600 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTC----SEEECSC---CTTCHHHHH----HHHTTT-CCEE
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCC----cEEEccC---CHHHHHHHH----HHHhcC-CeEE
Confidence            368899999999999999999999999998888777 88898    4443321   122233333    333333 8899


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      ++||+.||..|.+.+++.+.+- .  ..+.....++.+..
T Consensus       601 ~vGDg~ND~~al~~A~vgiamg-~--g~~~a~~~AD~vl~  637 (723)
T 3j09_A          601 FVGDGINDAPALAQADLGIAVG-S--GSDVAVESGDIVLI  637 (723)
T ss_dssp             EEECSSTTHHHHHHSSEEEECC-C--CSCCSSCCSSEECS
T ss_pred             EEECChhhHHHHhhCCEEEEeC-C--CcHHHHHhCCEEEe
Confidence            9999999999999999765433 2  22333446777763

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.78  E-value=4.7e-05  Score=57.40  Aligned_cols=39  Identities=18%  Similarity=0.034  Sum_probs=29.3

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCC
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGW  131 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~  131 (313)
                      +.|++.+.|+.+++.|+.++++|+.+...   +...+ +..++
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l-~~~gi   66 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGL   66 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH-HHcCC
Confidence            44688999999999999999999987433   33344 55666

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.76  E-value=3.9e-05  Score=73.70  Aligned_cols=105  Identities=13%  Similarity=0.050  Sum_probs=77.3

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      -++.|++.+.++.|++.|++++++|+.+...+.... +.+|+.    .++..       -.|+...++++.+.-..+.++
T Consensus       553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia-~~lgi~----~v~a~-------~~P~~K~~~v~~l~~~g~~V~  620 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA-GTLGIK----KVVAE-------IMPEDKSRIVSELKDKGLIVA  620 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HHHTCC----CEECS-------CCHHHHHHHHHHHHHHSCCEE
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCC----EEEEe-------cCHHHHHHHHHHHHhcCCEEE
Confidence            367899999999999999999999999998888777 888984    33321       123444455555444567899


Q ss_pred             EEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      |+||+.||..|.+.+++.+.+-+ +  .+.....++.+..
T Consensus       621 ~vGDG~ND~paL~~AdvGIAmg~-g--~d~a~~~AD~vl~  657 (736)
T 3rfu_A          621 MAGDGVNDAPALAKADIGIAMGT-G--TDVAIESAGVTLL  657 (736)
T ss_dssp             EEECSSTTHHHHHHSSEEEEESS-S--CSHHHHHCSEEEC
T ss_pred             EEECChHhHHHHHhCCEEEEeCC-c--cHHHHHhCCEEEc
Confidence            99999999999999998765542 2  2333445677664

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=97.73  E-value=4e-05  Score=76.49  Aligned_cols=116  Identities=14%  Similarity=0.018  Sum_probs=76.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc----ceEEecCCCCCC----------------CC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDEVRTG----------------KP  149 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f----~~v~~~~~~~~~----------------kp  149 (313)
                      -++.|++.+.++.|++.|++++++|+.....+.... +.+|+....    +.++.+.+...-                .-
T Consensus       602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia-~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~  680 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV  680 (995)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred             CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence            367899999999999999999999999998887777 778885432    123333211110                00


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeec
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN  209 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~  209 (313)
                      .|+...++.+.+.-..+.++++||+.||..|.+.+++.+.+- .+.  +.....++.+..
T Consensus       681 ~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~--~~ak~aAd~vl~  737 (995)
T 3ar4_A          681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGT--AVAKTASEMVLA  737 (995)
T ss_dssp             CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSC--HHHHHTCSEEET
T ss_pred             CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCC--HHHHHhCCEEEC
Confidence            122333333333333578999999999999999999977653 322  222335666663

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.54  E-value=6.3e-06  Score=71.03  Aligned_cols=95  Identities=12%  Similarity=0.122  Sum_probs=63.9

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccc--cceEEecCCCC-C---CCCChHHHHHHHHHc---
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--FSVIVGSDEVR-T---GKPSPDIFLEAAKRL---  161 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~--f~~v~~~~~~~-~---~kp~~~~~~~~~~~~---  161 (313)
                      ...|++.++|+.+.+. |.+++.|.+...++..++ +.++....  |...+..+.+. .   .+..+..+.+-+..+   
T Consensus       164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~  241 (320)
T 3shq_A          164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL  241 (320)
T ss_dssp             HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred             EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence            4688999999999965 999999999999999888 76766544  22222222211 0   011111122233444   


Q ss_pred             --CCCCCcEEEEecCHhhHHHHHHcCCe
Q 021360          162 --NMEPSSSLVIEDSVIGVVAGKAAGME  187 (313)
Q Consensus       162 --~~~~~~~i~vgD~~~Di~~a~~~G~~  187 (313)
                        |.+++++++|+|++.-.......|+.
T Consensus       242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~  269 (320)
T 3shq_A          242 YKQYNSSNTIMFDDIRRNFLMNPKSGLK  269 (320)
T ss_dssp             CTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred             cCCCChhHEEEEeCChHHhccCcCceEE
Confidence              78999999999999888777666653

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.54  E-value=0.00012  Score=60.90  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=24.2

Q ss_pred             hHHHHHHHHHHCCCCEEEEeCCchHHHHHHH
Q 021360           95 GANRLIKHLSCHGVPMALASNSHRATIESKI  125 (313)
Q Consensus        95 gv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l  125 (313)
                      ...+.|++++++|++++++|+++...+...+
T Consensus        25 ~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l   55 (246)
T 3f9r_A           25 EMRALIKRARGAGFCVGTVGGSDFAKQVEQL   55 (246)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence            4556799999999999999999877654444

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.54  E-value=6.2e-05  Score=55.73  Aligned_cols=29  Identities=3%  Similarity=0.047  Sum_probs=24.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRA  119 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~  119 (313)
                      .+.+++.+.++++++.|++++++|+.+..
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            45567889999999999999999988653

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.42  E-value=0.00029  Score=70.50  Aligned_cols=116  Identities=16%  Similarity=0.099  Sum_probs=74.2

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccc------------------------cceEEecCCC--
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV--  144 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~------------------------f~~v~~~~~~--  144 (313)
                      ++.|++.+.++.|++.|++++++|+.....+.... +.+|+...                        +..++.+.+.  
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~  677 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD  677 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence            46799999999999999999999999988887766 77787521                        0112222111  


Q ss_pred             ----------------CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceee
Q 021360          145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI  208 (313)
Q Consensus       145 ----------------~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii  208 (313)
                                      -.....|+....+.+.+.-..+.+.++||+.||+.|.+.+++.+.+-..+.  +.....++.+.
T Consensus       678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gt--d~ak~aAD~Vl  755 (1028)
T 2zxe_A          678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGS--DVSKQAADMIL  755 (1028)
T ss_dssp             CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCC--HHHHHHCSEEE
T ss_pred             CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccC--HHHHHhcCEEe
Confidence                            011223343333333322223679999999999999999999876532222  22223466655


Q ss_pred             c
Q 021360          209 N  209 (313)
Q Consensus       209 ~  209 (313)
                      .
T Consensus       756 ~  756 (1028)
T 2zxe_A          756 L  756 (1028)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.18  E-value=0.0012  Score=66.10  Aligned_cols=119  Identities=14%  Similarity=0.063  Sum_probs=75.0

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc------------------------ceEEecCCCC
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEVR  145 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f------------------------~~v~~~~~~~  145 (313)
                      -++.|++.+.++.+++.|++++++|+.+...+.... +.+|+...-                        ..++.+.+..
T Consensus       603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~  681 (1034)
T 3ixz_A          603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA-ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK  681 (1034)
T ss_pred             CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence            367899999999999999999999999988887666 667763210                        1122221100


Q ss_pred             ------------------CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccccccccee
Q 021360          146 ------------------TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV  207 (313)
Q Consensus       146 ------------------~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~i  207 (313)
                                        ...-.|+....+.+.+.-....++++||+.||+.|.+.+|+.+.+-..+  .+.....++.+
T Consensus       682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng--~d~aK~aAD~V  759 (1034)
T 3ixz_A          682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAG--SDAAKNAADMI  759 (1034)
T ss_pred             hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCcc--CHHHHHhcCEE
Confidence                              1111233333333333223456999999999999999999977654222  22233456666


Q ss_pred             eccc
Q 021360          208 INSL  211 (313)
Q Consensus       208 i~~l  211 (313)
                      ..+-
T Consensus       760 l~~~  763 (1034)
T 3ixz_A          760 LLDD  763 (1034)
T ss_pred             eccC
Confidence            6543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.13  E-value=0.00056  Score=56.80  Aligned_cols=35  Identities=20%  Similarity=0.172  Sum_probs=26.9

Q ss_pred             HHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc
Q 021360           97 NRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  132 (313)
Q Consensus        97 ~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~  132 (313)
                      .+.|+++++.|+.++++|+.+...+...+ +.+++.
T Consensus        23 ~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~-~~~~~~   57 (249)
T 2zos_A           23 KPIIEELKDMGFEIIFNSSKTRAEQEYYR-KELEVE   57 (249)
T ss_dssp             HHHHHHHHHTTEEEEEBCSSCHHHHHHHH-HHHTCC
T ss_pred             HHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCC
Confidence            35677788889999999998887777666 566663

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.12  E-value=0.00016  Score=60.23  Aligned_cols=63  Identities=5%  Similarity=-0.158  Sum_probs=46.8

Q ss_pred             CCCChHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          147 GKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~-~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      +-.+...++.+++.+++ +++++++|||+.||++|.+.+|+.+.+-+. . .+.....++.+.++.
T Consensus       177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna-~-~~~~~~~a~~v~~~~  240 (249)
T 2zos_A          177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL-K-HKKAQNVSSIIDVLE  240 (249)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC-C-CTTEEEESSHHHHHH
T ss_pred             CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCC-C-ccccchhceEEeccc
Confidence            45567899999999998 999999999999999999999997655332 1 122222456655544

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=96.93  E-value=0.0016  Score=64.02  Aligned_cols=98  Identities=10%  Similarity=0.067  Sum_probs=66.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc---c-eEEecC---------------C-CCCCCCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---S-VIVGSD---------------E-VRTGKPS  150 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f---~-~v~~~~---------------~-~~~~kp~  150 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+....   + .++.+.               + +..-.| 
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA-~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P-  612 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS-RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP-  612 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS-
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH-HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH-
Confidence            57899999999999999999999999988887776 778885311   0 011110               0 111222 


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                       +.-.++.+.+.-..+.+.|+||+.||..|.+.+++.+.+-
T Consensus       613 -~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg  652 (920)
T 1mhs_A          613 -QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE  652 (920)
T ss_dssp             -THHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET
T ss_pred             -HHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc
Confidence             2222333322222378999999999999999999987664

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=96.79  E-value=0.0011  Score=65.09  Aligned_cols=99  Identities=15%  Similarity=0.072  Sum_probs=66.3

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc--ceEEecCCC-----------------CCCCCCh
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEV-----------------RTGKPSP  151 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f--~~v~~~~~~-----------------~~~kp~~  151 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+....  ..++.+.+.                 -...-.|
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA-~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P  566 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP  566 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHH-HTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHH-HHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence            56899999999999999999999999988877666 778884210  011111100                 0112233


Q ss_pred             HHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       152 ~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      +.-.++.+.+.-..+.+.|+||+.||..|.+.+++.+.+
T Consensus       567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm  605 (885)
T 3b8c_A          567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV  605 (885)
T ss_dssp             HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe
Confidence            333333333222236799999999999999999987655

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.32  E-value=0.0041  Score=51.20  Aligned_cols=39  Identities=8%  Similarity=0.029  Sum_probs=29.6

Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCeEEEeCC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPS  193 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~--G~~~i~v~~  193 (313)
                      +...++.+++.+|     +++|||+.||++|.+.+  |..+.+-+.
T Consensus       161 Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na  201 (239)
T 1u02_A          161 KGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG  201 (239)
T ss_dssp             HHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS
T ss_pred             HHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC
Confidence            3445555555555     89999999999999999  987766544

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.24  E-value=0.0013  Score=54.48  Aligned_cols=43  Identities=9%  Similarity=-0.167  Sum_probs=31.8

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEe
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD----~~~Di~~a~~~G~~~i~v  191 (313)
                      .+-.+...++.+   +|++++++++|||    +.||++|.+.+|...+.+
T Consensus       185 ~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av  231 (246)
T 2amy_A          185 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV  231 (246)
T ss_dssp             TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred             CCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence            344445666666   8999999999999    999999999988744444

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.89  E-value=0.0021  Score=53.69  Aligned_cols=60  Identities=5%  Similarity=-0.196  Sum_probs=41.8

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD----~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      .+-.+...++.+   +|++++++++|||    +.||++|.+.+|...+.+.  ...+.....++.+..+
T Consensus       194 ~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~--NA~~~~k~~a~~v~~~  257 (262)
T 2fue_A          194 EGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV--SPQDTVQRCREIFFPE  257 (262)
T ss_dssp             TTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS--SHHHHHHHHHHHHCTT
T ss_pred             CCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec--CCCHHHHHhhheeCCC
Confidence            444556778777   8999999999999    9999999999997444552  2233333344554443

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.13  E-value=0.011  Score=49.34  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=24.1

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG   39 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g   39 (313)
                      .++|+|+||+||||++....+.+...++++++.
T Consensus        11 ~~~kli~~DlDGTLl~~~~~is~~~~~al~~l~   43 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQKIDPEVAAFLQKLR   43 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSCCCHHHHHHHHHHT
T ss_pred             cCeEEEEEeCccCCCCCCCcCCHHHHHHHHHHH
Confidence            468999999999999987656555666666653

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=94.85  E-value=0.034  Score=45.61  Aligned_cols=14  Identities=57%  Similarity=0.869  Sum_probs=12.3

Q ss_pred             ccEEEEecCCcccc
Q 021360            9 MSCVILDLDGTLLN   22 (313)
Q Consensus         9 ~k~vifDlDGTL~d   22 (313)
                      +|+|+||+||||++
T Consensus         1 ikli~~DlDGTLl~   14 (239)
T 1u02_A            1 MSLIFLDYDGTLVP   14 (239)
T ss_dssp             -CEEEEECBTTTBC
T ss_pred             CeEEEEecCCCCcC
Confidence            57899999999997

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=93.58  E-value=0.3  Score=42.46  Aligned_cols=86  Identities=20%  Similarity=0.169  Sum_probs=60.0

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCc
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS  167 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~---~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~  167 (313)
                      .++|++.+.++.|++.|+++.++||++.   +.....+.+.+|+....+.|+++.....     ..    +.    ..+.
T Consensus        29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~-----~~----~~----~~~~   95 (352)
T 3kc2_A           29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYK-----SL----VN----KYSR   95 (352)
T ss_dssp             EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGG-----GG----TT----TCSE
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHH-----HH----Hh----cCCE
Confidence            3668999999999999999999999852   3333455346888766677877654221     11    11    2367


Q ss_pred             EEEEecCHhhHHHHHHcCCeEEE
Q 021360          168 SLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       168 ~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      ++++|-. .-.+.++++|++.+.
T Consensus        96 v~viG~~-~l~~~l~~~G~~~v~  117 (352)
T 3kc2_A           96 ILAVGTP-SVRGVAEGYGFQDVV  117 (352)
T ss_dssp             EEEESST-THHHHHHHHTCSEEE
T ss_pred             EEEECCH-HHHHHHHhCCCeEec
Confidence            8888865 556778899998775

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=93.40  E-value=0.057  Score=48.21  Aligned_cols=93  Identities=14%  Similarity=0.106  Sum_probs=66.1

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcc-ccce-EEecCCCCCCCCChHHHHHHHHH-cCCCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSV-IVGSDEVRTGKPSPDIFLEAAKR-LNMEP  165 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~-~f~~-v~~~~~~~~~kp~~~~~~~~~~~-~~~~~  165 (313)
                      .+...||+.++|+.+.+ .|.++++|.+...++..++ +.+.... +|.. +++.++++..      +.+-+.+ +|.+.
T Consensus        81 ~V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl-~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl  152 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT  152 (442)
T ss_dssp             EEEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHH-HHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred             EEEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHH-HHhccCCccccceEEEecCCCCc------eeeehHHhcCCCc
Confidence            46789999999999995 5999999999999999888 7777665 5665 6656655421      1111232 48899


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +++++|+|++.-...-   . ..+.|.+
T Consensus       153 ~~vvIIDd~p~~~~~~---p-N~I~I~~  176 (442)
T 3ef1_A          153 SMVVVIDDRGDVWDWN---P-NLIKVVP  176 (442)
T ss_dssp             TTEEEEESCSGGGTTC---T-TEEECCC
T ss_pred             ceEEEEECCHHHhCCC---C-CEEEcCC
Confidence            9999999998533221   2 4556655

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=92.08  E-value=1.3  Score=36.02  Aligned_cols=92  Identities=14%  Similarity=0.181  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHhhcCCccccc--eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEe
Q 021360           96 ANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE  172 (313)
Q Consensus        96 v~e~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~--~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vg  172 (313)
                      +...|.....+ +.--+++|++.--..-.++ -.+++...|.  -|+++-.    -++...|+++.+++| +...-++||
T Consensus       164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~-LLygL~~~fpieNIYSa~k----iGKesCFerI~~RFG-~k~~yvvIG  237 (274)
T 3geb_A          164 SLKALNLINSRPNCVNVLVTTTQLIPALAKV-LLYGLGSVFPIENIYSATK----TGKESCFERIMQRFG-RKAVYVVIG  237 (274)
T ss_dssp             HHHHHHHHHHSTTEEEEEEESSCHHHHHHHH-HHTTCTTTSCGGGEEETTT----TCHHHHHHHHHHHHC-TTSEEEEEE
T ss_pred             HHHHHHhhccCCceeEEEEecCchHHHHHHH-HHhhcccceecccccchhh----cCHHHHHHHHHHHhC-CCceEEEEC
Confidence            34445455443 2334566666433222223 3467766554  4666543    346689999999997 556778899


Q ss_pred             cCHhhHHHHHHcCCeEEEeCC
Q 021360          173 DSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       173 D~~~Di~~a~~~G~~~i~v~~  193 (313)
                      |+...-++|+..++++.-+..
T Consensus       238 DG~eEe~AAk~~n~PFwrI~~  258 (274)
T 3geb_A          238 DGVEEEQGAKKHNMPFWRISC  258 (274)
T ss_dssp             SSHHHHHHHHHTTCCEEECCS
T ss_pred             CCHHHHHHHHHcCCCeEEeec
Confidence            999999999999999988866

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=91.27  E-value=0.064  Score=44.00  Aligned_cols=33  Identities=24%  Similarity=0.344  Sum_probs=25.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcC
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG   39 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g   39 (313)
                      +++|+|+||+||||+++...+.+...++++++.
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~   36 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDFLQKLR   36 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHHHHHHT
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHHHHHHH
Confidence            467999999999999987666566666666653

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=88.29  E-value=1.7  Score=35.53  Aligned_cols=84  Identities=27%  Similarity=0.361  Sum_probs=55.2

Q ss_pred             CchHHHHHHHHHHCCCCEEEEeCCchHHHH---HHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           93 LPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        93 ~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      .|++.+.++++++.|++++++|+.+.....   ..+ +.+|+....+.++++.         ......+++. .+..+++
T Consensus        19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l-~~lg~~~~~~~i~~~~---------~~~~~~l~~~-~~~~~v~   87 (263)
T 1zjj_A           19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL-LKMGIDVSSSIIITSG---------LATRLYMSKH-LDPGKIF   87 (263)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH-HTTTCCCCGGGEEEHH---------HHHHHHHHHH-SCCCCEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEEecH---------HHHHHHHHHh-CCCCEEE
Confidence            368889999999999999999988653333   334 3567755455666542         2333344443 3446788


Q ss_pred             EEecCHhhHHHHHHcCCeE
Q 021360          170 VIEDSVIGVVAGKAAGMEV  188 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~~~  188 (313)
                      ++|+. .....++..|+..
T Consensus        88 viG~~-~l~~~l~~~G~~~  105 (263)
T 1zjj_A           88 VIGGE-GLVKEMQALGWGI  105 (263)
T ss_dssp             EESCH-HHHHHHHHHTSCB
T ss_pred             EEcCH-HHHHHHHHcCCee
Confidence            88874 5666778888754

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=87.99  E-value=0.39  Score=42.32  Aligned_cols=72  Identities=17%  Similarity=0.240  Sum_probs=40.2

Q ss_pred             ccEEEEecCCccccChHHHHHHHH---HHHHH---cCCCC-------Chhhhhh----hcCCCHHHHHHHHHHHhCCCCC
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLK---TFLVK---YGKEW-------DGREKHK----IVGKTPLEEAAIIVEDYGLPCA   71 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~---~~~~~---~g~~~-------~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~   71 (313)
                      ||.|+||+|||+++.+..+..+..   +++..   +|+..       +.+.++.    .+...   .+-..++..|+..+
T Consensus         1 ~~~~~fdvdgv~~~~~~~~d~~~ltv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~lk~~g~n~n   77 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERCFDVSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKD---KILNKLKSLGLNSN   77 (384)
T ss_dssp             CCEEEECSBTTTBCSHHHHHHHHHHHHHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTT---HHHHHHHHTTCCCH
T ss_pred             CceEEEecCceeechhhhccHHHHHHHHHHcCccccCCCccCCcCCCcHHHHHHHHHHHhccH---HHHHHHHHcccccC
Confidence            588999999999999877755533   23333   34332       1222211    11111   22455677788777


Q ss_pred             HHHHHHHHHHHH
Q 021360           72 KHEFVNEVYSMF   83 (313)
Q Consensus        72 ~~~~~~~~~~~~   83 (313)
                      ++.+.-.+.-.+
T Consensus        78 wd~~~~~f~~~~   89 (384)
T 1qyi_A           78 WDMLFIVFSIHL   89 (384)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             CchhHHHHHHHH
Confidence            776655554444

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=84.31  E-value=1.4  Score=36.16  Aligned_cols=49  Identities=18%  Similarity=0.240  Sum_probs=36.9

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeC---CchHHHHHHHHhhcCCccccceEEec
Q 021360           92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGS  141 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~~~~~f~~v~~~  141 (313)
                      +.|++.+.|++++++|++++++|+   .+...+...+ +.+|+....+.++++
T Consensus        25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l-~~lg~~~~~~~ii~~   76 (268)
T 3qgm_A           25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERL-RSFGLEVGEDEILVA   76 (268)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHH-HHTTCCCCGGGEEEH
T ss_pred             eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHH-HHCCCCCCHHHeeCH
Confidence            457888999999999999999999   4555555566 677876555556554

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=82.96  E-value=0.34  Score=39.73  Aligned_cols=43  Identities=7%  Similarity=-0.186  Sum_probs=32.2

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecC----HhhHHHHHHcCCeEEEeC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS----VIGVVAGKAAGMEVVAVP  192 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~----~~Di~~a~~~G~~~i~v~  192 (313)
                      .+-.+...++.+++    +++++++|||+    .||++|.+.+|...+.+.
T Consensus       184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~  230 (246)
T 3f9r_A          184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT  230 (246)
T ss_dssp             TTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred             CCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence            33444566777665    89999999996    999999998876444553

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=82.81  E-value=0.42  Score=37.76  Aligned_cols=18  Identities=39%  Similarity=0.687  Sum_probs=15.3

Q ss_pred             cCccEEEEecCCccccCh
Q 021360            7 KLMSCVILDLDGTLLNTD   24 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~   24 (313)
                      ...+++++|||+||+++.
T Consensus        26 ~~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TTCCEEEECCBTTTEEEE
T ss_pred             CCCeEEEEccccceEccc
Confidence            356899999999999874

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=80.39  E-value=2.9  Score=34.14  Aligned_cols=46  Identities=15%  Similarity=0.255  Sum_probs=33.2

Q ss_pred             chHHHHHHHHHHCCCCEEEEeC---CchHHHHHHHHhhcCCccccceEEe
Q 021360           94 PGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVG  140 (313)
Q Consensus        94 pgv~e~l~~l~~~g~~~~i~s~---~~~~~~~~~l~~~~~~~~~f~~v~~  140 (313)
                      |++.+.|++++++|++++++|+   .+...+...+ +.+|+....+.+++
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l-~~lg~~~~~~~ii~   73 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL-VSFDIPATEEQVFT   73 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHH-HHTTCCCCGGGEEE
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHHHccC
Confidence            3677899999999999999998   4445555566 66777544455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	313
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	2e-20
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	1e-19
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	2e-19
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	5e-19
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	1e-18
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	7e-18
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	1e-17
d1n08a_	154	b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Sc	1e-16
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	1e-16
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	2e-16
d1nb9a_	147	b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapie	7e-16
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	1e-15
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	2e-15
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	8e-15
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	1e-14
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	2e-14
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	2e-14
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	7e-14
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	1e-13
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	1e-13
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	4e-13
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	3e-10
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	5e-10
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	1e-09
d1mrza1	130	b.43.5.1 (A:159-288) Riboflavin kinase domain of b	1e-08
d1j97a_	210	c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon	5e-06
d2fpwa1	161	c.108.1.19 (A:3-163) Histidine biosynthesis bifunc	2e-05
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	2e-04
d1yv9a1	253	c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En	0.001
d2o2xa1	209	c.108.1.19 (A:8-216) Hypothetical protein Mll2559	0.001
d2c4na1	250	c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId	0.001
d1wvia_	253	c.108.1.14 (A:) Putative phosphatase SMU.1415c {St	0.003

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 85.2 bits (209), Expect = 2e-20
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 10/188 (5%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVED 65
            I DL   +++ D  F+ VL  +           +K   +G+   +            E 
Sbjct: 3   YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA 60

Query: 66  YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
                A      +    +      ++  P    ++  L   G  + + SN++R       
Sbjct: 61  LCHEMALPLSYEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118

Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
                  ++   I  S ++   KP   I+    +     PS ++  +D+   +      G
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLG 178

Query: 186 MEVVAVPS 193
           +  + V  
Sbjct: 179 ITSILVKD 186

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 83.7 bits (205), Expect = 1e-19
 Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 3/209 (1%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLP 69
            I D+DG L++++ ++       +   G +   R      +  +  +             
Sbjct: 6   AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 65

Query: 70  CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
            ++ E V  V +     + + + L    R    L      +   +++    +  K+    
Sbjct: 66  PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 125

Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
              +SF  +  ++++   KP P ++L+ A +L ++P + + +EDSV G++A KAA M  +
Sbjct: 126 DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI 185

Query: 190 AVPSLPKQTH-RYTAADEVINSLLDLRPE 217
            VP+   Q   R+  A+  ++SL +L  +
Sbjct: 186 VVPAPEAQNDPRFVLANVKLSSLTELTAK 214

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (206), Expect = 2e-19
 Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 40/243 (16%)

Query: 12  VILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPL-------- 56
           ++LD++GT                E +K +L  + +E + ++   ++ K           
Sbjct: 10  ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGA 69

Query: 57  ------------------EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-----KVKAL 93
                             +     V        K   + ++              K +  
Sbjct: 70  VPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFF 129

Query: 94  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
                 ++     G+ + + S+      +    +    +    V    D     K   + 
Sbjct: 130 ADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES 189

Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSL 211
           + + A  +    ++ L + D      A + A + V  V  P     T        +I S 
Sbjct: 190 YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSF 249

Query: 212 LDL 214
            +L
Sbjct: 250 SEL 252

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.1 bits (201), Expect = 5e-19
 Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 24/203 (11%)

Query: 12  VILDLDGTLLNTD------------GMFSEVLKTFLVKYGKE------WDGREKHKIVGK 53
              DLDG L                 +  + L         E        G+        
Sbjct: 3   AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62

Query: 54  TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
              E      +  G    ++  +++++S                +    L   G    + 
Sbjct: 63  LMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQAAIALKKKGFTTCIV 119

Query: 114 SNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
           +N+     + + S        ++ F  ++ S +V   KP P I+      L  +P+  + 
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179

Query: 171 IEDSVIGVVAGKAAGMEVVAVPS 193
           ++D    +   +  GM  + V +
Sbjct: 180 LDDFGSNLKPARDMGMVTILVHN 202

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 80.7 bits (197), Expect = 1e-18
 Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 6/209 (2%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
           +I D DG L++++ + ++V    L + G      E  +       +   + VE       
Sbjct: 5   IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64

Query: 72  KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
               +++   +    L +   +    +           +   S+SHR  +         +
Sbjct: 65  SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124

Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
                           KP PDIFL  A +  + P   +V+EDSV G+   +AAGM V+  
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184

Query: 192 PS------LPKQTHRYTAADEVINSLLDL 214
                             A+ VI+ + DL
Sbjct: 185 TGASHTYPSHADRLTDAGAETVISRMQDL 213

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 78.7 bits (192), Expect = 7e-18
 Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 14/214 (6%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
            V+ DLDG + +T        K    + G     R+ ++ +     E++   + D     
Sbjct: 4   AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK 63

Query: 71  AKHEFV-------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
              E         N+ Y      +      PG  +L+K L  + + +ALAS S       
Sbjct: 64  VSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN---GP 120

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
            +  +      F  I    EV   KP+PDIF+ AA  + + PS S+ +EDS  G+ A K 
Sbjct: 121 FLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180

Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217
           +G   + V               ++        E
Sbjct: 181 SGALPIGVGR----PEDLGDDIVIVPDTSHYTLE 210

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (190), Expect = 1e-17
 Identities = 34/206 (16%), Positives = 58/206 (28%), Gaps = 24/206 (11%)

Query: 9   MSCVILDLDGTLLNTD------------GMFSEVLKTFLVKYGKEWD------GREKHKI 50
           +   + DLDG L                 +   +L     K G E        G      
Sbjct: 2   LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61

Query: 51  VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
                 E      E   +   K+  + E+   F   +   K      +    L   G   
Sbjct: 62  WIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPMLQAALMLRKKGFTT 118

Query: 111 ALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167
           A+ +N+       +             F  ++ S +V   KP P I+      L   PS 
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178

Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193
            + ++D    +   +  GM  + V  
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQD 204

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 154

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 73.9 bits (181), Expect = 1e-16
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 215 RPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP 274
           RPE  G     + ++      P    G VV G GRGSK LGIPTAN+S +   ++L    
Sbjct: 1   RPEIVG----PEKVQ---SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD 53

Query: 275 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIV 310
           SGVYFG+  +  + V+ MVMS+GWNPY+ N  ++  
Sbjct: 54  SGVYFGY-AMVQKRVFPMVMSVGWNPYYKNKLRSAE 88

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 76.0 bits (185), Expect = 1e-16
 Identities = 36/247 (14%), Positives = 71/247 (28%), Gaps = 41/247 (16%)

Query: 9   MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
           +  VI    GT ++       EV      K G      E  K +G   ++    + E   
Sbjct: 2   IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61

Query: 68  LPCAKHEFVNEVYSMFSDHLC--------------KVKALPGANRLIKHLSCHGVPMALA 113
           +    +    ++ +                         + G   +I  L   G+ +   
Sbjct: 62  IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121

Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIE 172
           +   R  ++               +V  D+V  G+P P +  + A  L     +  + + 
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 181

Query: 173 DSVIGVVAGKAAGMEVVAV-------------------------PSLPKQTHRYTAADEV 207
           D+V  +  G+ AGM  V V                           + +       A   
Sbjct: 182 DTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241

Query: 208 INSLLDL 214
           I ++ +L
Sbjct: 242 IETMQEL 248

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 74.0 bits (180), Expect = 2e-16
 Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 10/183 (5%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
             I DL GTLL+     +      L  YG   D    ++ +  +                
Sbjct: 5   DYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF------AIETFAP 58

Query: 71  AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
               F+ +     +  L       G + L++ +S  G    L S+ +   +E        
Sbjct: 59  NLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIA 118

Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
              +  V   S   R     P+  L   ++  +     LVI D  I + AG+AAG++   
Sbjct: 119 AYFTEVVTSSSGFKRKPN--PESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHL 174

Query: 191 VPS 193
             S
Sbjct: 175 FTS 177

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 7e-16
 Identities = 35/75 (46%), Positives = 54/75 (72%)

Query: 236 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 295
           P++  G VV+G GRGSK LGIPTAN   +   ++ ++  +G+Y+GWA + +  V+KMV+S
Sbjct: 4   PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63

Query: 296 IGWNPYFDNAEKTIV 310
           IGWNPY+ N +K++ 
Sbjct: 64  IGWNPYYKNTKKSME 78

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 72.6 bits (176), Expect = 1e-15
 Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 11/213 (5%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKT------PLEEAAII 62
           +  DL GTL +   +     + F  +       W  ++      ++        ++A   
Sbjct: 5   IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 64

Query: 63  VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
              +       +      S   D   ++         ++ L   G+ +A+ SN    +I+
Sbjct: 65  ALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID 124

Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
             +    G  + F  ++  D V+  KP   ++  A + L ++ S+ L +  +       +
Sbjct: 125 -AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 183

Query: 183 AAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 214
             G     +              D  + SL  +
Sbjct: 184 YFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.1 bits (175), Expect = 2e-15
 Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 19/223 (8%)

Query: 10  SCVILDLDGTLLNT----DGMFS---EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-- 60
           S  +LD++GT+       + +F      +   + +  ++               E+    
Sbjct: 4   STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63

Query: 61  ---IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
              ++ +D   P  K          +     K      A   IK      +  + +  + 
Sbjct: 64  ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123

Query: 118 RATIE------SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
           +          +        N         +     K     +    + +  + S  L +
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFL 182

Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
            D+ + + A    G+                   +V  +   L
Sbjct: 183 SDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 69.8 bits (169), Expect = 8e-15
 Identities = 30/207 (14%), Positives = 73/207 (35%), Gaps = 9/207 (4%)

Query: 10  SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP 69
           +  I DLDGTLL++       ++    ++   +D  +  + + K  +++  + V +    
Sbjct: 2   TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL 61

Query: 70  CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
             +           ++   +V  +PGA  ++      G+   + ++              
Sbjct: 62  DVEV-LNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGV 120

Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
               +  +   S  VR  KPSP+       +  +   ++  I D  + V   + +G++ +
Sbjct: 121 ESYFTEILTSQSGFVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 178

Query: 190 AVPSLPKQTHRYTAADEVINSLLDLRP 216
                          +  I +L D+  
Sbjct: 179 NF------LESTYEGNHRIQALADISR 199

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 69.5 bits (168), Expect = 1e-14
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 5/204 (2%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
            ++ D+DGTL N+   ++ V++  L  YGK +   +  K            + E      
Sbjct: 5   ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAAS 61

Query: 71  AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
               F  +   + + H  +++  PG   L + L            S R          + 
Sbjct: 62  EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYP 119

Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
           +    +V + +D+    KP P   L A +++N+ P ++L I DSV      +AA ++   
Sbjct: 120 FMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179

Query: 191 VPSLPKQTHRYTAADEVINSLLDL 214
                     +          LD+
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 69.8 bits (169), Expect = 2e-14
 Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 15/225 (6%)

Query: 12  VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG---- 67
           V+ D  GTL +   +     + +    G+      + K +  + L        D+     
Sbjct: 5   VVFDAYGTLFDVQSVADATERAYP-GRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63

Query: 68  --LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
             L         E    F   +     +  P  +          +  A+ SN     ++ 
Sbjct: 64  EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ- 122

Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
            +    G  +SF  ++  D  R  KP PD +    + L + P+  L +  +   V   K 
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKN 182

Query: 184 AGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
            G  V  V      +L ++    T A   +   L +R E +   P
Sbjct: 183 FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 70.6 bits (172), Expect = 2e-14
 Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)

Query: 43  DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 102
             +     + +   +E  +  + Y     K        + +      ++ +     L+  
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226

Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 149
           L   G  + +A+               G    F    I  + +V              KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285

Query: 150 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
           +P  ++ A    N +                   ++ DS+  +++ +  G   +   +  
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345

Query: 196 KQTH-----RYTAADEVINSLLDLR 215
           K            AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 67.6 bits (163), Expect = 7e-14
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 12/215 (5%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
            +  DLDGTL+N+    +  + + L                     +  +    D+    
Sbjct: 6   LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 65

Query: 71  AKHEFVNEVYSMFS---------DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
           A+ E   + +  F          +     +  P     ++ L   G  +A+ +N     +
Sbjct: 66  AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 125

Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
           +  +    G +  FS ++G   +   KP P  F     +  + P   L + DS   + A 
Sbjct: 126 QPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAA 184

Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
            +AG  VV +            +  D + +   D+
Sbjct: 185 HSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 67.1 bits (162), Expect = 1e-13
 Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 15/221 (6%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           + L   V+ D+DGTLL  + M   VL   L++          H   GK        ++ +
Sbjct: 2   RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 58

Query: 66  YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
            GL  A+  +  ++    +            +  L G   L+  LS     +      + 
Sbjct: 59  VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 118

Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNMEPSSSLVIEDSV 175
                      G +  F     +D+       P I LE        N  PS  ++I D+ 
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTE 178

Query: 176 IGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
             +   +      +AV +     +         +  +  + 
Sbjct: 179 HDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 26/217 (11%), Positives = 54/217 (24%), Gaps = 53/217 (24%)

Query: 5   LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
           + +L    + DLD TL                     W                    V+
Sbjct: 1   MTRLPKLAVFDLDYTL---------------------WPF-----------------WVD 22

Query: 65  DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
            +  P         V      +   ++  P    ++  L   GVP+A AS +      ++
Sbjct: 23  THVDPPFHKSSDGTVRDRRGQN---IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQ 79

Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
           +       + F                  F     +  +  S  +  +D    ++     
Sbjct: 80  LLELFDLGKYFIQREIYP-----GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRL 134

Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221
           G+  + +          +    +   L      + GL
Sbjct: 135 GVTCIHIR------DGMS-LQTLTQGLETFAKAQAGL 164

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 65.4 bits (158), Expect = 4e-13
 Identities = 36/237 (15%), Positives = 67/237 (28%), Gaps = 29/237 (12%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           K     +I D DGT+   D     ++KTF      EW   +   +     ++E    +  
Sbjct: 4   KPF---IICDFDGTITMND-NIINIMKTFA---PPEWMALKDGVLSKTLSIKEGVGRMFG 56

Query: 66  YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
                 K E  + V           K   G    +  ++ H +P  + S          +
Sbjct: 57  LLPSSLKEEITSFVLE-------DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPL 108

Query: 126 SYQHGWNESF---SVIVGSDEVRT----------GKPSPDIFLEAAKRLNMEPSSSLVIE 172
                  +          +D +                          L+      ++I 
Sbjct: 109 LEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIG 168

Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 229
           DSV  V A K + +   A   L  +               ++R E   +   Q+W++
Sbjct: 169 DSVTDVEAAKLSDL-CFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 56.8 bits (135), Expect = 3e-10
 Identities = 25/208 (12%), Positives = 67/208 (32%), Gaps = 8/208 (3%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
           ++ +  DLDGTL+++             + G      +  +     PLE +         
Sbjct: 4   ITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQ 63

Query: 69  PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
                +     Y     +  ++       ++I  L        L   + + T  ++   +
Sbjct: 64  ISEAVQIYRSYYKAKGIYEAQLF-----PQIIDLLEELSSSYPLYITTTKDTSTAQDMAK 118

Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
           +     F                D+  +A +   + P  +++I D+   ++  +  G++ 
Sbjct: 119 NLEIHHF-FDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177

Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDL 214
           +A+      +        D + +  L++
Sbjct: 178 LAITWGFGEQADLLNYQPDYIAHKPLEV 205

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.8 bits (135), Expect = 5e-10
 Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------- 61
            V  DLD TL++T G     +   +     ++  +E+ +I+      + +          
Sbjct: 8   AVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTC 67

Query: 62  -----------IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVP 109
                       +++        +   E Y ++     + +        ++  L    V 
Sbjct: 68  ITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VR 126

Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
           + L +N  R T   KI         F  IV   E +  KP+P IF      L ++P   +
Sbjct: 127 LLLLTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185

Query: 170 VIEDSVI-GVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
           ++ D++   +  G  AG++       S             +++S+L+L
Sbjct: 186 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 55.2 bits (131), Expect = 1e-09
 Identities = 26/222 (11%), Positives = 64/222 (28%), Gaps = 17/222 (7%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---------------EWDGREKHKIVGK 53
           +  V  D  GTLL+ +G     LK      G                  +    +     
Sbjct: 2   IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61

Query: 54  TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMAL 112
            P+ +    V          ++    + +      +  +  P    ++K L      + +
Sbjct: 62  RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGK-YHVGM 120

Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
            ++S    + + +      +   S+    +            L   K       +  V +
Sbjct: 121 ITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGD 180

Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           + V      K  GM  + +    ++   +   D +++ L ++
Sbjct: 181 NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Length = 130

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

 Score = 50.8 bits (121), Expect = 1e-08
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 237 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSI 296
           + I G V K    G K LG PTAN+       V  +   GVY     L        VM++
Sbjct: 2   FEIEGIVHKDREFGRK-LGFPTANIDRGNEKLV--DLKRGVYLVRVHLPDGKKKFGVMNV 58

Query: 297 GWNPYFDNAEKT 308
           G+ P   +A   
Sbjct: 59  GFRPTVGDARNV 70

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 44.4 bits (103), Expect = 5e-06
 Identities = 38/216 (17%), Positives = 67/216 (31%), Gaps = 31/216 (14%)

Query: 6   KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
           KKL   ++ D D TL+N     +E +     + G E + ++  K   +  L     + + 
Sbjct: 4   KKL---ILFDFDSTLVN-----NETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKR 55

Query: 66  YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
             L         E                GA   IK L   G  +A+ S      +    
Sbjct: 56  VSLLKDLPIEKVEKAIKRITPTE------GAEETIKELKNRGYVVAVVSGGFDIAVNKIK 109

Query: 126 SYQHGWNESFSVIVGSDEVRT---------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176
                     + ++  D   T              +I  + AK   +    ++ + D   
Sbjct: 110 EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAN 169

Query: 177 GVVAGKAAGMEVV--AVPSLPKQTHRYTAADEVINS 210
            +   K AG+++   A P L +       AD  I  
Sbjct: 170 DISMFKKAGLKIAFCAKPILKE------KADICIEK 199

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)

Query: 80  YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 122
                D   K+   PG    +  L   G  + + +N                        
Sbjct: 19  SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78

Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
                           + +DE    KP   +         M+ ++S VI D    +   +
Sbjct: 79  FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138

Query: 183 AAGMEVVAV 191
             G+  +  
Sbjct: 139 NMGINGLRY 147

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 37/225 (16%), Positives = 63/225 (28%), Gaps = 25/225 (11%)

Query: 4   PLKKLMS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
            L+KL      V  D+D T++       E +       G E    E  +      +   A
Sbjct: 2   ELRKLFYSADAVCFDVDSTVIR-----EEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA 56

Query: 61  IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
            + E   L     E V  + +    HL      PG   L+  L    V + L S   R+ 
Sbjct: 57  ALTERLALIQPSREQVQRLIAEQPPHLT-----PGIRELVSRLQERNVQVFLISGGFRSI 111

Query: 121 I----------ESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLNMEPSSSL 169
           +           + +              G DE   T +      +    +        +
Sbjct: 112 VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKII 171

Query: 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
           +I D    + A   A    +       +      A   I   ++L
Sbjct: 172 MIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 215

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 26/248 (10%), Positives = 59/248 (23%), Gaps = 44/248 (17%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
             ++DLDGT+           +                         + +          
Sbjct: 4   GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 63

Query: 48  HKIVGKTPLEEAAIIVEDYG----------------LPCAKHEFVNEVYSMFSDHLCKVK 91
              +  T        +++                  +  A  E+           L    
Sbjct: 64  PASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTEL 123

Query: 92  ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
           +          +    + +    + +  T    +               +  V  GKP  
Sbjct: 124 SYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKA 183

Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS---LPKQTHRYTA-ADE 206
            I   A   L +E    +++ D+    + +G   G++ + V S                 
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243

Query: 207 VINSLLDL 214
           V++SL + 
Sbjct: 244 VVDSLDEW 251

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)

Query: 61  IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
            I  D   P    E V         +  +     V  +   + + +         A+   
Sbjct: 33  TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92

Query: 116 SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
                    +   +     ++E+    +   +    KP+P + +EA KRL ++   SL++
Sbjct: 93  VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152

Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
            D +  + AGK AG+    +                I  L D 
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 45/248 (18%)

Query: 9   MSCVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGR 45
           +  VI D+DG L++ +       +                         L          
Sbjct: 3   IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62

Query: 46  EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALP-----GANRLI 100
               +   + +  A  +    G           ++ ++          P     G  R  
Sbjct: 63  VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122

Query: 101 KHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIF 154
                H     +A+ +           +               I G      GKPSP I 
Sbjct: 123 NWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182

Query: 155 LEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS-------LPKQTHRYTAADE 206
             A  ++      ++++ D++   ++AG  AG+E + V S       +     R      
Sbjct: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR---PSW 239

Query: 207 VINSLLDL 214
           +  S+ ++
Sbjct: 240 IYPSVAEI 247

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 44/248 (17%)

Query: 11  CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
             ++DLDGT+                                     + +        + 
Sbjct: 4   GYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKT 63

Query: 48  HKIVGKTPLEEAA---------IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKAL 93
                 T                     G    K       Y   S++     +     L
Sbjct: 64  PLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDTNL 123

Query: 94  PGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDEVRTGKPSP 151
                 +  L+     + + +N        +                     +  GKP  
Sbjct: 124 TYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEA 183

Query: 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAA----DE 206
            I  +A  RL ++   ++++ D+    + AG    +  + V +   +     A     D 
Sbjct: 184 VIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDF 243

Query: 207 VINSLLDL 214
           V++SL + 
Sbjct: 244 VLSSLAEW 251

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	313
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.97
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.97
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.96
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.96
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.95
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.95
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.95
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.95
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.95
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.94
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.93
d1n08a_	154	Riboflavin kinase {Fission yeast (Schizosaccharomy	99.93
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.93
d1nb9a_	147	Riboflavin kinase {Human (Homo sapiens) [TaxId: 96	99.92
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.92
d1mrza1	130	Riboflavin kinase domain of bifunctional FAD synth	99.92
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.91
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.9
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.86
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.86
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.86
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.84
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.84
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.77
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.76
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.74
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.73
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.72
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.7
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.69
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.66
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.62
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.59
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.56
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.46
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.43
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.28
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.19
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.17
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.08
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.06
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	98.97
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.93
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.92
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.89
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.85
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.79
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.68
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.62
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.61
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.57
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	98.49
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	98.44
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.14
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	97.99
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	97.99
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.7
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.58
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.02
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.45
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	95.37
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	95.34
d1mrza2	157	FMN adenylyltransferase domain of bifunctional FAD	92.52
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	91.09
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	89.82

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.5e-30  Score=210.95  Aligned_cols=208  Identities=23%  Similarity=0.378  Sum_probs=171.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChh-hhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS   84 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   84 (313)
                      +++|+++||+||||+|+.+.+..++.++++++|.+++.. ......+................. .....+.....+.+.
T Consensus         1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (218)
T d1te2a_           1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI   80 (218)
T ss_dssp             CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred             CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999887654 445566666666666555555443 334445454444444


Q ss_pred             hhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        85 ~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ... ...+++||+.++|+.|++.|++++++||++...+...+ +++|+.++|+.++++++++.+||+|+.|+.+++++|+
T Consensus        81 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~  159 (218)
T d1te2a_          81 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV  159 (218)
T ss_dssp             HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred             HhhhccccccchHHHHHHHhhhcccccccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence            433 35678999999999999999999999999999998888 8899999999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc-cccccceeeccccccC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLR  215 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-~~~~s~~ii~~l~e~~  215 (313)
                      +|++|++|||+.+|+.+|+++|+.+++++....... ....++.+++++.|+.
T Consensus       160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~  212 (218)
T d1te2a_         160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT  212 (218)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred             CchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence            999999999999999999999999999977433222 2457899999998874

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.97  E-value=1.5e-30  Score=212.29  Aligned_cols=202  Identities=20%  Similarity=0.354  Sum_probs=172.0

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   85 (313)
                      |++|+|+||+||||+|+.+.+.+++.++++++|.+.......+..+......    +...+.. ...+.+...+.+.+..
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   76 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQA----MTELGIAASEFDHFQAQYEDVMAS   76 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHH----HHHTTCCGGGHHHHHHHHHHHHTT
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhh----hhccccchhhHHHHHHHhhhhhcc
Confidence            4589999999999999999999999999999999998888877777765443    3344443 3345566666666666


Q ss_pred             hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCC
Q 021360           86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        86 ~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      .....+++||+.++|+.|++ +++++++||+....+...+ +++++..+|+.++++++...+||+|+.++.+++++|++|
T Consensus        77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~  154 (207)
T d2hdoa1          77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP  154 (207)
T ss_dssp             CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred             cccccccccchhhhhhhhcc-ccccccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeec
Confidence            66788999999999999975 6899999999999999888 889999999999999999999999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ++|++|||+.+|+.+|+++|+.++++..+.........++.++.++.++
T Consensus       155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dl  203 (207)
T d2hdoa1         155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDI  203 (207)
T ss_dssp             GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGG
T ss_pred             cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHH
Confidence            9999999999999999999999999987655554445678888887765

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.96  E-value=4.5e-28  Score=196.92  Aligned_cols=195  Identities=17%  Similarity=0.251  Sum_probs=158.8

Q ss_pred             cEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhh-hcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 021360           10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC   88 (313)
Q Consensus        10 k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (313)
                      ++++||+||||+|+.+.+..++.++++++|.+.+.+.... ..+......+..+....+..  .+.+.......+.....
T Consensus         2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   79 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNA   79 (204)
T ss_dssp             CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTCGG
T ss_pred             EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh--HHHHHHHHHHHHHhhcc
Confidence            6899999999999999999999999999999887665543 44566667777777766554  33333333444444456


Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      ...++||+.++|+.|++.|++++++||++.. ....+ +++|+..+|+.++++++....||+|+.|+.++++++++|++|
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~  157 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT  157 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             cCcccchHHhhhhcccccccchhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceE
Confidence            7889999999999999999999999998765 44567 889999999999999999999999999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ++|||+.+|+.+|+++|++++++.++..      .++..++++.+.
T Consensus       158 l~VgD~~~Di~~A~~~G~~~i~v~~~~~------~~~~~~~~~~dl  197 (204)
T d2go7a1         158 YYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADI  197 (204)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEESSCCSC------TTEEECSSTTHH
T ss_pred             EEEeCCHHHHHHHHHcCCeEEEEcCCCC------CcCeecCCHHHH
Confidence            9999999999999999999999977432      244555555543

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.96  E-value=1.3e-27  Score=196.65  Aligned_cols=209  Identities=17%  Similarity=0.220  Sum_probs=164.9

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCC-hhhhhhhcCCCHHHHHHHHHH----HhCCCCCHHHHHH---
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVE----DYGLPCAKHEFVN---   77 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~---   77 (313)
                      |+++|+|+||+||||+|+.+.+..++.++++++|.+.. .+......+............    .............   
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR   80 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHH
Confidence            35789999999999999999999999999999997644 445566666655544333322    2222222222211   


Q ss_pred             HHHHHHH-hhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHH
Q 021360           78 EVYSMFS-DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE  156 (313)
Q Consensus        78 ~~~~~~~-~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~  156 (313)
                      ....... .......++|++.++|+.|++.|++++++||++...++..+ +.+|+..+|+.++++++.+..||+|+.+..
T Consensus        81 ~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~  159 (224)
T d2hsza1          81 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY  159 (224)
T ss_dssp             HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred             HHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHH
Confidence            1111111 22346789999999999999999999999999999999888 889999999999999999999999999999


Q ss_pred             HHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc--cccccceeeccccccC
Q 021360          157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLR  215 (313)
Q Consensus       157 ~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~s~~ii~~l~e~~  215 (313)
                      +++++++++++|++|||+.+|+.+|+++|+.++++..+.....  ....+++++.++.++.
T Consensus       160 ~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~  220 (224)
T d2hsza1         160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADIL  220 (224)
T ss_dssp             HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGG
T ss_pred             HHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHH
Confidence            9999999999999999999999999999999999987544322  2345889999998874

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.95  E-value=9e-28  Score=202.11  Aligned_cols=207  Identities=18%  Similarity=0.234  Sum_probs=161.9

Q ss_pred             CccEEEEecCCccccChHH-HHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHH----------HHhCCCCCHH---
Q 021360            8 LMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKH---   73 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~---   73 (313)
                      ++|+|+||+||||+|+... ...++.++++++|..++.+++....|....+....+.          ..++......   
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ   80 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence            4799999999999998653 3678889999999999888887777765554433322          2233222222   


Q ss_pred             HHHHHHHHHHHhhh-ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc-ceEEecCCCCCCCCCh
Q 021360           74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP  151 (313)
Q Consensus        74 ~~~~~~~~~~~~~~-~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f-~~v~~~~~~~~~kp~~  151 (313)
                      .....+.+.+.... ....++||+.++|+.|++.|++++++||.+...++..+ +++++..+| +.+++++++..+||+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p  159 (257)
T d1swva_          81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYP  159 (257)
T ss_dssp             HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred             HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHH-HHHhhcccccccccccccccccccCh
Confidence            23334444444443 35689999999999999999999999999999999888 888999887 8899999999999999


Q ss_pred             HHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc-------------------------cccccc
Q 021360          152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-------------------------RYTAAD  205 (313)
Q Consensus       152 ~~~~~~~~~~~~~-~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~-------------------------~~~~s~  205 (313)
                      +.|..+++++|+. +++|+||||+.+|+.+|+++|+.++.|.++.....                         ....++
T Consensus       160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad  239 (257)
T d1swva_         160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH  239 (257)
T ss_dssp             HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999995 58999999999999999999999999988643210                         012378


Q ss_pred             eeeccccccC
Q 021360          206 EVINSLLDLR  215 (313)
Q Consensus       206 ~ii~~l~e~~  215 (313)
                      ++++++.|+.
T Consensus       240 ~vi~~l~eL~  249 (257)
T d1swva_         240 FTIETMQELE  249 (257)
T ss_dssp             EEESSGGGHH
T ss_pred             EEECCHHHHH
Confidence            9999998764

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.95  E-value=4.1e-27  Score=193.50  Aligned_cols=183  Identities=25%  Similarity=0.358  Sum_probs=152.8

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHH---HHHHHHH
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NEVYSMF   83 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   83 (313)
                      |+|+|+||+||||+|+...+.+++.++++++|.+.....+ ....+.........+....+...+.+.+.   ....+.+
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY   80 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence            6899999999999999999999999999999987665444 44566777777777777766666555443   3333344


Q ss_pred             Hhhh---ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHH
Q 021360           84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR  160 (313)
Q Consensus        84 ~~~~---~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~  160 (313)
                      ....   ....++||+.++|+.|++.|++++++|++..  ....+ +..++..+|+.++++++.+.+||+|+.|+.++++
T Consensus        81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~  157 (221)
T d1o08a_          81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA  157 (221)
T ss_dssp             HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHH
T ss_pred             cccccccccccccCCceeccccccccccceEEEeecch--hhHHH-HhhccccccccccccccccccccChHHHHHHHHH
Confidence            4333   2467899999999999999999999998754  45566 8889999999999999999999999999999999


Q ss_pred             cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       161 ~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +|++|++|++|||+.+|+.+|+++|+++++|.+
T Consensus       158 ~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~  190 (221)
T d1o08a_         158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             cCCCCceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence            999999999999999999999999999999987

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.95  E-value=3e-27  Score=189.46  Aligned_cols=177  Identities=23%  Similarity=0.263  Sum_probs=148.5

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH   86 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (313)
                      |++|+|+||+||||+|+...+..++.++++++|.+.+........+......+.    .+...  .+.+.+.+.+.+...
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~   74 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIE----TFAPN--LENFLEKYKENEARE   74 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHH----HHCTT--CTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhh----hhhHH--HHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999988877776666555444333    33222  234455566666666


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      .....++||+.++|+.|++.|++++++||++....+ .+ +++++..+|+.+++++++...||+|+.++.+++++++  +
T Consensus        75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~  150 (187)
T d2fi1a1          75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-IL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--S  150 (187)
T ss_dssp             TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--S
T ss_pred             hhcCcccchhHHHHHHHHhhhccccccccCccchhh-hh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--C
Confidence            678899999999999999999999999998876654 66 7899999999999999999999999999999999875  5


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +|++|||+..|+.+|+++|+.+++++.
T Consensus       151 ~~l~vgDs~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         151 SGLVIGDRPIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             CeEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            699999999999999999999999876

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.95  E-value=1.3e-26  Score=190.65  Aligned_cols=202  Identities=23%  Similarity=0.369  Sum_probs=164.9

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-   86 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   86 (313)
                      +|+|+||+||||+|+...+..++.++++++|.+++.++. ..+.|.........+....+....... .+.....+... 
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   80 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASL-LDKSEKLLDMRL   80 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHH-HHHHHHHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccc-hhHHHHHHHHHh
Confidence            689999999999999999999999999999999887766 556778888888999999988765443 34444444333 


Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEe-cCC--CCCCCCChHHHHHHHHHcCC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-SDE--VRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~-~~~--~~~~kp~~~~~~~~~~~~~~  163 (313)
                      .....++||+.++|+.++.   +.+++|++....+...+ +++++..+|+.+++ +++  ....||+|+.|..+++++|+
T Consensus        81 ~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~  156 (222)
T d2fdra1          81 ERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV  156 (222)
T ss_dssp             HHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred             hhccchhhhHHHHhhhccc---cceeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhCC
Confidence            3568899999999988764   56799999999998888 88999999986544 433  35789999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc------ccccceeeccccccC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR------YTAADEVINSLLDLR  215 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~------~~~s~~ii~~l~e~~  215 (313)
                      +|++|++|||+..|+.+|+++|+.++++..+......      ...++.+++++.|+.
T Consensus       157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~  214 (222)
T d2fdra1         157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLP  214 (222)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHH
T ss_pred             CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHH
Confidence            9999999999999999999999999999885432211      124899999998863

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.95  E-value=1.3e-26  Score=188.89  Aligned_cols=200  Identities=16%  Similarity=0.250  Sum_probs=158.9

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCC-ChhhhhhhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD   85 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (313)
                      .++|+|+||+||||+|+...+..++.++++++|.+. +.+.++...+......+...+..    ...+.........+..
T Consensus         2 ~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~   77 (210)
T d2ah5a1           2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK----DQISEAVQIYRSYYKA   77 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCG----GGHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccc----hhhHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999764 45566667676665544333211    1233333444444433


Q ss_pred             h-hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCC
Q 021360           86 H-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME  164 (313)
Q Consensus        86 ~-~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~  164 (313)
                      . .....++|++.++|+.++.. ++++++|+++...++..+ +++|+..+|+.++++.+.  ++|+|+.+..+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~~  153 (210)
T d2ah5a1          78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLA  153 (210)
T ss_dssp             TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTCC
T ss_pred             hhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhcc
Confidence            3 34678899999999999877 589999999999999888 889999999999988875  677889999999999999


Q ss_pred             CCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeecccccc
Q 021360          165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDL  214 (313)
Q Consensus       165 ~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~  214 (313)
                      |+++++|||+.+|+.+|+++|+++++|..+......  ...++.+++++.|+
T Consensus       154 ~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el  205 (210)
T d2ah5a1         154 PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV  205 (210)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred             cccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence            999999999999999999999999999875433322  23588999998875

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.94  E-value=2.6e-26  Score=189.59  Aligned_cols=205  Identities=21%  Similarity=0.302  Sum_probs=154.0

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHc-CCCCChhhhhhhcCCCHHHHHHHHHHHhCCCCCH-----HHHHHHHHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKY-GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK-----HEFVNEVYSM   82 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~   82 (313)
                      .|+|+||+||||+|+...+..++.+++.+. +........ .+.+.........++...+.....     +...+.+...
T Consensus         2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSH-DFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL   80 (228)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHH-HHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence            478999999999999999888888877764 444332222 233445555566666666654221     1111222222


Q ss_pred             HHhhh--ccCCCCchHHHHHHHHHHCC-CCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           83 FSDHL--CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        83 ~~~~~--~~~~~~pgv~e~l~~l~~~g-~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      +....  ....++||+.++|+.|++.| ++++++||++...+...+ +.+|+..+|+.++++++....||+|..+...+.
T Consensus        81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~  159 (228)
T d2hcfa1          81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERAR  159 (228)
T ss_dssp             HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHH
T ss_pred             HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHHhh
Confidence            33222  34678999999999999987 889999999999998888 899999999999999999889999888766665


Q ss_pred             Hc---CCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc--ccccceeeccccccC
Q 021360          160 RL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLR  215 (313)
Q Consensus       160 ~~---~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~--~~~s~~ii~~l~e~~  215 (313)
                      .+   +++|++|++|||+.+|+.+|+++|++++.|.++....+.  ...++.+++++.++.
T Consensus       160 ~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~  220 (228)
T d2hcfa1         160 RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETD  220 (228)
T ss_dssp             HHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHH
T ss_pred             hhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHH
Confidence            55   799999999999999999999999999999875544332  336899999998864

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.7e-25  Score=186.88  Aligned_cols=208  Identities=19%  Similarity=0.294  Sum_probs=150.9

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhh----h-----hh-------cCCCH----HHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK----H-----KI-------VGKTP----LEEAAIIVED   65 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~----~-----~~-------~g~~~----~~~~~~~~~~   65 (313)
                      ++++|+|+||+||||+|+......++.++++.++........    .     ..       .....    ...+...+..
T Consensus         3 m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (247)
T d2gfha1           3 LSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE   82 (247)
T ss_dssp             CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHH
Confidence            468999999999999999888777777777655432221110    0     00       00111    1122333334


Q ss_pred             hCCCCCHHHHHHHHHHHHHh-hhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCC
Q 021360           66 YGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV  144 (313)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~  144 (313)
                      .....+...+.......+.. ......++|++.++|+.|++ +++++++||++...+...+ ++.|+..+|+.+++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~  160 (247)
T d2gfha1          83 TKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQ  160 (247)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGS
T ss_pred             hccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhh-hhcccccccccccccccc
Confidence            44444444444444333332 33567899999999999985 7999999999999888888 889999999999999999


Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEE-EeCCCCCc-cccccccceeeccccccC
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVV-AVPSLPKQ-THRYTAADEVINSLLDLR  215 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i-~v~~~~~~-~~~~~~s~~ii~~l~e~~  215 (313)
                      +.+||+|++|+.+++++|++|++|++|||+. +|+.+|+++|++++ ++.+.... ......++.++.++.++.
T Consensus       161 ~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~  234 (247)
T d2gfha1         161 KEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELP  234 (247)
T ss_dssp             SSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHH
T ss_pred             ccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHH
Confidence            9999999999999999999999999999997 79999999999844 55443222 222446899999998864

>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=2.2e-27  Score=178.92  Aligned_cols=78  Identities=44%  Similarity=0.824  Sum_probs=67.3

Q ss_pred             CCCC--ccccccceeeeecCC-CcccCccccccCCCccccc--cCCCCCeEEEEEEEecCCceeEEEEEecCCccccCCc
Q 021360          232 LPSE--PWYIGGPVVKGLGRG-SKVLGIPTANLSTEGYSDV--LSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAE  306 (313)
Q Consensus       232 ~lg~--p~~~~g~v~~g~~~g-~~~lg~ptan~~~~~~~~~--~p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~  306 (313)
                      .+++  ||.++|+|+||+++| |+ ||||||||.++....+  .|  +.||||+|+.+ ++.+|+||+|||+||||++.+
T Consensus         9 ~~~~PyPy~i~G~Vv~G~~~G~R~-LGfPTANl~~~~~~~l~~~P--~~GVYa~~v~i-~~~~y~~v~niG~rPTf~~~~   84 (154)
T d1n08a_           9 KVQSPYPIRFEGKVVHGFGRGSKE-LGIPTANISEDAIQELLRYR--DSGVYFGYAMV-QKRVFPMVMSVGWNPYYKNKL   84 (154)
T ss_dssp             SCCTTCCEEEEEEEECCSSSCGGG-GTCCCEEECGGGTTTTTTTS--CSEEEEEEEEE-TTEEEEEEEEEEECTTCSSCC
T ss_pred             CCCCCCCEEEEEEEEeCCccCCcc-cCcCCeeecCcccccccccc--ccceEEEEEee-eceeEEEEEeeccchhccccc
Confidence            4444  578999999999999 67 9999999998764233  37  78999999999 778999999999999998888


Q ss_pred             ceEeecC
Q 021360          307 KTIVSLT  313 (313)
Q Consensus       307 ~~~e~~~  313 (313)
                      ++||+||
T Consensus        85 ~~~Evhi   91 (154)
T d1n08a_          85 RSAEVHL   91 (154)
T ss_dssp             EEEEEEE
T ss_pred             ceEEEEE
Confidence            8999996

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.93  E-value=1.6e-25  Score=185.11  Aligned_cols=201  Identities=19%  Similarity=0.279  Sum_probs=148.9

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHcCC-CCChhhhh------------hhcC---CCHH----HHHHHHHHHhC
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKH------------KIVG---KTPL----EEAAIIVEDYG   67 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~-~~~~~~~~------------~~~g---~~~~----~~~~~~~~~~~   67 (313)
                      |+|+|+||+||||+|+..........+.+.++. ........            ...+   ....    +.+..+....+
T Consensus         1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (230)
T d1x42a1           1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG   80 (230)
T ss_dssp             CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred             CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence            689999999999999877766666555555542 22322111            1111   1111    23344444555


Q ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCC
Q 021360           68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG  147 (313)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~  147 (313)
                      ...... ..+......   .....++||+.++|+.|++ +++++++||++...+...+ +..|+.++|+.++++++.+..
T Consensus        81 ~~~~~~-~~~~~~~~~---~~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~  154 (230)
T d1x42a1          81 FKYPEN-FWEIHLRMH---QRYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFF  154 (230)
T ss_dssp             CCCCTT-HHHHHHHHH---HHHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBC
T ss_pred             hchHHH-HHHHHHHHH---HhhCcccccHHHHHHHhhc-cCceeeeeccccccchhhh-ccccccccccccccccccccc
Confidence            442221 111111111   1346789999999999975 6999999999999998888 889999999999999999999


Q ss_pred             CCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       148 kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ||+|++|+.+++++|++|++|++|||+. +|+.+|+++|++++++++..........+++++.++.++
T Consensus       155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el  222 (230)
T d1x42a1         155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV  222 (230)
T ss_dssp             TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred             chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHH
Confidence            9999999999999999999999999986 799999999999999987554444455789999999876

>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=173.10  Aligned_cols=76  Identities=46%  Similarity=0.977  Sum_probs=67.0

Q ss_pred             ccccccceeeeecCC-CcccCccccccCCCccccccC-CCCCeEEEEEEEecCCceeEEEEEecCCccccCCcceEeecC
Q 021360          236 PWYIGGPVVKGLGRG-SKVLGIPTANLSTEGYSDVLS-EHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIVSLT  313 (313)
Q Consensus       236 p~~~~g~v~~g~~~g-~~~lg~ptan~~~~~~~~~~p-~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~e~~~  313 (313)
                      ||.++|+|+||.++| |+ ||||||||.++.. +.+| ....|||++++.+.++.+|+||+|||.||||++...++|+|+
T Consensus         4 Py~i~G~Vv~G~~~G~r~-LGfPTANl~~~~~-~~lp~~~~~GVY~~~v~i~~~~~y~gi~niG~rPTf~~~~~~~E~h~   81 (147)
T d1nb9a_           4 PYFCRGQVVRGFGRGSKQ-LGIPTANFPEQVV-DNLPADISTGIYYGWASVGSGDVHKMVVSIGWNPYYKNTKKSMETHI   81 (147)
T ss_dssp             SEEEEEECBCCSSSCGGG-GTCCCEECCHHHH-HTSCTTSCSEEEEEEEEETTCCCEEEEEEEEECTTSSSCCEEEEEEE
T ss_pred             CEEEEEEEEeCCccCCCc-cCcCCcCCcCchh-hccccccccCceEEEEEecCCCccceEEEeccccccccccceEEEEE
Confidence            999999999999999 67 9999999998775 5655 124799999999877788999999999999988788999995

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.92  E-value=4.9e-24  Score=174.58  Aligned_cols=127  Identities=16%  Similarity=0.264  Sum_probs=113.4

Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS  166 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~  166 (313)
                      .....++|++.++++.+++.+++++++||+.....+..+ ++.++..+|+.++++++.+..||+|+.|+.+++++|++|+
T Consensus        89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~  167 (220)
T d1zrna_          89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRS  167 (220)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred             hccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence            345778999999999999999999999999999888777 8899999999999999999999999999999999999999


Q ss_pred             cEEEEecCHhhHHHHHHcCCeEEEeCCCCC-ccccccccceeecccccc
Q 021360          167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDL  214 (313)
Q Consensus       167 ~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~-~~~~~~~s~~ii~~l~e~  214 (313)
                      +|+||||+..|+.+|+++|++++++.+... .......+++++++|.++
T Consensus       168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el  216 (220)
T d1zrna_         168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV  216 (220)
T ss_dssp             GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHH
T ss_pred             eEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHH
Confidence            999999999999999999999999986332 223344689999998875

>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Reductase/isomerase/elongation factor common domain
superfamily: Riboflavin kinase-like
family: ATP-dependent riboflavin kinase-like
domain: Riboflavin kinase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=2.6e-26  Score=169.17  Aligned_cols=73  Identities=27%  Similarity=0.346  Sum_probs=49.7

Q ss_pred             cccccceeeeecCCCcccCccccccCCCcccccc-CCCCCeEEEEEEEecCCceeEEEEEecCCccccC-CcceEeecC
Q 021360          237 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVL-SEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFDN-AEKTIVSLT  313 (313)
Q Consensus       237 ~~~~g~v~~g~~~g~~~lg~ptan~~~~~~~~~~-p~~~~gvy~~~~~~~~~~~~~~~~~~g~~p~~~~-~~~~~e~~~  313 (313)
                      |.++|+|+||+++||+ ||||||||.+++. .++ |  +.||||+|+++.++..|+||+|||+||||++ ...++|+||
T Consensus         2 y~i~G~V~~G~~~Gr~-lGfPTANl~~~~~-~~~~p--~~GVY~~~v~~~~~~~~~~v~~iG~~PTf~~~~~~~~E~hi   76 (130)
T d1mrza1           2 FEIEGIVHKDREFGRK-LGFPTANIDRGNE-KLVDL--KRGVYLVRVHLPDGKKKFGVMNVGFRPTVGDARNVKYEVYI   76 (130)
T ss_dssp             CEEEEEC------------CCCEECBCCSS-CBCCC--CSEEEEEEEECGGGCEEEEEEEEEEC------CCEEEEEEE
T ss_pred             EEEEEEEEeCCccccc-cCCCCCCcccccc-ccccc--ccceeEEEEEEeeccccceEEEEEeecccccccceeEEEEE
Confidence            7889999999999999 9999999999875 444 6  6899999999867788999999999999964 567899996

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-23  Score=174.23  Aligned_cols=127  Identities=13%  Similarity=0.105  Sum_probs=107.1

Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEec-CCCCCCCCChHHHHHHHHHcCCCC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEP  165 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~-~~~~~~kp~~~~~~~~~~~~~~~~  165 (313)
                      .....++||+.++|++|+++|++++++||++.......+ +..++.++|+..... ++....||+|..|..+++++|++|
T Consensus       123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p  201 (253)
T d1zs9a1         123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST  201 (253)
T ss_dssp             SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred             hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence            345788999999999999999999999999999888777 888988888755443 556679999999999999999999


Q ss_pred             CcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccc--cccccceeecccccc
Q 021360          166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL  214 (313)
Q Consensus       166 ~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~--~~~~s~~ii~~l~e~  214 (313)
                      ++|+||||+.+|+.+|+++|+++++|.+......  ....++.++++|.|+
T Consensus       202 ~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL  252 (253)
T d1zs9a1         202 NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL  252 (253)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred             CcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence            9999999999999999999999999976322222  234567889998875

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.90  E-value=1e-23  Score=175.48  Aligned_cols=109  Identities=22%  Similarity=0.377  Sum_probs=99.2

Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      +...+....++|++.+.|+.|+  ++.+.++|+++...+...+ ++.++..+|+.++++++++..||+|++|..+++++|
T Consensus        85 l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg  161 (245)
T d1qq5a_          85 MAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG  161 (245)
T ss_dssp             HHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHC
T ss_pred             HHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHhC
Confidence            3444566789999999999886  5788999999999888777 889999999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++|++|++|||+.+|+.+|+++|+++++|++.
T Consensus       162 ~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~  193 (245)
T d1qq5a_         162 VTPAEVLFVSSNGFDVGGAKNFGFSVARVARL  193 (245)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCEEEEECCS
T ss_pred             CChhhEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence            99999999999999999999999999999763

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=6.8e-21  Score=155.83  Aligned_cols=202  Identities=12%  Similarity=0.067  Sum_probs=124.3

Q ss_pred             CccEEEEecCCccccChHH-------HHHHHHHHHHHcCCCCChhhh-hhhcCCCHHHHHHHHHHHhCCCCCHHHHH---
Q 021360            8 LMSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFV---   76 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~-------~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---   76 (313)
                      ++++|+||+||||+|+...       ..+.+.+.+.+.+........ ..............+..............   
T Consensus         2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (225)
T d2g80a1           2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ   81 (225)
T ss_dssp             CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred             CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence            6899999999999997531       223333334333333222222 22223333333333332222221111111   


Q ss_pred             HHH-HHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHH----------HhhcCCccccceEEecCCCC
Q 021360           77 NEV-YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI----------SYQHGWNESFSVIVGSDEVR  145 (313)
Q Consensus        77 ~~~-~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l----------~~~~~~~~~f~~v~~~~~~~  145 (313)
                      ... ...+........+++++.+++..    +..+.+.++..........          .+..++.++|+.+++++.. 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~-  156 (225)
T d2g80a1          82 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS-  156 (225)
T ss_dssp             HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH-
T ss_pred             HHHHHHHHHhhcccccchhhHHHHHhh----HHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc-
Confidence            111 11122222345567777776643    3567778877665443322          1456888999999888654 


Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      ..||+|+.|..+++++|++|++|+||||+..|+.+|+++|++++++.+..........+..++.++.|+
T Consensus       157 ~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL  225 (225)
T d2g80a1         157 GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL  225 (225)
T ss_dssp             CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred             CCCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence            479999999999999999999999999999999999999999999986433333333456677777653

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=2e-22  Score=165.02  Aligned_cols=107  Identities=15%  Similarity=0.180  Sum_probs=94.8

Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCc----hHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN  162 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~----~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~  162 (313)
                      .....++|++.++|+.|++.|++++++|++.    .......+ ...++..+|+.++++++++.+||+|+.|..++++++
T Consensus        93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~  171 (222)
T d1cr6a1          93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK  171 (222)
T ss_dssp             HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred             HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence            3456789999999999999999999999753    23334344 677899999999999999999999999999999999


Q ss_pred             CCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       163 ~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++|++|+||||+..|+.+|+++|+++++|..+
T Consensus       172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~  203 (222)
T d1cr6a1         172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNT  203 (222)
T ss_dssp             SCTTSEEEEESSSTTTHHHHHHTCEEEECCSS
T ss_pred             CCcceEEEEECCHHHHHHHHHcCCEEEEECCc
Confidence            99999999999999999999999999999763

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-21  Score=160.25  Aligned_cols=107  Identities=18%  Similarity=0.202  Sum_probs=93.4

Q ss_pred             hccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHH---HHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~---~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      .....++|++.++|..|++.|++++++||.......   .......++..+|+.++++++++.+||+|+.|+.+++++|+
T Consensus        95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~  174 (225)
T d1zd3a1          95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA  174 (225)
T ss_dssp             HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence            345678999999999999999999999987543221   12224567888999999999999999999999999999999


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +|++|++|||+..|+.+|+++|++++++.+
T Consensus       175 ~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~  204 (225)
T d1zd3a1         175 SPSEVVFLDDIGANLKPARDLGMVTILVQD  204 (225)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred             CccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence            999999999999999999999999999976

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.8e-21  Score=150.09  Aligned_cols=103  Identities=13%  Similarity=0.129  Sum_probs=90.2

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcE
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS  168 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  168 (313)
                      .+.++||+.++|+.|++.|++++++|+++.......+.+.+++..+|..+..+     .||+|+.+..+++++|++|++|
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~  118 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-----PGSKVTHFERLHHKTGVPFSQM  118 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-----SSCHHHHHHHHHHHHCCCGGGE
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-----cCCChHHHHHHHHHhCCChHHE
Confidence            46899999999999999999999999887655433433888998888877653     6799999999999999999999


Q ss_pred             EEEecCHhhHHHHHHcCCeEEEeCCCCC
Q 021360          169 LVIEDSVIGVVAGKAAGMEVVAVPSLPK  196 (313)
Q Consensus       169 i~vgD~~~Di~~a~~~G~~~i~v~~~~~  196 (313)
                      ++|||+..|+.+|+++|+.++.|..+..
T Consensus       119 l~igD~~~di~aA~~aG~~~i~v~~G~~  146 (164)
T d1u7pa_         119 VFFDDENRNIIDVGRLGVTCIHIRDGMS  146 (164)
T ss_dssp             EEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence            9999999999999999999999988643

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=3.5e-21  Score=153.75  Aligned_cols=174  Identities=16%  Similarity=0.167  Sum_probs=125.0

Q ss_pred             EEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhh------------cCCCHHHHHHHHHHHhCCCCCHHHHHHH
Q 021360           11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------VGKTPLEEAAIIVEDYGLPCAKHEFVNE   78 (313)
Q Consensus        11 ~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (313)
                      +++||+||||+|+...  ..+..+.+..+...  ......            ............................
T Consensus         2 l~iFDlDgtL~d~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (197)
T d2b0ca1           2 LYIFDLGNVIVDIDFN--RVLGAWSDLTRIPL--ASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHG   77 (197)
T ss_dssp             EEEECCBTTTEEEETH--HHHHHHHHHHCCCH--HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred             EEEEeCCCCcCcCHHH--HHHHHHHHHhCCCH--HHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHHH
Confidence            4789999999987432  22223333333331  111111            1123344445555555554333222111


Q ss_pred             HHHHHHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHH
Q 021360           79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA  158 (313)
Q Consensus        79 ~~~~~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~  158 (313)
                      .    .  .....+++++.+++..++..|+.++++|+++.......+....++..+|+.++++++.+..||+|+.++.++
T Consensus        78 ~----~--~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~  151 (197)
T d2b0ca1          78 W----Q--AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVL  151 (197)
T ss_dssp             H----H--TCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHH
T ss_pred             H----H--HhccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHH
Confidence            1    1  123568899999999999999999999998877666556343478899999999999999999999999999


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      +++|++|++|++|||+.+|+.+|+++|++++++.+.
T Consensus       152 ~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         152 QAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             HhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence            999999999999999999999999999999999874

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=2.5e-19  Score=138.51  Aligned_cols=107  Identities=16%  Similarity=0.167  Sum_probs=80.2

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCcc---ccceEEecCCCCCCCC
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNE---SFSVIVGSDEVRTGKP  149 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~---~f~~v~~~~~~~~~kp  149 (313)
                      ..+.++||+.++|+.|++.|++++++||.+.               ..+...+ ...++..   +|...+..+++..+||
T Consensus        27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~i~~~~~~~~~~~~~~KP  105 (161)
T d2fpwa1          27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQFDEVLICPHLPADECDCRKP  105 (161)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHH-HHTTCCEEEEEEECCCGGGCCSSSTT
T ss_pred             HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhc-cccccccceeeecccccccccccccc
Confidence            3467899999999999999999999999751               1222333 3444421   1222233456668899


Q ss_pred             ChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      +|.++..++++++++|++|+||||+..|+.+|+++|++++++.+..
T Consensus       106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~  151 (161)
T d2fpwa1         106 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET  151 (161)
T ss_dssp             SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred             ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence            9999999999999999999999999999999999999999998743

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.76  E-value=2e-19  Score=147.51  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=101.8

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce---EEecC----------CCCCCCCChHHH
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV---IVGSD----------EVRTGKPSPDIF  154 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~---v~~~~----------~~~~~kp~~~~~  154 (313)
                      ...+++|++.++++.|++.|++++++|++....++..+ +++++.++|..   .+..+          .....++++..+
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  150 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCK  150 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCH
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHH
Confidence            34679999999999999999999999999999999888 88888766532   11111          112456777888


Q ss_pred             HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccC
Q 021360          155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEG  230 (313)
Q Consensus       155 ~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~  230 (313)
                      ..+++++++++++|++|||+.+|+.||+.||+.+ .+............+...++++.+.......+.+..+|+.|
T Consensus       151 ~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~-a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~~~  225 (226)
T d2feaa1         151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCF-ARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN  225 (226)
T ss_dssp             HHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEE-ECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHTC
T ss_pred             HHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEE-EecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999744 22221111111223445566777665555555666666654

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2.2e-17  Score=130.67  Aligned_cols=126  Identities=21%  Similarity=0.247  Sum_probs=92.8

Q ss_pred             ccCCCCchHHHHHHHHHHCCCCEEEEeCCchH---------------HHHHHHHhhcCCccccceEEec-----------
Q 021360           88 CKVKALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGS-----------  141 (313)
Q Consensus        88 ~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~---------------~~~~~l~~~~~~~~~f~~v~~~-----------  141 (313)
                      ..+.++||+.++|+.|++.|+.++++||.+.-               ++...+ ...++. .....+|.           
T Consensus        24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~cp~~p~~~~~~~~  101 (182)
T d2gmwa1          24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD-LDGIYYCPHHPQGSVEEFR  101 (182)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC-CSEEEEECCBTTCSSGGGB
T ss_pred             HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhh-hhhccc-ccceeeccccccccccccc
Confidence            34578999999999999999999999998631               111122 222221 11233332           


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe-EEEeCCCCCcccc-ccccceeeccccccC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHR-YTAADEVINSLLDLR  215 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~-~i~v~~~~~~~~~-~~~s~~ii~~l~e~~  215 (313)
                      .++..+||+|.++..+++++++++++++||||+..|+.+|+++|+. ++.+..+...... ...+++++.++.++.
T Consensus       102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~  177 (182)
T d2gmwa1         102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLP  177 (182)
T ss_dssp             SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHH
T ss_pred             ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHH
Confidence            2345789999999999999999999999999999999999999996 4667665433222 345899999998763

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.4e-18  Score=136.94  Aligned_cols=192  Identities=14%  Similarity=0.097  Sum_probs=114.4

Q ss_pred             ccCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhh-h-hcCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 021360            6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-K-IVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus         6 ~~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      ....++|+||+||||++++.     +..+....|..-....+. . ..|. ...+.+...+..+..  ...+    ..+.
T Consensus         7 ~~~~~aV~FD~DGTLi~~e~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~----~~~~   75 (217)
T d1nnla_           7 FYSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SREQ----VQRL   75 (217)
T ss_dssp             HHHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHHH----HHHH
T ss_pred             hCCCCEEEEcCccccCCccH-----HHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhccc--chHH----HHHH
Confidence            34578999999999999863     345555666542221111 1 1111 222222222222211  1111    1111


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCcccc------c----eEEecCCCC----CCC
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------S----VIVGSDEVR----TGK  148 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f------~----~v~~~~~~~----~~k  148 (313)
                      ..+  ....++||+.++++.|+++|++++++|++....++..+ +.+|+..+.      +    ..+.+....    ...
T Consensus        76 ~~~--~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~-~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~  152 (217)
T d1nnla_          76 IAE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG  152 (217)
T ss_dssp             HHH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTT
T ss_pred             HHh--hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHH-HHhCCcccceeeeeeeeeehhccccceeeeeeeccc
Confidence            111  34678999999999999999999999999999999888 889986421      0    111111111    122


Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecccccc
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL  214 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~  214 (313)
                      .+...++.+.+  ++++++|+++||+.+|+.|++.+|+.+.+ ............+++++.++.|+
T Consensus       153 ~K~~~v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~va~-~~~~~~~~~~~~ad~~i~~f~el  215 (217)
T d1nnla_         153 GKGKVIKLLKE--KFHFKKIIMIGDGATDMEACPPADAFIGF-GGNVIRQQVKDNAKWYITDFVEL  215 (217)
T ss_dssp             HHHHHHHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEEEEE-CSSCCCHHHHHHCSEEESCGGGG
T ss_pred             hHHHHHHHHHh--ccCccccEEEEeCHhhHHHHHhCCceEEE-CCCHHHHHHHHhCCCEeCCHHHh
Confidence            23455555544  45788999999999999999999987544 33222222334688888888775

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.72  E-value=7e-18  Score=135.94  Aligned_cols=104  Identities=21%  Similarity=0.348  Sum_probs=80.3

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCch---------------HHHHHHHHhhcCCccccceEEec------------
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS------------  141 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~---------------~~~~~~l~~~~~~~~~f~~v~~~------------  141 (313)
                      .+.++||+.++|+.|++.|++++++||.+.               ..+...+ ...|+.  ++.++..            
T Consensus        46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~~--~~~~~~~~~~~~~~~~~~~  122 (209)
T d2o2xa1          46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAI  122 (209)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCC
T ss_pred             HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhcccc--cceEEEecccccccccccc
Confidence            457899999999999999999999999641               1122222 233321  2333322            


Q ss_pred             CCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCC
Q 021360          142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP  195 (313)
Q Consensus       142 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~  195 (313)
                      .++..+||+|.++..+++++++++++|+||||+.+|+.+|+++|++++++..+.
T Consensus       123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred             cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence            133457999999999999999999999999999999999999999998887654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=9.3e-18  Score=139.72  Aligned_cols=79  Identities=23%  Similarity=0.335  Sum_probs=64.4

Q ss_pred             eEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccc
Q 021360          137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSL  211 (313)
Q Consensus       137 ~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l  211 (313)
                      .....+....+||+|..+..+++++|++|++|+||||++ +|+.+|+++|+++++|.++......    ...|+++++++
T Consensus       165 ~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl  244 (250)
T d2c4na1         165 KISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSV  244 (250)
T ss_dssp             HHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSG
T ss_pred             HhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCH
Confidence            333444455789999999999999999999999999997 5999999999999999886443332    23579999999


Q ss_pred             cccC
Q 021360          212 LDLR  215 (313)
Q Consensus       212 ~e~~  215 (313)
                      .|+.
T Consensus       245 ~eL~  248 (250)
T d2c4na1         245 AEID  248 (250)
T ss_dssp             GGCC
T ss_pred             HHhC
Confidence            8864

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.69  E-value=3.2e-17  Score=132.00  Aligned_cols=186  Identities=17%  Similarity=0.147  Sum_probs=121.3

Q ss_pred             cCccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhh---hhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 021360            7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH---KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF   83 (313)
Q Consensus         7 ~~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (313)
                      ++.|+|+||+||||+|++.     +..+++..|.........   .................. ...        .....
T Consensus         2 ~kkKlv~FDlDGTL~d~es-----~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~   67 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDL--------PIEKV   67 (210)
T ss_dssp             CCCCEEEECCCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTC--------BHHHH
T ss_pred             CCCeEEEEeCCCCcCCchH-----HHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHH-hhh--------HHHHH
Confidence            4579999999999999863     445555555431111110   011111111111111111 100        01111


Q ss_pred             HhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecC----------CCCCCCCChHH
Q 021360           84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRTGKPSPDI  153 (313)
Q Consensus        84 ~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~----------~~~~~kp~~~~  153 (313)
                      ........+++++.++++.+...|..++++|++....+.... .+.+....+...+..+          ....+++++..
T Consensus        68 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (210)
T d1j97a_          68 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI  146 (210)
T ss_dssp             HHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred             HHHhhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccch
Confidence            222345788999999999999999999999999888887766 6667665554433322          22356667888


Q ss_pred             HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       154 ~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      +...+.+++++++++++|||+.||+.|++.+|+.+++ +.   .+.....++.++++.
T Consensus       147 ~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na---~~~lk~~Ad~vi~~~  200 (210)
T d1j97a_         147 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CA---KPILKEKADICIEKR  200 (210)
T ss_dssp             HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SC---CHHHHTTCSEEECSS
T ss_pred             hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CC---CHHHHHhCCEEEcCC
Confidence            9999999999999999999999999999999998765 43   233445688888754

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.66  E-value=3.4e-17  Score=136.46  Aligned_cols=72  Identities=21%  Similarity=0.324  Sum_probs=60.4

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccccC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR  215 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~-Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e~~  215 (313)
                      ...+||+|.+|..+++++|++|++|+||||+.. |+.+|+++|+++++|.++....+.    ...|+.+++++.|.+
T Consensus       176 ~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~  252 (253)
T d1wvia_         176 IIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD  252 (253)
T ss_dssp             EECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred             EEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence            335799999999999999999999999999975 999999999999999876433222    234799999998864

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.62  E-value=8e-16  Score=128.01  Aligned_cols=77  Identities=22%  Similarity=0.273  Sum_probs=63.1

Q ss_pred             EecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCccc----cccccceeeccccc
Q 021360          139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVINSLLD  213 (313)
Q Consensus       139 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~----~~~~s~~ii~~l~e  213 (313)
                      ........+||+|.++..+++++|++|++|+||||+. +|+.+|+++|+.+++|.++....+    ....|+++++++.|
T Consensus       171 ~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e  250 (253)
T d1yv9a1         171 TQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDE  250 (253)
T ss_dssp             HTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGG
T ss_pred             ccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHH
Confidence            3444455799999999999999999999999999997 599999999999999977543222    23357999999987


Q ss_pred             cC
Q 021360          214 LR  215 (313)
Q Consensus       214 ~~  215 (313)
                      ..
T Consensus       251 ~~  252 (253)
T d1yv9a1         251 WT  252 (253)
T ss_dssp             CC
T ss_pred             cC
Confidence            63

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.59  E-value=1.5e-15  Score=126.82  Aligned_cols=72  Identities=22%  Similarity=0.299  Sum_probs=60.7

Q ss_pred             CCCCCCChHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEeCCCCCcccc----ccccceeeccccccC
Q 021360          144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLR  215 (313)
Q Consensus       144 ~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~~~G~~~i~v~~~~~~~~~----~~~s~~ii~~l~e~~  215 (313)
                      ...+||+|..+..+++++|++|++|+||||+. +|+.+|+++|+.+++|.++......    ...|+++++++.|+.
T Consensus       181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~  257 (261)
T d1vjra_         181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELA  257 (261)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHH
T ss_pred             cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHH
Confidence            34689999999999999999999999999997 6999999999999999886443321    235799999998763

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.56  E-value=3e-14  Score=108.46  Aligned_cols=104  Identities=14%  Similarity=0.017  Sum_probs=72.8

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhc-----CC-ccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH-----GW-NESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~-----~~-~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ...++|++.++|+.|++.|+.++++|+.+...   ....+ +..     .+ ...++...... ....+|+.......+.
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~k~~~l~  111 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGVPLVMQCQRE-QGDTRKDDVVKEEIFW  111 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCCCCSEEEECC-TTCCSCHHHHHHHHHH
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHH-HHHhhhhhhcCCCcEEEeeccc-ccccCCchHHHHHHHH
Confidence            45789999999999999999999999986422   11222 110     01 11223333333 3345566677777777


Q ss_pred             HcCCCCCc-EEEEecCHhhHHHHHHcCCeEEEeCCC
Q 021360          160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL  194 (313)
Q Consensus       160 ~~~~~~~~-~i~vgD~~~Di~~a~~~G~~~i~v~~~  194 (313)
                      ++..+..+ +++|||+..|+++|+++|++++.|.++
T Consensus       112 ~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1         112 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred             HhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence            77666656 567899999999999999999999875

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.46  E-value=8.6e-14  Score=122.15  Aligned_cols=127  Identities=19%  Similarity=0.247  Sum_probs=104.5

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce--EEecCC-----------CCCCCCChHHHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSDE-----------VRTGKPSPDIFLEA  157 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~--v~~~~~-----------~~~~kp~~~~~~~~  157 (313)
                      +++|++.++|+.|++.|++++++|+.+...+...+ +++|+.++|+.  ++++++           ....||+|+.+..+
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~  293 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA  293 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence            35679999999999999999999999999999888 88999999863  555443           35789999999888


Q ss_pred             HHH--------------cCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCcccc-----ccccceeeccccccCccc
Q 021360          158 AKR--------------LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-----YTAADEVINSLLDLRPEK  218 (313)
Q Consensus       158 ~~~--------------~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~-----~~~s~~ii~~l~e~~~~~  218 (313)
                      +..              ++.++++|+|+||+.+|+.+|+++|++++.|.++......     ...++.+++++.++....
T Consensus       294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il  373 (380)
T d1qyia_         294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL  373 (380)
T ss_dssp             HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred             HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence            754              3567889999999999999999999999999886543321     236899999998875433

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.43  E-value=1.9e-13  Score=109.16  Aligned_cols=161  Identities=17%  Similarity=0.152  Sum_probs=101.8

Q ss_pred             ccEEEEecCCccccChHHHHHHHHHHHHHcCCCCChhhhhhhcCCC---HHHHHH---HHHHHhCCCCCHHHHHHHHHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT---PLEEAA---IIVEDYGLPCAKHEFVNEVYSM   82 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~   82 (313)
                      ||+|+|||||||+++      .|.++.++.|+...     ...|++   ..+...   .++...+..          ...
T Consensus         2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~-----~~tgR~~~~~~~~~~~~v~ll~~~~~~----------~~~   60 (206)
T d1rkua_           2 MEIACLDLEGVLVPE------IWIAFAEKTGIDAL-----KATTRDIPDYDVLMKQRLRILDEHGLK----------LGD   60 (206)
T ss_dssp             CEEEEEESBTTTBCC------HHHHHHHHHTCGGG-----GCCTTTCCCHHHHHHHHHHHHHHTTCC----------HHH
T ss_pred             cEEEEEcCccchHHH------HHHHHHHHcCCHHH-----HHHCCCCCCHHHHHHHHHHHHHhCCCc----------eeh
Confidence            689999999999984      35666777786431     112221   112111   111211111          111


Q ss_pred             HHhhhccCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCC----CCCCCCChHHHHHHH
Q 021360           83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAA  158 (313)
Q Consensus        83 ~~~~~~~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~----~~~~kp~~~~~~~~~  158 (313)
                      +..........++....+..++ .++..+++|.+......... ..++....+........    .....+++......+
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  138 (206)
T d1rkua_          61 IQEVIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV  138 (206)
T ss_dssp             HHHHHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred             hhhhhhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHH
Confidence            2222356778888888887765 56888999988877776666 66666443322221111    112334445667788


Q ss_pred             HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       159 ~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +.++++++++++|||+.||++|.+.+|+.+.+ +.
T Consensus       139 ~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na  172 (206)
T d1rkua_         139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA  172 (206)
T ss_dssp             HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC
T ss_pred             HHhcccccceEEecCCccCHHHHHhCCccEEE-CC
Confidence            89999999999999999999999999998877 44

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.28  E-value=6.9e-12  Score=101.65  Aligned_cols=64  Identities=17%  Similarity=0.085  Sum_probs=51.1

Q ss_pred             CCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       145 ~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      ..+.+++..++.++++++++++++++|||+.||+.|++.+|+.+.+-+.   .+.....++.+.++.
T Consensus       148 ~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na---~~~~k~~A~~v~~~~  211 (230)
T d1wr8a_         148 KPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA---PKILKENADYVTKKE  211 (230)
T ss_dssp             CTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHTTCSEECSSC
T ss_pred             eCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCC---CHHHHHhCCEEECCC
Confidence            3667888999999999999999999999999999999999986544322   344455677777654

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.19  E-value=2.1e-11  Score=98.89  Aligned_cols=63  Identities=14%  Similarity=0.026  Sum_probs=47.4

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL  211 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l  211 (313)
                      .+..+...++.+++++|++++++++|||+.||+.|++.+|..+.+-+.   .+.....++.+.+.-
T Consensus       148 ~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na---~~~~k~~ad~v~~~~  210 (225)
T d1l6ra_         148 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA---TDNIKAVSDFVSDYS  210 (225)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTS---CHHHHHHCSEECSCC
T ss_pred             CccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCC---cHHHHHhCCEEECCC
Confidence            344567889999999999999999999999999999999986644222   333344566665543

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=7.6e-11  Score=92.35  Aligned_cols=95  Identities=16%  Similarity=0.294  Sum_probs=75.6

Q ss_pred             CCchHHHHHHHHHHCCCCEEEEeCCch--------HH----HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           92 ALPGANRLIKHLSCHGVPMALASNSHR--------AT----IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        92 ~~pgv~e~l~~l~~~g~~~~i~s~~~~--------~~----~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      ++|++.+.|+.|.+.|+.++++||.+.        +.    ....+ +.++..  +...++..+...+||.+.++..+++
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~-~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~  127 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE  127 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH-HHcCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence            479999999999999999999999742        22    22223 555543  3566677777799999999999999


Q ss_pred             HcC----CCCCcEEEEecC-----------------HhhHHHHHHcCCeEE
Q 021360          160 RLN----MEPSSSLVIEDS-----------------VIGVVAGKAAGMEVV  189 (313)
Q Consensus       160 ~~~----~~~~~~i~vgD~-----------------~~Di~~a~~~G~~~i  189 (313)
                      +++    ++.++++||||.                 ..|+..|.++|++..
T Consensus       128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1         128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            875    888999999994                 489999999999864

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.08  E-value=4e-10  Score=94.23  Aligned_cols=62  Identities=21%  Similarity=0.143  Sum_probs=49.5

Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+...++.+++.+|++++++++|||+.||+.|.+.+|..+++-+.   .++....++.+.++..+
T Consensus       213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na---~~~~k~~A~~v~~~~~~  274 (285)
T d1nrwa_         213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNA---REDIKSIADAVTLTNDE  274 (285)
T ss_dssp             SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTC---CHHHHHHCSEECCCGGG
T ss_pred             hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCC---CHHHHHhCCEEcCCCCc
Confidence            567889999999999999999999999999999999987644433   34444567777776543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=3.9e-10  Score=93.60  Aligned_cols=62  Identities=19%  Similarity=0.120  Sum_probs=48.2

Q ss_pred             CChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       149 p~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+...++.+++.++++++++++|||+.||+.|.+.+|..+++-+   ..++....++.+.++..+
T Consensus       197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~n---a~~~lk~~a~~i~~~~~~  258 (271)
T d1rkqa_         197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDN---AIPSVKEVANFVTKSNLE  258 (271)
T ss_dssp             SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHHCSEECCCTTT
T ss_pred             CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCC---CCHHHHHhCCEEcCCCCc
Confidence            45678999999999999999999999999999999998664433   234444467777765543

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=98.97  E-value=2.6e-09  Score=88.42  Aligned_cols=65  Identities=17%  Similarity=0.086  Sum_probs=51.8

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-.+...++.++++++++++++++|||+.||+.|.+.+|..+++-   ...++....+++++.+..+
T Consensus       187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~---na~~~~k~~A~~i~~~~~~  251 (267)
T d1nf2a_         187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME---NAIEKVKEASDIVTLTNND  251 (267)
T ss_dssp             TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT---TSCHHHHHHCSEECCCTTT
T ss_pred             CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC---CCCHHHHHhCCEEcCCCCc
Confidence            4445678899999999999999999999999999999999865443   2234455578888887655

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.93  E-value=1.1e-09  Score=90.77  Aligned_cols=64  Identities=16%  Similarity=0.052  Sum_probs=51.1

Q ss_pred             CCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      +-.+...++.+++++|++++++++|||+.||++|.+.+|..+++-+.   .+.....++.+..+..+
T Consensus       188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na---~~~lk~~A~~v~~~~~~  251 (269)
T d1rlma_         188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA---AENIKQIARYATDDNNH  251 (269)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTC---CHHHHHHCSEECCCGGG
T ss_pred             chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCC---CHHHHHhCCEEcCCCCc
Confidence            34467899999999999999999999999999999999997765443   34445567888776644

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.92  E-value=1.6e-09  Score=83.72  Aligned_cols=98  Identities=16%  Similarity=0.186  Sum_probs=74.9

Q ss_pred             HHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 021360          100 IKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV  179 (313)
Q Consensus       100 l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~  179 (313)
                      +..|+..|+.++++|......+.... ..+++    ..++.+     .+++...++.+++++++++++|+++||..||++
T Consensus        41 i~~l~~~gi~~~iis~~~~~~v~~~~-~~l~~----~~~~~~-----~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~  110 (177)
T d1k1ea_          41 IKMLMDADIQVAVLSGRDSPILRRRI-ADLGI----KLFFLG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP  110 (177)
T ss_dssp             HHHHHHTTCEEEEEESCCCHHHHHHH-HHHTC----CEEEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred             HHHHhhhcEEEEEecCCchhHHHHHH-hhhcc----cccccc-----cccHHHHHHHHHHHhcCCcceeEEecCCccHHH
Confidence            67788899999999998888777666 66666    444332     345567888999999999999999999999999


Q ss_pred             HHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       180 ~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      +.+.+|..+++.+.   .+.....++++..+
T Consensus       111 ~l~~~g~siap~nA---~~~vk~~A~~Vt~~  138 (177)
T d1k1ea_         111 AFAACGTSFAVADA---PIYVKNAVDHVLST  138 (177)
T ss_dssp             HHHHSSEEEECTTS---CHHHHTTSSEECSS
T ss_pred             HHhhCCeEEEcCCc---cHHHHHhCCEEeCC
Confidence            99999986554433   33444456666655

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.89  E-value=4.8e-09  Score=82.13  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHH---HHHHHHhhcCCc--cccceEEecCCCCCCCCChHHHHHHHHHcCC
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM  163 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~~~~--~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~  163 (313)
                      ...+.||+.++++.++++|++++++||.....   ....|.+.+|+.  ..-+.++.+..  ..|..   -+..++++++
T Consensus        84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~--~~K~~---rr~~Ik~y~I  158 (209)
T d2b82a1          84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK--PGQNT---KSQWLQDKNI  158 (209)
T ss_dssp             GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC--TTCCC---SHHHHHHTTE
T ss_pred             ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC--CCchH---HHHHHHHcCe
Confidence            35678999999999999999999999986432   333443446663  22234454432  22222   2333355555


Q ss_pred             CCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       164 ~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                          ++++||..+|+.+|.++|++.+-+.+
T Consensus       159 ----~l~~GD~l~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         159 ----RIFYGDSDNDITAARDVGARGIRILR  184 (209)
T ss_dssp             ----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             ----EEEecCCHHHHhHHHHcCCCceEeec
Confidence                68999999999999999999988865

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.85  E-value=6.8e-09  Score=83.47  Aligned_cols=42  Identities=10%  Similarity=-0.014  Sum_probs=33.1

Q ss_pred             CChHHHHHHH---HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          149 PSPDIFLEAA---KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       149 p~~~~~~~~~---~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      .+...++.++   +++|++++++++|||+.||++|.+.+|..+++
T Consensus       184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV  228 (232)
T d1xvia_         184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV  228 (232)
T ss_dssp             CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred             hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEE
Confidence            3444455544   46799999999999999999999999986543

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.79  E-value=9.9e-09  Score=83.21  Aligned_cols=47  Identities=6%  Similarity=-0.115  Sum_probs=39.6

Q ss_pred             CCCChHHHHHHHHHcC-CCCCcEEEEecCHhhHHHHHHcCCeEEEeCC
Q 021360          147 GKPSPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       147 ~kp~~~~~~~~~~~~~-~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~  193 (313)
                      +-.+...++.++++++ ++++++++|||+.||++|.+.+|..+++-+.
T Consensus       177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na  224 (243)
T d1wzca1         177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL  224 (243)
T ss_dssp             SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred             hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence            4445678888888884 8999999999999999999999988776554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=5.8e-08  Score=80.64  Aligned_cols=96  Identities=19%  Similarity=0.177  Sum_probs=66.1

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEec-----CC---------CCCCCCChHHH
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-----DE---------VRTGKPSPDIF  154 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~-----~~---------~~~~kp~~~~~  154 (313)
                      .+.+.||+.++++.|++.|++++++|++-..+++.++ +++++...--.+++-     ++         +.....+....
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl-~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~  211 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA  211 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-HHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence            5789999999999999999999999999999999888 777875321123321     11         00111112233


Q ss_pred             HHHHH--HcCCCCCcEEEEecCHhhHHHHHHcC
Q 021360          155 LEAAK--RLNMEPSSSLVIEDSVIGVVAGKAAG  185 (313)
Q Consensus       155 ~~~~~--~~~~~~~~~i~vgD~~~Di~~a~~~G  185 (313)
                      .....  +..-+.++++++||+.+|+.||..+.
T Consensus       212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~  244 (291)
T d2bdua1         212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA  244 (291)
T ss_dssp             HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred             hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence            22222  22346678999999999999998764

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.62  E-value=3.2e-08  Score=82.00  Aligned_cols=62  Identities=13%  Similarity=0.044  Sum_probs=48.6

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeecc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS  210 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~  210 (313)
                      .+..+...++.+++.++++++++++|||+.||+.|.+.+|..+++-+.   .+.....++.+..+
T Consensus       204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na---~~~~k~~a~~v~~~  265 (283)
T d2b30a1         204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA---TDSAKSHAKCVLPV  265 (283)
T ss_dssp             TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC---CHHHHHHSSEECSS
T ss_pred             CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCC---CHHHHHhCCEEECC
Confidence            455667899999999999999999999999999999999987654322   34444466777653

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.61  E-value=6.6e-10  Score=91.79  Aligned_cols=65  Identities=14%  Similarity=0.134  Sum_probs=50.3

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-.+...++.+++++|++++++++|||+.||+.|.+.+|..+++-+.   .+.....++++.++-.+
T Consensus       183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na---~~~lk~~A~~vt~~~~~  247 (260)
T d2rbka1         183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA---KEDVKAAADYVTAPIDE  247 (260)
T ss_dssp             TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHSSEECCCGGG
T ss_pred             CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCC---CHHHHHhCCEEeCCCCc
Confidence            445667889999999999999999999999999999999996544322   34444567777776543

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=4.1e-07  Score=71.25  Aligned_cols=108  Identities=16%  Similarity=0.158  Sum_probs=66.8

Q ss_pred             hccCCCCchHHHHHHHHHHCCC-CEEEEeCCchHH------HHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHH
Q 021360           87 LCKVKALPGANRLIKHLSCHGV-PMALASNSHRAT------IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK  159 (313)
Q Consensus        87 ~~~~~~~pgv~e~l~~l~~~g~-~~~i~s~~~~~~------~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~  159 (313)
                      +..++++||+.++++.|++.+. .+.++|..+...      -...+.++++-......+++++     |.          
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----K~----------  134 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----KT----------  134 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----ST----------
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----cc----------
Confidence            4678999999999999998654 566777654321      1223434444333334444432     21          


Q ss_pred             HcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       160 ~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .  +..  -++|+|++..+.++.++|+.+++.+............-.++.+-.|
T Consensus       135 ~--~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e  184 (195)
T d1q92a_         135 V--VSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWAD  184 (195)
T ss_dssp             T--SCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTS
T ss_pred             e--ecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHH
Confidence            1  111  2899999999999999999999998755433221122344455544

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.49  E-value=5.1e-07  Score=73.06  Aligned_cols=46  Identities=22%  Similarity=0.152  Sum_probs=39.9

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEe
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      .+..+...++.+++++|+++++++++||+.||+.|.+.+|..+++-
T Consensus       159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~  204 (244)
T d1s2oa1         159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR  204 (244)
T ss_dssp             TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT
T ss_pred             CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeC
Confidence            4455678899999999999999999999999999999999866443

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=98.44  E-value=6.3e-06  Score=71.62  Aligned_cols=106  Identities=16%  Similarity=0.134  Sum_probs=78.6

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhc--------CCccccceEEecCC-------------C----
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-------------V----  144 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~--------~~~~~f~~v~~~~~-------------~----  144 (313)
                      +...|.+..+|++|++.|.++.++|||+-.++...+.-.+        .+.++||.|++...             +    
T Consensus       184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~  263 (458)
T d2bdea1         184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN  263 (458)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred             hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence            3456889999999999999999999999999876663323        67789999988531             0    


Q ss_pred             C-------CCCCC---hHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEeCCCC
Q 021360          145 R-------TGKPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPSLP  195 (313)
Q Consensus       145 ~-------~~kp~---~~~~~~~~~~~~~~~~~~i~vgD~~-~Di~~a~-~~G~~~i~v~~~~  195 (313)
                      +       ..+|.   ......+.+.+|....+|++|||+. .||...+ ..||+++.|.+..
T Consensus       264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL  326 (458)
T d2bdea1         264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL  326 (458)
T ss_dssp             CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred             CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence            0       00110   1124555567788889999999999 6977765 6799999998843

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.14  E-value=1.9e-05  Score=57.30  Aligned_cols=88  Identities=13%  Similarity=0.165  Sum_probs=68.1

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV  170 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~  170 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+    +.++..       -.|+......+++.-. ..+.|
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia-~~lgI----~~v~~~-------~~p~~k~~~v~~~q~~-~~v~~   87 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNL----DLVIAE-------VLPHQKSEEVKKLQAK-EVVAF   87 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTC----SEEECS-------CCHHHHHHHHHHHTTT-SCEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHH-hhhhh----hhhccc-------cchhHHHHHHHHHHcC-CEEEE
Confidence            57889999999999999999999998888887666 88898    555432       2234444555555433 57899


Q ss_pred             EecCHhhHHHHHHcCCeEEEe
Q 021360          171 IEDSVIGVVAGKAAGMEVVAV  191 (313)
Q Consensus       171 vgD~~~Di~~a~~~G~~~i~v  191 (313)
                      +||+.||..+.+.+++.+.+-
T Consensus        88 vGDg~nD~~aL~~Advgia~~  108 (135)
T d2b8ea1          88 VGDGINDAPALAQADLGIAVG  108 (135)
T ss_dssp             EECSSSSHHHHHHSSEEEEEC
T ss_pred             EeCCCCcHHHHHhCCeeeecC
Confidence            999999999999999876543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.99  E-value=2.1e-05  Score=62.10  Aligned_cols=58  Identities=10%  Similarity=0.040  Sum_probs=37.4

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEeCCCCCccccccccceeeccccc
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD  213 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e  213 (313)
                      .+-.+...++.++.     .+++++|||+.||+.|.+.+|..+.+... ..    ...+++.+++..+
T Consensus       156 ~g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~g-~~----~~~A~~~~~~~~e  213 (229)
T d1u02a_         156 PGVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIE  213 (229)
T ss_dssp             TTCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHH
T ss_pred             CCCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEeC-CC----CccCeEEcCCHHH
Confidence            34445566666653     36899999999999999999765433322 11    1245666665554

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=9e-06  Score=64.75  Aligned_cols=45  Identities=7%  Similarity=-0.185  Sum_probs=34.1

Q ss_pred             CCCCChHHHHHHHHHcCCCCCcEEEEecCH----hhHHHHHHcCCeEEEeCC
Q 021360          146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV----IGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       146 ~~kp~~~~~~~~~~~~~~~~~~~i~vgD~~----~Di~~a~~~G~~~i~v~~  193 (313)
                      .+-.+...++.++   +.+.+++++|||+.    ||++|.+.+|...+.|..
T Consensus       182 ~~vsKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n  230 (244)
T d2fuea1         182 EGWDKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS  230 (244)
T ss_dssp             TTCSTTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred             hhccHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence            3444557777765   35899999999975    999999999976566544

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.70  E-value=6.4e-05  Score=53.34  Aligned_cols=28  Identities=7%  Similarity=0.116  Sum_probs=25.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCc
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSH  117 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~  117 (313)
                      ..|.+++.+.+..|++.|+.+++.|...
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4688999999999999999999999874

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.58  E-value=9.4e-05  Score=55.74  Aligned_cols=99  Identities=12%  Similarity=0.022  Sum_probs=69.5

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccce----EEecCCC----------------CCCCCC
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV----IVGSDEV----------------RTGKPS  150 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~----v~~~~~~----------------~~~kp~  150 (313)
                      ++.|++.+.++.|++.|+++.++|+.......... +.+|+...-..    ...+.+.                -...-.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHH-HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            67899999999999999999999999888887666 77887432211    1111110                012223


Q ss_pred             hHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA  190 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD~~~Di~~a~~~G~~~i~  190 (313)
                      |+.-..+.+.+.-....+.|+||+.||..+.+.+.+.+.+
T Consensus        99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~  138 (168)
T d1wpga2          99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM  138 (168)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence            4444444454444557799999999999999999987655

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.02  E-value=0.00073  Score=47.63  Aligned_cols=32  Identities=19%  Similarity=0.146  Sum_probs=27.8

Q ss_pred             CCCchHHHHHHHHHHCCCCEEEEeCCchHHHH
Q 021360           91 KALPGANRLIKHLSCHGVPMALASNSHRATIE  122 (313)
Q Consensus        91 ~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~  122 (313)
                      .+.|++.+.|+.|++.|+.+++.|..+.....
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~   52 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLD   52 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchH
Confidence            57889999999999999999999999765543

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00038  Score=54.87  Aligned_cols=40  Identities=8%  Similarity=-0.191  Sum_probs=30.0

Q ss_pred             hHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEeCC
Q 021360          151 PDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS  193 (313)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~i~vgD----~~~Di~~a~~~G~~~i~v~~  193 (313)
                      ...++.+   ++++++++++|||    +.||++|.+.+|..++.+..
T Consensus       187 g~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~  230 (243)
T d2amya1         187 RYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA  230 (243)
T ss_dssp             GGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred             HHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence            3455554   3679999999999    67999999999976677654

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0033  Score=47.58  Aligned_cols=92  Identities=11%  Similarity=0.098  Sum_probs=66.4

Q ss_pred             CCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCccccceEEecCCCCCCCCChHHHHHHHHHcCCCCCcEE
Q 021360           90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL  169 (313)
Q Consensus        90 ~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i  169 (313)
                      +..+||+.++|+.+.+. +.+++.|.+.+++++.++ +.+.-...+......+.+....+.   +.+-+..+|.+.++++
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il-~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vv  128 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVL  128 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEE
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHH-HHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeE
Confidence            56799999999999887 999999999999999888 666665556666655544322221   1223456788889999


Q ss_pred             EEecCHhhHHHHHHcCC
Q 021360          170 VIEDSVIGVVAGKAAGM  186 (313)
Q Consensus       170 ~vgD~~~Di~~a~~~G~  186 (313)
                      +|+|++.-...-..-|+
T Consensus       129 ivDd~~~~~~~~~~N~I  145 (181)
T d1ta0a_         129 ILDNSPASYVFHPDNAV  145 (181)
T ss_dssp             EECSCGGGGTTCGGGBC
T ss_pred             EEcCChhhhhcCccCee
Confidence            99999876554334444

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.34  E-value=0.26  Score=38.15  Aligned_cols=42  Identities=17%  Similarity=0.138  Sum_probs=36.5

Q ss_pred             cCCCCchHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHhhcCCc
Q 021360           89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN  132 (313)
Q Consensus        89 ~~~~~pgv~e~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~  132 (313)
                      .+.+.||+.++++.+.+. .+.+++|.+..+++++.. .+.|+.
T Consensus        79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~-~~~gfp  120 (308)
T d1y8aa1          79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTA-SMIGVR  120 (308)
T ss_dssp             HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHH-HHTTCC
T ss_pred             ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHH-hhcCCC
Confidence            578899999999999988 899999999999998776 777773

>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.52  E-value=0.018  Score=42.09  Aligned_cols=48  Identities=13%  Similarity=0.094  Sum_probs=34.4

Q ss_pred             hHHHHHHcCCeEEEeCCCCCccccccccceeeccccccCccccCCCCccccccCCCCCC
Q 021360          177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE  235 (313)
Q Consensus       177 Di~~a~~~G~~~i~v~~~~~~~~~~~~s~~ii~~l~e~~~~~~~~~~~~~~~a~~~lg~  235 (313)
                      |+...++.|..+..++... .+....+|+.++..+.+|+++.          |+.+|||
T Consensus       110 ~~~~Lk~~g~~v~~i~~~~-~~~~~ISST~IR~~l~~G~i~~----------A~~lLGR  157 (157)
T d1mrza2         110 NASFLRKKGVEVYEIEDVV-VQGKRVSSSLIRNLVQEGRVEE----------IPAYLGR  157 (157)
T ss_dssp             CHHHHHHTTCEEEEECCCE-ETTEECCHHHHHHHHHTTCTTT----------THHHHSS
T ss_pred             chhhhccceeEEEeeccEe-eCCcEEcHHHHHHHHHcCCHHH----------HHHhcCC
Confidence            3344455566677776633 3334568888888999999999          9999987

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.049  Score=41.96  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=23.6

Q ss_pred             CccEEEEecCCccccChHHHHHHHHHHHHHc
Q 021360            8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY   38 (313)
Q Consensus         8 ~~k~vifDlDGTL~d~~~~~~~~~~~~~~~~   38 (313)
                      ..|+++||+||||++..+.+.+...++++++
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l   32 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKL   32 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHHHHHH
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHHHHHH
Confidence            3589999999999988666656666666655

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=89.82  E-value=0.11  Score=43.62  Aligned_cols=22  Identities=27%  Similarity=0.599  Sum_probs=18.8

Q ss_pred             ccEEEEecCCccccChHHHHHH
Q 021360            9 MSCVILDLDGTLLNTDGMFSEV   30 (313)
Q Consensus         9 ~k~vifDlDGTL~d~~~~~~~~   30 (313)
                      ||.|+||+||+|++.+..+..+
T Consensus         1 ~~~i~fd~dGVll~~~~~~D~s   22 (380)
T d1qyia_           1 MKKILFDVDGVFLSEERCFDVS   22 (380)
T ss_dssp             CCEEEECSBTTTBCSHHHHHHH
T ss_pred             CceEEEeCCcEEEcceeecchH
Confidence            5789999999999998877654