Citrus Sinensis ID: 021410

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV
Secondary Structure (PSIPRED)
cEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccEEEEEccEEEccccccccccccEEEccccccccccccccccccccccccccccccccHHHHHcccccccHHHHHHHcccccccccccHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccHHEEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEccHHHcccEcHHHHHHHHHHHHHHHHcccccEEEEEccccEEEccEcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccEEEccccEEEEcccEEEEEccEEEcccHHHEccccccccHHHccccccccEEEEEEccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHccEEEEEEcccc
Coil and Loop (DISEMBL)
mailnrpsALNALNTNMGAKLNKLFKAwendpnigfvsmkgsgrafcaggdiVSLYHFMNQGKLEECKDFFRTLYSFIYLLGthlkphvailngvtmgggagvsipgtfrvacgktvfatpetligfhpdagasfylshlpghLGEFLALTGAKLNGAEMMACGLAThysvseklPLIEEELgklvtddpsVIEACLEKYsdlvypdknsvihridivdkcfglDTVEEIIDSLESeaslindpwcgsTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRlisgdfyevsnfqilnkhv
Flexible Loop (DISEMBL)
mailnrpsalnALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKvslrsiregrfqtfdeclvREYRMSLQGVSRlisgdfyevsnfqilnkhv
Low Complexity Region (SEG)
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV
Disordered region (IsUnstruct)
************LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL****
Disordered Region (DISOPRED)
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY************HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV
Disordered Region (DISEMBL)
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV
Disordered Region (DISPRO)
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q5XF59	401	3-hydroxyisobutyryl-CoA h	yes	no	0.990	0.770	0.702	1e-121
Q8RXN4	409	3-hydroxyisobutyryl-CoA h	no	no	0.990	0.755	0.618	1e-115
Q6NMB0	378	Probable 3-hydroxyisobuty	no	no	0.983	0.812	0.491	1e-83
Q9LKJ1	378	3-hydroxyisobutyryl-CoA h	no	no	0.955	0.788	0.486	2e-81
Q1PEY5	378	Probable 3-hydroxyisobuty	no	no	0.983	0.812	0.472	3e-78
Q9SHJ8	387	3-hydroxyisobutyryl-CoA h	no	no	0.958	0.772	0.421	2e-68
Q8QZS1	385	3-hydroxyisobutyryl-CoA h	yes	no	0.894	0.724	0.399	1e-55
Q6NVY1	386	3-hydroxyisobutyryl-CoA h	no	no	0.929	0.751	0.410	8e-55
Q5XIE6	385	3-hydroxyisobutyryl-CoA h	yes	no	0.894	0.724	0.399	2e-54
A2VDC2	385	3-hydroxyisobutyryl-CoA h	N/A	no	0.923	0.748	0.404	1e-53

>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1

 Score =  434 bits (1117), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/309 (70%), Positives = 260/309 (84%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRP ALNAL T+MG +L KL+K WE DPNIGFV MKGSGRAFCAGGDIVSLYH   +
Sbjct: 50  AILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRTR 109

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G  +  ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG GVSIPGTFRVA  +T+FATP
Sbjct: 110 GSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATP 169

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+ACGLATHY  SE++P++EE+
Sbjct: 170 ETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLACGLATHYIRSEEVPVMEEQ 229

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L KL+TDDPSV+E+CLEK +++ +P+K  VI RID+++KCF  DTVEEIIDSLE EAS  
Sbjct: 230 LKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEASRR 289

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            D WC +TLR LKE+SPLSLKV+LRSIREGR QT D+CL+REYRMSLQG+   +SG+F E
Sbjct: 290 KDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCE 349

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 350 GVRARLIDK 358

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -

>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1

 Score =  416 bits (1070), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 191/309 (61%), Positives = 251/309 (81%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILN PS+LNAL+  M  +L +L+++WE +P I FV MKGSG+ FC+G D++SLYH +N+
Sbjct: 54  AILNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINE 113

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G  EE K FF  LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA  KTV A P
Sbjct: 114 GNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHP 173

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  IGFHPDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE 
Sbjct: 174 EVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEER 233

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           +GKL+TDDP+VIE  L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA+  
Sbjct: 234 IGKLLTDDPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANS 293

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            + WC  TL+ +KEASPLSLK++L+SIREGRFQT D+CL  EYR+S+ GVS+++SGDF E
Sbjct: 294 CNEWCKKTLKQIKEASPLSLKITLQSIREGRFQTLDQCLTHEYRISICGVSKVVSGDFCE 353

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 354 GIRARLVDK 362

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana GN=At2g30660 PE=2 SV=1

 Score =  309 bits (792), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/307 (49%), Positives = 205/307 (66%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNAL  NM ++L +LF+A+E DP++  V +KG GRAFCAGGD+  +   M QGK
Sbjct: 20  LNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCAGGDVPPVVQNMVQGK 79

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DFFR  Y+  Y++ T+ KP V+ILNG+ MG GAGVSI G FR+A   TVFA PET
Sbjct: 80  WRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATENTVFAMPET 139

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
            +G  PD GAS++LS LPG  GE++ LTGA+L+GAE++ACGLATH+  S +L  +E +L 
Sbjct: 140 SLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATHFVPSTRLTALETDLC 199

Query: 184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
           K+ + DPS +   L+ Y+   +  + S  HR+D++D+CF   T+EEII +LE E +   D
Sbjct: 200 KVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTMEEIISALERETTQELD 259

Query: 244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 303
            W  +T+R LK++SP SLK+SLRSIREGR Q    CL REYRM    +   +S D  E  
Sbjct: 260 DWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYRMVCHVMKGDLSKDLVEGC 319

Query: 304 NFQILNK 310
              +++K
Sbjct: 320 RAILIDK 326

Involved in valine catabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/298 (48%), Positives = 202/298 (67%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCAGGD+ ++   +NQG 
Sbjct: 24  LNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDINQGN 83

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                ++F + Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G FR+A   TVFA PET
Sbjct: 84  WRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPET 143

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
            +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH+  S +L  +E +L 
Sbjct: 144 ALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLTALEADLC 203

Query: 184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
           ++ ++DP+     L+ Y+      + S   R+D++D+CF   TVEEII +LE EA+   D
Sbjct: 204 RINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVEEIISALEREATQEAD 263

Query: 244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            W  +T++ LK+ SP SLK+SLRSIREGR Q   +CL+REYRM    +   IS DF E
Sbjct: 264 GWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVE 321

Involved in valine catabolism. May be indirectly involved in benzoic acid biosynthesis and in cold signaling and cold tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis thaliana GN=At2g30650 PE=2 SV=1

 Score =  292 bits (747), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 145/307 (47%), Positives = 205/307 (66%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            NRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAF AGGDI  +   + QGK
Sbjct: 20  FNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGK 79

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L     +F+  Y+  Y+L T+ KP V+ILNG+ MGGGAG+S  G FR+A   TVFA PET
Sbjct: 80  LIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPET 139

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
            +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH+  S  L  +E EL 
Sbjct: 140 ALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELY 199

Query: 184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
           K+ + + + I   L+ Y++  + +++S  HR+D++D+CF   TVEEI  +LE E +   +
Sbjct: 200 KVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPN 259

Query: 244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 303
            W  +T++ L++ASP  LK+SLRSIREGR Q   +CL+REYRM    +   IS DF E  
Sbjct: 260 DWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGC 319

Query: 304 NFQILNK 310
              +++K
Sbjct: 320 RAVLIDK 326

Involved in valine catabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana GN=At1g06550 PE=2 SV=2

 Score =  259 bits (662), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 127/301 (42%), Positives = 192/301 (63%), Gaps = 2/301 (0%)

Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +  LNRP  LN ++  +  KL +  + WE D     + +KG+GRAF AGGD+   YH   
Sbjct: 23  LTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGGDLKVFYH--G 80

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           Q   + C +    +Y   Y + T+ K  V+++NG++MGGGA + +P  F V   KTVFAT
Sbjct: 81  QESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFAT 140

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PE   GFH D G S+  S LPGHLGEFLALTGA+LNG E++A G+ATH+  S KL  +E 
Sbjct: 141 PEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFVPSGKLMDLEA 200

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240
            L  L + D  V+++ +E++S+ V  DK+S++++  ++++CF  ++V++II + E+EAS 
Sbjct: 201 RLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQIIQAFEAEASK 260

Query: 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 300
             + W    ++ LK +SP  LK+ L+SIREGR QT  +CL +E+R++L  + + IS D Y
Sbjct: 261 DGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLNILRKTISPDMY 320

Query: 301 E 301
           E
Sbjct: 321 E 321

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1

 Score =  216 bits (551), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 9/288 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP  LNAL+ NM  ++    K WE DP+   + +KG+G +AFCAGGDI +L     + 
Sbjct: 50  LNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSE-AKKA 108

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           +    +D FR  Y     + +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PE
Sbjct: 109 RQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPE 168

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
           T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL
Sbjct: 169 TGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEEL 228

Query: 183 GKLVTDDPSVIEACLEKYSDLVYPDKNSVI---HRIDIVDKCFGLDTVEEIIDSLESEAS 239
             L +     +   LE Y      D++  I     +D ++ CF  +TVE+II++L  + S
Sbjct: 229 LALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS 288

Query: 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 287
               P+    ++++ + SP SLK++LR + EG  +T  E L+ EYR++
Sbjct: 289 ----PFAIEQMKVINKMSPTSLKITLRQLMEGSSKTLQEVLIMEYRIT 332

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2

 Score =  214 bits (544), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/302 (41%), Positives = 178/302 (58%), Gaps = 12/302 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP  LNAL  NM  ++    K WE DP    + +KG+G +AFCAGGDI  +     + 
Sbjct: 51  LNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISE-AEKA 109

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           K +    FFR  Y     +G+  KP+VA+++G+TMGGG G+S+ G FRVA  K +FA PE
Sbjct: 110 KQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPE 169

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
           T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EE+L
Sbjct: 170 TAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDL 229

Query: 183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
             L +     I + LE Y     +  DK+ ++   +D ++ CF  +TVEEII++L+ + S
Sbjct: 230 LALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGS 289

Query: 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                +    L+++ + SP SLK++LR + EG  +T  E L  EYR+S Q   R    DF
Sbjct: 290 ----SFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLS-QACMR--GHDF 342

Query: 300 YE 301
           +E
Sbjct: 343 HE 344

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2

 Score =  213 bits (541), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/288 (39%), Positives = 173/288 (60%), Gaps = 9/288 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP  LNAL+ NM  ++    K WE DP+   + +KG+G +AFCAGGDI +L      G
Sbjct: 50  LNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAG 109

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           +    +D FR  Y     + +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PE
Sbjct: 110 QTL-SQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPE 168

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
           T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL
Sbjct: 169 TGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEEL 228

Query: 183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
             L +     +   LE Y     +  DK+ +    +D ++ CF  +TVE+I+++L  + S
Sbjct: 229 LALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS 288

Query: 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS 287
               P+    ++++ + SP SLK++LR + EG  +T  E L  EYR++
Sbjct: 289 ----PFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLT 332

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/304 (40%), Positives = 179/304 (58%), Gaps = 16/304 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP ALNALN  M  ++    K WE DP    V +KG+G +AFCAGGDI ++    + G
Sbjct: 50  LNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAV---TDAG 106

Query: 63  KLEE--CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           K+ +   +DFFR  Y     +GT  KP+VA+++G+TMGGG G+S+ G FRVA  KT+FA 
Sbjct: 107 KVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAM 166

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PET IG  PD G  ++L  L G LG +LALTG +L G+++   G+ATH+  SEKL  +E+
Sbjct: 167 PETAIGLFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQ 226

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYP--DKNSVI-HRIDIVDKCFGLDTVEEIIDSLESE 237
           +L  + +     +   L+ Y    Y   DK  V+   +D ++  F  +TVEEI+++L+ +
Sbjct: 227 DLVAMKSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSGNTVEEIMENLKCD 286

Query: 238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISG 297
            S     +    L+ L   SP SLK++ R ++EG   +  E L  EYR+S   ++     
Sbjct: 287 GS----SFAMKQLQTLSTMSPTSLKITFRQLKEGASMSLQEVLTMEYRLSQACMN---GH 339

Query: 298 DFYE 301
           DFYE
Sbjct: 340 DFYE 343

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
255541138	415	catalytic, putative [Ricinus communis] g	0.990	0.744	0.766	1e-142
356504605	407	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.993	0.761	0.725	1e-134
357512815	401	3-hydroxyisobutyryl-CoA hydrolase-like p	0.993	0.773	0.716	1e-133
224136292	415	predicted protein [Populus trichocarpa]	0.990	0.744	0.763	1e-132
225453474	405	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.990	0.762	0.715	1e-128
449442604	406	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.990	0.761	0.715	1e-126
326507476	424	predicted protein [Hordeum vulgare subsp	0.990	0.728	0.682	1e-123
242035143	406	hypothetical protein SORBIDRAFT_01g02960	0.990	0.761	0.676	1e-123
223973415	406	unknown [Zea mays] gi|414867666|tpg|DAA4	0.990	0.761	0.676	1e-122
357147338	413	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.990	0.748	0.669	1e-122

>gi|255541138|ref|XP_002511633.1| catalytic, putative [Ricinus communis] gi|223548813|gb|EEF50302.1| catalytic, putative [Ricinus communis]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 237/309 (76%), Positives = 278/309 (89%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRPSALNALNTNMGA+L KL+K+WE +P++GFV MKGSGRAFCAGGDIV+LY+ + +
Sbjct: 60  AILNRPSALNALNTNMGARLLKLYKSWEENPDVGFVMMKGSGRAFCAGGDIVTLYNLVKK 119

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GKLE+CK+FFRTLY+FIY+LGT+LKPHVAIL+G+TMGGGAGVSIPGTFR+A  KTVFATP
Sbjct: 120 GKLEDCKEFFRTLYTFIYILGTYLKPHVAILDGITMGGGAGVSIPGTFRIATDKTVFATP 179

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ETLIGFHPDAGASF+LSHLPGHLGE+LALTG  LNG EM+ACGLATHYS SE+L LI+++
Sbjct: 180 ETLIGFHPDAGASFHLSHLPGHLGEYLALTGETLNGVEMIACGLATHYSYSERLQLIDQQ 239

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           LG+LVTDDPSVIEA LEKY DLV+PDK S +HRI+ VD+CFG DTVEEI ++LESEAS  
Sbjct: 240 LGQLVTDDPSVIEATLEKYGDLVHPDKMSALHRIETVDRCFGYDTVEEIFEALESEASGT 299

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           ND +C STLR LKEASPLSLKVSLRSIREGRFQT D+CLVREYRMSLQG+S+ IS DFYE
Sbjct: 300 NDAFCNSTLRRLKEASPLSLKVSLRSIREGRFQTLDQCLVREYRMSLQGISKQISNDFYE 359

Query: 302 VSNFQILNK 310
               +++++
Sbjct: 360 GVRARMVDR 368

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504605|ref|XP_003521086.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Glycine max]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 225/310 (72%), Positives = 268/310 (86%)

Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           MAILNRPSALNALNTNM A L+KL+++WE DP+IGFV +KGSGRAF AGGDIV+LYH +N
Sbjct: 54  MAILNRPSALNALNTNMAATLHKLYRSWEEDPDIGFVMLKGSGRAFAAGGDIVALYHLIN 113

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           +G LE CK+FFRT YSF+YL+GT+LKPHVA+LNG+TMGGGAG+SIPGTFRVA  KT+FAT
Sbjct: 114 KGNLEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGISIPGTFRVATDKTIFAT 173

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PE LIGFHPDA ASFYLSHLPG LGE+LALTG KLNG EM+ACGLATHYS S +LPLIEE
Sbjct: 174 PEVLIGFHPDAAASFYLSHLPGQLGEYLALTGEKLNGVEMVACGLATHYSSSARLPLIEE 233

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240
           +LGKLVTDDPSVIE  LE+Y ++V+ D +SV+ RI+++DKCF  DTVEEI+D++E+ AS 
Sbjct: 234 QLGKLVTDDPSVIETTLEQYGEIVHLDSSSVLQRIEVLDKCFCHDTVEEIVDAMENAASE 293

Query: 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 300
            ND WC STL  LKEASPLSLKV+LRSIREGRFQT D+CL+REYRM+LQ + R ISGDF 
Sbjct: 294 TNDAWCISTLNKLKEASPLSLKVALRSIREGRFQTLDQCLLREYRMTLQAIHRQISGDFC 353

Query: 301 EVSNFQILNK 310
           E    ++++K
Sbjct: 354 EGVRARVVDK 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512815|ref|XP_003626696.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula] gi|355520718|gb|AET01172.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 222/310 (71%), Positives = 267/310 (86%)

Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +A+LNRPS+LNA+NTNM A+L+KL+++WE++P+IGFV +KG+GRAF AGGDIVSLY F+ 
Sbjct: 48  LALLNRPSSLNAINTNMAARLHKLYRSWEDNPDIGFVMLKGTGRAFAAGGDIVSLYRFIK 107

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           QG LE CK FFRT YSFIYL+GT+LKPHVA+LNG+TMGGGAG+SIPGTFR+A  KTVFAT
Sbjct: 108 QGNLEACKQFFRTAYSFIYLIGTYLKPHVALLNGITMGGGAGISIPGTFRLATDKTVFAT 167

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PE LIGFHPDA ASFYLS LPGH+GE+LALTG KLNG EM+ACGLATHYS+  +LPLIEE
Sbjct: 168 PEVLIGFHPDAAASFYLSRLPGHIGEYLALTGEKLNGVEMVACGLATHYSLLARLPLIEE 227

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240
           +LGKLVTDDPSVIE  LE+Y DLV+P  +SV+ R++I+DKCFG DTVEEI+D+LE  A  
Sbjct: 228 QLGKLVTDDPSVIETTLEQYGDLVHPGSSSVLQRLEILDKCFGHDTVEEIVDALEVAAGQ 287

Query: 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 300
             D WC STL  LKEASPLSLKVSLRSIREGRFQT D+CL+REYRM+LQ +S+ ISGDF 
Sbjct: 288 TKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLLREYRMTLQAISKQISGDFC 347

Query: 301 EVSNFQILNK 310
           E    ++++K
Sbjct: 348 EGVRARVVDK 357

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136292|ref|XP_002326825.1| predicted protein [Populus trichocarpa] gi|222835140|gb|EEE73575.1| predicted protein [Populus trichocarpa]

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/309 (76%), Positives = 271/309 (87%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRPSALNALNTNMGA+L KL+KAWE D ++GFV++KGSGRAF AGGDIV+LYH +NQ
Sbjct: 63  AILNRPSALNALNTNMGARLLKLYKAWEKDSSVGFVTLKGSGRAFSAGGDIVNLYHLINQ 122

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GK E C++FF TLY+FIY+LGT+LKPHVAILNG+TMGGG G+SIPGTFR+A  KTVFATP
Sbjct: 123 GKWEACREFFGTLYTFIYVLGTYLKPHVAILNGITMGGGTGISIPGTFRLATDKTVFATP 182

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ETLIGFHPDAGASF+LSHLPGHLGE+LALTG  LNGAEM+ACGLATHY+ SEKL L+E  
Sbjct: 183 ETLIGFHPDAGASFFLSHLPGHLGEYLALTGGTLNGAEMIACGLATHYTNSEKLHLVEHH 242

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           LGKLVTDDPSVIE  LE+Y DLVYPDK SV+HRI++VDKCF  DTVEEI D+LE EA+  
Sbjct: 243 LGKLVTDDPSVIETSLEQYGDLVYPDKMSVLHRIEMVDKCFSHDTVEEIFDALEREAAET 302

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           ND W  STLR LKEASPLSLKVSLRSI+EGRFQT D+CLVREYRMSLQG+S+ ISGDF E
Sbjct: 303 NDAWFNSTLRRLKEASPLSLKVSLRSIQEGRFQTLDQCLVREYRMSLQGISKQISGDFCE 362

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 363 GVRARMVDK 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453474|ref|XP_002274299.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial [Vitis vinifera] gi|297734569|emb|CBI16620.3| unnamed protein product [Vitis vinifera]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/309 (71%), Positives = 261/309 (84%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRP  LNALNT+MGA+L  L+K+WE +P+IGFV MKGSGRAFCAGGDIV LY+ +N+
Sbjct: 53  AILNRPHVLNALNTSMGARLQNLYKSWEENPDIGFVVMKGSGRAFCAGGDIVGLYNLINK 112

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G++E+CK+FF T+YSFIYL+GT+LKP+VAIL+G+TMGGGAGVSIPG FRVA  +TVFATP
Sbjct: 113 GRIEDCKEFFGTVYSFIYLVGTYLKPNVAILDGITMGGGAGVSIPGMFRVATDRTVFATP 172

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ETLIGFH DAGASF+LSHLPG+ GE+LALTG KLNG EM+ACGLATHY+ S KLPLIEE 
Sbjct: 173 ETLIGFHTDAGASFHLSHLPGYWGEYLALTGEKLNGPEMIACGLATHYAPSAKLPLIEEG 232

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           LGKLVTDDPSVIEA LE+Y  L+ PD   ++ RI+ +DKCF   TVEEIID+LESE +  
Sbjct: 233 LGKLVTDDPSVIEASLEQYGSLISPDNRGLLQRIETLDKCFSHGTVEEIIDALESETART 292

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            DPWC STL+ LKEASPLSLKV LRSIREGRFQT D+CLVREYRMS+QG+S  IS DF E
Sbjct: 293 QDPWCSSTLKRLKEASPLSLKVCLRSIREGRFQTLDQCLVREYRMSVQGISGQISNDFCE 352

Query: 302 VSNFQILNK 310
               +++ K
Sbjct: 353 GIRARMVEK 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442604|ref|XP_004139071.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Cucumis sativus]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/309 (71%), Positives = 266/309 (86%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRPS LNALNTNMGA+L++L+ +WE +P++GFV +KGSGRAFCAGGDIVSLYH +N+
Sbjct: 54  AILNRPSILNALNTNMGARLHELYNSWEENPDVGFVVLKGSGRAFCAGGDIVSLYHMINE 113

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G++E CK FF TLY+FIY++GT+LKPHVAILNG+TMGGG G+SIPGTFRVA  KTVFATP
Sbjct: 114 GEIEHCKKFFSTLYAFIYMVGTYLKPHVAILNGITMGGGTGISIPGTFRVATDKTVFATP 173

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ETLIGFHPDAGASF+LSHLPG +GE+L LTG KL G EM+ACG+ATHYS S +LPLIEE 
Sbjct: 174 ETLIGFHPDAGASFHLSHLPGRMGEYLGLTGEKLKGEEMVACGVATHYSHSSRLPLIEEH 233

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           LG LVTDD S++E+ L K+ D V+ DK SV+HRI+I+DKCF  DTVEEIIDSLE E+S  
Sbjct: 234 LGNLVTDDASIVESSLNKFGDRVHLDKTSVLHRIEILDKCFSHDTVEEIIDSLEIESSKT 293

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            DPWC STL+ LKEASPLSLKVSL+SIREGR+QT D+CL+REYRMSLQG+S+ IS DF E
Sbjct: 294 KDPWCISTLKRLKEASPLSLKVSLKSIREGRYQTLDQCLIREYRMSLQGISKQISSDFCE 353

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 354 GVRARLVDK 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326507476|dbj|BAK03131.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/309 (68%), Positives = 260/309 (84%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           ++LNRP  LNAL T MGA+LNK +++WE+ P+IGFV MKGSGRAFCAGGD+V L   +N+
Sbjct: 72  SVLNRPGHLNALTTTMGARLNKFYESWEDSPDIGFVMMKGSGRAFCAGGDVVGLRQLINE 131

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GKL+E KDFFRTLYSFIY+LGT+LKPHVAIL+GVTMGGG GVSIPGTFRVA  +TVFATP
Sbjct: 132 GKLDESKDFFRTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGTFRVATDRTVFATP 191

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  IGFHPDA ASFYLSHL GH+GE+LALTG KLNG +M+A GLATHYS+S+ L L++E 
Sbjct: 192 EVHIGFHPDAAASFYLSHLTGHVGEYLALTGEKLNGVDMLALGLATHYSMSDHLDLVDER 251

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L KLVTDDPSVI++ L +Y DLVYPDK S++HR+ ++DKCF  +TVEEI+D+LESEA+ +
Sbjct: 252 LAKLVTDDPSVIDSSLAQYGDLVYPDKTSIVHRLAVIDKCFSHETVEEIVDALESEAAQL 311

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           N+ WC   L+ LKEASPL+LKVSLRSIREGR+QT DECLVREYRMS+ G+S+ +  DF E
Sbjct: 312 NEEWCTLALKRLKEASPLALKVSLRSIREGRYQTLDECLVREYRMSVNGISKPLYHDFCE 371

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 372 GVRARLVDK 380

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242035143|ref|XP_002464966.1| hypothetical protein SORBIDRAFT_01g029600 [Sorghum bicolor] gi|241918820|gb|EER91964.1| hypothetical protein SORBIDRAFT_01g029600 [Sorghum bicolor]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 258/309 (83%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           A+LNRP  LNAL T MGA+LNK +++WE++P+IGFV MKGSGRAFCAGGD+V L   +++
Sbjct: 54  AVLNRPGYLNALTTTMGARLNKFYESWEDNPDIGFVMMKGSGRAFCAGGDVVRLRELISE 113

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GKLEECKDFF+TLY FIY LGT+LKPH+AIL+GVTMGGG GVSIPGTFR+A  +TVFATP
Sbjct: 114 GKLEECKDFFKTLYMFIYFLGTYLKPHIAILDGVTMGGGGGVSIPGTFRIATDRTVFATP 173

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  IGFHPDA ASFYLSHL GH+GE++ALTG KLNG +M+A GLATHYS+S  L LI+E 
Sbjct: 174 EVHIGFHPDAAASFYLSHLTGHVGEYVALTGEKLNGTDMIALGLATHYSMSGHLDLIDER 233

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L KLVTDDPSVI++ L +Y D+VYPDK S++HR++++DKCF  DTVEEI+D+LESEA+  
Sbjct: 234 LAKLVTDDPSVIDSSLAQYGDMVYPDKESIVHRLEVIDKCFSHDTVEEIVDALESEAASS 293

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           N+ WC   L+ LKEASPL+LKVSLRSIREGR+QT DECLVREYRMS+ G+S+  S +F E
Sbjct: 294 NEEWCTLALKRLKEASPLALKVSLRSIREGRYQTLDECLVREYRMSMNGISKQFSHEFCE 353

Query: 302 VSNFQILNK 310
               +++ K
Sbjct: 354 GVRARLVEK 362

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223973415|gb|ACN30895.1| unknown [Zea mays] gi|414867666|tpg|DAA46223.1| TPA: hypothetical protein ZEAMMB73_952637 [Zea mays]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 259/309 (83%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           A+LNRP  LNAL T MGA+LNK +++WE++P+IGFV MKGSGRAFCAGGD+V L+  +++
Sbjct: 54  AVLNRPGYLNALTTTMGARLNKFYQSWEDNPDIGFVMMKGSGRAFCAGGDVVRLHELISE 113

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GKLEECKDFF+TLY FIY LGT+LKPHVAIL+G+TMGGG GVSIPGTFRVA  +TVFATP
Sbjct: 114 GKLEECKDFFKTLYMFIYFLGTYLKPHVAILDGITMGGGGGVSIPGTFRVATDRTVFATP 173

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  IGFHPDA ASFYLSHL GH+GE++ALTG KLNG +M+A GLATHY +S  L LI+E 
Sbjct: 174 EVHIGFHPDAAASFYLSHLTGHVGEYVALTGEKLNGTDMIALGLATHYFMSGHLDLIDER 233

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L KLVTDDPSVI++ L +Y D+VYPDK S++HR++++DKCF  DTVEEI+D+LESEA+  
Sbjct: 234 LAKLVTDDPSVIDSSLAQYGDMVYPDKKSIVHRLEVIDKCFSHDTVEEIVDALESEAASS 293

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           N+ WC   L+ LKEASPL+LKVSLRSIREGR+QT DECLVREYRMS+ G+S+  S +F E
Sbjct: 294 NEEWCILALKRLKEASPLALKVSLRSIREGRYQTLDECLVREYRMSMNGISKQFSHEFCE 353

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 354 GVRARLVDK 362

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357147338|ref|XP_003574307.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial-like [Brachypodium distachyon]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/309 (66%), Positives = 259/309 (83%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           A+LNRP  LNAL T MGA+LNK +++WE+ P+IGFV MKGSGRAFCAGGD+V L+  +++
Sbjct: 61  AVLNRPGHLNALTTTMGARLNKFYESWEDSPDIGFVMMKGSGRAFCAGGDVVGLHQLISE 120

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GK++E KDFFRTLYSFIY+LGT+LKPHVAIL+GVTMGGG GVSIPGTFR+A  +TVFATP
Sbjct: 121 GKMDEGKDFFRTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGTFRIATDRTVFATP 180

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  IGFHPDA ASFYLSHL GH+GE+LALTG +LNG +M+A GLATHYS+SE L L++E 
Sbjct: 181 EVHIGFHPDAAASFYLSHLTGHVGEYLALTGERLNGVDMLALGLATHYSMSEHLDLVDER 240

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L  LVTDDPSVI+  L +Y DLVYPDK S++HR++++DKCF  +TVEEI+D+LE EA+ +
Sbjct: 241 LATLVTDDPSVIDTSLAQYGDLVYPDKKSIVHRLEVIDKCFSHETVEEIVDALEGEAARL 300

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
           N+ WC   L+ LKEASPL+LKVSLRSIREGR+QT DECLVREYRMS+ G+S+  S +F E
Sbjct: 301 NEEWCTLALKRLKEASPLALKVSLRSIREGRYQTLDECLVREYRMSINGISKPFSHEFCE 360

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 361 GVRARLVDK 369

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2116797	409	AT4G31810 [Arabidopsis thalian	0.990	0.755	0.618	8.3e-106
TAIR|locus:2054437	378	AT2G30660 [Arabidopsis thalian	0.983	0.812	0.491	1.7e-75
TAIR|locus:2152069	378	CHY1 "beta-hydroxyisobutyryl-C	0.955	0.788	0.486	1.1e-73
TAIR|locus:2054517	378	AT2G30650 [Arabidopsis thalian	0.980	0.809	0.473	1.1e-71
TAIR|locus:2009180	387	AT1G06550 [Arabidopsis thalian	0.958	0.772	0.421	9.7e-64
UNIPROTKB|Q6NVY1	386	HIBCH "3-hydroxyisobutyryl-CoA	0.958	0.774	0.401	3.8e-53
MGI|MGI:1923792	385	Hibch "3-hydroxyisobutyryl-Coe	0.958	0.776	0.389	5.6e-52
RGD|1308392	385	Hibch "3-hydroxyisobutyryl-CoA	0.958	0.776	0.385	5.6e-52
FB|FBgn0038326	386	CG5044 [Drosophila melanogaste	0.942	0.761	0.394	9.2e-52
UNIPROTKB|Q2HJ73	386	HIBCH "3-hydroxyisobutyryl-CoA	0.958	0.774	0.389	1.1e-50

TAIR|locus:2116797 AT4G31810 [Arabidopsis thaliana (taxid:3702)]

 Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
 Identities = 191/309 (61%), Positives = 251/309 (81%)

Query:     2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
             AILN PS+LNAL+  M  +L +L+++WE +P I FV MKGSG+ FC+G D++SLYH +N+
Sbjct:    54 AILNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINE 113

Query:    62 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             G  EE K FF  LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA  KTV A P
Sbjct:   114 GNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHP 173

Query:   122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
             E  IGFHPDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE 
Sbjct:   174 EVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEER 233

Query:   182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
             +GKL+TDDP+VIE  L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA+  
Sbjct:   234 IGKLLTDDPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANS 293

Query:   242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
              + WC  TL+ +KEASPLSLK++L+SIREGRFQT D+CL  EYR+S+ GVS+++SGDF E
Sbjct:   294 CNEWCKKTLKQIKEASPLSLKITLQSIREGRFQTLDQCLTHEYRISICGVSKVVSGDFCE 353

Query:   302 VSNFQILNK 310
                 ++++K
Sbjct:   354 GIRARLVDK 362

GO:0003824 "catalytic activity" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010388 "cullin deneddylation" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

TAIR|locus:2054437 AT2G30660 [Arabidopsis thaliana (taxid:3702)]

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 151/307 (49%), Positives = 205/307 (66%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
             LNRP  LNAL  NM ++L +LF+A+E DP++  V +KG GRAFCAGGD+  +   M QGK
Sbjct:    20 LNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCAGGDVPPVVQNMVQGK 79

Query:    64 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                  DFFR  Y+  Y++ T+ KP V+ILNG+ MG GAGVSI G FR+A   TVFA PET
Sbjct:    80 WRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATENTVFAMPET 139

Query:   124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
              +G  PD GAS++LS LPG  GE++ LTGA+L+GAE++ACGLATH+  S +L  +E +L 
Sbjct:   140 SLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATHFVPSTRLTALETDLC 199

Query:   184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
             K+ + DPS +   L+ Y+   +  + S  HR+D++D+CF   T+EEII +LE E +   D
Sbjct:   200 KVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTMEEIISALERETTQELD 259

Query:   244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS 303
              W  +T+R LK++SP SLK+SLRSIREGR Q    CL REYRM    +   +S D  E  
Sbjct:   260 DWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYRMVCHVMKGDLSKDLVEGC 319

Query:   304 NFQILNK 310
                +++K
Sbjct:   320 RAILIDK 326

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

TAIR|locus:2152069 CHY1 "beta-hydroxyisobutyryl-CoA hydrolase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 145/298 (48%), Positives = 202/298 (67%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
             LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCAGGD+ ++   +NQG 
Sbjct:    24 LNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDINQGN 83

Query:    64 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                  ++F + Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G FR+A   TVFA PET
Sbjct:    84 WRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPET 143

Query:   124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
              +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH+  S +L  +E +L 
Sbjct:   144 ALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLTALEADLC 203

Query:   184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
             ++ ++DP+     L+ Y+      + S   R+D++D+CF   TVEEII +LE EA+   D
Sbjct:   204 RINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVEEIISALEREATQEAD 263

Query:   244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
              W  +T++ LK+ SP SLK+SLRSIREGR Q   +CL+REYRM    +   IS DF E
Sbjct:   264 GWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVE 321

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IGI;IDA

GO:0006574 "valine catabolic process" evidence=NAS;IMP

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0009733 "response to auxin stimulus" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

TAIR|locus:2054517 AT2G30650 [Arabidopsis thaliana (taxid:3702)]

 Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
 Identities = 145/306 (47%), Positives = 205/306 (66%)

Query:     5 NRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 64
             NRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAF AGGDI  +   + QGKL
Sbjct:    21 NRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKL 80

Query:    65 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL 124
                  +F+  Y+  Y+L T+ KP V+ILNG+ MGGGAG+S  G FR+A   TVFA PET 
Sbjct:    81 IRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETA 140

Query:   125 IGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK 184
             +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH+  S  L  +E EL K
Sbjct:   141 LGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYK 200

Query:   185 LVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDP 244
             + + + + I   L+ Y++  + +++S  HR+D++D+CF   TVEEI  +LE E +   + 
Sbjct:   201 VGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPND 260

Query:   245 WCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN 304
             W  +T++ L++ASP  LK+SLRSIREGR Q   +CL+REYRM    +   IS DF E   
Sbjct:   261 WLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCR 320

Query:   305 FQILNK 310
               +++K
Sbjct:   321 AVLIDK 326

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2009180 AT1G06550 [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 127/301 (42%), Positives = 192/301 (63%)

Query:     1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
             +  LNRP  LN ++  +  KL +  + WE D     + +KG+GRAF AGGD+   YH   
Sbjct:    23 LTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGGDLKVFYH--G 80

Query:    61 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
             Q   + C +    +Y   Y + T+ K  V+++NG++MGGGA + +P  F V   KTVFAT
Sbjct:    81 QESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKTVFAT 140

Query:   121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
             PE   GFH D G S+  S LPGHLGEFLALTGA+LNG E++A G+ATH+  S KL  +E 
Sbjct:   141 PEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFVPSGKLMDLEA 200

Query:   181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240
              L  L + D  V+++ +E++S+ V  DK+S++++  ++++CF  ++V++II + E+EAS 
Sbjct:   201 RLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQIIQAFEAEASK 260

Query:   241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 300
               + W    ++ LK +SP  LK+ L+SIREGR QT  +CL +E+R++L  + + IS D Y
Sbjct:   261 DGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLNILRKTISPDMY 320

Query:   301 E 301
             E
Sbjct:   321 E 321

GO:0003824 "catalytic activity" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

UNIPROTKB|Q6NVY1 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 125/311 (40%), Positives = 182/311 (58%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
             LNRP  LNAL  NM  ++    K WE DP    + +KG+G +AFCAGGDI  +     + 
Sbjct:    51 LNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISE-AEKA 109

Query:    63 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             K +    FFR  Y     +G+  KP+VA+++G+TMGGG G+S+ G FRVA  K +FA PE
Sbjct:   110 KQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPE 169

Query:   123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EE+L
Sbjct:   170 TAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDL 229

Query:   183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
               L +     I + LE Y     +  DK+ ++   +D ++ CF  +TVEEII++L+ + S
Sbjct:   230 LALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGS 289

Query:   240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                  +    L+++ + SP SLK++LR + EG  +T  E L  EYR+S Q   R    DF
Sbjct:   290 ----SFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLS-QACMR--GHDF 342

Query:   300 YEVSNFQILNK 310
             +E     +++K
Sbjct:   343 HEGVRAVLIDK 353

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0006574 "valine catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0009083 "branched-chain amino acid catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

MGI|MGI:1923792 Hibch "3-hydroxyisobutyryl-Coenzyme A hydrolase" [Mus musculus (taxid:10090)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 121/311 (38%), Positives = 184/311 (59%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
             LNRP  LNAL+ NM  ++    K WE DP+   + +KG+G +AFCAGGDI +L     + 
Sbjct:    50 LNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSE-AKKA 108

Query:    63 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             +    +D FR  Y     + +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PE
Sbjct:   109 RQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPE 168

Query:   123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL
Sbjct:   169 TGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEEL 228

Query:   183 GKLVTDDPSVIEACLEKYSDLVYPDKN-SVI--HRIDIVDKCFGLDTVEEIIDSLESEAS 239
               L +     +   LE Y      D++ S+I    +D ++ CF  +TVE+II++L  + S
Sbjct:   229 LALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS 288

Query:   240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                 P+    ++++ + SP SLK++LR + EG  +T  E L+ EYR++ Q        DF
Sbjct:   289 ----PFAIEQMKVINKMSPTSLKITLRQLMEGSSKTLQEVLIMEYRIT-QACME--GHDF 341

Query:   300 YEVSNFQILNK 310
             +E     +++K
Sbjct:   342 HEGVRAVLIDK 352

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009083 "branched-chain amino acid catabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

RGD|1308392 Hibch "3-hydroxyisobutyryl-CoA hydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 120/311 (38%), Positives = 182/311 (58%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
             LNRP  LNAL+ NM  ++    K WE DP+   + +KG+G +AFCAGGDI +L      G
Sbjct:    50 LNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAG 109

Query:    63 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             +    +D FR  Y     + +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PE
Sbjct:   110 QTLS-QDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPE 168

Query:   123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL
Sbjct:   169 TGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEEL 228

Query:   183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
               L +     +   LE Y     +  DK+ +    +D ++ CF  +TVE+I+++L  + S
Sbjct:   229 LALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS 288

Query:   240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                 P+    ++++ + SP SLK++LR + EG  +T  E L  EYR++ Q        DF
Sbjct:   289 ----PFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLT-QACME--GHDF 341

Query:   300 YEVSNFQILNK 310
             +E     +++K
Sbjct:   342 HEGVRAVLIDK 352

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006574 "valine catabolic process" evidence=IEA

FB|FBgn0038326 CG5044 [Drosophila melanogaster (taxid:7227)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 123/312 (39%), Positives = 185/312 (59%)

Query:     1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFM 59
             M ILNRP ALNA+N  M  K+ K  K  E   ++  V +KG+G +AFCAGGD+ +L   +
Sbjct:    57 MIILNRPKALNAINLEMVRKIYKHLKKCEKSKSL--VIIKGTGDKAFCAGGDVRAL---V 111

Query:    60 NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
               G  +E K FFR  YS   L+G +  P++AI++G+TMGGG G+S+ G +RVA  +T+FA
Sbjct:   112 EAGPTDESKSFFREEYSTNALIGNYKIPYIAIIDGITMGGGVGLSVHGKYRVASDRTLFA 171

Query:   120 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 179
              PET IG  PD G S++L  L G LG +L LTG +L GA++   G+ATHY  S K+P +E
Sbjct:   172 MPETAIGLFPDVGGSYFLPRLQGKLGLYLGLTGYRLRGADVYYSGIATHYCESSKIPDLE 231

Query:   180 EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI-DIVDKCFGLDTVEEIIDSLESEA 238
               L  L   D   +   L+KY     P+K   +  + + ++K F  D+VE I+++L+++ 
Sbjct:   232 TAL--LNCPDADDVPELLQKYHSP--PEKPFSLQPVLEQINKNFSADSVEGILENLQNDG 287

Query:   239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGD 298
             S     W   TL  L + SP S+KV+ R +  G   +  +CL+ EYR++++ + R    D
Sbjct:   288 S----EWAKKTLETLSKMSPTSMKVTFRQLELGSQLSLAQCLIMEYRLAVRHLER---SD 340

Query:   299 FYEVSNFQILNK 310
             F E     +++K
Sbjct:   341 FKEGVRALLIDK 352

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|Q2HJ73 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 121/311 (38%), Positives = 179/311 (57%)

Query:     4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
             LNRP  LN L   M  ++    K WE DP    + +KG+G +AFCAGGDI +L    N  
Sbjct:    51 LNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTN 110

Query:    63 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             + +  +D FR  Y     + +  KP++A+++G+TMGGG GVS+ G FRVA  K+VFA PE
Sbjct:   111 Q-KMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPE 169

Query:   123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+   EKL ++EE+L
Sbjct:   170 TAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDL 229

Query:   183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
               L +     I   LE Y        DK  ++   +D ++  F  +TVE+I+D+L+ + S
Sbjct:   230 LALKSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSANTVEQIVDNLQQDGS 289

Query:   240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                  +    L+++K+ SP SLK++LR + EG  +T  E L+ EYR+S Q   +    DF
Sbjct:   290 ----SFALEQLKVIKKMSPTSLKITLRQLMEGSSKTLPEVLIMEYRLS-QACMK--GHDF 342

Query:   300 YEVSNFQILNK 310
             +E     +++K
Sbjct:   343 HEGVRAVLIDK 353

GO:0006574 "valine catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5XF59	HIBC4_ARATH	3, ., 1, ., 2, ., -	0.7022	0.9903	0.7705	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.2	0.766
3rd Layer	3.1.2.4	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.40.97.1	hypothetical protein (381 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_VIII0916	enoyl-CoA hydratase (EC-4.2.1.17) (265 aa)			•			•		•	0.907
	grail3.0006050201	enoyl-CoA hydratase (EC-4.2.1.17) (265 aa)			•			•		•	0.907
	estExt_fgenesh4_pg.C_LG_VI1023	SubName- Full=Putative uncharacterized protein; (380 aa)			•			•		•	0.907
	eugene3.00013051	hypothetical protein (348 aa)	•	•				•			0.900

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
PLN02851	407	PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol	1e-175
PLN02157	401	PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol	1e-164
PLN02874	379	PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol	1e-120
PLN02988	381	PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol	1e-101
PRK05617	342	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol	1e-100
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	7e-40
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	6e-37
pfam13766	117	pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal	1e-27
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	1e-22
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	1e-20
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	3e-17
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	7e-17
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	9e-17
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	3e-16
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	1e-15
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	5e-15
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	2e-14
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	7e-14
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	1e-13
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	3e-13
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	6e-13
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	6e-13
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	7e-13
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	1e-12
PRK06023	251	PRK06023, PRK06023, enoyl-CoA hydratase; Provision	2e-12
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	3e-12
PRK07659	260	PRK07659, PRK07659, enoyl-CoA hydratase; Provision	5e-12
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	8e-12
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	1e-11
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	2e-11
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	2e-11
PRK06142	272	PRK06142, PRK06142, enoyl-CoA hydratase; Provision	1e-10
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	8e-10
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	1e-09
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	1e-09
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	2e-09
TIGR02441	737	TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c	2e-09
PRK07260	255	PRK07260, PRK07260, enoyl-CoA hydratase; Provision	3e-09
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	3e-09
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	4e-09
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	4e-09
PRK09120	275	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata	6e-09
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	6e-08
PRK12478	298	PRK12478, PRK12478, enoyl-CoA hydratase; Provision	7e-08
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	8e-08
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	2e-07
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	5e-07
PRK08139	266	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	3e-06
PRK08258	277	PRK08258, PRK08258, enoyl-CoA hydratase; Provision	4e-06
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	4e-06
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	4e-06
TIGR03200	360	TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car	6e-06
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	9e-06
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	1e-05
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	1e-05
PRK07827	260	PRK07827, PRK07827, enoyl-CoA hydratase; Provision	1e-05
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	2e-05
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	3e-05
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	9e-05
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	2e-04
PRK08259	254	PRK08259, PRK08259, enoyl-CoA hydratase; Provision	4e-04
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	7e-04
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	0.002
TIGR03189	251	TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar	0.003
TIGR02440	699	TIGR02440, FadJ, fatty oxidation complex, alpha su	0.004

>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  489 bits (1261), Expect = e-175
 Identities = 204/300 (68%), Positives = 252/300 (84%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRPS+LNAL   M A+L +L+++WE +P+IGFV MKGSGRAFC+G D+VSLYH +N+
Sbjct: 55  AILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINE 114

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G +EECK FF  LY F+YL GT+LKP+VAI++G+TMG GAG+SIPG FRV   KTVFA P
Sbjct: 115 GNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHP 174

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           E  +GFHPDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE 
Sbjct: 175 EVQMGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEER 234

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           LGKL+TDDP+VIE  L +Y DLVYPDK+SV+H+I+ +DKCFG DTVEEII++LE+EA+  
Sbjct: 235 LGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASS 294

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            D WC   L+ +KEASPLSLKV+L+SIREGRFQT D+CL REYR+SL GVS+ +SGDF E
Sbjct: 295 YDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCE 354

Length = 407

>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  463 bits (1192), Expect = e-164
 Identities = 216/309 (69%), Positives = 259/309 (83%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           AILNRP ALNAL T+MG +L KL+K WE DPNIGFV MKGSGRAFCAGGDIVSLYH   +
Sbjct: 50  AILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKR 109

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           G  +  ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG GVSIPGTFRVA  +T+FATP
Sbjct: 110 GSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATP 169

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
           ET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+ACGLATHY  SE++P++EE+
Sbjct: 170 ETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQ 229

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
           L KL+TDDPSV+E+CLEK +++ +P+K  VI RID+++KCF  DTVEEIIDSLE EA   
Sbjct: 230 LKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGRR 289

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            D WC +TLR LKE+SPLSLKV+LRSIREGR QT D+CL+REYRMSLQG+   +SG+F E
Sbjct: 290 KDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCE 349

Query: 302 VSNFQILNK 310
               ++++K
Sbjct: 350 GVRARLIDK 358

Length = 401

>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  349 bits (896), Expect = e-120
 Identities = 135/301 (44%), Positives = 199/301 (66%), Gaps = 2/301 (0%)

Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +  LNRP  LN ++ ++ + L +  + WE D ++  + +KG+GRAF AGGD+   Y    
Sbjct: 23  VITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYD--G 80

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           +   + C +    +Y   Y + T+ K  VA+++G+ MGGGAG+ +P  FRV   KTVFAT
Sbjct: 81  RESDDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFAT 140

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PE  +GFH D G S+ LS LPGHLGE+LALTGA+LNG EM+ACGLATH+  SEKLP +E+
Sbjct: 141 PEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLATHFVPSEKLPELEK 200

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL 240
            L  L + D S ++  +E++S  V  D++S++++   +++CF  DTVEEII + ESEAS 
Sbjct: 201 RLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASK 260

Query: 241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFY 300
             + W   TL+ L+ +SP  LK++LRSIREGR Q+  ECL +E+R+++  +   +S D Y
Sbjct: 261 TGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVY 320

Query: 301 E 301
           E
Sbjct: 321 E 321

Length = 379

>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase

 Score =  302 bits (775), Expect = e-101
 Identities = 147/298 (49%), Positives = 201/298 (67%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCAGGD+ ++   + QG 
Sbjct: 24  LNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGN 83

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                +FF   Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G FR+A   TVFA PET
Sbjct: 84  WRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPET 143

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 183
            +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH+  S +L  +E +L 
Sbjct: 144 ALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSTRLTALEADLC 203

Query: 184 KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIND 243
           ++ ++DP+     L+ Y+        S  HR+D++D+CF   TVEEII +LE EA+   D
Sbjct: 204 RIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEEIISALEREATQEAD 263

Query: 244 PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            W  +T++ LK+ASP SLK+SLRSIREGR Q   +CL+REYRM    +   IS DF E
Sbjct: 264 GWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVE 321

Length = 381

>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional

 Score =  297 bits (762), Expect = e-100
 Identities = 116/300 (38%), Positives = 171/300 (57%), Gaps = 11/300 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP ALNAL+  M   ++    AWE+D  +  V ++G+G R FCAGGDI +LY     G
Sbjct: 18  LNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAG 77

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                  FFR  Y    L+  + KP++A+++G+ MGGG G+S  G+ R+   +T  A PE
Sbjct: 78  DPLAADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPE 137

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
           T IGF PD G +++LS  PG LG +LALTGA+++ A+ +  GLA H+  S  LP + + L
Sbjct: 138 TGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLADHFVPSADLPALLDAL 197

Query: 183 GKLVTDDPS-VIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 241
             L  D  + V++A L  ++       + +  +   +D+CF  DTVE+II +LE++    
Sbjct: 198 ISLRWDSGADVVDAALAAFA--TPAPASELAAQRAWIDECFAGDTVEDIIAALEADG--- 252

Query: 242 NDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
              +   T   L+  SP SLKV+L  +R  R  T +ECL RE R++L  +    S DF E
Sbjct: 253 -GEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVE 308

Length = 342

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score =  138 bits (349), Expect = 7e-40
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 3/173 (1%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NAL+  M  +L       E DP++  V + G+G+AFCAG D+  L    + G 
Sbjct: 14  LNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAG- 72

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            EE + F R L   +  L    KP +A +NG  +GGG  +++    R+A     F  PE 
Sbjct: 73  -EEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEV 131

Query: 124 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175
            +G  P  G +  L  L G      L LTG +++  E +  GL       E+L
Sbjct: 132 KLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDEEL 184

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score =  132 bits (333), Expect = 6e-37
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 5/178 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNALN  M  +L +     E DP++  V + G+G+AF AG D+         G 
Sbjct: 20  LNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADL-KELLSPEDGN 78

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E  +  +     +  L    KP +A +NG  +GGG  +++    R+A     F  PE 
Sbjct: 79  AAE--NLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEV 136

Query: 124 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
            +G  P  G +  L  L G      L LTG  ++ AE +  GL     V +   L+E 
Sbjct: 137 NLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDE-VVPDAEELLER 193

Length = 257

>gnl|CDD|205939 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal region

 Score =  103 bits (260), Expect = 1e-27
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 7/89 (7%)

Query: 213 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGR 272
              + +D+CF  DTVEEI+ +LE++       W   TL+ L+  SPLSLKV+L  +R GR
Sbjct: 3   EHREAIDRCFSGDTVEEILAALEADG----SEWAAKTLKTLRSGSPLSLKVTLEQLRRGR 58

Query: 273 FQTFDECLVREYRMSLQGVSRLISGDFYE 301
             +  ECL  EYR++++ ++    GDF E
Sbjct: 59  GLSLAECLRMEYRLAVRCMAH---GDFAE 84

This is the C-terminal region of enoyl-CoA hydratase. Length = 117

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP A+NAL+  +  +L +  +  E DP++  + + G   AF AG DI  +        
Sbjct: 13  LDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAA----EP 68

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L +   F          L    KP +A +NG  +GGG  +++   +R+A     F  PE 
Sbjct: 69  LAQQAQFSLEAQDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEV 128

Query: 124 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGL 165
            +G  P AG +  L  + G      + LTG ++   E +  GL
Sbjct: 129 KLGIIPGAGGTQRLPRIIGVSAALEMLLTGRRIRAQEALKMGL 171

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score = 88.8 bits (221), Expect = 1e-20
 Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 8/167 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP   NAL   M   L    +A   DP +  V + G+GRAF AGGDI     F     
Sbjct: 20  INRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKD---FPKAPP 76

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             +  D    +  F+  +    KP VA +NG  +G G  +++      A     F+ P  
Sbjct: 77  --KPPDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFA 134

Query: 124 LIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATH 168
            +G  PDAG S  L  L G     E + L G  L+  E +  GL   
Sbjct: 135 KLGLCPDAGGSALLPRLIGRARAAE-MLLLGEPLSAEEALRIGLVNR 180

Length = 259

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score = 79.7 bits (197), Expect = 3e-17
 Identities = 61/208 (29%), Positives = 85/208 (40%), Gaps = 48/208 (23%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NALN  +  +L + F     DP+I  + + G  + F AG DI     F   G 
Sbjct: 23  LNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKE---FATAGA 79

Query: 64  LEECKDFFRTLYSFIYLLGTHL---------KPHVAILNGVTMGGGAGVSIPGTFRVACG 114
           +E            +YL  T           KP +A +NG  +GGG  +++     VA  
Sbjct: 80  IE------------MYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGE 127

Query: 115 KTVFATPETLIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATHYS 170
              F  PE  +G  P AG +     L   +G+F    +ALTG  +   E +A GL     
Sbjct: 128 SASFGQPEIKVGLMPGAGGT---QRLVRAVGKFKAMRMALTGCMVPAPEALAIGL----- 179

Query: 171 VSEKLPLIEEELGKLVTDDPSVIEACLE 198
           VSE            V +D   +   LE
Sbjct: 180 VSE------------VVEDEQTLPRALE 195

Length = 261

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score = 78.3 bits (193), Expect = 7e-17
 Identities = 60/201 (29%), Positives = 85/201 (42%), Gaps = 11/201 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP  LNALN  +  +L     A E D ++  V + G+G RAF AG DI      +  G
Sbjct: 18  LNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAG 77

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                +DF R   +    L    KP +A +NG+  GGG  ++      +A  + +FA PE
Sbjct: 78  ADVALRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPE 137

Query: 123 TLIGFHPDAGASFYLSHLPGHLG-----EFLALTGAKLNGAEMMACGLATH-YSVSEKLP 176
             +G  P  G +     LP   G     E L LTG   +    +  GL        E LP
Sbjct: 138 IRLGMPPTFGGT---QRLPRLAGRKRALELL-LTGDAFSAERALEIGLVNAVVPHEELLP 193

Query: 177 LIEEELGKLVTDDPSVIEACL 197
                  +++   P  + A L
Sbjct: 194 AARALARRIIRHSPVAVAAIL 214

Length = 260

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 77.9 bits (192), Expect = 9e-17
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 7/162 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           ++RP  LNALN  M  +     K    DP I  V + G GRAFC G D+           
Sbjct: 15  MSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEF-----APD 69

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                D   T Y  I  +    K +++ +NGVT G   G+++   F+ A     F T   
Sbjct: 70  FAI--DLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQ 127

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 165
            +G   D G +++L  L G     + + G +    E    GL
Sbjct: 128 RLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEAERWGL 169

Length = 248

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score = 76.7 bits (189), Expect = 3e-16
 Identities = 68/209 (32%), Positives = 96/209 (45%), Gaps = 27/209 (12%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 61
            +NRP ALNALN+    +L+ +    END N+  V + G+G +AF AG DI      M  
Sbjct: 18  TINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISE----MKD 73

Query: 62  GKLEECKDF-------FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG 114
              EE + F       FR L      L    KP +A +NG  +GGG  +S+    R+A  
Sbjct: 74  LNEEEGRKFGLLGNKVFRKL----ENLD---KPVIAAINGFALGGGCELSMACDIRIASE 126

Query: 115 KTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVS 172
           K  F  PE  +G  P  G +  L+ +  PG   E L  TG  +N  E +  GL     V 
Sbjct: 127 KAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKE-LIYTGDMINAEEALRIGLVN--KVV 183

Query: 173 EKLPLIEEELG---KLVTDDPSVIEACLE 198
           E   L+EE      K+  + P  ++ C +
Sbjct: 184 EPEKLMEEAKALANKIAANAPIAVKLCKD 212

Length = 260

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 4/196 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA N  + A+L   F+A + D ++  V + G+G+AFCAG D+  +   M    
Sbjct: 19  LNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKK-MAGYS 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +E +   R L   +  +    KP +A ++G    GG G+       VA    VF   E 
Sbjct: 78  DDENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEV 137

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVS-EKL-PLIEEE 181
            +G  P   + + +  +         LT  + + AE +  GL  H  V  E L   ++E 
Sbjct: 138 RLGLIPATISPYVIRAMGERAARRYFLTAERFDAAEALRLGLV-HEVVPAEALDAKVDEL 196

Query: 182 LGKLVTDDPSVIEACL 197
           L  LV + P  + A  
Sbjct: 197 LAALVANSPQAVRAGK 212

Length = 262

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score = 73.2 bits (180), Expect = 5e-15
 Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 25/189 (13%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI--VSLYHFMNQ 61
           LNRP ALNALN  +  +L     A++ D  IG + + GS +AF AG DI  ++   FM+ 
Sbjct: 19  LNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDV 78

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
            K     D+          +    KP +A + G  +GGG  +++     +A     F  P
Sbjct: 79  YK----GDYITNWEK----VARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQP 130

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATHYSVSEKLP- 176
           E  +G  P  G S     L   +G+     L LTG  ++ AE    GL     VS  +P 
Sbjct: 131 EIKLGVLPGMGGS---QRLTRAVGKAKAMDLCLTGRMMDAAEAERAGL-----VSRVVPA 182

Query: 177 --LIEEELG 183
             L++E L 
Sbjct: 183 DKLLDEALA 191

Length = 257

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP A NAL+  +  +L  +      + N+  V + G+G +AFCAG D+      MN+ 
Sbjct: 19  LNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAG-MNE- 76

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E+ +     + + + ++    +P +A +NG+ +GGG  +++   FR+A         E
Sbjct: 77  --EQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTE 134

Query: 123 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           T +   P AG +  L  L   G   E L  TG +++  E    GL      +  L     
Sbjct: 135 TTLAIIPGAGGTQRLPRLIGVGRAKE-LIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAI 193

Query: 181 ELGKLVTDD 189
           E+ + +  +
Sbjct: 194 EIAEKIASN 202

Length = 260

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 69.8 bits (171), Expect = 7e-14
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +N P   NA+   M A+L     A E DP++  + + G+G+AFCAG D+ +L      G+
Sbjct: 18  VNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTAL--GAAPGR 75

Query: 64  LEECKDFFRTLY-SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E  D  R +Y  F+ +    L P +A +NG  +G G  +++    R+A  K +F    
Sbjct: 76  PAE--DGLRRIYDGFLAVASCPL-PTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARF 132

Query: 123 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLAT 167
             +G HP  GA++ L    G  +     L G + +    +  GLA 
Sbjct: 133 QKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLAL 178

Length = 249

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 61
            LNRP  +NAL+ +   +L ++F  +  DP      + G+G +AF AG D   L      
Sbjct: 18  TLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGND---LKEQAAG 74

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           GK    +  F  L S   L     KP +A +NGV MGGG  +++     VA     FA P
Sbjct: 75  GKRGWPESGFGGLTSRFDL----DKPIIAAVNGVAMGGGFELALACDLIVAAENATFALP 130

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 165
           E  +G    AG       LP  +G   A    LTG ++   E +  G 
Sbjct: 131 EPRVGLAALAGGLH---RLPRQIGLKRAMGMILTGRRVTAREGLELGF 175

Length = 259

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 51/176 (28%), Positives = 69/176 (39%), Gaps = 21/176 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL-------- 55
           LNRP  LNA    M A++       E DP +  + + G+GR FCAG D+  L        
Sbjct: 21  LNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDG 80

Query: 56  --YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC 113
                +         D ++T Y F+  L    KP +A +NG   G G   ++    R A 
Sbjct: 81  RRDTDVRPFVGNRRPD-YQTRYHFLTALR---KPVIAAINGACAGIGLTHALMCDVRFAA 136

Query: 114 GKTVFATPET---LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 165
               F T      LI  H   G S+ L  L GH     L L+       E +  GL
Sbjct: 137 DGAKFTTAFARRGLIAEH---GISWILPRLVGHANALDLLLSARTFYAEEALRLGL 189

Length = 272

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 67.2 bits (164), Expect = 6e-13
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LN+    M  +L +  +  E D +   + + G+GR FCAG D+         G 
Sbjct: 14  LNRPDKLNSFTAEMHLELREALERVERD-DARALMLTGAGRGFCAGQDLSERN--PTPGG 70

Query: 64  LEECKDFFRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             +      T Y+  +  L     P V  +NGV  G GA +++     +A     F    
Sbjct: 71  APDLGRTIETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAF 130

Query: 123 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGL 165
             IG  PD+G ++ L  L G      LA+ G KL+     + GL
Sbjct: 131 AKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGL 174

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 66.9 bits (164), Expect = 6e-13
 Identities = 51/206 (24%), Positives = 79/206 (38%), Gaps = 16/206 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL----YHFM 59
           LNRP A NAL+  +   L       + D ++  V + G+  AFCAG D+  L      + 
Sbjct: 19  LNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYG 78

Query: 60  NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
            Q  L                     KP +  +NG  + GG  +++     +A  +  FA
Sbjct: 79  AQDALPNP----------SPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFA 128

Query: 120 TPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPL 177
                +G  P  G S  L    G      ++LTG  L+ A+ +  GL T      E LP 
Sbjct: 129 DTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVPHDELLPR 188

Query: 178 IEEELGKLVTDDPSVIEACLEKYSDL 203
                  +  ++P+ + A    Y D 
Sbjct: 189 ARRLAASIAGNNPAAVRALKASYDDG 214

Length = 258

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 67.2 bits (164), Expect = 7e-13
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 14/176 (7%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
            LNRPS  NAL+ +   +  K   + + +PN+  + + G+G  FC+G D+ +L     Q 
Sbjct: 22  NLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQS 81

Query: 63  KL-------EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 115
                    E  +   + L   I  +    KP +A ++G  +GGG  +      R     
Sbjct: 82  SSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSED 141

Query: 116 TVFATPETLIGFHPDAGASFYLSHLPGHLG----EFLALTGAKLNGAEMMACGLAT 167
             F+  E  +    D G    L  LP  +G      LALTG + +G+E    GL +
Sbjct: 142 AFFSVKEVDLAITADLGT---LQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVS 194

Length = 275

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 7/170 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQG 62
           L+RP A NA+   M   L   F+  + D +   V ++ S    FCAG D+      M+  
Sbjct: 10  LDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADL-KERRKMS-- 66

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
              E + F  +L S    L     P +A++ G  +GGG  +++    R+   + VF  PE
Sbjct: 67  -PSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPE 125

Query: 123 TLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSV 171
           T +   P AG +  L  L G    + L  TG ++   E  + GL  +Y V
Sbjct: 126 TGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLV-NYCV 174

Length = 251

>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 11/215 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            NRP   NA+   M A + K  KA + D  I      G+   F AG D+         G 
Sbjct: 21  FNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGT 80

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                 F   +  F+  L    KP V+ ++G+ +G G  + +      A  +++F TP  
Sbjct: 81  -----SFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFV 135

Query: 124 LIGFHPDAGASFYLSHLPGHLGEF--LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
            +   P+AG+S     L GH   F  LAL G   +       GL   + + ++   +E E
Sbjct: 136 DLALVPEAGSSLLAPRLMGHQRAFALLAL-GEGFSAEAAQEAGLI--WKIVDE-EAVEAE 191

Query: 182 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 216
             K   +  +     L+   DL+   +  ++ RID
Sbjct: 192 TLKAAEELAAKPPQALQIARDLMRGPREDILARID 226

Length = 251

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 4/164 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ P A NAL+ +M A   +     E DP+I  V + G+G  FCAGG++  L    N+ K
Sbjct: 18  LSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLE--NRAK 75

Query: 64  -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                      L+ +I  +    KP +A + G   G G  +++     VA     F    
Sbjct: 76  PPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAY 135

Query: 123 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGL 165
             +G  PD G S++L+  LP  L   L L G  ++   + A G+
Sbjct: 136 VKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGV 179

Length = 260

>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 5/165 (3%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           +LNRP ALNAL+  M  +L +  K    + +   V ++G+GR F AGGDI  +   ++  
Sbjct: 20  MLNRPEALNALDEPMLKELLQALKEVA-ESSAHIVVLRGNGRGFSAGGDIKMM---LSSN 75

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
              +      T+   +  L T  K  ++ ++G   G G  +++   + +A      A   
Sbjct: 76  DESKFDGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNF 135

Query: 123 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLA 166
             IG  PD G  F+L    G +  + +   G KL+  E +  GL 
Sbjct: 136 IGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLI 180

Length = 260

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 10/233 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 61
             N P+  NA++ +M   L +   A E+D  I  V + G+G +AF +G DI     F   
Sbjct: 25  TFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADIS---QFEES 81

Query: 62  GKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
               E    +          L  + KP +A + G  +GGG G+++    R+A   + F  
Sbjct: 82  RSDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGI 141

Query: 121 PETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL-PL 177
           P   +G          L  L  P    +    T  + + AE +  GL    + ++ L   
Sbjct: 142 PAARLGLGYGYDGVKNLVDLVGPSAAKDLF-YTARRFDAAEALRIGLVHRVTAADDLETA 200

Query: 178 IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID-IVDKCFGLDTVEE 229
           + +    +  + P  + A     ++L+  +    +     +V  CF  +   E
Sbjct: 201 LADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFDSEDYRE 253

Length = 269

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 52/190 (27%), Positives = 70/190 (36%), Gaps = 38/190 (20%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  +NAL+  M  +L    K  + D  I  V + G G AFCAG D+ S     +   
Sbjct: 18  LNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKS---VASSPG 74

Query: 64  LEECKDFFRTLYSFIYLLGTHLK------------------PHVAILNGVTMGGGAGVSI 105
                         + LL   L                   P +A L GV  GGG  +++
Sbjct: 75  NA------------VKLLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIAL 122

Query: 106 PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMAC 163
               R+A   T  +  E   G  PD   +  L  L       E L  T    +  E +  
Sbjct: 123 GADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARE-LTYTARVFSAEEALEL 181

Query: 164 GLATHYSVSE 173
           GL TH  VS+
Sbjct: 182 GLVTH--VSD 189

Length = 262

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 7/171 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NALN  +  +L    +A   D +IG   + G+ R F AG D+      M +  
Sbjct: 17  LNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNE----MAEKD 72

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L    +  R        L    KP +A +NG  +G G  +++     +A     F  PE 
Sbjct: 73  LAATLNDPRPQL--WQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEI 130

Query: 124 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSE 173
            +G  P AG +  L    G  L   + LTG  +   +    GL +     E
Sbjct: 131 TLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPE 181

Length = 255

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 31/161 (19%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS--------- 54
           LNRP  LNA    M  +L + F A + D  +  V + G+GRAFCAG D+ +         
Sbjct: 19  LNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDA 78

Query: 55  ---LYHFMNQGKLEECKDFFR------TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSI 105
                    + + +   D  R      TL  F       LKP +A +NG  +G GA +++
Sbjct: 79  PRTPVEADEEDRADPSDDGVRDGGGRVTLRIF-----DSLKPVIAAVNGPAVGVGATMTL 133

Query: 106 PGTFRVACGKT----VFATPETLIGFHPDAGASFYLSHLPG 142
               R+A        VF       G  P+A +S++L  L G
Sbjct: 134 AMDIRLASTAARFGFVFGR----RGIVPEAASSWFLPRLVG 170

Length = 296

>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ-- 61
           LNRP   NA+N    ++L ++F+  + DP +  V + GSG+ F  G D+ ++     Q  
Sbjct: 21  LNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLG 80

Query: 62  -----GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
                    + +     L + I  +    KP +A + G  +GGG  +      R A    
Sbjct: 81  KDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADA 140

Query: 117 VFATPETLIGFHPDAGASFYLSHLP-----GHLGEFLALTGAKLNGAEMMACGL 165
            F+  E  +G   D G+   L  LP     GHL E LALTG  ++ AE    GL
Sbjct: 141 KFSVREVDLGMVADVGS---LQRLPRIIGDGHLRE-LALTGRDIDAAEAEKIGL 190

Length = 272

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 58.0 bits (141), Expect = 8e-10
 Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 14/169 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LN+    M  +L +     E D     + + G+GR FCAG D+       +   
Sbjct: 19  LNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADR----DVTP 73

Query: 64  LEECKDFFRTLYSF----IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
                D   ++ +F    +  L     P +A +NGV  G GA +++     +A     F 
Sbjct: 74  GGAMPDLGESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFI 133

Query: 120 TPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGL 165
                IG  PD+G +++L  L G    LG  LAL G KL+  +    GL
Sbjct: 134 QAFVKIGLVPDSGGTWFLPRLVGMARALG--LALLGEKLSAEQAEQWGL 180

Length = 262

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 26/206 (12%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL------ 55
            L+RP A NA++      + ++F  + +DP +    + G+G + F AG D+ +       
Sbjct: 17  TLDRPKA-NAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAP 75

Query: 56  ---YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA 112
              +       L E  D                KP +A +NG   GGG  +++   F V 
Sbjct: 76  DADFGPGGFAGLTEIFDLD--------------KPVIAAVNGYAFGGGFELALAADFIVC 121

Query: 113 CGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATHYSV 171
                FA PE  +G  PD+G    L   LP  +   + +TG +++  E +  G+      
Sbjct: 122 ADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVP 181

Query: 172 SEKLPLIEEELGKLVTDDPSVIEACL 197
             +L     EL + + +   +  A L
Sbjct: 182 QAELMDRARELAQQLVNSAPLAIAAL 207

Length = 261

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI 52
          +NRP ALNAL   M  +L   FK  + D ++  + + GSGRAFC+G D+
Sbjct: 25 INRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDL 73

Length = 265

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 54/172 (31%), Positives = 75/172 (43%), Gaps = 14/172 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAW---ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +NRP A NAL+T M   L  +  AW   +NDP+I    + G+G AFCAG D+ +      
Sbjct: 20  MNRPEARNALSTEM---LRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAA---TK 73

Query: 61  QGKLEECKDFFRTLYSFIYLLGTH--LKPHVAILNGVTMGGGAGVSIPGT-FRVACGKTV 117
           +   +  KD          LL      KP +A + G  + GG  + + GT  RVA     
Sbjct: 74  KPPGDSFKDGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEI-LQGTDIRVAGESAK 132

Query: 118 FATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATH 168
           F   E      P  G++  L   +P  +   L LTG  +  AE    GL  H
Sbjct: 133 FGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGH 184

Length = 263

>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 8/158 (5%)

Query: 4   LNRPSA-LNALNTNMGAKLNKLFKAWENDPNI-GFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           ++ P++ +N L+  + A+  ++      +  I   V + G   +F AG DI  +      
Sbjct: 28  IDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMI---AAC 84

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG--KTVFA 119
              +E     +        +    KP VA ++G  +GGG  +++   +R+A    KT+  
Sbjct: 85  KTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLG 144

Query: 120 TPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLN 156
            PE ++G  P AG +  L  L G      + LTG K+ 
Sbjct: 145 LPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIR 182

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737

>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   N  N  M  ++ +  +  E DP++ F+ +  +G+ F  GGD+V +   +++  
Sbjct: 17  LNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDD 76

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           ++        +    + +    KP +  ++G   G  A +++   F +A  KT F     
Sbjct: 77  VQSLVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFV 136

Query: 124 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            +G  PDAG  F L+   G +    LA+TG  L   + +  G     + SEKL    E+L
Sbjct: 137 GVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVYRVAESEKLEKTCEQL 196

Query: 183 GK 184
            K
Sbjct: 197 LK 198

Length = 255

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 32/210 (15%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN P A NAL++ +  +L++L    E D N+  V + G GR F AG DI     F +  +
Sbjct: 17  LNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADI---KEFTSVTE 72

Query: 64  LEECKDFFRTLYSFIYLLGTHL--------KPHVAILNGVTMGGGAGVSIPGTFRVACGK 115
            E+         + +  LG           KP +A ++G  +GGG  +++    R A   
Sbjct: 73  AEQ--------ATELAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATES 124

Query: 116 TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATHYSV 171
                PE  +G  P    +     LP ++G+  A    LT   + GAE +  GL      
Sbjct: 125 AKLGLPELNLGLIPGFAGT---QRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNG-VF 180

Query: 172 SEKLPLIEEEL---GKLVTDDPSVIEACLE 198
            E+  L+++      K+    P+   A LE
Sbjct: 181 PEE-TLLDDAKKLAKKIAGKSPATTRAVLE 209

Length = 257

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 16/201 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ-- 61
           L+R    NA N  M  +L       ++D ++ F+ ++G GR F AG D+     +M Q  
Sbjct: 21  LSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLA----WMQQSA 76

Query: 62  -----GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
                  L++     R L   +Y L     P +A++ G   GG  G+       +     
Sbjct: 77  DLDYNTNLDDA----RELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDA 132

Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL-ATHYSVSEKL 175
            F   E  IG  P   + F +  +        ALT  + +G      GL A  Y  +E  
Sbjct: 133 QFCLSEVRIGLAPAVISPFVVKAIGERAARRYALTAERFDGRRARELGLLAESYPAAELE 192

Query: 176 PLIEEELGKLVTDDPSVIEAC 196
             +E  +  L+ + P  + A 
Sbjct: 193 AQVEAWIANLLLNSPQALRAS 213

Length = 265

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 24/177 (13%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 61
             NRP+A NA+   M   L ++ +A   DP+I  V ++G+G +AF AG DI     F   
Sbjct: 22  TFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAF--- 78

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
              E+   + R +   +  L     P +A + G  +GGGA ++     R+       ATP
Sbjct: 79  STAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRI-------ATP 131

Query: 122 ETLIGFHPDA-------GASFYLSHLPGHLG----EFLALTGAKLNGAEMMACGLAT 167
               GF P A         S   + L   LG    + +  T   L   E +A GL  
Sbjct: 132 SARFGF-PIARTLGNCLSMSNL-ARLVALLGAARVKDMLFTARLLEAEEALAAGLVN 186

Length = 262

>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated

 Score = 55.4 bits (134), Expect = 6e-09
 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA++  +  ++  +  A E D + G + + G+G A+ AG D+   +   +   
Sbjct: 23  LNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQP 82

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
               +   R  Y +   L  + KP +A++NG   GGG    +     +A  +  F   E 
Sbjct: 83  EILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEI 142

Query: 124 LIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIE--- 179
             G  P  G S  ++   GH    +  +TG    G +    GL     V+E +PL +   
Sbjct: 143 NWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGL-----VNESVPLAQLRA 197

Query: 180 ---EELGKLVTDDPSVIEA 195
              E   KL+  +P V+ A
Sbjct: 198 RTRELAAKLLEKNPVVLRA 216

Length = 275

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 11/165 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ P  +NAL+  +  +L  +F      P++  V + G+G+ FCAG D+           
Sbjct: 19  LDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKG-----RPDV 72

Query: 64  LEECKDFF---RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           ++   D     R      + +    KP +A +NG  +G G G+       VA    VF  
Sbjct: 73  IKGPGDLRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGL 132

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 165
           PE  +G     G    +      L   + LTG ++  AE+   G+
Sbjct: 133 PEIDVGLA--GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGV 175

Length = 257

>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional

 Score = 52.6 bits (126), Expect = 7e-08
 Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 34/205 (16%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH-----F 58
           LNRP  LN +   M  ++       E D +I  + ++G+GRAF  G D    +       
Sbjct: 20  LNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAM 79

Query: 59  MNQGKLEECKDFFRT-------LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRV 111
           M  G+ +  KDF             F+ +     KP +A ++G  +GG +  ++      
Sbjct: 80  MTDGRWDPGKDFAMVTARETGPTQKFMAIWRAS-KPVIAQVHGWCVGGASDYAL------ 132

Query: 112 ACGKTVFATPETLIGFHPDA---GA---SFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 165
            C   V A+ + +IG  P +   GA     +L  L     ++ +LTG  L G +     L
Sbjct: 133 -CADIVIASDDAVIG-TPYSRMWGAYLTGMWLYRLSLAKVKWHSLTGRPLTGVQAAEAEL 190

Query: 166 ATHYSVSEKLPL--IEEELGKLVTD 188
                ++E +P   +E  + ++ T+
Sbjct: 191 -----INEAVPFERLEARVAEVATE 210

Length = 298

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 20/183 (10%)

Query: 4   LNRPSALNALNTN-MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLY--HFMN 60
           +NRP   NAL+ N     L     A   D ++  V + G+G AF +GG++  +       
Sbjct: 18  MNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAF 77

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLK-PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
            G   + +  +R     I L   +L+ P +A +NG  +G G  ++     R+A     FA
Sbjct: 78  GGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFA 137

Query: 120 TPETLIGFHP-DAGASFYLSHLPGHLG-----EFLALTGAKLNGAEMMACGLATHYSVSE 173
                +G  P D GA      LP  +G     E +A TG  ++ A  +  GL     VS 
Sbjct: 138 ESFVKLGLIPGDGGAWL----LPRIIGMARAAE-MAFTGDAIDAATALEWGL-----VSR 187

Query: 174 KLP 176
            +P
Sbjct: 188 VVP 190

Length = 266

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 51/174 (29%), Positives = 70/174 (40%), Gaps = 18/174 (10%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP+  NALN  + A L   F        +  V + G G  FCAG D+  L        
Sbjct: 17  LNRPAKRNALNDGLIAALRAAFARLPEG--VRAVVLHGEGDHFCAGLDLSELRERDAGEG 74

Query: 64  LEECKDFFRTL----YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
           +   + + R      Y  +        P +A L+G  +GGG  ++     RVA   T FA
Sbjct: 75  MHHSRRWHRVFDKIQYGRV--------PVIAALHGAVVGGGLELASAAHIRVADESTYFA 126

Query: 120 TPETLIGFHPDAGASFYLSHLPG--HLGEFLALTGAKLNGAEMMACGLATHYSV 171
            PE   G     G S  +  L G   + + + LTG   +  E    GLA  Y V
Sbjct: 127 LPEGQRGIFVGGGGSVRVPRLIGVARMTD-MMLTGRVYDAQEGERLGLA-QYLV 178

Length = 255

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--- 60
           LNRP   NAL+  M A+L    +    D  +  V + G+G++FCAGGD+  +   M    
Sbjct: 20  LNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADR 79

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG 102
             ++EE     R L   +  L    KP +  + G   GGG G
Sbjct: 80  ATRIEEA----RRLAMMLKALNDLPKPLIGRIQGQAFGGGVG 117

Length = 262

>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGD 51
          LNRP A NAL+  M A L     A   DP++  V +  +G+AFCAG D
Sbjct: 26 LNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHD 73

Length = 266

>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 4/165 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   N L     A+L  LF+      ++  V + G+G  FC+GGD+  +   + +  
Sbjct: 32  LNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMD 91

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           + E   F R     +  +    +P +A ++GV  G GA +++    R+       A   T
Sbjct: 92  MPELLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFT 151

Query: 124 LIGFH-PDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 165
            +G    D GA   L  +   G   E L  TG  ++  E    G 
Sbjct: 152 RVGLAGADMGACALLPRIIGQGRASELL-YTGRSMSAEEGERWGF 195

Length = 277

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 20/174 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPN-IGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           L+ P  +NA++ +M   L +   A E+    +  + + G+GR FC G ++        QG
Sbjct: 19  LDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANL--------QG 70

Query: 63  KLEECKDF---------FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA 112
           +    ++            T Y  F+  L     P V  +NG   G G   ++ G   + 
Sbjct: 71  RGSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILC 130

Query: 113 CGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 165
                F      IG  PD G+++ L  L G      L+L G KL     +  GL
Sbjct: 131 ARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGL 184

Length = 266

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGD--IVSLYHFM 59
            +NRP   NA       ++ +       DP+IG V + G+G +AFC+GGD  +   Y ++
Sbjct: 17  TINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYI 76

Query: 60  NQGKLEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGG 100
           +   +      D  R + +         KP +A++NG  +GGG
Sbjct: 77  DDSGVHRLNVLDVQRQIRTCP-------KPVIAMVNGYAIGGG 112

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL--YHFM 59
           IL+ P   N+  T+M   +   F+   +D ++  V     G +AFC GG+      Y+  
Sbjct: 42  ILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAG 101

Query: 60  NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
           N  +  +    F  + S I  LG   KP +  +NG+ +GGG  + +   F +A     F 
Sbjct: 102 NPQEYRQYMRLFNDMVSAI--LGCD-KPVICRVNGMRIGGGQEIGMAADFTIAQDLANFG 158

Query: 120 TPETLIGFHPDAGASFYL 137
                 G  P  GA+ +L
Sbjct: 159 QAGPKHGSAPIGGATDFL 176

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 7/160 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI---VSLYHFM 59
             + P ++N  +    A L++   A +   ++  V +     AF  G DI   + L+  +
Sbjct: 21  KFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLF-AL 79

Query: 60  NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
              +L +   F  ++++ +  L     P VA +NG+ +GGG    +   FR+A       
Sbjct: 80  PDAELIQWLLFANSIFNKLEDLPV---PTVAAINGIALGGGCECVLATDFRIADDTAKIG 136

Query: 120 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE 159
            PET +G  P  G +  L  + G       +   K N AE
Sbjct: 137 LPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAE 176

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 59/212 (27%), Positives = 79/212 (37%), Gaps = 37/212 (17%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
            ++ P  +NAL +     L     A   DP+   V ++  GR F AG DI  L       
Sbjct: 16  TVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFT 74

Query: 63  KL----EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
            L      C   FR +Y           P +A ++G  +GGG G+       VA     F
Sbjct: 75  ALIDANRGCFAAFRAVYE-------CAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATF 127

Query: 119 ATPETLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 174
             PE       D GA    +HL    P HL   L  T A +  AE+   G     SV E 
Sbjct: 128 GLPEV------DRGALGAATHLQRLVPQHLMRALFFTAATITAAELHHFG-----SVEEV 176

Query: 175 LPLIEEEL--------GKLVTDDPSVIEACLE 198
           +P   ++L         K+   D  VI A  E
Sbjct: 177 VP--RDQLDEAALEVARKIAAKDTRVIRAAKE 206

Length = 249

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 45/197 (22%), Positives = 71/197 (36%), Gaps = 47/197 (23%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
            LNRP   NA+  +   +L    +  + DP +  + + G+G+ FCAG D+ +     + G
Sbjct: 24  TLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSG 83

Query: 63  KLEECKDFFRTLYS----------------------FIYLLGTHLKPHVAILNGVTMGGG 100
                    R   +                      F+ L   H KP VA ++G  + GG
Sbjct: 84  GGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAH-KPTVAKVHGYCVAGG 142

Query: 101 AGVSIPGTFRVACGKTVFATPETLIGFH-------PDAGASFYLSHLPGHLG----EFLA 149
             +++           V A  +  IG+        P  G   Y       LG    + L 
Sbjct: 143 TDIAL-------HCDQVIAADDAKIGYPPTRVWGVPATGMWAY------RLGPQRAKRLL 189

Query: 150 LTGAKLNGAEMMACGLA 166
            TG  + GA+    GLA
Sbjct: 190 FTGDCITGAQAAEWGLA 206

Length = 302

>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 48/167 (28%), Positives = 65/167 (38%), Gaps = 7/167 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ P   NAL+  + A+L+   +A   DP +  V +  +G  FCAG D   L      G 
Sbjct: 21  LDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGAD---LSEAGGGGG 77

Query: 64  LEECKDFFRTLYSFIYLLGTHL---KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
                   R       LL   +   KP +A ++G    GG G+       VA  ++ FA 
Sbjct: 78  DPYDAAVARAR-EMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFAL 136

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 167
            E  IG  P   +   L  L         LTG K   AE    GL T
Sbjct: 137 TEARIGVAPAIISLTLLPRLSPRAAARYYLTGEKFGAAEAARIGLVT 183

Length = 260

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 9/164 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP A NA+N  +   L       + DP++    + G+G  FCAG D   L  F  +G+
Sbjct: 18  INRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMD---LKAFA-RGE 73

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                   R             KP +A + G  + GG  +++     VA     F  PE 
Sbjct: 74  RPSIPG--RGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEV 129

Query: 124 LIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLA 166
             G     G    L   +P H+   LALTG  L        GL 
Sbjct: 130 KRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLV 173

Length = 254

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 3  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGD 51
          +LN P ALNA +  M  +L  +++  + DP++  V ++G G+AF AGGD
Sbjct: 26 VLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGD 74

Length = 268

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 45/188 (23%), Positives = 67/188 (35%), Gaps = 29/188 (15%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS------LYH 57
           LNRP A NA N  M  +L+  F+  E D  +  + + G+G+ F AG D+ S         
Sbjct: 19  LNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDP 78

Query: 58  FMNQGKLEECKDFFRTLYSFIYLLGTHL------------KPHVAILNGVTMGGGAGVSI 105
             +Q          +      Y     +            KP +A + G  + GG  ++ 
Sbjct: 79  GPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAW 138

Query: 106 PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG-----EFLALTGAKLNGAEM 160
                VA     F+ P   +G         Y +H P  LG     E L  TG +L   E 
Sbjct: 139 VCDLIVASDDAFFSDPVVRMG----IPGVEYFAH-PWELGPRKAKELL-FTGDRLTADEA 192

Query: 161 MACGLATH 168
              G+   
Sbjct: 193 HRLGMVNR 200

Length = 288

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 3/118 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  +N++  ++   L +       D ++  V + G+GR F +G D  S     +   
Sbjct: 25  LNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEG 84

Query: 64  LEECKDFFRT---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
           L       R+   L   I  L    +P +A +NG  +GGG  +++    RVA     F
Sbjct: 85  LTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYF 142

Length = 276

>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 26/49 (53%)

Query: 3  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGD 51
          ILNRP   NA++    A L   F+A++ D       + G+G  FCAG D
Sbjct: 17 ILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGAD 65

Length = 254

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 18/123 (14%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 61
           ++NRP+ +NA       +L    K    D  IG + + G+G +AFC GGD  S +     
Sbjct: 16  MINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGD-QSTHDGGYD 74

Query: 62  GK------LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 115
           G+      +EE     R +           KP +A + G  +GGG  +       +A  K
Sbjct: 75  GRGTIGLPMEELHSAIRDV----------PKPVIARVQGYAIGGGNVLVTICDLTIASEK 124

Query: 116 TVF 118
             F
Sbjct: 125 AQF 127

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGD 51
           +NRP   NA       +L + F    +D ++G + + G G +AFC+GGD
Sbjct: 82  INRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGD 130

Length = 327

>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 8/164 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP A N ++  M A L+        D  +  V +   G  F  G  +        +  
Sbjct: 16  LARPKA-NIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASV-------AEHM 67

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            ++C     +L+  +  +     P +  + G  +GGG  V+  G    A        PE 
Sbjct: 68  PDQCAAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEI 127

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 167
           ++G    A +      +     E L  +G  ++GAE    GLA 
Sbjct: 128 VLGVFAPAASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLAN 171

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251

>gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 7/160 (4%)

Query: 10  LNALNTNMGAKLNKLFKAWENDPNI-GFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 68
           +N L      +++++    + D +I G V + G    F AG DI  L      G+ +   
Sbjct: 23  MNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQTAGEAKALA 82

Query: 69  DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVFATPETLIG 126
              + L++ +  L   +   VA ++G  +GGG  +++    RV     KTV   PE  +G
Sbjct: 83  QQGQVLFAELEALPIPV---VAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLG 139

Query: 127 FHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 165
             P +G +  L  L G      + LTG +L   + +  GL
Sbjct: 140 LLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGL 179

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog model [Fatty acid and phospholipid metabolism, Degradation]. Length = 699

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	100.0
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
KOG1684	401	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	100.0
PRK05980	260	enoyl-CoA hydratase; Provisional	100.0
PLN02600	251	enoyl-CoA hydratase	100.0
PRK06143	256	enoyl-CoA hydratase; Provisional	100.0
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	100.0
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	100.0
KOG1680	290	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
PRK06142	272	enoyl-CoA hydratase; Provisional	100.0
PRK05862	257	enoyl-CoA hydratase; Provisional	100.0
PRK09076	258	enoyl-CoA hydratase; Provisional	100.0
PRK07260	255	enoyl-CoA hydratase; Provisional	100.0
PRK08150	255	enoyl-CoA hydratase; Provisional	100.0
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	100.0
PRK06563	255	enoyl-CoA hydratase; Provisional	100.0
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	100.0
PRK07657	260	enoyl-CoA hydratase; Provisional	100.0
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	100.0
PRK07799	263	enoyl-CoA hydratase; Provisional	100.0
PRK08258	277	enoyl-CoA hydratase; Provisional	100.0
PRK08140	262	enoyl-CoA hydratase; Provisional	100.0
PRK08139	266	enoyl-CoA hydratase; Validated	100.0
PRK08138	261	enoyl-CoA hydratase; Provisional	100.0
PRK06127	269	enoyl-CoA hydratase; Provisional	100.0
PRK09245	266	enoyl-CoA hydratase; Provisional	100.0
PRK07658	257	enoyl-CoA hydratase; Provisional	100.0
PRK07511	260	enoyl-CoA hydratase; Provisional	100.0
PRK08252	254	enoyl-CoA hydratase; Provisional	100.0
PRK07468	262	enoyl-CoA hydratase; Provisional	100.0
PRK05995	262	enoyl-CoA hydratase; Provisional	100.0
PRK06023	251	enoyl-CoA hydratase; Provisional	100.0
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	100.0
PRK05981	266	enoyl-CoA hydratase; Provisional	100.0
PRK06494	259	enoyl-CoA hydratase; Provisional	100.0
PRK05870	249	enoyl-CoA hydratase; Provisional	100.0
PRK07659	260	enoyl-CoA hydratase; Provisional	100.0
PRK07938	249	enoyl-CoA hydratase; Provisional	100.0
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	100.0
PRK05864	276	enoyl-CoA hydratase; Provisional	100.0
PRK06210	272	enoyl-CoA hydratase; Provisional	100.0
PRK07327	268	enoyl-CoA hydratase; Provisional	100.0
PLN02888	265	enoyl-CoA hydratase	100.0
PRK06688	259	enoyl-CoA hydratase; Provisional	100.0
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	100.0
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	100.0
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	100.0
PRK06495	257	enoyl-CoA hydratase; Provisional	100.0
PRK08259	254	enoyl-CoA hydratase; Provisional	100.0
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	100.0
PRK06072	248	enoyl-CoA hydratase; Provisional	100.0
PRK06144	262	enoyl-CoA hydratase; Provisional	100.0
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	100.0
PRK07509	262	enoyl-CoA hydratase; Provisional	100.0
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	100.0
PRK08260	296	enoyl-CoA hydratase; Provisional	100.0
PRK07827	260	enoyl-CoA hydratase; Provisional	100.0
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	100.0
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	100.0
PRK07854	243	enoyl-CoA hydratase; Provisional	100.0
PLN02921	327	naphthoate synthase	100.0
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
PRK12478	298	enoyl-CoA hydratase; Provisional	100.0
PRK08321	302	naphthoate synthase; Validated	100.0
PRK06190	258	enoyl-CoA hydratase; Provisional	100.0
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	100.0
PRK05869	222	enoyl-CoA hydratase; Validated	100.0
PRK11730	715	fadB multifunctional fatty acid oxidation complex	100.0
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	100.0
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	100.0
PRK08290	288	enoyl-CoA hydratase; Provisional	100.0
KOG1679	291	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
PRK08788	287	enoyl-CoA hydratase; Validated	100.0
KOG1681	292	consensus Enoyl-CoA isomerase [Lipid transport and	100.0
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	100.0
PRK08272	302	enoyl-CoA hydratase; Provisional	100.0
PRK06213	229	enoyl-CoA hydratase; Provisional	100.0
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	100.0
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	100.0
KOG0016	266	consensus Enoyl-CoA hydratase/isomerase [Lipid tra	100.0
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	100.0
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	100.0
KOG1682	287	consensus Enoyl-CoA isomerase [Lipid transport and	100.0
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	100.0
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	100.0
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	100.0
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	100.0
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	99.84
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	99.82
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	99.66
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	99.61
PF13766	118	ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD	99.59
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	99.56
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	99.54
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	99.5
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	99.48
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	99.39
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	99.34
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	99.34
cd07015	172	Clp_protease_NfeD Nodulation formation efficiency	98.89
cd07013	162	S14_ClpP Caseinolytic protease (ClpP) is an ATP-de	98.87
KOG1683	380	consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA	98.77
PRK00277	200	clpP ATP-dependent Clp protease proteolytic subuni	98.76
PRK10949	618	protease 4; Provisional	98.67
PRK12553	207	ATP-dependent Clp protease proteolytic subunit; Re	98.64
cd07017	171	S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-	98.59
PRK14512	197	ATP-dependent Clp protease proteolytic subunit; Pr	98.53
PF00574	182	CLP_protease: Clp protease; InterPro: IPR001907 In	98.5
CHL00028	200	clpP ATP-dependent Clp protease proteolytic subuni	98.42
PRK12319	256	acetyl-CoA carboxylase subunit alpha; Provisional	98.42
TIGR00493	191	clpP ATP-dependent Clp protease, proteolytic subun	98.37
CHL00198	322	accA acetyl-CoA carboxylase carboxyltransferase al	98.36
COG0616	317	SppA Periplasmic serine proteases (ClpP class) [Po	98.35
PRK14514	221	ATP-dependent Clp protease proteolytic subunit; Pr	98.24
TIGR00513	316	accA acetyl-CoA carboxylase, carboxyl transferase,	98.23
PRK12551	196	ATP-dependent Clp protease proteolytic subunit; Re	98.23
PLN03229	762	acetyl-coenzyme A carboxylase carboxyl transferase	98.22
PLN03230	431	acetyl-coenzyme A carboxylase carboxyl transferase	98.21
PRK14513	201	ATP-dependent Clp protease proteolytic subunit; Pr	98.19
PRK05724	319	acetyl-CoA carboxylase carboxyltransferase subunit	98.16
TIGR03133	274	malonate_beta malonate decarboxylase, beta subunit	98.02
PRK11778	330	putative inner membrane peptidase; Provisional	98.0
PRK07189	301	malonate decarboxylase subunit beta; Reviewed	98.0
TIGR03134	238	malonate_gamma malonate decarboxylase, gamma subun	97.86
PF01972	285	SDH_sah: Serine dehydrogenase proteinase; InterPro	97.83
PRK05654	292	acetyl-CoA carboxylase subunit beta; Validated	97.75
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	97.74
PF01343	154	Peptidase_S49: Peptidase family S49 peptidase clas	97.74
TIGR00515	285	accD acetyl-CoA carboxylase, carboxyl transferase,	97.63
COG1030	436	NfeD Membrane-bound serine protease (ClpP class) [	97.58
COG0740	200	ClpP Protease subunit of ATP-dependent Clp proteas	97.55
CHL00174	296	accD acetyl-CoA carboxylase beta subunit; Reviewed	97.5
PRK12552	222	ATP-dependent Clp protease-like protein; Reviewed	97.4
PRK10949	618	protease 4; Provisional	97.27
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	97.24
COG0825	317	AccA Acetyl-CoA carboxylase alpha subunit [Lipid m	96.59
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	96.59
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	96.45
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	96.38
COG0777	294	AccD Acetyl-CoA carboxylase beta subunit [Lipid me	95.93
KOG0840	275	consensus ATP-dependent Clp protease, proteolytic	95.33
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	95.24
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	94.97
COG4799	526	Acetyl-CoA carboxylase, carboxyltransferase compon	94.45
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	91.3
COG4799	526	Acetyl-CoA carboxylase, carboxyltransferase compon	87.47
COG0074	293	SucD Succinyl-CoA synthetase, alpha subunit [Energ	81.28

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=4.9e-64  Score=464.22  Aligned_cols=312  Identities=69%  Similarity=1.145  Sum_probs=272.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..............++...+.+...
T Consensus        49 ~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~  128 (401)
T PLN02157         49 TAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYL  128 (401)
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999886432112222234455556667788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      |.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||+.++|+||
T Consensus       129 i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~L~LTG~~i~A~eA  208 (401)
T PLN02157        129 LGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEM  208 (401)
T ss_pred             HHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHHHHHcCCcCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999779999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||||++||++++....+.++++...+|.++...|+.+.....+...........+..||+.+++++++++|+....+
T Consensus       209 ~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~~k  288 (401)
T PLN02157        209 LACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGR  288 (401)
T ss_pred             HHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhhcc
Confidence            99999999999999876666567888889999999999886553222334445578899999999999999999764344


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV  312 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~  312 (312)
                      ..++|++++++.|.+.||.|+++|.++++++...++++++++|+++..+++....++||.|||+|.|+|||.
T Consensus       289 r~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~  360 (401)
T PLN02157        289 RKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDE  360 (401)
T ss_pred             cchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCC
Confidence            467999999999999999999999999999999999999999999999887411259999999999999873

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=100.00  E-value=2.1e-63  Score=458.68  Aligned_cols=312  Identities=47%  Similarity=0.813  Sum_probs=272.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++......+.......++...+.+...
T Consensus        21 ~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~  100 (381)
T PLN02988         21 ILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYV  100 (381)
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875322122112233445555566778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      +.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|+|||++++|+||
T Consensus       101 i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~LTG~~i~a~eA  180 (381)
T PLN02988        101 MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM  180 (381)
T ss_pred             HHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||||++||++++.+....++++...+|..+...++.+.................|++||+.+++++|++.|+....+
T Consensus       181 ~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~i~~~L~~~~~~  260 (381)
T PLN02988        181 LACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEEIISALEREATQ  260 (381)
T ss_pred             HHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHHHHHHHHhhccc
Confidence            99999999999999998888888888888889999998886543212234445588999999999999999999975322


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV  312 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~  312 (312)
                      ...+|++++++.|.+.||.|+++|++.++++...++.++++.|+++..+++....++||.|||||.|+||+.
T Consensus       261 ~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~  332 (381)
T PLN02988        261 EADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDK  332 (381)
T ss_pred             cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcCCCC
Confidence            356899999999999999999999999999999999999999999999987511249999999999999973

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=2.4e-63  Score=459.23  Aligned_cols=312  Identities=66%  Similarity=1.141  Sum_probs=275.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......+.+....++...+.+.+.
T Consensus        54 ~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~  133 (407)
T PLN02851         54 AAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYL  133 (407)
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999986533222234456677778888889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      +.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||++++|+||
T Consensus       134 i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~~L~LTG~~i~a~eA  213 (407)
T PLN02851        134 QGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEM  213 (407)
T ss_pred             HHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHHHHHHhCCcCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||+|+++|++++..+.+.+.++...++..+....+.+.....+...........|++||+.+++++|++.|+.....
T Consensus       214 ~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~  293 (407)
T PLN02851        214 IACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAAS  293 (407)
T ss_pred             HHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccc
Confidence            99999999999999977777777777777888888888776442223334555578999999999999999999975433


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV  312 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~  312 (312)
                      ...+|++++++.|.+.||.|+++|+++++++...+++++++.|+++..+++....++||.|||||.|+|||.
T Consensus       294 ~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~  365 (407)
T PLN02851        294 SYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDF  365 (407)
T ss_pred             cchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCC
Confidence            346899999999999999999999999999999999999999999998886211279999999999999973

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=2.6e-60  Score=440.01  Aligned_cols=308  Identities=44%  Similarity=0.774  Sum_probs=264.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++......  ......+....+.+...
T Consensus        23 ~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~~~~~~~~~~~~l~~~  100 (379)
T PLN02874         23 VITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DDSCLEVVYRMYWLCYH  100 (379)
T ss_pred             EEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--chHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987542111  11222333444556778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|++||++++|+||
T Consensus       101 i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA  180 (379)
T PLN02874        101 IHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEM  180 (379)
T ss_pred             HHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHHHHcCCcccHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999669999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||||++||++++.+.+..+.++...+...+..+++.+.................|..||+.+++.++++.+++..++
T Consensus       181 ~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~  260 (379)
T PLN02874        181 VACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASK  260 (379)
T ss_pred             HHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccc
Confidence            99999999999988877666666666666777777777665433333445556688899999999999999999987666


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                      ...+||.+++++|+++||.|++.+|++++.+...+++++++.|++.....+....++||+||++||+++|
T Consensus       261 ~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK  330 (379)
T PLN02874        261 TGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDK  330 (379)
T ss_pred             cccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcC
Confidence            6789999999999999999999999999998888999999999888766653223799999999998443

>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=1.3e-58  Score=405.42  Aligned_cols=309  Identities=50%  Similarity=0.811  Sum_probs=286.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+..||||.+|...+.-.+..++.++.+++||+.|.| ++||+|+|++.......++..+....++...|.+..
T Consensus        50 ~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~~~~fF~~eYsl~~  129 (401)
T KOG1684|consen   50 VITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPEVKKFFTEEYSLNH  129 (401)
T ss_pred             EEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999995 999999999987776666777788999999999999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE  159 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e  159 (312)
                      .+.++.||.||.+||..||||++|+.+.-||||||++.|.+||+.+|++|+.|++++++|+.|..+.|+.|||.++++.|
T Consensus       130 ~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg~lg~YLgLTG~rl~GaD  209 (401)
T KOG1684|consen  130 LIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPGYLGLYLGLTGQRLSGAD  209 (401)
T ss_pred             HHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCccHHHHhhhhccceecchH
Confidence            99999999999999999999999999999999999999999999999999999999999999977999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCH-HHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDP-SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      |+..||.+++||.+++..+.+++......+| +.+...++.|.....+.........+.|+.||+.+++++|++.|++..
T Consensus       210 ~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~tVeeIie~lk~~q  289 (401)
T KOG1684|consen  210 ALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSANTVEEIIEALKNYQ  289 (401)
T ss_pred             HHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccccHHHHHHHHHHHh
Confidence            9999999999999999999999864444444 789999999988877666667778899999999999999999885543


Q ss_pred             -CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCCC
Q 021410          239 -SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKHV  312 (312)
Q Consensus       239 -~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~~  312 (312)
                       +....+||.+++++|.+.||.|++.|.+.++++...++++++.+|+++..+...   +.||.||+||.|+|||.
T Consensus       290 ~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~---~~DF~EGvRA~LIDKd~  361 (401)
T KOG1684|consen  290 QSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLM---RGDFCEGVRAVLIDKDQ  361 (401)
T ss_pred             hhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhh---ccchhhhhhheeecCCc
Confidence             556789999999999999999999999999999999999999999999998876   99999999999999973

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=100.00  E-value=3.5e-58  Score=421.03  Aligned_cols=300  Identities=39%  Similarity=0.673  Sum_probs=256.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.||++|+|||||.| ++||+|+|++++.......+......++...+.++.
T Consensus        15 ~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (342)
T PRK05617         15 VITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNA   94 (342)
T ss_pred             EEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 999999999987543211111111134444556778


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE  159 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e  159 (312)
                      .+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|++||+.++|+|
T Consensus        95 ~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~e  174 (342)
T PRK05617         95 LIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAAD  174 (342)
T ss_pred             HHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHH
Confidence            89999999999999999999999999999999999999999999999999999999999998845999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhh-hcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      |+++||||+++|++++....+.+.++ ...+.+.+..++..+.... +. ..+......|++||+..++++++++|++. 
T Consensus       175 A~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~~~~l~~~-  251 (342)
T PRK05617        175 ALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPA-PA-SELAAQRAWIDECFAGDTVEDIIAALEAD-  251 (342)
T ss_pred             HHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCC-Cc-chhHHHHHHHHHHhCCCCHHHHHHHHHhc-
Confidence            99999999999998887654544322 2334445556665544332 22 25566778999999999999999999987 


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee-cc
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI-LN  309 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l-~~  309 (312)
                         .++|+.+++++|+++||.+++.+|+++++....+++++++.|...+..++.   ++|++||+++|+ ++
T Consensus       252 ---~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~egv~afl~ek  317 (342)
T PRK05617        252 ---GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR---SPDFVEGVRAVLIDK  317 (342)
T ss_pred             ---cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh---CCchhhccceEEEcC
Confidence               458999999999999999999999999998888999999999999999988   999999999998 44

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.8e-56  Score=392.70  Aligned_cols=241  Identities=28%  Similarity=0.370  Sum_probs=216.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..............+....+.++.
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (260)
T PRK05980         15 LLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTA   94 (260)
T ss_pred             EEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 799999999987542211112223445555567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++|++++|+
T Consensus        95 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~  174 (260)
T PRK05980         95 RLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAE  174 (260)
T ss_pred             HHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       175 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  197 (260)
T PRK05980        175 RALEIGLVNAVVPHEELLPAARA---------------------------------------------------------  197 (260)
T ss_pred             HHHHcCCCCcccCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877644433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .++++++.||.+++.+|++++.....++.++++.|...+..++.   ++|++||+.+|+++|+
T Consensus       198 ----------~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~  257 (260)
T PRK05980        198 ----------LARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG---SADLREGLAAWIERRR  257 (260)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhccCC
Confidence                      37889999999999999999988888999999999999999888   9999999999999986

>PLN02600 enoyl-CoA hydratase

Probab=100.00  E-value=2e-55  Score=388.08  Aligned_cols=237  Identities=24%  Similarity=0.330  Sum_probs=215.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||. |++||+|+|++++...    .......+...+..++.
T Consensus         7 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   82 (251)
T PLN02600          7 ELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSLRSTFS   82 (251)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999998 4899999999987532    12223345555667788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||+.++|+
T Consensus        83 ~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~  162 (251)
T PLN02600         83 SLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAR  162 (251)
T ss_pred             HHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+++|++++.+.+.                                                          
T Consensus       163 eA~~~Glv~~vv~~~~~~~~a~----------------------------------------------------------  184 (251)
T PLN02600        163 EAASMGLVNYCVPAGEAYEKAL----------------------------------------------------------  184 (251)
T ss_pred             HHHHcCCCcEeeChhHHHHHHH----------------------------------------------------------
Confidence            9999999999999887764333                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +.+++|++.||.+++.+|++++.....++++.++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       185 ---------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~  245 (251)
T PLN02600        185 ---------ELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK---TKDRLEGLAAFAEKRK  245 (251)
T ss_pred             ---------HHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence                     348999999999999999999988888999999999999999988   9999999999999985

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.9e-55  Score=387.07  Aligned_cols=236  Identities=22%  Similarity=0.312  Sum_probs=214.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...    +......+...++.++.
T Consensus        19 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   94 (256)
T PRK06143         19 TLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQASAEAFISRLRDLCD   94 (256)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----ChhhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 799999999987532    12223345556677888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|+ |++|++++|++++|.. +.+++++|+.++|+
T Consensus        95 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~  173 (256)
T PRK06143         95 AVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAA  173 (256)
T ss_pred             HHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHH
Confidence            899999999999999999999999999999999999999999999998 8888899999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       174 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  196 (256)
T PRK06143        174 QALAWGLVDRVVPLAELDAAVER---------------------------------------------------------  196 (256)
T ss_pred             HHHHCCCcCeecCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++++..||.+++.+|++++.....++++.++.|...+..++.   ++|++||+++|++||+
T Consensus       197 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~  256 (256)
T PRK06143        197 ----------LAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL---TGEPQRHMAAFLNRKR  256 (256)
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHhhcC
Confidence                      38999999999999999999988888999999999999988887   9999999999999874

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=100.00  E-value=3.7e-55  Score=390.87  Aligned_cols=241  Identities=22%  Similarity=0.299  Sum_probs=210.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..............+....+.++..
T Consensus        20 ~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (275)
T PRK09120         20 WVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRR   99 (275)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321111111122233345567788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus       100 l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~e  179 (275)
T PRK09120        100 LRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRK  179 (275)
T ss_pred             HHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++++.+.+                                                          
T Consensus       180 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  201 (275)
T PRK09120        180 AAEMGLVNESVPLAQLRARTRE----------------------------------------------------------  201 (275)
T ss_pred             HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998888754443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHH--HHHhhhcCCCC-ChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM--SLQGVSRLISG-DFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~--~~~~~~~~~~~-d~~eg~~a~l~~r~  311 (312)
                               .+++|+..||.+++.+|++++.....++.+.++.|...  ...++.   ++ |++||+++|+++|.
T Consensus       202 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~eg~~afl~kr~  264 (275)
T PRK09120        202 ---------LAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREEGLKQFLDDKS  264 (275)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHHHHHHHHhccc
Confidence                     38999999999999999999998888999999888654  334455   77 89999999999885

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=100.00  E-value=4.8e-55  Score=390.55  Aligned_cols=241  Identities=24%  Similarity=0.323  Sum_probs=213.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhcc---CC----hHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ---GK----LEECKDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~---~~----~~~~~~~~~~   73 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......   .+    ......+...
T Consensus        20 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (275)
T PLN02664         20 HLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKF   99 (275)
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987542110   01    1122233444


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcC
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG  152 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg  152 (312)
                      +++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||
T Consensus       100 ~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg  179 (275)
T PLN02664        100 LQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTG  179 (275)
T ss_pred             HHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhC
Confidence            56677889999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             CCCCHHHHHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410          153 AKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII  231 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (312)
                      +.++|+||+++||||++||+ +++.+.+.                                                   
T Consensus       180 ~~~~a~eA~~~GLv~~vv~~~~~l~~~~~---------------------------------------------------  208 (275)
T PLN02664        180 RRFSGSEAKELGLVSRVFGSKEDLDEGVR---------------------------------------------------  208 (275)
T ss_pred             CCCCHHHHHHcCCCceeeCChhHHHHHHH---------------------------------------------------
Confidence            99999999999999999985 66654333                                                   


Q ss_pred             HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                      +++++|+..||.+++.+|++++.....++.++++.|...+...+.   ++|++||+++|+++|+
T Consensus       209 ----------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~  269 (275)
T PLN02664        209 ----------------LIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLV---SDDLNEAVSAQIQKRK  269 (275)
T ss_pred             ----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHhccCC
Confidence                            348899999999999999999988888999999999998888877   9999999999999985

>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=6.9e-56  Score=377.34  Aligned_cols=235  Identities=26%  Similarity=0.325  Sum_probs=210.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+++..|+.+|.+++..+++|+.++++||||.|++||+|+|++++.......   -...   .+.+.+..
T Consensus        49 lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~---~~~~---~~~~~~~~  122 (290)
T KOG1680|consen   49 LITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQD---VSDG---IFLRVWDL  122 (290)
T ss_pred             EEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccccc---cccc---cccchhhh
Confidence            48999999999999999999999999999999999999999999999999999986532111   0011   11223334


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.+.+||+||+|||+|+|||++|++.||+|||+++|+|++|+.++|++|.+|++.+|+|.+|.. |+++++||++++|+|
T Consensus       123 ~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ltg~~~~Aqe  202 (290)
T KOG1680|consen  123 VSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMILTGRRLGAQE  202 (290)
T ss_pred             hhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHHHhcCcccHHH
Confidence            4479999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|.+++...+.                                                           
T Consensus       203 A~~~GlVn~Vvp~~~~l~eAv-----------------------------------------------------------  223 (290)
T KOG1680|consen  203 AKKIGLVNKVVPSGDALGEAV-----------------------------------------------------------  223 (290)
T ss_pred             HHhCCceeEeecchhHHHHHH-----------------------------------------------------------
Confidence            999999999999988653333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +++++|+++||.+++..|+.++.+.+.++.++++.|...+...+.   .+|.+|||.+|.++|.
T Consensus       224 --------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~---~~d~~Eg~~~f~~kr~  284 (290)
T KOG1680|consen  224 --------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFA---TEDRLEGMTAFAEKRK  284 (290)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhh---hHHHHHHHHHhcccCC
Confidence                    348999999999999999999999999999999999999999888   9999999999999885

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.9e-55  Score=389.31  Aligned_cols=241  Identities=23%  Similarity=0.294  Sum_probs=214.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-------cCChHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-------QGKLEECKDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-------~~~~~~~~~~~~~   73 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.....       .........+...
T Consensus        18 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (272)
T PRK06142         18 QVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILR   97 (272)
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccccchHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998754210       0011222233445


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcC
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG  152 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg  152 (312)
                      +.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++++++|
T Consensus        98 ~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g  177 (272)
T PRK06142         98 LQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTG  177 (272)
T ss_pred             HHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhC
Confidence            56778889999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             CCCCHHHHHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410          153 AKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII  231 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (312)
                      ++++|+||+++||||+|+|+ +++.+.+.+                                                  
T Consensus       178 ~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~--------------------------------------------------  207 (272)
T PRK06142        178 RDIDAAEAEKIGLVNRVYDDADALLAAAHA--------------------------------------------------  207 (272)
T ss_pred             CCcCHHHHHHcCCccEecCCHHHHHHHHHH--------------------------------------------------
Confidence            99999999999999999986 666544433                                                  


Q ss_pred             HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                       .+++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+.+|+++|+
T Consensus       208 -----------------~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~egv~af~~kr~  267 (272)
T PRK06142        208 -----------------TAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP---SKDLTEAIAAHMEKRP  267 (272)
T ss_pred             -----------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHhcCCC
Confidence                             37899999999999999999988888999999999999988887   9999999999999985

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.4e-55  Score=386.00  Aligned_cols=235  Identities=25%  Similarity=0.323  Sum_probs=212.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++...    +.  ...+...+..++..
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~----~~--~~~~~~~~~~~~~~   89 (257)
T PRK05862         16 LITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL----SF--MDVYKGDYITNWEK   89 (257)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc----ch--hHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532    11  11122333456778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      |.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus        90 l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e  169 (257)
T PRK05862         90 VARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAE  169 (257)
T ss_pred             HHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence            8999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+..                                                          
T Consensus       170 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  191 (257)
T PRK05862        170 AERAGLVSRVVPADKLLDEALA----------------------------------------------------------  191 (257)
T ss_pred             HHHcCCCCEeeCHhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++++++.+|.+++.+|++++.....++.++++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       192 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~~~~e~i~af~~kr~  251 (257)
T PRK05862        192 ---------AATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA---TEDQKEGMAAFVEKRK  251 (257)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhccCC
Confidence                     37889999999999999999998888999999999999999888   9999999999999885

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-54  Score=384.38  Aligned_cols=236  Identities=21%  Similarity=0.267  Sum_probs=213.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...    +......+...+..++.
T Consensus        15 ~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   89 (258)
T PRK09076         15 ILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAVAREMARRFGEAFE   89 (258)
T ss_pred             EEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----ChhhHHHHHHHHHHHHH
Confidence            589999986 999999999999999999999999999999999 789999999987531    12222334445567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus        90 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~  169 (258)
T PRK09076         90 ALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAA  169 (258)
T ss_pred             HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.                                                          
T Consensus       170 eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------  191 (258)
T PRK09076        170 TALRIGLVEEVVEKGEAREAAL----------------------------------------------------------  191 (258)
T ss_pred             HHHHCCCCceecCchhHHHHHH----------------------------------------------------------
Confidence            9999999999999887764333                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +++++|+..||.+++.+|++++.....++++.++.|...+..++.   ++|++||+++|+++|+
T Consensus       192 ---------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~  252 (258)
T PRK09076        192 ---------ALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD---TEDQREGVNAFLEKRA  252 (258)
T ss_pred             ---------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence                     348899999999999999999988888899999999999998887   9999999999999885

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.9e-55  Score=385.78  Aligned_cols=241  Identities=23%  Similarity=0.356  Sum_probs=216.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......+......+...+++++..
T Consensus        14 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (255)
T PRK07260         14 TLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFA   93 (255)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999876432112222222344455677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|+++|++++|+|
T Consensus        94 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~e  173 (255)
T PRK07260         94 IKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEK  173 (255)
T ss_pred             HHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+..                                                          
T Consensus       174 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  195 (255)
T PRK07260        174 ALEYGFVYRVAESEKLEKTCEQ----------------------------------------------------------  195 (255)
T ss_pred             HHHcCCcceecCHhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++++++.||.+++.+|+.++.....++++.++.|...+..++.   ++|++||+++|+++|+
T Consensus       196 ---------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~  255 (255)
T PRK07260        196 ---------LLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF---KEDFKEGVRAFSERRR  255 (255)
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhcCC
Confidence                     38899999999999999999998888999999999999988887   9999999999999875

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.3e-54  Score=383.61  Aligned_cols=235  Identities=26%  Similarity=0.253  Sum_probs=211.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++  +++|+|||||.|++||+|+|++++...    +......+...++.++..
T Consensus        14 ~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~   87 (255)
T PRK08150         14 TIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGMHHSRRWHRVFDK   87 (255)
T ss_pred             EEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999997  789999999999999999999987532    111222334455677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +.+|++||+.++|+|
T Consensus        88 l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~e  167 (255)
T PRK08150         88 IQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQE  167 (255)
T ss_pred             HHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       168 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  189 (255)
T PRK08150        168 GERLGLAQYLVPAGEALDKAME----------------------------------------------------------  189 (255)
T ss_pred             HHHcCCccEeeCchHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....+++++++.|...+...+.   ++|++||+++|+++|.
T Consensus       190 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~~kr~  249 (255)
T PRK08150        190 ---------LARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQS---APEAKERLRAFLEKKA  249 (255)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence                     38999999999999999999988888899999999988877777   9999999999999885

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=100.00  E-value=9.1e-55  Score=384.87  Aligned_cols=235  Identities=23%  Similarity=0.302  Sum_probs=212.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    +.  ...+......++..
T Consensus        14 ~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~--~~~~~~~~~~~~~~   87 (255)
T PRK09674         14 LLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK----DL--AATLNDPRPQLWQR   87 (255)
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc----ch--hhhHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987531    11  11122334457778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+|
T Consensus        88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~e  167 (255)
T PRK09674         88 LQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQ  167 (255)
T ss_pred             HHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            8999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       168 A~~~Glv~~vv~~~~~~~~a~-----------------------------------------------------------  188 (255)
T PRK09674        168 AQQAGLVSEVFPPELTLERAL-----------------------------------------------------------  188 (255)
T ss_pred             HHHcCCCcEecChHHHHHHHH-----------------------------------------------------------
Confidence            999999999999887764333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|+..||.+++.+|++++.....++.++++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       189 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~i~af~~kr~  249 (255)
T PRK09674        189 --------QLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA---TEDRHEGISAFLEKRT  249 (255)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence                    348999999999999999999988888999999999999999887   9999999999999885

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1e-54  Score=384.66  Aligned_cols=237  Identities=20%  Similarity=0.187  Sum_probs=209.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHH-HHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL-YSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.......    ...+.... ..+..
T Consensus        11 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~----~~~~~~~~~~~~~~   86 (255)
T PRK06563         11 LIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAG----GFPFPEGGIDPWGT   86 (255)
T ss_pred             EEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccc----hhhhhhhhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875421111    11111111 22233


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus        87 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  166 (255)
T PRK06563         87 VGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQ  166 (255)
T ss_pred             HHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHH
Confidence            57889999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       167 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  189 (255)
T PRK06563        167 EALRLGLVQEVVPPGEQLERAIE---------------------------------------------------------  189 (255)
T ss_pred             HHHHcCCCcEeeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877644433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|++++.....++.++++.|...+..++.   ++|++||+++|+++|+
T Consensus       190 ----------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  249 (255)
T PRK06563        190 ----------LAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT---SEDAKEGVQAFLERRP  249 (255)
T ss_pred             ----------HHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence                      37899999999999999999988888999999999999988887   9999999999999985

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=100.00  E-value=1.7e-54  Score=383.49  Aligned_cols=239  Identities=23%  Similarity=0.297  Sum_probs=212.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||.|++||+|+|++++.... ....+....+...+..++..
T Consensus        11 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   88 (256)
T TIGR02280        11 RLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTIETFYNPLVRR   88 (256)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999 99999999999999999999875321 11111111222223456778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|++++|+|
T Consensus        89 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e  168 (256)
T TIGR02280        89 LRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDART  168 (256)
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       169 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  190 (256)
T TIGR02280       169 AASWGLIWQVVDDAALMDEAQA----------------------------------------------------------  190 (256)
T ss_pred             HHHcCCcceeeChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++......+.++++.|...+..++.   ++|++||+.+|+++|+
T Consensus       191 ---------~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  250 (256)
T TIGR02280       191 ---------LAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR---SADYAEGVTAFLDKRN  250 (256)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHcCCC
Confidence                     37899999999999999999988888999999999999988887   9999999999999885

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.1e-54  Score=383.71  Aligned_cols=237  Identities=22%  Similarity=0.335  Sum_probs=215.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...    +......+...++.++.
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   91 (260)
T PRK07657         16 KITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEEQVRHAVSLIRTTME   91 (260)
T ss_pred             EEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----ChhhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 599999999987531    12233444555677888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||++++|+
T Consensus        92 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~  171 (260)
T PRK07657         92 MVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQ  171 (260)
T ss_pred             HHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+++|++++.+.+.+                                                         
T Consensus       172 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  194 (260)
T PRK07657        172 EAKEIGLVEFVVPAHLLEEKAIE---------------------------------------------------------  194 (260)
T ss_pred             HHHHcCCCCeecCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++++..+|.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|+++|+
T Consensus       195 ----------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~~r~  254 (260)
T PRK07657        195 ----------IAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP---TKDRLEGLQAFKEKRK  254 (260)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHhcCCC
Confidence                      37899999999999999999988888999999999999999888   9999999999999885

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=100.00  E-value=2e-54  Score=383.95  Aligned_cols=237  Identities=28%  Similarity=0.376  Sum_probs=214.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.| ++||+|+|++++...    +......+......++.
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   91 (260)
T PRK05809         16 VVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEEGRKFGLLGNKVFR   91 (260)
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 999999999987532    12222234444556788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+
T Consensus        92 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~  171 (260)
T PRK05809         92 KLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAE  171 (260)
T ss_pred             HHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.                                                          
T Consensus       172 eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------  193 (260)
T PRK05809        172 EALRIGLVNKVVEPEKLMEEAK----------------------------------------------------------  193 (260)
T ss_pred             HHHHcCCCCcccChHHHHHHHH----------------------------------------------------------
Confidence            9999999999999877654333                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +.+++++..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       194 ---------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~~r~  254 (260)
T PRK05809        194 ---------ALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS---TEDQTEGMTAFVEKRE  254 (260)
T ss_pred             ---------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                     348899999999999999999998888999999999999999998   9999999999999885

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.2e-54  Score=384.27  Aligned_cols=239  Identities=24%  Similarity=0.275  Sum_probs=209.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHH-HHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF-FRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~-~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.... ..+......+ ...+.. +.
T Consensus        17 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~-~~   94 (263)
T PRK07799         17 IVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKP-PGDSFKDGSYDPSRIDA-LL   94 (263)
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcc-ccchhhhhhhhhhHHHH-HH
Confidence            58999999999999999999999999999999999999999999999999999876421 1110000001 111222 23


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||++++|+
T Consensus        95 ~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~  174 (263)
T PRK07799         95 KGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAA  174 (263)
T ss_pred             HHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.                                                          
T Consensus       175 eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------  196 (263)
T PRK07799        175 EAKEIGLIGHVVPDGQALDKAL----------------------------------------------------------  196 (263)
T ss_pred             HHHHcCCccEecCcchHHHHHH----------------------------------------------------------
Confidence            9999999999999888764333                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +.+++|++.||.+++.+|++++.....++.++++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       197 ---------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~~r~  257 (263)
T PRK07799        197 ---------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL---SEDAKEGPRAFAEKRA  257 (263)
T ss_pred             ---------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHccCC
Confidence                     237899999999999999999988888999999999999988887   9999999999999885

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.9e-54  Score=387.10  Aligned_cols=241  Identities=21%  Similarity=0.286  Sum_probs=215.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......+......+.....+++..
T Consensus        29 ~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (277)
T PRK08258         29 TITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKA  108 (277)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999874321111222233444555678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccC-CCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. +++|+++|++++|+
T Consensus       109 l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  188 (277)
T PRK08258        109 MRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAE  188 (277)
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            9999999999999999999999999999999999999999999999995 788999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       189 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  211 (277)
T PRK08258        189 EGERWGFFNRLVEPEELLAEAQA---------------------------------------------------------  211 (277)
T ss_pred             HHHHcCCCcEecCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998777654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|+..||.+++.+|++++.....++++.++.|...+..++.   ++|++||+++|+++|.
T Consensus       212 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  271 (277)
T PRK08258        212 ----------LARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ---TEDFRRAYEAFVAKRK  271 (277)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence                      37899999999999999999988888999999999999999888   9999999999999985

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.2e-54  Score=384.14  Aligned_cols=240  Identities=23%  Similarity=0.294  Sum_probs=211.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++ |+++|+|||+|.|++||+|+|++++..............+...+..++..
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (262)
T PRK08140         16 TLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRR   94 (262)
T ss_pred             EEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999 99999999999999999999999874321001111111222223456778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus        95 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e  174 (262)
T PRK08140         95 LRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQ  174 (262)
T ss_pred             HHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       175 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  196 (262)
T PRK08140        175 AEQWGLIWRVVDDAALADEAQQ----------------------------------------------------------  196 (262)
T ss_pred             HHHcCCccEeeChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877644433                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....++.++++.|...+..++.   ++|++||+.+|+++|+
T Consensus       197 ---------~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~e~~~af~~kr~  256 (262)
T PRK08140        197 ---------LAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR---SADYAEGVSAFLEKRA  256 (262)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence                     38999999999999999999988888999999999999988887   9999999999999985

>PRK08139 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=3e-54  Score=383.45  Aligned_cols=237  Identities=20%  Similarity=0.267  Sum_probs=213.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...   ...+....++..+.+++..
T Consensus        23 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~   99 (266)
T PRK08139         23 TLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAYFRALFARCSRVMQA   99 (266)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532   1122233445556678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+++ +++|+|++|.. ++++++||++++|+|
T Consensus       100 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~e  178 (266)
T PRK08139        100 IVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAAT  178 (266)
T ss_pred             HHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999765 56899999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       179 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  200 (266)
T PRK08139        179 AREWGLVNRVVPADALDAAVAR----------------------------------------------------------  200 (266)
T ss_pred             HHHcCCccEeeChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|+++|+
T Consensus       201 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  260 (266)
T PRK08139        201 ---------LAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM---AEDAEEGIDAFLEKRP  260 (266)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence                     37999999999999999999998888999999999999988887   9999999999999885

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.6e-54  Score=383.16  Aligned_cols=235  Identities=26%  Similarity=0.368  Sum_probs=213.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++...   .   ....+....+.++..
T Consensus        20 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~---~~~~~~~~~~~~~~~   93 (261)
T PRK08138         20 LLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---G---AIEMYLRHTERYWEA   93 (261)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---c---hhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987531   1   111233445667888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|+++|+.++|+|
T Consensus        94 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e  173 (261)
T PRK08138         94 IAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPE  173 (261)
T ss_pred             HHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       174 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  195 (261)
T PRK08138        174 ALAIGLVSEVVEDEQTLPRALE----------------------------------------------------------  195 (261)
T ss_pred             HHHCCCCcEecCchHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887644333                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++++++.||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|+++|.
T Consensus       196 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~af~~kr~  255 (261)
T PRK08138        196 ---------LAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD---SEDQKEGMDAFLEKRK  255 (261)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                     37888999999999999999988888999999999999998888   9999999999999885

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.1e-54  Score=384.19  Aligned_cols=239  Identities=22%  Similarity=0.311  Sum_probs=216.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++....  .+.+....+....+.++.
T Consensus        23 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~  100 (269)
T PRK06127         23 RITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDAEAVAAYEQAVEAAQA  100 (269)
T ss_pred             EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cchHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999998 7999999999875321  112223344455567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||++++|+
T Consensus       101 ~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  180 (269)
T PRK06127        101 ALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAA  180 (269)
T ss_pred             HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|||++++.+.+.++                                                        
T Consensus       181 eA~~~Glv~~vv~~~~l~~~a~~~--------------------------------------------------------  204 (269)
T PRK06127        181 EALRIGLVHRVTAADDLETALADY--------------------------------------------------------  204 (269)
T ss_pred             HHHHcCCCCEeeCHHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999988876544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++++..||.+++.+|++++.....++++.++.|...+..++.   ++|++||+.+|+++|.
T Consensus       205 -----------a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~  263 (269)
T PRK06127        205 -----------AATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD---SEDYREGRAAFMEKRK  263 (269)
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHhcCCC
Confidence                       7899999999999999999988888999999999999988887   9999999999999985

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.7e-54  Score=384.42  Aligned_cols=241  Identities=21%  Similarity=0.327  Sum_probs=213.4

Q ss_pred             CEEecCCCCCCCCCH-HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhcc--CChHH-HHHHHHHHHH
Q 021410            1 MAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GKLEE-CKDFFRTLYS   76 (312)
Q Consensus         1 ~itln~p~~~Nal~~-~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~~~-~~~~~~~~~~   76 (312)
                      +||||||++.|++|. +|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++......  ..... ...+...+..
T Consensus        15 ~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (266)
T PRK09245         15 TLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQR   94 (266)
T ss_pred             EEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHH
Confidence            589999999999995 9999999999999999999999999999999999999987532110  01111 1223333456


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|+++|+++
T Consensus        95 ~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~  174 (266)
T PRK09245         95 IPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAI  174 (266)
T ss_pred             HHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCc
Confidence            77888999999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+|+|++++.+.+.+                                                      
T Consensus       175 ~a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------------------  200 (266)
T PRK09245        175 DAATALEWGLVSRVVPADQLLPAARA------------------------------------------------------  200 (266)
T ss_pred             CHHHHHHcCCcceecCHHHHHHHHHH------------------------------------------------------
Confidence            99999999999999998887654443                                                      


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                   .+++|++.||.+++.+|++++.....++++.++.|...+..++.   ++|++||+++|+++|+
T Consensus       201 -------------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  260 (266)
T PRK09245        201 -------------LAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHH---TADHREAVDAFLEKRP  260 (266)
T ss_pred             -------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHHcCCC
Confidence                         37999999999999999999988888899999999998888887   9999999999999985

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.5e-54  Score=381.95  Aligned_cols=237  Identities=23%  Similarity=0.319  Sum_probs=214.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++....   .......+......++..
T Consensus        14 ~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~   89 (257)
T PRK07658         14 VITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVT---EAEQATELAQLGQVTFER   89 (257)
T ss_pred             EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccC---chhhHHHHHHHHHHHHHH
Confidence            589999986 9999999999999999999999999999999999999999999875321   112223344555677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|+++|++++|+|
T Consensus        90 l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~e  169 (257)
T PRK07658         90 VEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAE  169 (257)
T ss_pred             HHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.                                                           
T Consensus       170 A~~~Glv~~vv~~~~l~~~a~-----------------------------------------------------------  190 (257)
T PRK07658        170 ALKWGLVNGVFPEETLLDDAK-----------------------------------------------------------  190 (257)
T ss_pred             HHHcCCcCeecChhHHHHHHH-----------------------------------------------------------
Confidence            999999999999887764433                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|++++.....++++.++.|...+..++.   ++|++||+.+|+++|+
T Consensus       191 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~  251 (257)
T PRK07658        191 --------KLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT---SEDAKEGVQAFLEKRK  251 (257)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                    347889999999999999999988888999999999999999887   9999999999999885

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5e-54  Score=381.48  Aligned_cols=240  Identities=22%  Similarity=0.277  Sum_probs=216.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.... .........+...+++++..
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   93 (260)
T PRK07511         15 VLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENR-AKPPSVQAASIDGLHDWIRA   93 (260)
T ss_pred             EEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcc-cccchhHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875421 11122333455666788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus        94 l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~e  173 (260)
T PRK07511         94 IRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAER  173 (260)
T ss_pred             HHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       174 A~~~Glv~~vv~~~~~~~~a~-----------------------------------------------------------  194 (260)
T PRK07511        174 LHALGVVNRLAEPGQALAEAL-----------------------------------------------------------  194 (260)
T ss_pred             HHHcCCccEeeCchHHHHHHH-----------------------------------------------------------
Confidence            999999999999877654333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.++++++.||.+++.+|+.++.....++.++++.|...+..++.   ++|+++|+++|+++|+
T Consensus       195 --------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~i~~f~~~r~  255 (260)
T PRK07511        195 --------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH---HADALEGIAAFLEKRA  255 (260)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhccCC
Confidence                    237888999999999999999998888999999999999999988   9999999999999885

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9e-54  Score=378.29  Aligned_cols=233  Identities=22%  Similarity=0.264  Sum_probs=206.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++...  . ....   ....+..+.  
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~--~-~~~~---~~~~~~~~~--   86 (254)
T PRK08252         15 IITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG--E-RPSI---PGRGFGGLT--   86 (254)
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc--c-chhh---hHHHHHHHH--
Confidence            5899999999999999999999999999999999999999999999999999987532  1 1111   111112222  


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      ...+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++++++|++++|+|
T Consensus        87 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~e  166 (254)
T PRK08252         87 ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAER  166 (254)
T ss_pred             HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHH
Confidence            2469999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       167 A~~~Glv~~vv~~~~l~~~a~-----------------------------------------------------------  187 (254)
T PRK08252        167 AHELGLVNRLTEPGQALDAAL-----------------------------------------------------------  187 (254)
T ss_pred             HHHcCCcceecCcchHHHHHH-----------------------------------------------------------
Confidence            999999999999888764333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.++++++.||.+++.+|++++.....++.++++.|...+..++.   ++|++||+.+|+++|+
T Consensus       188 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~  248 (254)
T PRK08252        188 --------ELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT---SADAKEGATAFAEKRA  248 (254)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhcCCC
Confidence                    348899999999999999999988888899999999999988887   9999999999999875

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9.2e-54  Score=379.90  Aligned_cols=239  Identities=20%  Similarity=0.255  Sum_probs=209.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|.|++++...... +..........+..++..
T Consensus        17 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~   95 (262)
T PRK07468         17 TLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRATRIEEARRLAMMLKA   95 (262)
T ss_pred             EEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhhHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532111 111111223345567888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++ ++|.. +++|++||++++|+|
T Consensus        96 l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~-~vG~~~a~~lll~g~~~~a~e  174 (262)
T PRK07468         96 LNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVA-RMGEANARRVFMSARLFDAEE  174 (262)
T ss_pred             HHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHh-hccHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999988664 48998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       175 A~~~Glv~~v~~~~~l~~~~~~----------------------------------------------------------  196 (262)
T PRK07468        175 AVRLGLLSRVVPAERLDAAVEA----------------------------------------------------------  196 (262)
T ss_pred             HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998776644433                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++++++.||.+++.+|++++......+++.++.|...+..++.   ++|++||+++|+++|.
T Consensus       197 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~~kr~  256 (262)
T PRK07468        197 ---------EVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE---TEEAREGIAAFFDKRA  256 (262)
T ss_pred             ---------HHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                     37899999999999999999987666789999999999888888   9999999999999985

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9e-54  Score=380.25  Aligned_cols=239  Identities=23%  Similarity=0.320  Sum_probs=209.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..........+..++..
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~~~   94 (262)
T PRK05995         16 TVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYS-DDENRADARRLADMLRA   94 (262)
T ss_pred             EEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccC-chhhhhHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321111 11111223345677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +++++|.. +.+|+++|++|+|+|
T Consensus        95 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~~l~l~g~~~~a~e  173 (262)
T PRK05995         95 IYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAARRYFLTAERFDAAE  173 (262)
T ss_pred             HHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHHHHHHcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999887655 88999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       174 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  195 (262)
T PRK05995        174 ALRLGLVHEVVPAEALDAKVDE----------------------------------------------------------  195 (262)
T ss_pred             HHHcCCCCeecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|++.||.+++.+|++++.....++.+. ++.|...+..++.   ++|++||+++|+++|.
T Consensus       196 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~~kr~  256 (262)
T PRK05995        196 ---------LLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA---TEEAREGVAAFLEKRK  256 (262)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                     3789999999999999999998877888888 8888888888887   9999999999999985

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.3e-54  Score=378.24  Aligned_cols=233  Identities=21%  Similarity=0.262  Sum_probs=207.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.....  +.   ..+...+.+++..
T Consensus        18 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~--~~---~~~~~~~~~~~~~   92 (251)
T PRK06023         18 VIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAM--GG---TSFGSEILDFLIA   92 (251)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccc--cc---hhhHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998753211  11   1122344567788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.++++||+.++|+|
T Consensus        93 l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~e  172 (251)
T PRK06023         93 LAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEA  172 (251)
T ss_pred             HHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       173 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  194 (251)
T PRK06023        173 AQEAGLIWKIVDEEAVEAETLK----------------------------------------------------------  194 (251)
T ss_pred             HHHcCCcceeeCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877644433                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN  309 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~  309 (312)
                               .+++|+..||.+++.+|++++... ..+.+.++.|.+.+..++.   ++|++||+++|+++
T Consensus       195 ---------~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~---~~~~~e~~~af~e~  251 (251)
T PRK06023        195 ---------AAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK---SAEARAAFEAFMRR  251 (251)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcC
Confidence                     389999999999999999998764 4688999999888888887   99999999999864

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.1e-53  Score=379.57  Aligned_cols=239  Identities=22%  Similarity=0.248  Sum_probs=206.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+..........+++++..
T Consensus        18 ~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   96 (265)
T PRK05674         18 TLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSA-DLDYNTNLDDARELAELMYN   96 (265)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcc-cccchhhhHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321 10111111122334567888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ +++++|.. ++++++||+.|+|+|
T Consensus        97 l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a~~l~ltg~~~~a~e  175 (265)
T PRK05674         97 LYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAARRYALTAERFDGRR  175 (265)
T ss_pred             HHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHHHHHHHhCcccCHHH
Confidence            9999999999999999999999999999999999999999999999999887654 88999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       176 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  197 (265)
T PRK05674        176 ARELGLLAESYPAAELEAQVEA----------------------------------------------------------  197 (265)
T ss_pred             HHHCCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998777654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH-HHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE-YRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e-~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|+..||.+++.+|++++.....++.++++.+ ...+..++.   ++|++||+++|+++|+
T Consensus       198 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~e~~~af~~kr~  258 (265)
T PRK05674        198 ---------WIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRV---SAEGQEGLRAFLEKRT  258 (265)
T ss_pred             ---------HHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhc---CHHHHHHHHHHHccCC
Confidence                     37899999999999999999998888888888754 455666666   9999999999999885

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.5e-53  Score=379.65  Aligned_cols=241  Identities=20%  Similarity=0.278  Sum_probs=213.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCC-ceEEEEEeCCCceeccCCchhHHHhhccC--ChHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPN-IGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KLEECKDFFRTLYSF   77 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~-v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~~~~~~~~~~~~~~~   77 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|++ +|+|||||.|++||+|+|++++.......  .......+...++.+
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (266)
T PRK05981         16 ILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPF   95 (266)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccchhHHHHHHHHHHH
Confidence            589999999999999999999999999998864 99999999999999999999875321110  001122334445678


Q ss_pred             HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      +..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +++|++||++++
T Consensus        96 ~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~  175 (266)
T PRK05981         96 LRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLP  175 (266)
T ss_pred             HHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcC
Confidence            8889999999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+++|++++.+.+.+                                                       
T Consensus       176 a~eA~~~Glv~~vv~~~~~~~~a~~-------------------------------------------------------  200 (266)
T PRK05981        176 AETALQWGLVNRVVDDAELMAEAMK-------------------------------------------------------  200 (266)
T ss_pred             HHHHHHcCCceEeeCHhHHHHHHHH-------------------------------------------------------
Confidence            9999999999999998887644332                                                       


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  .+++++..||.+++.+|++++.....++.+.++.|...+..++.   ++|++||+.+|+++|+
T Consensus       201 ------------~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~e~~~af~~kr~  260 (266)
T PRK05981        201 ------------LAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK---TEDFKEGVGAFLQKRP  260 (266)
T ss_pred             ------------HHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence                        37889999999999999999988888999999999999988887   9999999999999986

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.2e-53  Score=376.89  Aligned_cols=234  Identities=24%  Similarity=0.309  Sum_probs=205.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....  .....    ...+..+ .
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~--~~~~~----~~~~~~~-~   88 (259)
T PRK06494         16 IVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG--KRGWP----ESGFGGL-T   88 (259)
T ss_pred             EEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC--cchhh----hHHHHHH-H
Confidence            5899999999999999999999999999999999999999998 7999999999875321  11111    1112222 3


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+
T Consensus        89 ~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~  168 (259)
T PRK06494         89 SRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAR  168 (259)
T ss_pred             HHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHH
Confidence            34589999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+++|++++.+.+.+                                                         
T Consensus       169 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  191 (259)
T PRK06494        169 EGLELGFVNEVVPAGELLAAAER---------------------------------------------------------  191 (259)
T ss_pred             HHHHcCCCcEecCHhHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877654433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHH--HHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVRE--YRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e--~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|++++.....+++++++.|  ...+..++.   ++|++||+++|+++|.
T Consensus       192 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~d~~eg~~af~~kr~  253 (259)
T PRK06494        192 ----------WADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRA---SQDYIEGPKAFAEKRP  253 (259)
T ss_pred             ----------HHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc---CccHHHHHHHHHccCC
Confidence                      37899999999999999999988888999999999  456667776   9999999999999875

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-53  Score=376.10  Aligned_cols=233  Identities=22%  Similarity=0.314  Sum_probs=208.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ..   .......++..+..
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-~~---~~~~~~~~~~~~~~   90 (249)
T PRK05870         15 LITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPG-RP---AEDGLRRIYDGFLA   90 (249)
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccc-cc---hHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998764211 11   12233445566778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||+.++|+|
T Consensus        91 l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~e  170 (249)
T PRK05870         91 VASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEA  170 (249)
T ss_pred             HHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHH
Confidence            8999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++  +++.+.+.                                                           
T Consensus       171 A~~~Glv~~vv--~~l~~~a~-----------------------------------------------------------  189 (249)
T PRK05870        171 AVRHGLALMVA--DDPVAAAL-----------------------------------------------------------  189 (249)
T ss_pred             HHHcCCHHHHH--hhHHHHHH-----------------------------------------------------------
Confidence            99999999999  45554333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN  309 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~  309 (312)
                              +.++++++.||.+++.+|++++.... .+++++++.|...+...+.   ++|++||+++|+++
T Consensus       190 --------~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~~  249 (249)
T PRK05870        190 --------ELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ---SPEFAARLAAAQRR  249 (249)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcC
Confidence                    34899999999999999999998877 8899999999999988887   99999999999863

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-53  Score=377.57  Aligned_cols=236  Identities=22%  Similarity=0.278  Sum_probs=213.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.+ .|+++|+|||+|.|++||+|+|++++....   +......+...+++++..
T Consensus        18 ~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~~   93 (260)
T PRK07659         18 TIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSN---DESKFDGVMNTISEIVVT   93 (260)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhcc---CchhHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999 588999999999999999999999875321   122334455666778888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus        94 l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~e  173 (260)
T PRK07659         94 LYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATE  173 (260)
T ss_pred             HHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++ ++++.+.+.                                                           
T Consensus       174 A~~~Glv~~vv-~~~~~~~a~-----------------------------------------------------------  193 (260)
T PRK07659        174 ALDLGLIDEVI-GGDFQTAAK-----------------------------------------------------------  193 (260)
T ss_pred             HHHcCChHHHh-hhHHHHHHH-----------------------------------------------------------
Confidence            99999999999 666654333                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|++++.....++++.++.|.+.+..++.   ++|++||+.+|+++|+
T Consensus       194 --------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~  254 (260)
T PRK07659        194 --------QKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ---TADHKEGIRAFLEKRL  254 (260)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHhHHHHHHHHhcCCC
Confidence                    337899999999999999999988888999999999999988888   9999999999999985

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.9e-53  Score=372.84  Aligned_cols=234  Identities=21%  Similarity=0.214  Sum_probs=207.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...   ........+......++..
T Consensus        14 ~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~   89 (249)
T PRK07938         14 EVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRGCFAAFRA   89 (249)
T ss_pred             EEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHHHHHHHHH
Confidence            589999985 999999999999999999999999999999999999999999986531   1112222233444567778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++   |++++|++++|.. ++++++||+.|+|+|
T Consensus        90 i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~e  166 (249)
T PRK07938         90 VYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAE  166 (249)
T ss_pred             HHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHH
Confidence            999999999999999999999999999999999999999999999985   4567899999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||++||++++.+.+.+                                                          
T Consensus       167 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  188 (249)
T PRK07938        167 LHHFGSVEEVVPRDQLDEAALE----------------------------------------------------------  188 (249)
T ss_pred             HHHCCCccEEeCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|+..||.+++.+|++++.....++++.++.|...+..++.   ++|++||+++|++||+
T Consensus       189 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~ekr~  248 (249)
T PRK07938        189 ---------VARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNL---AGVSDEHRDAFVEKRK  248 (249)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHHhcCC
Confidence                     38899999999999999999988788899999999998888887   9999999999999986

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=100.00  E-value=2.9e-53  Score=375.90  Aligned_cols=237  Identities=18%  Similarity=0.219  Sum_probs=204.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ........  ......++.
T Consensus        15 ~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~~--~~~~~~~~~   91 (259)
T TIGR01929        15 KITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYG-YIDDSGVH--RLNVLDVQR   91 (259)
T ss_pred             EEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcc-ccchhhHH--HHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 7999999999764211 00111111  112345677


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|++++|+
T Consensus        92 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~  171 (259)
T TIGR01929        92 QIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAE  171 (259)
T ss_pred             HHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHH
Confidence            88899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       172 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  194 (259)
T TIGR01929       172 QALDMGLVNTVVPLADLEKETVR---------------------------------------------------------  194 (259)
T ss_pred             HHHHcCCcccccCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998777644433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|+..||.+++.+|++++..... .....+.|.+.+...+.   ++|++||+++|+++|+
T Consensus       195 ----------~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~---~~d~~egi~af~~kr~  253 (259)
T TIGR01929       195 ----------WCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYM---TEEGQEGRNAFLEKRQ  253 (259)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhc---CccHHHHHHHHhccCC
Confidence                      38999999999999999999876443 45556667777777777   9999999999999985

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.4e-53  Score=378.83  Aligned_cols=241  Identities=20%  Similarity=0.264  Sum_probs=206.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC---ChHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---KLEECKDFFRTLYSF   77 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~~~~~~~~~~~~~~~   77 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.......   +......+...+..+
T Consensus        22 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (276)
T PRK05864         22 LITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDV  101 (276)
T ss_pred             EEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999864211000   111112233445567


Q ss_pred             HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccC-CCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p-~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      +..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++|.. +.++++||+++
T Consensus       102 ~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~  181 (276)
T PRK05864        102 ILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDV  181 (276)
T ss_pred             HHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCcc
Confidence            7788899999999999999999999999999999999999999999999997 788999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+++|++++.+.+.+                                                      
T Consensus       182 ~a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------------------  207 (276)
T PRK05864        182 DAEEAERIGLVSRQVPDEQLLDTCYA------------------------------------------------------  207 (276)
T ss_pred             CHHHHHHcCCcceeeCHHHHHHHHHH------------------------------------------------------
Confidence            99999999999999998877654443                                                      


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHH-HhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSL-QGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~-~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                   .+++|+..||.+++.+|++++..... ++++.++.|..... ..+.   ++|++||+++|+++|+
T Consensus       208 -------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~~d~~e~~~af~~kr~  269 (276)
T PRK05864        208 -------------IAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---TANFEEAVAARAEKRP  269 (276)
T ss_pred             -------------HHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---ChhHHHHHHHHhccCC
Confidence                         37999999999999999999887664 78888888865432 3455   9999999999999985

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.6e-53  Score=379.28  Aligned_cols=241  Identities=26%  Similarity=0.333  Sum_probs=210.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCCh--HHHHHH----HHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL--EECKDF----FRTL   74 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~--~~~~~~----~~~~   74 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.........  .....+    ...+
T Consensus        18 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (272)
T PRK06210         18 VITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDY   97 (272)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccccccccchhhhhhhhhhH
Confidence            5899999999999999999999999999999999999999999999999999987542110000  000111    1123


Q ss_pred             HHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCC
Q 021410           75 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA  153 (312)
Q Consensus        75 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~  153 (312)
                      ++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +++|++||+
T Consensus        98 ~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~  177 (272)
T PRK06210         98 QTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSAR  177 (272)
T ss_pred             HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCC
Confidence            4556788899999999999999999999999999999999999999999999999999999999999999 999999999


Q ss_pred             CCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHH
Q 021410          154 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS  233 (312)
Q Consensus       154 ~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (312)
                      .++|+||+++||||+++|++++.+.+.+                                                    
T Consensus       178 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------  205 (272)
T PRK06210        178 TFYAEEALRLGLVNRVVPPDELMERTLA----------------------------------------------------  205 (272)
T ss_pred             ccCHHHHHHcCCcceecCHHHHHHHHHH----------------------------------------------------
Confidence            9999999999999999998776543332                                                    


Q ss_pred             HHcccCCCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          234 LESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       234 l~~~~~~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                     .+++|++. +|.++..+|++++.....+++++++.|...+..++.   ++|++||+++|+++|+
T Consensus       206 ---------------~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~af~~kr~  266 (272)
T PRK06210        206 ---------------YAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ---RPDFIEGVASFLEKRP  266 (272)
T ss_pred             ---------------HHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc---CccHHHHHHHHhccCC
Confidence                           37888875 999999999999998888999999999999888887   9999999999999985

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.3e-53  Score=376.61  Aligned_cols=235  Identities=23%  Similarity=0.319  Sum_probs=203.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++....  ........+......++..
T Consensus        24 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~  101 (268)
T PRK07327         24 EIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMA--DDFEVRARVWREARDLVYN  101 (268)
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhcc--CcHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875421  1222233344555677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||++++|+|
T Consensus       102 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e  181 (268)
T PRK07327        102 VINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEE  181 (268)
T ss_pred             HHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       182 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  203 (268)
T PRK07327        182 AERIGLVSLAVDDDELLPKALE----------------------------------------------------------  203 (268)
T ss_pred             HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++....   ..+++.+..|.    ..+.   ++|++||+.+|+++|+
T Consensus       204 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~eg~~af~ekr~  262 (268)
T PRK07327        204 ---------VAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVREGLASLREKRA  262 (268)
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHHHHHHHHHhcCC
Confidence                     3899999999999999999986522   24555555443    3455   9999999999999985

>PLN02888 enoyl-CoA hydratase

Probab=100.00  E-value=4.4e-53  Score=375.58  Aligned_cols=236  Identities=21%  Similarity=0.270  Sum_probs=208.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+   .   ......++..
T Consensus        22 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~---~---~~~~~~~~~~   94 (265)
T PLN02888         22 TITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGD---V---KDVETDPVAQ   94 (265)
T ss_pred             EEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cch---h---hHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999864321 111   1   1112345667


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+|
T Consensus        95 i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e  174 (265)
T PLN02888         95 MERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAET  174 (265)
T ss_pred             HHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||++||++++.+.+.                                                           
T Consensus       175 A~~~Glv~~vv~~~~l~~~a~-----------------------------------------------------------  195 (265)
T PLN02888        175 AERWGLVNHVVEESELLKKAR-----------------------------------------------------------  195 (265)
T ss_pred             HHHcCCccEeeChHHHHHHHH-----------------------------------------------------------
Confidence            999999999999877654443                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +++++|++.+|.+++.+|++++.....+++++++.|...+..++. ..++|++||+++|+++|+
T Consensus       196 --------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~-~~~~d~~e~~~af~ekr~  258 (265)
T PLN02888        196 --------EVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYN-GMTKEQFQKMQEFIAGRS  258 (265)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHhcCC
Confidence                    348999999999999999999988888999999999887777651 128999999999999985

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.7e-53  Score=375.92  Aligned_cols=236  Identities=27%  Similarity=0.372  Sum_probs=215.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....  ...   ..+...+++++..
T Consensus        17 ~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~~---~~~~~~~~~~~~~   91 (259)
T PRK06688         17 TITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PKP---PDELAPVNRFLRA   91 (259)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cch---HHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999876421  111   2345556778888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.+++++|++++|+|
T Consensus        92 l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~e  171 (259)
T PRK06688         92 IAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEE  171 (259)
T ss_pred             HHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       172 A~~~Glv~~v~~~~~l~~~a~~----------------------------------------------------------  193 (259)
T PRK06688        172 ALRIGLVNRVVPAAELDAEADA----------------------------------------------------------  193 (259)
T ss_pred             HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998776644333                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....++++++..|.+.+..++.   ++|+++|+++|+++|+
T Consensus       194 ---------~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~af~~~~~  253 (259)
T PRK06688        194 ---------QAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR---TPDFREGATAFIEKRK  253 (259)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                     37889999999999999999998888999999999999999988   9999999999999875

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=100.00  E-value=8.2e-53  Score=373.06  Aligned_cols=236  Identities=30%  Similarity=0.415  Sum_probs=210.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..   ..+......+....+.++..
T Consensus        17 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~~~~~~~~~~~~~~   93 (257)
T COG1024          17 VITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAAENLMQPGQDLLRA   93 (257)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHHHHHHhHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999999864   11122222566667789999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++|.. +.+|++||+.++++|
T Consensus        94 l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~e  173 (257)
T COG1024          94 LADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAE  173 (257)
T ss_pred             HHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999889999999999999 999999999999999


Q ss_pred             HHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          160 MMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       160 A~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      |+++|||++++++ +++.+.+.++                                                        
T Consensus       174 A~~~Glv~~vv~~~~~l~~~a~~~--------------------------------------------------------  197 (257)
T COG1024         174 ALELGLVDEVVPDAEELLERALEL--------------------------------------------------------  197 (257)
T ss_pred             HHHcCCcCeeeCCHHHHHHHHHHH--------------------------------------------------------
Confidence            9999999999985 4665444433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++++. +|.++..+|+.++......+++.++.|...+...+.   ++|++||+++|++ |+
T Consensus       198 -----------a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~d~~eg~~a~~~-r~  254 (257)
T COG1024         198 -----------ARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS---SEDFREGVRAFLE-RK  254 (257)
T ss_pred             -----------HHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc---ChhHHHHHHHHHc-cC
Confidence                       566655 999999999999988777799999999999888776   9999999999998 64

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=100.00  E-value=5.9e-53  Score=373.33  Aligned_cols=234  Identities=18%  Similarity=0.191  Sum_probs=199.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...   .+..  ..+...+..++.
T Consensus        14 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~---~~~~--~~~~~~~~~~~~   88 (256)
T TIGR03210        14 WIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG---YDGR--GTIGLPMEELHS   88 (256)
T ss_pred             EEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc---ccch--hHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 799999999987421   1111  112233456778


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|.. ++++++||+.++|+
T Consensus        89 ~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~  168 (256)
T TIGR03210        89 AIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQ  168 (256)
T ss_pred             HHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHH
Confidence            89999999999999999999999999999999999999999999999998888899999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+++|++++.+.+.+                                                         
T Consensus       169 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  191 (256)
T TIGR03210       169 EALAMGLVNAVVPHDQLDAEVQK---------------------------------------------------------  191 (256)
T ss_pred             HHHHcCCceeeeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCH-HHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF-DECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l-~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|++++....... .+.+  |...+..++.   ++|++||+++|+++|+
T Consensus       192 ----------~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~--~~~~~~~~~~---~~d~~e~~~af~~kr~  250 (256)
T TIGR03210       192 ----------WCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGM--GMYALKLYYD---TAESREGVKAFQEKRK  250 (256)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHhhcccchHHHH--HHHHHHHHcc---ChhHHHHHHHHhccCC
Confidence                      3899999999999999999987643321 1222  3345555666   9999999999999985

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=100.00  E-value=8.4e-53  Score=373.53  Aligned_cols=235  Identities=22%  Similarity=0.310  Sum_probs=206.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....  .. .  ..+.......+.
T Consensus        15 ~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~--~~-~--~~~~~~~~~~~~   88 (261)
T PRK03580         15 EITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE--AP-D--ADFGPGGFAGLT   88 (261)
T ss_pred             EEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC--cc-h--hhhhhhhhHHHH
Confidence            58999996 5999999999999999999999999999999999 7999999999875321  11 1  112122234567


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+
T Consensus        89 ~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~  168 (261)
T PRK03580         89 EIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAE  168 (261)
T ss_pred             HHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+++|++++.+.+..+                                                        
T Consensus       169 eA~~~Glv~~vv~~~~l~~~a~~~--------------------------------------------------------  192 (261)
T PRK03580        169 EALRWGIVNRVVPQAELMDRAREL--------------------------------------------------------  192 (261)
T ss_pred             HHHHcCCCcEecCHhHHHHHHHHH--------------------------------------------------------
Confidence            999999999999988876544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHH----HHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR----MSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~----~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|+..||.+++.+|++++.....+++++++.|..    .+..++.   ++|++||+++|+++|+
T Consensus       193 -----------a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---~~d~~e~~~af~ekr~  255 (261)
T PRK03580        193 -----------AQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLH---SEDALEGPRAFAEKRD  255 (261)
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhc---CccHHHHHHHHhcCCC
Confidence                       789999999999999999998888889999998874    5566676   9999999999999985

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.2e-52  Score=371.80  Aligned_cols=235  Identities=22%  Similarity=0.330  Sum_probs=209.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....  ........+...+++++..
T Consensus        16 ~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~   92 (257)
T PRK06495         16 VVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGDLRAHNRRTRECFHA   92 (257)
T ss_pred             EEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchhHHHHHHHHHHHHHH
Confidence            58999998 59999999999999999999999999999999999999999999875321  1112223344455677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++   |+++++++++|.. +.+|+++|+.++|+|
T Consensus        93 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~e  169 (257)
T PRK06495         93 IRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAE  169 (257)
T ss_pred             HHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHH
Confidence            999999999999999999999999999999999999999999999996   4567899999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       170 A~~~GLv~~vv~~~~~~~~a~~----------------------------------------------------------  191 (257)
T PRK06495        170 LYRRGVIEACLPPEELMPEAME----------------------------------------------------------  191 (257)
T ss_pred             HHHcCCcceecCHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....+++++++.|.+.+...+.   ++|++||+++|+++|+
T Consensus       192 ---------~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~af~~kr~  251 (257)
T PRK06495        192 ---------IAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK---TEDAKEAQRAFLEKRP  251 (257)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChHHHHHHHHHhccCC
Confidence                     38999999999999999999988888999999999999988887   9999999999999985

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.2e-53  Score=372.18  Aligned_cols=234  Identities=24%  Similarity=0.229  Sum_probs=204.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....    .......  ....+...
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~----~~~~~~~--~~~~~~~~   88 (254)
T PRK08259         15 TVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGR----GNRLHPS--GDGPMGPS   88 (254)
T ss_pred             EEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhccc----chhhhhh--hcchhhhH
Confidence            58999999999999999999999999999999999999999999999999999875321    1111100  00111122


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+++++|+.++|+|
T Consensus        89 ~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~e  168 (254)
T PRK08259         89 RMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADE  168 (254)
T ss_pred             HhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            3479999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       169 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  190 (254)
T PRK08259        169 ALAIGLANRVVPKGQARAAAEE----------------------------------------------------------  190 (254)
T ss_pred             HHHcCCCCEeeChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|++.||.+++.+|++++.....+++++++.|...+...+    ++|++||+++|+++|.
T Consensus       191 ---------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~----~~d~~egi~af~~~~~  249 (254)
T PRK08259        191 ---------LAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL----AAEALEGAARFAAGAG  249 (254)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH----hhHHHHHHHHHHhhhc
Confidence                     3889999999999999999998878889999999988776665    4999999999998874

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=100.00  E-value=2.8e-53  Score=373.85  Aligned_cols=235  Identities=30%  Similarity=0.476  Sum_probs=220.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+||++|.|++||+|.|++++...    +......+...++.++..
T Consensus        10 ~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~~~~~~l~~~   85 (245)
T PF00378_consen   10 TITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFFRRFQELLSR   85 (245)
T ss_dssp             EEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccchhhcccccc
Confidence            5899999999999999999999999999999999999999999999999999998765    345566788888999999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+||||||+|||+|+|||++++++||+|||+++++|++||+++|++|++|++++|+|++|.. +.++++||++++|+|
T Consensus        86 l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~e  165 (245)
T PF00378_consen   86 LANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEE  165 (245)
T ss_dssp             HHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHH
T ss_pred             chhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccccccchhHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+..                                                          
T Consensus       166 A~~~Glv~~v~~~~~l~~~a~~----------------------------------------------------------  187 (245)
T PF00378_consen  166 ALELGLVDEVVPDEELDEEALE----------------------------------------------------------  187 (245)
T ss_dssp             HHHTTSSSEEESGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHhhcceeEEcCchhhhHHHHH----------------------------------------------------------
Confidence            9999999999999887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN  309 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~  309 (312)
                               .+++++..||.+++.+|+.+++.....+.+.++.|.+.+..++.   ++|++||+++|++|
T Consensus       188 ---------~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~f~eK  245 (245)
T PF00378_consen  188 ---------LAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK---SEDFQEGIAAFLEK  245 (245)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTT
T ss_pred             ---------HHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC---CHHHHHHHHHHhCc
Confidence                     38999999999999999999999888999999999999999998   99999999999986

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.4e-52  Score=367.75  Aligned_cols=231  Identities=25%  Similarity=0.322  Sum_probs=206.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++....       ...+...++.++..
T Consensus        12 ~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~-------~~~~~~~~~~~~~~   84 (248)
T PRK06072         12 IVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDF-------AIDLRETFYPIIRE   84 (248)
T ss_pred             EEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhh-------HHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875311       12233445667788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|..+.++++||++|+|+||
T Consensus        85 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll~g~~~~a~eA  164 (248)
T PRK06072         85 IRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEA  164 (248)
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHHhCCccCHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999669999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||||++   +++.+.+.                                                            
T Consensus       165 ~~~Glv~~~---~~~~~~a~------------------------------------------------------------  181 (248)
T PRK06072        165 ERWGLLKIS---EDPLSDAE------------------------------------------------------------  181 (248)
T ss_pred             HHCCCcccc---chHHHHHH------------------------------------------------------------
Confidence            999999953   23332222                                                            


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                             +.+++|++.||.+++.+|++++.....++++.++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       182 -------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  242 (248)
T PRK06072        182 -------EMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGK---TEDFKEGISSFKEKRE  242 (248)
T ss_pred             -------HHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhC---ChhHHHHHHHHhcCCC
Confidence                   348999999999999999999988888999999999999988887   9999999999999985

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.6e-52  Score=371.73  Aligned_cols=234  Identities=25%  Similarity=0.322  Sum_probs=204.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.| ++||+|+|++++....   ..+....+...+.+++.
T Consensus        20 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~   96 (262)
T PRK06144         20 RITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS---TAEDAVAYERRIDRVLG   96 (262)
T ss_pred             EEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc---chhHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999998 7999999999875421   11222234445567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc-ccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~-~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++|.. ++++++||++++|
T Consensus        97 ~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a  176 (262)
T PRK06144         97 ALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEA  176 (262)
T ss_pred             HHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCH
Confidence            899999999999999999999999999999999999999999997 99999999999999999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++||||+|+|++++.+.+.+                                                        
T Consensus       177 ~eA~~~Glv~~vv~~~~l~~~a~~--------------------------------------------------------  200 (262)
T PRK06144        177 EEALAAGLVNEVVEDAALDARADA--------------------------------------------------------  200 (262)
T ss_pred             HHHHHcCCcCeecCHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999998877644433                                                        


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 .+++|++.||.+++.+|+.++......+    +.+.+.+..++.   ++|++||+.+|+++|+
T Consensus       201 -----------~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~~---~~~~~e~~~af~~kr~  256 (262)
T PRK06144        201 -----------LAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCYM---SEDFREGVEAFLEKRP  256 (262)
T ss_pred             -----------HHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHhc---ChHHHHHHHHHhcCCC
Confidence                       4899999999999999999987655444    444556666776   9999999999999885

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=100.00  E-value=2.4e-52  Score=368.06  Aligned_cols=231  Identities=21%  Similarity=0.267  Sum_probs=201.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.||++|+|||||.|++||+|.|++++..       .....+.....+++..
T Consensus        13 ~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~~~~~~~~~~~   84 (251)
T TIGR03189        13 RLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAMLASLHKLVIA   84 (251)
T ss_pred             EEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHHHHHHHHHHHH
Confidence            58999997 599999999999999999999999999999999999999999997531       1112233445667888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ +++++|++++|.. +++|++||++++|+|
T Consensus        85 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~ltg~~~~a~e  163 (251)
T TIGR03189        85 MLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLLYSGRSIDGAE  163 (251)
T ss_pred             HHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999987 4578999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|+.+ . .+.++                                                         
T Consensus       164 A~~~Glv~~v~~~~~-~-~a~~~---------------------------------------------------------  184 (251)
T TIGR03189       164 GARIGLANAVAEDPE-N-AALAW---------------------------------------------------------  184 (251)
T ss_pred             HHHCCCcceecCcHH-H-HHHHH---------------------------------------------------------
Confidence            999999999997533 1 11111                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHH-HHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLV-REYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~-~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++++++.||.+++.+|++++.....++++.+. .|...+..++.   ++|++||+++|+++|+
T Consensus       185 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  245 (251)
T TIGR03189       185 ---------FDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMA---THDAVEGLNAFLEKRP  245 (251)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhC---CHhHHHHHHHHHhcCC
Confidence                     258899999999999999999888888888764 77777777787   9999999999999985

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.4e-52  Score=371.19  Aligned_cols=238  Identities=24%  Similarity=0.243  Sum_probs=208.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHH----HHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD----FFRTLYS   76 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~----~~~~~~~   76 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.... .........    ....+.+
T Consensus        15 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   93 (262)
T PRK07509         15 DVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKLLFKRLPGNANLAQR   93 (262)
T ss_pred             EEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhhHhhhhHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875421 111111111    1122345


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.++++||+++
T Consensus        94 ~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~  173 (262)
T PRK07509         94 VSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVF  173 (262)
T ss_pred             HHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCc
Confidence            66678899999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+++++  +.+.+.                                                       
T Consensus       174 ~a~eA~~~Glv~~vv~~--~~~~a~-------------------------------------------------------  196 (262)
T PRK07509        174 SAEEALELGLVTHVSDD--PLAAAL-------------------------------------------------------  196 (262)
T ss_pred             CHHHHHHcCChhhhhch--HHHHHH-------------------------------------------------------
Confidence            99999999999999953  332222                                                       


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  +.++++++.||.+++.+|++++.....++.++++.|.+.+..++.   ++|++||+.+|+++|+
T Consensus       197 ------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---~~d~~e~~~af~ekr~  257 (262)
T PRK07509        197 ------------ALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL---GKNQKIAVKAQMKKRA  257 (262)
T ss_pred             ------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence                        348899999999999999999998888999999999999988887   9999999999999985

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=100.00  E-value=3.1e-52  Score=371.91  Aligned_cols=237  Identities=18%  Similarity=0.225  Sum_probs=204.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... .........+  ....++.
T Consensus        25 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~~~~~--~~~~~~~  101 (273)
T PRK07396         25 KITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDGVPRL--NVLDLQR  101 (273)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhhhhhh--HHHHHHH
Confidence            5899999999999999999999999999999999999999999 6999999999864211 0011111111  1235667


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+
T Consensus       102 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~  181 (273)
T PRK07396        102 LIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQ  181 (273)
T ss_pred             HHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+..                                                         
T Consensus       182 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  204 (273)
T PRK07396        182 EALDMGLVNTVVPLADLEKETVR---------------------------------------------------------  204 (273)
T ss_pred             HHHHcCCcCeecCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|+..||.+++.+|++++.... .++...+.|.+.+...+.   ++|++||+.+|+++|+
T Consensus       205 ----------~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~af~~kr~  263 (273)
T PRK07396        205 ----------WCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEAQEGRNAFNEKRQ  263 (273)
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhCCCC
Confidence                      3899999999999999999987644 455555577777777777   9999999999999985

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.9e-52  Score=376.27  Aligned_cols=240  Identities=23%  Similarity=0.280  Sum_probs=204.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC------------C-hHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG------------K-LEEC   67 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~------------~-~~~~   67 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......            . ....
T Consensus        16 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (296)
T PRK08260         16 TITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSD   95 (296)
T ss_pred             EEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhH
Confidence            58999999999999999999999999999999999999999999999999999874311000            0 0111


Q ss_pred             HHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HH
Q 021410           68 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  146 (312)
Q Consensus        68 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~  146 (312)
                      ..+......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++
T Consensus        96 ~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~  175 (296)
T PRK08260         96 DGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTAL  175 (296)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHH
Confidence            22333345677889999999999999999999999999999999999999999999999999999999999999999 99


Q ss_pred             HHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCC
Q 021410          147 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  226 (312)
Q Consensus       147 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (312)
                      +|++||++++|+||+++||||+|+|++++...+.                                              
T Consensus       176 ~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~----------------------------------------------  209 (296)
T PRK08260        176 EWVYSGRVFDAQEALDGGLVRSVHPPDELLPAAR----------------------------------------------  209 (296)
T ss_pred             HHHHcCCccCHHHHHHCCCceeecCHHHHHHHHH----------------------------------------------
Confidence            9999999999999999999999999877654333                                              


Q ss_pred             HHHHHHHHHcccCCCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 021410          227 VEEIIDSLESEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRF--QTFDECLVREYRMSLQGVSRLISGDFYEVS  303 (312)
Q Consensus       227 ~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~--~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~  303 (312)
                                           +.+++|+.+ +|.+++.+|++++....  ..+. ....|...+..++.   ++|++||+
T Consensus       210 ---------------------~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~~~---~~d~~egi  264 (296)
T PRK08260        210 ---------------------ALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSRGR---SGDGKEGV  264 (296)
T ss_pred             ---------------------HHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHHcc---ChhHHHHH
Confidence                                 237888885 99999999999987643  2334 34567777777776   99999999


Q ss_pred             heeeccCC
Q 021410          304 NFQILNKH  311 (312)
Q Consensus       304 ~a~l~~r~  311 (312)
                      .+|+++|+
T Consensus       265 ~af~~kr~  272 (296)
T PRK08260        265 SSFLEKRP  272 (296)
T ss_pred             HHHhcCCC
Confidence            99999885

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.1e-52  Score=367.98  Aligned_cols=238  Identities=23%  Similarity=0.233  Sum_probs=210.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... ....+....+...+.+++..
T Consensus        18 ~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   96 (260)
T PRK07827         18 TLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAAVARAREMTALLRA   96 (260)
T ss_pred             EEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321 01111222345556778888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM  160 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA  160 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++++++..+++++++|+.++|+||
T Consensus        97 l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~l~l~g~~~~a~eA  176 (260)
T PRK07827         97 IVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAARYYLTGEKFGAAEA  176 (260)
T ss_pred             HHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHHHHHhCCccCHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999876559999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +++||||++++  ++++.+.                                                            
T Consensus       177 ~~~Glv~~v~~--~l~~~a~------------------------------------------------------------  194 (260)
T PRK07827        177 ARIGLVTAAAD--DVDAAVA------------------------------------------------------------  194 (260)
T ss_pred             HHcCCcccchH--HHHHHHH------------------------------------------------------------
Confidence            99999999974  3443333                                                            


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                             +.++++++.||.+++.+|++++......+++.++.|...+..++.   ++|++||+++|+++|.
T Consensus       195 -------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~af~~kr~  255 (260)
T PRK07827        195 -------ALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV---SDEAREGMTAFLQKRP  255 (260)
T ss_pred             -------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---ChhHHHHHHHHhcCCC
Confidence                   347899999999999999999998888999999999999888887   9999999999999885

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=100.00  E-value=3.4e-52  Score=369.33  Aligned_cols=235  Identities=18%  Similarity=0.228  Sum_probs=207.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-C-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||. | ++||+|+|++++....  .+   ...+...++.++
T Consensus        16 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--~~---~~~~~~~~~~l~   89 (261)
T PRK11423         16 TITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--RD---PLSYDDPLRQIL   89 (261)
T ss_pred             EEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc--cc---HHHHHHHHHHHH
Confidence            58999999999999999999999999999988 999999996 3 8999999999874321  11   123344556788


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      ..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.+++++|++++|
T Consensus        90 ~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a  169 (261)
T PRK11423         90 RMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITA  169 (261)
T ss_pred             HHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCH
Confidence            889999999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++||||+|+|++++++.+.                                                         
T Consensus       170 ~eA~~~GLv~~vv~~~~l~~~a~---------------------------------------------------------  192 (261)
T PRK11423        170 QRALAVGILNHVVEVEELEDFTL---------------------------------------------------------  192 (261)
T ss_pred             HHHHHcCCcCcccCHHHHHHHHH---------------------------------------------------------
Confidence            99999999999999877764443                                                         


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCH-HHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTF-DECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l-~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++++|++.||.+++.+|++++.... ..+ .+.++.|.+....++.   ++|++||+.+|+++|.
T Consensus       193 ----------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~d~~eg~~af~~kr~  255 (261)
T PRK11423        193 ----------QMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD---SEDYQEGMNAFLEKRK  255 (261)
T ss_pred             ----------HHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC---ChhHHHHHHHHhccCC
Confidence                      34899999999999999999986543 344 6888888888888887   9999999999999985

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=100.00  E-value=2.6e-52  Score=372.71  Aligned_cols=238  Identities=19%  Similarity=0.229  Sum_probs=209.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC--CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g--~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||+ .|++|.+|+.+|.+++++++.|+++|+|||||.|  ++||+|.|++++...  ....+....+......++
T Consensus        24 ~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~  100 (278)
T PLN03214         24 VVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP--KTSAARYAEFWLTQTTFL  100 (278)
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc--ccchHHHHHHHHHHHHHH
Confidence            58999985 6999999999999999999999999999999997  699999999987531  111112223333345577


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccc-cCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~-~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      ..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|+++++++++|.. +++|++||+.++
T Consensus       101 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~  180 (278)
T PLN03214        101 VRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVR  180 (278)
T ss_pred             HHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccC
Confidence            7899999999999999999999999999999999999999999999999 59999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+|+|++++.+.+.                                                        
T Consensus       181 a~eA~~~Glv~~vv~~~~l~~~a~--------------------------------------------------------  204 (278)
T PLN03214        181 PAEAKQLGLIDEVVPAAALMEAAA--------------------------------------------------------  204 (278)
T ss_pred             HHHHHHcCCCcEecChHHHHHHHH--------------------------------------------------------
Confidence            999999999999999877654333                                                        


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +.+++|++.||.+++.+|++++.....+++++++.|.+.+...+.   ++|++||+++|+++.+
T Consensus       205 -----------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~egi~aflek~~  265 (278)
T PLN03214        205 -----------SAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLS---EPSIIKALGGVMERLS  265 (278)
T ss_pred             -----------HHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHh
Confidence                       347899999999999999999988888899999999998888887   9999999999998754

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2e-51  Score=360.75  Aligned_cols=225  Identities=22%  Similarity=0.317  Sum_probs=201.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|+++...         ...+...++.++..
T Consensus        12 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~~~~~~~~~~~   81 (243)
T PRK07854         12 TIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDFPDALIEMLHA   81 (243)
T ss_pred             EEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHHHHHHHHHHHH
Confidence            5899999999999999999999999999865 8999999999999999999985211         11233445667888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||++++|+|
T Consensus        82 l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~e  161 (243)
T PRK07854         82 IDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQ  161 (243)
T ss_pred             HHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|++   ++ .+.                                                           
T Consensus       162 A~~~Glv~~v~~---~~-~a~-----------------------------------------------------------  178 (243)
T PRK07854        162 ALATGMANRIGT---LA-DAQ-----------------------------------------------------------  178 (243)
T ss_pred             HHHCCCcccccC---HH-HHH-----------------------------------------------------------
Confidence            999999999964   22 122                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|++++..  .+++++++.|...+..++.   ++|++||+++|+++|.
T Consensus       179 --------~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---~~d~~eg~~af~~kr~  237 (243)
T PRK07854        179 --------AWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA---SQDAIEAQVARIEKRP  237 (243)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc---CchHHHHHHHHhCCCC
Confidence                    237899999999999999999875  6799999999998888887   9999999999999885

>PLN02921 naphthoate synthase

Probab=100.00  E-value=2.7e-51  Score=372.15  Aligned_cols=237  Identities=18%  Similarity=0.221  Sum_probs=201.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... .........+  ....++.
T Consensus        79 ~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~~~~~~~~--~~~~l~~  155 (327)
T PLN02921         79 KITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVGPDDAGRL--NVLDLQI  155 (327)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccchhHHHHH--HHHHHHH
Confidence            5899999999999999999999999999999999999999999 8999999999764210 0111111111  1234667


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+++|+.++|+
T Consensus       156 ~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~  235 (327)
T PLN02921        156 QIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTAS  235 (327)
T ss_pred             HHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHH
Confidence            88899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       236 eA~~~GLV~~vv~~~~l~~~a~~---------------------------------------------------------  258 (327)
T PLN02921        236 EALKMGLVNTVVPLDELEGETVK---------------------------------------------------------  258 (327)
T ss_pred             HHHHCCCceEEeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|++++..... .....+.|...+..++.   ++|++||+.+|+++|+
T Consensus       259 ----------~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~---s~d~~egi~Af~ekr~  317 (327)
T PLN02921        259 ----------WCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYG---SEEGNEGRTAYLEGRA  317 (327)
T ss_pred             ----------HHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhc---CHHHHHHHHHHhccCC
Confidence                      38999999999999999999876543 33333344466666666   9999999999999985

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=3.7e-51  Score=360.43  Aligned_cols=229  Identities=21%  Similarity=0.251  Sum_probs=207.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.... .+  .  ..+..  ..++..
T Consensus        17 ~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~--~--~~~~~--~~~~~~   89 (249)
T PRK07110         17 QVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ-TG--K--GTFTE--ANLYSL   89 (249)
T ss_pred             EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc-ch--h--hhHhh--HHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321 11  1  11221  467788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +.++++||++++++|
T Consensus        90 l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~e  169 (249)
T PRK07110         90 ALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYRGAE  169 (249)
T ss_pred             HHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+..                                                          
T Consensus       170 A~~~Glv~~vv~~~~l~~~a~~----------------------------------------------------------  191 (249)
T PRK07110        170 LKKRGVPFPVLPRAEVLEKALE----------------------------------------------------------  191 (249)
T ss_pred             HHHcCCCeEEeChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877644332                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ  306 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~  306 (312)
                               .++++++.||.+++.+|+.++......+++.++.|...+...+.   ++|++||+++.
T Consensus       192 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~egi~~~  246 (249)
T PRK07110        192 ---------LARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH---QPEVKRRIESL  246 (249)
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHhHHHHHHHh
Confidence                     37999999999999999999999889999999999999999998   99999999864

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.1e-51  Score=368.95  Aligned_cols=237  Identities=20%  Similarity=0.227  Sum_probs=199.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHH-H---hh-ccCChHHHHHH---HH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLY-H---FM-NQGKLEECKDF---FR   72 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~-~---~~-~~~~~~~~~~~---~~   72 (312)
                      +||||||+++|+||.+|+.+|.+++++++.|++||+|||||.|++||+|+|+++.. .   .. ..........+   ..
T Consensus        17 ~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (298)
T PRK12478         17 TITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTA   96 (298)
T ss_pred             EEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhh
Confidence            58999999999999999999999999999999999999999999999999998621 1   00 00000011111   01


Q ss_pred             H---HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcc-cccCCCchHHHhhhcChHH-HHH
Q 021410           73 T---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFYLSHLPGHL-GEF  147 (312)
Q Consensus        73 ~---~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~-G~~p~~g~~~~l~r~~g~~-a~~  147 (312)
                      .   ....+..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++|  ++++ + +++|.. +++
T Consensus        97 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~-~-~~vG~~~A~~  172 (298)
T PRK12478         97 RETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW-L-YRLSLAKVKW  172 (298)
T ss_pred             hhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-H-HHhhHHHHHH
Confidence            1   1234566889999999999999999999999999999999999999999997 8875  3343 2 458998 999


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCH
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV  227 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      |++||++|+|+||+++||||+|||++++++.+.++                                             
T Consensus       173 llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~---------------------------------------------  207 (298)
T PRK12478        173 HSLTGRPLTGVQAAEAELINEAVPFERLEARVAEV---------------------------------------------  207 (298)
T ss_pred             HHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHH---------------------------------------------
Confidence            99999999999999999999999988887554433                                             


Q ss_pred             HHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhhhcCCCCChh------
Q 021410          228 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGVSRLISGDFY------  300 (312)
Q Consensus       228 ~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~~~d~~------  300 (312)
                                            +++|+..||.+++.+|++++.... .+++++++.|...+..++.   ++|++      
T Consensus       208 ----------------------a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~e~~~~~  262 (298)
T PRK12478        208 ----------------------ATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN---TPDALEFIRTA  262 (298)
T ss_pred             ----------------------HHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc---ChhHHHHHHHH
Confidence                                  789999999999999999998766 4699999999999988887   99997      


Q ss_pred             --hhhheeeccCC
Q 021410          301 --EVSNFQILNKH  311 (312)
Q Consensus       301 --eg~~a~l~~r~  311 (312)
                        ||++||++||+
T Consensus       263 ~~egv~Af~ekR~  275 (298)
T PRK12478        263 ETQGVRAAVERRD  275 (298)
T ss_pred             HHHHHHHHHHhcC
Confidence              59999999986

>PRK08321 naphthoate synthase; Validated

Probab=100.00  E-value=8.2e-51  Score=367.15  Aligned_cols=240  Identities=17%  Similarity=0.185  Sum_probs=202.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-------CceeccCCchhHHHhh---ccCCh-H--HH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHFM---NQGKL-E--EC   67 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-------~~F~aG~Dl~~~~~~~---~~~~~-~--~~   67 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++++|||||.|       ++||+|+|++++....   ...+. .  ..
T Consensus        37 ~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~  116 (302)
T PRK08321         37 RIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDP  116 (302)
T ss_pred             EEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccchhh
Confidence            5899999999999999999999999999999999999999998       5999999999753210   00000 0  00


Q ss_pred             HHHH-HHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-
Q 021410           68 KDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-  144 (312)
Q Consensus        68 ~~~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-  144 (312)
                      .... .....+...+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|.. 
T Consensus       117 ~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~  196 (302)
T PRK08321        117 ARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKF  196 (302)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHH
Confidence            0111 112345667889999999999999999999999999999999 6999999999999999999999999999999 


Q ss_pred             HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC
Q 021410          145 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL  224 (312)
Q Consensus       145 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (312)
                      +++|++||+.++|+||+++||||++||++++.+.+.+                                           
T Consensus       197 A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~-------------------------------------------  233 (302)
T PRK08321        197 AREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEALE-------------------------------------------  233 (302)
T ss_pred             HHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHHH-------------------------------------------
Confidence            9999999999999999999999999998887654443                                           


Q ss_pred             CCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 021410          225 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN  304 (312)
Q Consensus       225 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~  304 (312)
                                              ++++|++.||.+++.+|++++.... .+.+....|.+.+..++.   ++|++||+.
T Consensus       234 ------------------------~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---~~d~~egi~  285 (302)
T PRK08321        234 ------------------------WAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAYM---TDEAQEGRD  285 (302)
T ss_pred             ------------------------HHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence                                    3899999999999999999987654 344445568888877777   999999999


Q ss_pred             eeeccCC
Q 021410          305 FQILNKH  311 (312)
Q Consensus       305 a~l~~r~  311 (312)
                      +|+++|+
T Consensus       286 af~ekr~  292 (302)
T PRK08321        286 AFLEKRD  292 (302)
T ss_pred             HHhccCC
Confidence            9999985

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-50  Score=357.28  Aligned_cols=219  Identities=22%  Similarity=0.264  Sum_probs=197.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....    .....  ...++.++..
T Consensus        16 ~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~--~~~~~~~~~~   89 (258)
T PRK06190         16 TLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDG----SAYGA--QDALPNPSPA   89 (258)
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhccc----chhhH--HHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321    11111  2234567788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.++++||++++|+|
T Consensus        90 i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~e  169 (258)
T PRK06190         90 WPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAAD  169 (258)
T ss_pred             HHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.+                                                          
T Consensus       170 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  191 (258)
T PRK06190        170 ALRAGLVTEVVPHDELLPRARR----------------------------------------------------------  191 (258)
T ss_pred             HHHcCCCeEecCHhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998877654433                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS  292 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~  292 (312)
                               .+++|++.||.+++.+|++++.....++++.++.|...+...+.
T Consensus       192 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~  235 (258)
T PRK06190        192 ---------LAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNR  235 (258)
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHc
Confidence                     38899999999999999999998888999999999999988886

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=2.7e-50  Score=356.17  Aligned_cols=233  Identities=16%  Similarity=0.174  Sum_probs=201.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++  +++|+|||+|.|++||+|+|++++.....  ...........++.++..
T Consensus        16 ~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~--~~~~~~~~~~~~~~~~~~   91 (255)
T PRK07112         16 FLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPD--AGRADLIDAEPLYDLWHR   91 (255)
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccc--cchhhhhhHHHHHHHHHH
Confidence            58999999999999999999999999998  35999999999999999999998754211  111111122334567888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. +++++++|+.++|+|
T Consensus        92 l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~e  170 (255)
T PRK07112         92 LATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQ  170 (255)
T ss_pred             HHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHH
Confidence            9999999999999999999999999999999999999999999999999865 56799999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|+++.  ...                                                           
T Consensus       171 A~~~Glv~~vv~~~~~--~~~-----------------------------------------------------------  189 (255)
T PRK07112        171 AFSWGLVDAYGANSDT--LLR-----------------------------------------------------------  189 (255)
T ss_pred             HHHcCCCceecCcHHH--HHH-----------------------------------------------------------
Confidence            9999999999986542  122                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.++++++.||.+++.+|++++.. ...+.+.++.|......++.   ++|++||+.+|+++|+
T Consensus       190 --------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~---~~~~~eg~~af~~kr~  249 (255)
T PRK07112        190 --------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA---DPENLRKIARYVETGK  249 (255)
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc---ChHHHHHHHHHHcCCC
Confidence                    237899999999999999999865 55789999999998888887   9999999999999885

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=100.00  E-value=7e-49  Score=375.21  Aligned_cols=237  Identities=14%  Similarity=0.056  Sum_probs=210.0

Q ss_pred             CEEecCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEEeCCCc-eeccCCchhHHHhhccCChH
Q 021410            1 MAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQGKLE   65 (312)
Q Consensus         1 ~itln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~~~   65 (312)
                      +||||||++.             |+|+.+|+.+|.+++.+++. |+++|+|||||.|+. ||+|+|++.+.    ..+..
T Consensus       270 ~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~----~~~~~  345 (546)
T TIGR03222       270 TITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEA----HKDHW  345 (546)
T ss_pred             EEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCccccc----cccch
Confidence            5899999999             99999999999999999984 599999999999987 99999998421    11111


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCcEEEEE-ccceeccc-ceeecCCCeEEE-------eCceeEecCCCcccccCCCchHHH
Q 021410           66 ECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIGFHPDAGASFY  136 (312)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~~kp~Iaav-~G~a~GgG-~~lal~~D~~ia-------~~~a~f~~pe~~~G~~p~~g~~~~  136 (312)
                      .........++++..|..+||||||+| ||+|+||| ++|+++||+|||       +++++|++||+++|++|++|++++
T Consensus       346 ~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~  425 (546)
T TIGR03222       346 FVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSR  425 (546)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHH
Confidence            112222334557788999999999999 89999999 999999999999       899999999999999999999999


Q ss_pred             hhhcC-hHH-H--HHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhh
Q 021410          137 LSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI  212 (312)
Q Consensus       137 l~r~~-g~~-a--~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (312)
                      |++++ |.. +  .++++||+.|+|+||+++|||++++|++++.+.+.+                               
T Consensus       426 L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~-------------------------------  474 (546)
T TIGR03222       426 LATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIRI-------------------------------  474 (546)
T ss_pred             HHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHHH-------------------------------
Confidence            99998 887 7  569999999999999999999999998887654443                               


Q ss_pred             hHHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhh
Q 021410          213 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGV  291 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~  291 (312)
                                                          ++++|++.||.+++.+|++++.....+++++ +.+|...+..++
T Consensus       475 ------------------------------------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~  518 (546)
T TIGR03222       475 ------------------------------------ALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIF  518 (546)
T ss_pred             ------------------------------------HHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHh
Confidence                                                3899999999999999999999999999999 999999999999


Q ss_pred             hcCCCCChhh---hhheeeccCC
Q 021410          292 SRLISGDFYE---VSNFQILNKH  311 (312)
Q Consensus       292 ~~~~~~d~~e---g~~a~l~~r~  311 (312)
                      .   ++|.+|   |+++|++||+
T Consensus       519 ~---~~d~~e~~~g~~af~ekr~  538 (546)
T TIGR03222       519 N---RPNAVGENGALKVYGSGKK  538 (546)
T ss_pred             c---CCcccchhhHHHHHccCCC
Confidence            8   999999   9999999996

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>PRK05869 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.8e-48  Score=337.19  Aligned_cols=200  Identities=21%  Similarity=0.310  Sum_probs=178.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++ |++|++|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....    ......+...+.+++.+
T Consensus        20 ~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----~~~~~~~~~~~~~~~~~   94 (222)
T PRK05869         20 TLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS----AQEADTAARVRQQAVDA   94 (222)
T ss_pred             EEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC----hhhHHHHHHHHHHHHHH
Confidence            589999985 9999999999999999999999999999999999999999999875321    11222233445678889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. ++++++||++++|+|
T Consensus        95 i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~e  174 (222)
T PRK05869         95 VAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEE  174 (222)
T ss_pred             HHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+++|++++.+.+.                                                           
T Consensus       175 A~~~Glv~~vv~~~~l~~~a~-----------------------------------------------------------  195 (222)
T PRK05869        175 ALALGLIDEMVAPDDVYDAAA-----------------------------------------------------------  195 (222)
T ss_pred             HHHCCCCCEeeCchHHHHHHH-----------------------------------------------------------
Confidence            999999999999887764443                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhh
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGR  272 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~  272 (312)
                              +.+++|+..||.+++.+|++++...
T Consensus       196 --------~~a~~ia~~~~~a~~~~K~~~~~~~  220 (222)
T PRK05869        196 --------AWARRFLDGPPHALAAAKAGISDVY  220 (222)
T ss_pred             --------HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence                    3488999999999999999998654

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=100.00  E-value=2.6e-48  Score=386.38  Aligned_cols=277  Identities=18%  Similarity=0.228  Sum_probs=217.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ..+......+....+.++..
T Consensus        19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   97 (715)
T PRK11730         19 ELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLF-AAPEEELSQWLHFANSIFNR   97 (715)
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhc-cCCHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321 11222334455566778888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++++|+|
T Consensus        98 i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~e  177 (715)
T PRK11730         98 LEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAED  177 (715)
T ss_pred             HHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHh-hhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          160 MMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      |+++||||+++|++++.+.+.+++ +++..+.. ...    ...   +......         .+.......++      
T Consensus       178 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~-~~~----~~~---~~~~p~a---------~~~~~~~~~~~------  234 (715)
T PRK11730        178 ALKVGAVDAVVAPEKLQEAALALLKQAIAGKLD-WKA----RRQ---PKLEPLK---------LSKIEAMMSFT------  234 (715)
T ss_pred             HHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCc-ccc----ccC---ccccccc---------ccchhHHHHHH------
Confidence            999999999999988877666663 33322100 000    000   0000000         00000000000      


Q ss_pred             CCCCchHHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~-~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                            .+.+ +.++..+..|.++ .++++++.+...+++++++.|.+.+..++.   |+|++||+++|+++|.
T Consensus       235 ------~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~d~~egi~aF~~~~~  298 (715)
T PRK11730        235 ------TAKGMVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAK---TNVARALVGIFLNDQY  298 (715)
T ss_pred             ------HHHHHHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence                  1111 1244566677777 588899998888999999999999999998   9999999999998863

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=100.00  E-value=2.5e-48  Score=372.64  Aligned_cols=237  Identities=14%  Similarity=0.045  Sum_probs=209.2

Q ss_pred             CEEecCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEEeCC-CceeccCCchhHHHhhccCChH
Q 021410            1 MAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE   65 (312)
Q Consensus         1 ~itln~p~~~-------------Nal~~~~~~~L~~~l~~~~~-d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~   65 (312)
                      +||||||+++             |+||.+|+.+|.+++++++. |+++|+|||||.| ++||+|+|++.+. .   .+..
T Consensus       274 ~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~-~---~~~~  349 (550)
T PRK08184        274 TITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA-H---KDHW  349 (550)
T ss_pred             EEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc-c---cchH
Confidence            5899999988             68999999999999999996 7999999999999 5999999987321 1   1111


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCcEEEEEc-cceeccc-ceeecCCCeEEEe-------CceeEecCCCcccccCCCchHHH
Q 021410           66 ECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATPETLIGFHPDAGASFY  136 (312)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~-G~a~GgG-~~lal~~D~~ia~-------~~a~f~~pe~~~G~~p~~g~~~~  136 (312)
                      .........+.++..+..+||||||+|| |+|+||| ++|+++||+|||+       ++++|++||+++|++|++|++++
T Consensus       350 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~  429 (550)
T PRK08184        350 LVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSR  429 (550)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHH
Confidence            1122233445677889999999999997 9999999 9999999999999       99999999999999999999999


Q ss_pred             hhhc-ChHH-HHHH--HhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhh
Q 021410          137 LSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI  212 (312)
Q Consensus       137 l~r~-~g~~-a~~l--~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (312)
                      |+|+ +|.. ++++  ++||++|+|+||+++||||+++|++++++.+..+                              
T Consensus       430 L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~------------------------------  479 (550)
T PRK08184        430 LARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIA------------------------------  479 (550)
T ss_pred             hHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHH------------------------------
Confidence            9988 6998 8886  5899999999999999999999998887544433                              


Q ss_pred             hHHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHhh
Q 021410          213 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDEC-LVREYRMSLQGV  291 (312)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~  291 (312)
                                                           +++|++.||.+++.+|++++.....+++++ +.+|.+.+..++
T Consensus       480 -------------------------------------a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~  522 (550)
T PRK08184        480 -------------------------------------LEERASLSPDALTGMEANLRFAGPETMETRIFGRLTAWQNWIF  522 (550)
T ss_pred             -------------------------------------HHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence                                                 899999999999999999999999999999 999999999988


Q ss_pred             hcCCCCChhh---hhheeeccCC
Q 021410          292 SRLISGDFYE---VSNFQILNKH  311 (312)
Q Consensus       292 ~~~~~~d~~e---g~~a~l~~r~  311 (312)
                      .   ++|.+|   |+++|++||+
T Consensus       523 ~---~~d~~e~~~g~~af~ekr~  542 (550)
T PRK08184        523 Q---RPNAVGEKGALKVYGTGQK  542 (550)
T ss_pred             c---CCcccccchHHHHhccCCC
Confidence            8   999999   9999999986

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=100.00  E-value=3e-47  Score=342.68  Aligned_cols=272  Identities=17%  Similarity=0.239  Sum_probs=213.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ........+...+++++.
T Consensus        40 ~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l~~  118 (360)
T TIGR03200        40 WIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDMVS  118 (360)
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999 69999999998754321 112233445555567888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||++++|+
T Consensus       119 ~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~  198 (360)
T TIGR03200       119 AILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAH  198 (360)
T ss_pred             HHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCCh------------hHHHHHHhhhhcCCH---HHHHHHHHHhccccCCCcchhhhHHHHHHhhcC
Q 021410          159 EMMACGLATHYSVSEKL------------PLIEEELGKLVTDDP---SVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG  223 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (312)
                      ||+++||||+++|+.++            ++..+.+.++...++   ..++..|..+......                 
T Consensus       199 EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-----------------  261 (360)
T TIGR03200       199 KAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTID-----------------  261 (360)
T ss_pred             HHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccch-----------------
Confidence            99999999999998887            445555544433322   2455555554432111                 


Q ss_pred             CCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhh
Q 021410          224 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVS  303 (312)
Q Consensus       224 ~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~  303 (312)
                         ...+-+.            -.++..++....|.++.-+++-+|......+...-..-...+..-+    ..+..+|+
T Consensus       262 ---~~~l~~~------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  322 (360)
T TIGR03200       262 ---LSLLDEA------------VEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM----MNEARTGF  322 (360)
T ss_pred             ---HhHHHHH------------HHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc----ccccchhh
Confidence               0111111            1124667888889999999999987776665555444444443333    57889999


Q ss_pred             heeecc
Q 021410          304 NFQILN  309 (312)
Q Consensus       304 ~a~l~~  309 (312)
                      +||-++
T Consensus       323 ~~~~~~  328 (360)
T TIGR03200       323 RAFNEG  328 (360)
T ss_pred             HHHhcc
Confidence            999984

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-47  Score=343.92  Aligned_cols=222  Identities=22%  Similarity=0.287  Sum_probs=189.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-c----------------CC
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q----------------GK   63 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~----------------~~   63 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..... .                ..
T Consensus        16 ~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (288)
T PRK08290         16 RITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPG   95 (288)
T ss_pred             EEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999999999999999999997632110 0                00


Q ss_pred             -hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh
Q 021410           64 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  142 (312)
Q Consensus        64 -~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g  142 (312)
                       ..........+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+ ++++++++++|
T Consensus        96 ~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG  173 (288)
T PRK08290         96 VEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELG  173 (288)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhh
Confidence             0011112233455667888999999999999999999999999999999999999999999998 44 45677899999


Q ss_pred             HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhh
Q 021410          143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC  221 (312)
Q Consensus       143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (312)
                      .. +++|++||+.|+|+||+++||||++||++++.+.+.+                                        
T Consensus       174 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~----------------------------------------  213 (288)
T PRK08290        174 PRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETLE----------------------------------------  213 (288)
T ss_pred             HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHH----------------------------------------
Confidence            99 9999999999999999999999999998877654443                                        


Q ss_pred             cCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHHHhh
Q 021410          222 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSLQGV  291 (312)
Q Consensus       222 ~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~~~~  291 (312)
                                                 .+++|++.||.+++.+|++++..... +++++++.|.......+
T Consensus       214 ---------------------------~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (288)
T PRK08290        214 ---------------------------LARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGH  257 (288)
T ss_pred             ---------------------------HHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHcc
Confidence                                       38999999999999999999988765 79999999999988776

>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=1.4e-48  Score=319.29  Aligned_cols=241  Identities=21%  Similarity=0.263  Sum_probs=221.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +|-+|||.+.|+++.-|+.+|.++++++..|+.+|+|+|++.- +.||+|+||++-...    .+.+...|...++.++.
T Consensus        43 vl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M----s~~Ev~~fV~~lR~~~~  118 (291)
T KOG1679|consen   43 ILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM----SPSEVTRFVNGLRGLFN  118 (291)
T ss_pred             EEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----CHHHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999999975 999999999986543    36788889999999999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++|.||||+|+|.++|||++++++||+|+|+.+++|+++|++++++|+.|++++|+|++|.. ++++++||+.+++.
T Consensus       119 dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~  198 (291)
T KOG1679|consen  119 DIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGA  198 (291)
T ss_pred             HHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHhHhhhheeccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||...||||++|...+-.+.+.                                                          
T Consensus       199 eA~~lGlVnhvv~qneegdaa~----------------------------------------------------------  220 (291)
T KOG1679|consen  199 EAAKLGLVNHVVEQNEEGDAAY----------------------------------------------------------  220 (291)
T ss_pred             hHHhcchHHHHHhcCccccHHH----------------------------------------------------------
Confidence            9999999999997665332221                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                           +-+.+++++|.-+.|.++++.|..++.+...++..++..|.....+.+.   +.|..||+.+|-+||.
T Consensus       221 -----~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~---t~drLeglaaf~ekr~  285 (291)
T KOG1679|consen  221 -----QKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIP---TKDRLEGLAAFKEKRK  285 (291)
T ss_pred             -----HHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCc---HHHHHHHHHHHHhhcC
Confidence                 1123568999999999999999999999999999999999999999988   9999999999999985

>PRK08788 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=9e-47  Score=336.72  Aligned_cols=236  Identities=16%  Similarity=0.175  Sum_probs=189.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL   74 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~-----d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~   74 (312)
                      +|||| |+++|++|.+|+.+|.+++++++.     |+++|+|||+|. |++||+|+|++++.......+.+....+...+
T Consensus        29 ~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~  107 (287)
T PRK08788         29 WMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGDRDALLAYARAC  107 (287)
T ss_pred             EEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHH
Confidence            58996 999999999999999999999998     899999999999 79999999999875321111112112222222


Q ss_pred             HHHHHHHh---hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHh
Q 021410           75 YSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL  150 (312)
Q Consensus        75 ~~~~~~l~---~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~l  150 (312)
                      ...+..+.   .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. +++|++
T Consensus       108 ~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~elll  187 (287)
T PRK08788        108 VDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELIL  187 (287)
T ss_pred             HHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHH
Confidence            33333333   79999999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             cCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHH
Q 021410          151 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI  230 (312)
Q Consensus       151 tg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (312)
                      ||+.++|+||+++||||+++|++++.+.+.+                                                 
T Consensus       188 tG~~l~A~eA~~~GLV~~vv~~~el~~~a~~-------------------------------------------------  218 (287)
T PRK08788        188 SGKLYTAEELHDMGLVDVLVEDGQGEAAVRT-------------------------------------------------  218 (287)
T ss_pred             cCCCCCHHHHHHCCCCcEecCchHHHHHHHH-------------------------------------------------
Confidence            9999999999999999999998887654443                                                 


Q ss_pred             HHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee
Q 021410          231 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI  307 (312)
Q Consensus       231 ~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l  307 (312)
                                        ++++|+.. |.+....|+..+.....++++.++.|......+.+  ..+.-++-|..|.
T Consensus       219 ------------------~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  274 (287)
T PRK08788        219 ------------------FIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ--LEEKDLRTMERLV  274 (287)
T ss_pred             ------------------HHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh--cccccHHHHHHHH
Confidence                              36778876 77777777776666667889999988777665554  1344455565554

>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-47  Score=316.71  Aligned_cols=241  Identities=22%  Similarity=0.322  Sum_probs=212.1

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc---cC-----ChHHHHHHHHH
Q 021410            2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN---QG-----KLEECKDFFRT   73 (312)
Q Consensus         2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~---~~-----~~~~~~~~~~~   73 (312)
                      +.||||.|.|++|..|+.|+.++++.+..||++|+|||+|+|++||+|.|+..+.....   ++     .....+++...
T Consensus        35 v~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~lrr~Ik~  114 (292)
T KOG1681|consen   35 VQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSLRRIIKR  114 (292)
T ss_pred             EEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHHHHHHHH
Confidence            67999999999999999999999999999999999999999999999999887654311   11     12234556677


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH--HHHHHhc
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--GEFLALT  151 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~--a~~l~lt  151 (312)
                      +++.+..|.+||||||++|||+|+|+|+.|..+||+|+|+++|.|..-|+.+|+..+.|...+||+.+|..  ++++.+|
T Consensus       115 ~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafT  194 (292)
T KOG1681|consen  115 YQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFT  194 (292)
T ss_pred             HHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhh
Confidence            78889999999999999999999999999999999999999999999999999999999999999999965  9999999


Q ss_pred             CCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410          152 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII  231 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (312)
                      ++.++|.||++.|||++|+|+.+... ...                                                  
T Consensus       195 ar~f~a~EAl~~GLvSrvf~dk~~ll-~~~--------------------------------------------------  223 (292)
T KOG1681|consen  195 ARKFSADEALDSGLVSRVFPDKEELL-NGA--------------------------------------------------  223 (292)
T ss_pred             hhhcchhhhhhcCcchhhcCCHHHHH-hhh--------------------------------------------------
Confidence            99999999999999999998754221 111                                                  


Q ss_pred             HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                     ..+++.|+.+||.++..||+.|+++...+.++.|..=..+....+.   |+|+.+++.+.++|++
T Consensus       224 ---------------l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~---s~Dl~~av~a~m~k~k  285 (292)
T KOG1681|consen  224 ---------------LPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL---SDDLVKAVMAQMEKLK  285 (292)
T ss_pred             ---------------HHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH---HHHHHHHHHHHhhcCC
Confidence                           1358999999999999999999999999999999988777766665   9999999999998764

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=100.00  E-value=5.1e-46  Score=369.11  Aligned_cols=270  Identities=19%  Similarity=0.222  Sum_probs=213.3

Q ss_pred             CEEecCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEE-EeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +|||||| ++.|++|.+|+.+|.++++.++.|+++|+||| +|.|++||+|+|++++...   .+......+....+.++
T Consensus        13 ~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~   89 (699)
T TIGR02440        13 ILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKALAQQGQVLF   89 (699)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHHHHHHHHHH
Confidence            5899999 69999999999999999999999999999986 6788999999999987531   11223334455566788


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++  ++|++||+++|++|++|++++|+|++|.. +++|++||+.+
T Consensus        90 ~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~  169 (699)
T TIGR02440        90 AELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL  169 (699)
T ss_pred             HHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcC
Confidence            8899999999999999999999999999999999986  79999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcC--CCCHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG--LDTVEEIIDS  233 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  233 (312)
                      +|+||+++||||+++|++++.+.+.++++.....++              +.  ..      .....+  ......+.  
T Consensus       170 ~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~--------------~~--~~------~~~~~~~~~~a~~~~~--  225 (699)
T TIGR02440       170 RAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRK--------------PL--SL------QERLLEGTPLGRALLF--  225 (699)
T ss_pred             CHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCC--------------Cc--cc------hhhhcccCchhHHHHH--
Confidence            999999999999999998887766666431000000              00  00      000000  00001111  


Q ss_pred             HHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          234 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       234 l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                                +++.+.+++-.+..-.|...+|++++.+...+++++++.|.+.+..++.   |+|+++++++|+.++
T Consensus       226 ----------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~~f~~~~  289 (699)
T TIGR02440       226 ----------DQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVM---TPESAALRSIFFATT  289 (699)
T ss_pred             ----------HHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence                      1112223333444567888899999999999999999999999999998   999999999998754

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.4e-46  Score=337.67  Aligned_cols=203  Identities=21%  Similarity=0.273  Sum_probs=172.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC--C---------------
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--K---------------   63 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~---------------   63 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.......  .               
T Consensus        22 ~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (302)
T PRK08272         22 RITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPD  101 (302)
T ss_pred             EEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccccccccccccccccc
Confidence            58999999999999999999999999999999999999999999999999999875432100  0               


Q ss_pred             --hHHH--HHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh
Q 021410           64 --LEEC--KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH  139 (312)
Q Consensus        64 --~~~~--~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r  139 (312)
                        ....  ..+....++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|.+|+.   ..+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~  178 (302)
T PRK08272        102 DPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAY  178 (302)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHH
Confidence              0000  1223445667788899999999999999999999999999999999999999999998666643   34678


Q ss_pred             cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHH
Q 021410          140 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV  218 (312)
Q Consensus       140 ~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (312)
                      ++|.. +++|++||++|+|+||+++||||+++|++++.+.+.++                                    
T Consensus       179 ~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~l------------------------------------  222 (302)
T PRK08272        179 RLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERL------------------------------------  222 (302)
T ss_pred             HhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHH------------------------------------
Confidence            89999 99999999999999999999999999988876544433                                    


Q ss_pred             HhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc
Q 021410          219 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF  273 (312)
Q Consensus       219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~  273 (312)
                                                     +++|++.||.+++.+|++++....
T Consensus       223 -------------------------------a~~ia~~~~~a~~~~K~~l~~~~~  246 (302)
T PRK08272        223 -------------------------------VERIAAVPVNQLAMVKLAVNSALL  246 (302)
T ss_pred             -------------------------------HHHHHcCCHHHHHHHHHHHHHHHH
Confidence                                           788888999999999999987654

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.6e-46  Score=325.90  Aligned_cols=212  Identities=16%  Similarity=0.136  Sum_probs=186.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.++++.++  +++++||++|.|++||+|+|++++...     .+....+.....+++..
T Consensus        15 ~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~~~~~~~~~l~~~   86 (229)
T PRK06213         15 TITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAIALLTAGSTLARR   86 (229)
T ss_pred             EEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHHHHHHHHHHHHHH
Confidence            58999985 69999999999999999998  457999999999999999999987531     22233455666778888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++.++++++|.. +++++++|++++|+
T Consensus        87 l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~  166 (229)
T PRK06213         87 LLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPE  166 (229)
T ss_pred             HHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHH
Confidence            99999999999999999999999999999999999 99999999999998888888899999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.                                                          
T Consensus       167 eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------  188 (229)
T PRK06213        167 EAVAAGFLDEVVPPEQLLARAQ----------------------------------------------------------  188 (229)
T ss_pred             HHHHCCCceeccChHHHHHHHH----------------------------------------------------------
Confidence            9999999999999887764443                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS  287 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~  287 (312)
                               +.++++++.||.+++.+|++++......+.+.++.|.+.+
T Consensus       189 ---------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~  228 (229)
T PRK06213        189 ---------AAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF  228 (229)
T ss_pred             ---------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence                     3378999999999999999999887788888888887653

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=100.00  E-value=6.1e-46  Score=369.40  Aligned_cols=270  Identities=18%  Similarity=0.221  Sum_probs=212.1

Q ss_pred             CEEecCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p-~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +|||||| ++.|++|.+|+.+|.+++++++.|+++|+|||+|.+ ++||+|+|++++....   ..+....+....+.++
T Consensus        18 ~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~   94 (708)
T PRK11154         18 VITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACK---TAQEAEALARQGQQLF   94 (708)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccC---CHHHHHHHHHHHHHHH
Confidence            5899999 689999999999999999999999999999999975 8999999999875321   1222333445556788


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++  ++|++||+++|++|++|++++|++++|.. +++|++||+++
T Consensus        95 ~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i  174 (708)
T PRK11154         95 AEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQL  174 (708)
T ss_pred             HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcC
Confidence            8999999999999999999999999999999999996  59999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCC--CHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD--TVEEIIDS  233 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  233 (312)
                      +|+||+++||||+++|++++.+.+.++++.....+..+.  +..                    ...+.+  ......  
T Consensus       175 ~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~--~~~--------------------~~~~~~p~~~~~~~--  230 (708)
T PRK11154        175 RAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLP--VRE--------------------RLLEGNPLGRALLF--  230 (708)
T ss_pred             CHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCC--chh--------------------hhcccCchhHHHHH--
Confidence            999999999999999998887666665322100000000  000                    000000  000111  


Q ss_pred             HHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          234 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       234 l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                                +.+.+.+++-.+..-.|+..+|++++.+...+++++++.|.+.+..++.   |+|++|++++|+.+|
T Consensus       231 ----------~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~---s~~~~~~~~aF~~~~  294 (708)
T PRK11154        231 ----------KQARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAM---TPESAALRSIFFATT  294 (708)
T ss_pred             ----------HHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence                      1111122222333446999999999999889999999999999999998   999999999999765

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=100.00  E-value=7e-45  Score=361.07  Aligned_cols=277  Identities=16%  Similarity=0.218  Sum_probs=213.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++..... .+......+....+.++..
T Consensus        19 ~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~   97 (714)
T TIGR02437        19 ELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELIQWLLFANSIFNK   97 (714)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998853211 1122333455556778889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.+|++||++++|+|
T Consensus        98 i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~e  177 (714)
T TIGR02437        98 LEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAED  177 (714)
T ss_pred             HHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhh-hcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      |+++||||+++|++++.+.+.++++. ....+. ..      .... +......  ...+.+++..              
T Consensus       178 A~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~-~~------~~~~-~~~~~~~--~~~~~~~~~~--------------  233 (714)
T TIGR02437       178 ALKVGAVDAVVTADKLGAAALQLLKDAINGKLD-WK------AKRQ-PKLEPLK--LSKIEAMMSF--------------  233 (714)
T ss_pred             HHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc-cc------ccCC-CCccccc--ccchHHHHHH--------------
Confidence            99999999999988887666655322 111000 00      0000 0000000  0000111100              


Q ss_pred             CCCCchHHHH-HHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGS-TLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~-~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                           +++.+ ..++-..+.| +...+.+.+..+...+++++++.|.+.|.+++.   |++.+..++.|+.+|.
T Consensus       234 -----~~~~~~~~~~~~~~~p-ap~~~~~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~~l~~~ff~~r~  298 (714)
T TIGR02437       234 -----TTAKGMVAQVAGPHYP-APMTAVKTIEKAARFGRDKALEIEAKGFVKLAK---TSEAKALIGLFLNDQY  298 (714)
T ss_pred             -----HHHHHHHHHhhcCCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhhhHh
Confidence                 11122 2233334444 444466788888888999999999999999998   9999999999998764

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=8.6e-44  Score=300.50  Aligned_cols=241  Identities=22%  Similarity=0.290  Sum_probs=215.5

Q ss_pred             CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHH---HHHHHHHHHH
Q 021410            1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE---CKDFFRTLYS   76 (312)
Q Consensus         1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~---~~~~~~~~~~   76 (312)
                      .|.+| ||+|.|+++.+|+.++.++++.+..|+++..++++|.|++||+|.|++.+......+..+.   ...+...+..
T Consensus        19 ~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~   98 (266)
T KOG0016|consen   19 FIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSC   98 (266)
T ss_pred             EEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHH
Confidence            37889 9999999999999999999999999999999999999999999999998875543222222   2223333445


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      +...+..+|||+||.|||+|+|.|+.+...||+++|+|+++|..|++++|..|++|+++.+|+++|.. |.+|++.|+++
T Consensus        99 ~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kl  178 (266)
T KOG0016|consen   99 FVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKL  178 (266)
T ss_pred             HHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcc
Confidence            77888899999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||.+.|||+++++++.+.+.+.                                                       
T Consensus       179 tA~Ea~~~glVskif~~~tf~~~v~-------------------------------------------------------  203 (266)
T KOG0016|consen  179 TAQEACEKGLVSKIFPAETFNEEVL-------------------------------------------------------  203 (266)
T ss_pred             cHHHHHhcCchhhhcChHHHHHHHH-------------------------------------------------------
Confidence            9999999999999999987764322                                                       


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  +.++++++.||.+++..|++++......+..+.+.|.+.....|.   |+|+-+.+.+|+.+++
T Consensus       204 ------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~---s~e~~~~~~~~~~~~~  264 (266)
T KOG0016|consen  204 ------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV---SAECLARFKQYLSKKR  264 (266)
T ss_pred             ------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc---ChHHHHHHHHHhcccc
Confidence                        237889999999999999999999999999999999999999998   9999999999998875

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=100.00  E-value=4.1e-43  Score=307.02  Aligned_cols=177  Identities=16%  Similarity=0.144  Sum_probs=149.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCce-EEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++ |++|.+|+.+|.+++++++.|++++ +||++|.|++||+|+|++++...  .........+...+++++.
T Consensus        12 ~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~~~~~~~~~~~   88 (239)
T PLN02267         12 ILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHLMVAKLRPLVA   88 (239)
T ss_pred             EEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHHHHHHHHHHHH
Confidence            589999985 9999999999999999999999865 88889999999999999986421  1112222334455667888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-H-HHHHhcCCCCC
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G-EFLALTGAKLN  156 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a-~~l~ltg~~i~  156 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++.++++++|.. + +++++||++++
T Consensus        89 ~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~  168 (239)
T PLN02267         89 DLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLT  168 (239)
T ss_pred             HHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCC
Confidence            8999999999999999999999999999999998 5689999999999974444578899999988 7 69999999999


Q ss_pred             HHHHHHcCccceecCC-CChhHHHH
Q 021410          157 GAEMMACGLATHYSVS-EKLPLIEE  180 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~-~~l~~~~~  180 (312)
                      |+||+++||||+++|+ +++.+.+.
T Consensus       169 a~eA~~~Glv~~vv~~~~~l~~~a~  193 (239)
T PLN02267        169 AEEAVEMGIVDSAHDSAEETVEAAV  193 (239)
T ss_pred             HHHHHHCCCcceecCCHHHHHHHHH
Confidence            9999999999999985 45654333

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=100.00  E-value=4e-43  Score=349.25  Aligned_cols=286  Identities=16%  Similarity=0.160  Sum_probs=205.2

Q ss_pred             CEEecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEE-EEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~v-vl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||+ +.|++|.+|+.+|.++++.++.|+++|+| |++|.|++||+|+|++++...   .+......+....++++
T Consensus        25 ~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~l~  101 (737)
T TIGR02441        25 VVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQEVTQLSQEGQEMF  101 (737)
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHHHHHHHHHHHHHH
Confidence            58999998 68999999999999999999999999965 579999999999999988531   12233445556667888


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++  ++|++||+++|++|++|++++|+|++|.. +.+|++||+++
T Consensus       102 ~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i  181 (737)
T TIGR02441       102 ERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKI  181 (737)
T ss_pred             HHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcC
Confidence            8999999999999999999999999999999999997  58999999999999999999999999998 99999999999


Q ss_pred             CHHHHHHcCccceecCC--CC---hhHH-HHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC-CCHH
Q 021410          156 NGAEMMACGLATHYSVS--EK---LPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL-DTVE  228 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~--~~---l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  228 (312)
                      +|+||+++||||+|+|+  ++   +++. .+.+...+......+...+...++...... ...      ....+. ....
T Consensus       182 ~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~  254 (737)
T TIGR02441       182 RADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVH-KIT------QYVMTNPFVRQ  254 (737)
T ss_pred             CHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccC-ccc------hhhcccchhHH
Confidence            99999999999999986  21   2111 111111111111111110100000000000 000      000000 0011


Q ss_pred             HHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeec
Q 021410          229 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL  308 (312)
Q Consensus       229 ~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~  308 (312)
                      .+++..           ..+..++ .+....+...+.+.+..+...+++++++.|.+.|.+++.   |++.+.-++.|+.
T Consensus       255 ~~~~~~-----------~~~~~~~-~~g~~~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~~---s~~a~al~~~f~~  319 (737)
T TIGR02441       255 QVYKTA-----------EDKVMKQ-TKGLYPAPLKILDVVRTGYDQGPDAGYEAESKAFGELSM---TFESKALIGLFHG  319 (737)
T ss_pred             HHHHHH-----------HHHHHHh-ccCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHH
Confidence            111111           1112223 333234455577788888888999999999999999998   9999999999987


Q ss_pred             cCC
Q 021410          309 NKH  311 (312)
Q Consensus       309 ~r~  311 (312)
                      +|.
T Consensus       320 ~~~  322 (737)
T TIGR02441       320 QTD  322 (737)
T ss_pred             HHH
Confidence            653

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=7.4e-41  Score=271.99  Aligned_cols=236  Identities=19%  Similarity=0.221  Sum_probs=208.6

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410            2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL   81 (312)
Q Consensus         2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (312)
                      |+||+|+|.|.++.+|+.+|.+.+....++.++|+|||+..|+.||+|.||+++.+.   ...+.....++...+++..|
T Consensus        45 i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~d~haevFqtc~dvmn~I  121 (287)
T KOG1682|consen   45 ITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGSDIHAEVFQTCTDVMNDI  121 (287)
T ss_pred             eeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccchHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999888899999999999999999999998753   22344456778888999999


Q ss_pred             hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHH
Q 021410           82 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEM  160 (312)
Q Consensus        82 ~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA  160 (312)
                      .++|+|||+-|||++..+||.|...||+++|+++++|..|..++|++...-+.. +.|.+++. +.+|++||.+|+++||
T Consensus       122 rn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRkva~~ML~Tg~Pi~~eeA  200 (287)
T KOG1682|consen  122 RNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRKVAAYMLMTGLPITGEEA  200 (287)
T ss_pred             hcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-HhhhcchhHHHHHHHhCCCCchHHH
Confidence            999999999999999999999999999999999999999999999976554333 78999988 9999999999999999


Q ss_pred             HHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccCC
Q 021410          161 MACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASL  240 (312)
Q Consensus       161 ~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (312)
                      +..|||+++||+++++...+.+                                                          
T Consensus       201 l~sGlvskvVp~~el~~e~~~i----------------------------------------------------------  222 (287)
T KOG1682|consen  201 LISGLVSKVVPAEELDKEIEEI----------------------------------------------------------  222 (287)
T ss_pred             HHhhhhhhcCCHHHHHHHHHHH----------------------------------------------------------
Confidence            9999999999999987544433                                                          


Q ss_pred             CCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          241 INDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       241 ~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .++|...|...+.+-|+.+......+-.+++..-.+....-+.   -.|++|||.+|++||-
T Consensus       223 ---------~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~q---l~d~kegiasf~~krp  281 (287)
T KOG1682|consen  223 ---------TNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQ---LGDTKEGIASFFEKRP  281 (287)
T ss_pred             ---------HHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccc---ccchHHHHHHHhccCC
Confidence                     6778888888888899988877777888888888888777776   7999999999999983

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=100.00  E-value=3e-40  Score=281.14  Aligned_cols=180  Identities=32%  Similarity=0.517  Sum_probs=164.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +|+||+|++.|++|.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++++......  .+....+...++.++..
T Consensus        11 ~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~--~~~~~~~~~~~~~~~~~   88 (195)
T cd06558          11 TITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDA--GEEARAFIRELQELLRA   88 (195)
T ss_pred             EEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccccc--chhHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999999999998754211  11355677888899999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +..+|||+||+|||+|+|+|++++++||+||++++++|++||+++|++|++|+++++++++|.. +.+++++|+.++++|
T Consensus        89 i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~e  168 (195)
T cd06558          89 LLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEE  168 (195)
T ss_pred             HHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999988 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHH
Q 021410          160 MMACGLATHYSVSEKLPLIEEEL  182 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~  182 (312)
                      |+++|||+++++.+++.+.+..+
T Consensus       169 a~~~Glv~~~~~~~~l~~~a~~~  191 (195)
T cd06558         169 ALELGLVDEVVPDEELLAAALEL  191 (195)
T ss_pred             HHHcCCCCeecChhHHHHHHHHH
Confidence            99999999999987776555544

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=100.00  E-value=6.7e-41  Score=274.69  Aligned_cols=237  Identities=19%  Similarity=0.295  Sum_probs=190.1

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC--C-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~--g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      ||||||+++|++.+..+.||.+++..+..|++|.+|||||.  | ++||+|+|-+--.....-.+.+....  -...++.
T Consensus        32 ItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~r--LnvLdlQ  109 (282)
T COG0447          32 ITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPR--LNVLDLQ  109 (282)
T ss_pred             EEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCcc--cchhhHH
Confidence            89999999999999999999999999999999999999985  5 89999999764321100001111111  1123556


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      +.|..+||||||.|+|+++|||-.|-+.||+.||+++++|+..-.++|-+-++.++.+|.|++|.. |+++.+.++.++|
T Consensus       110 rlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A  189 (282)
T COG0447         110 RLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDA  189 (282)
T ss_pred             HHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccH
Confidence            678899999999999999999999999999999999999999999999987777777899999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++|+||.|||.++|++....                                                        
T Consensus       190 ~eal~MGlVN~Vvp~~~LE~e~v~--------------------------------------------------------  213 (282)
T COG0447         190 EEALDMGLVNTVVPHADLEKETVQ--------------------------------------------------------  213 (282)
T ss_pred             HHHHhcCceeeeccHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999998754433                                                        


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                             |    ++.|..+||.+++..|-.++.... ++ .++. |+..-..++. ..+++.+||-.||++||+
T Consensus       214 -------W----~~E~l~kSP~AlR~LK~Afnad~D-Gl-aG~q-~~ag~at~L~-YmTdEa~EGr~AF~eKR~  272 (282)
T COG0447         214 -------W----AREMLAKSPTALRMLKAAFNADCD-GL-AGLQ-ELAGNATLLY-YMTDEAQEGRDAFLEKRK  272 (282)
T ss_pred             -------H----HHHHHhcChHHHHHHHHHhcCCCc-hh-hHHH-HhcccceEEE-EechhhhhhHHHHhhccC
Confidence                   3    688889999999999988874322 11 1211 2222222221 238999999999999996

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=100.00  E-value=3.2e-39  Score=308.84  Aligned_cols=181  Identities=15%  Similarity=0.193  Sum_probs=152.6

Q ss_pred             CEEecCCC----------CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHH
Q 021410            1 MAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECK   68 (312)
Q Consensus         1 ~itln~p~----------~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~   68 (312)
                      +||||||+          |+|++|.+|+.+|.++++.++ .|+++|+|||||. |++||+|+|++++..... .......
T Consensus        23 ~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~~-~~~~~~~  101 (546)
T TIGR03222        23 TLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLSTH-AWKVNFC  101 (546)
T ss_pred             EEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhcccc-chhhhHH
Confidence            58999976          899999999999999999999 7899999999997 589999999998743210 0011111


Q ss_pred             HHH-HHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCc-ccccCCCchHHHhh--hcCh
Q 021410           69 DFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPDAGASFYLS--HLPG  142 (312)
Q Consensus        69 ~~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~g  142 (312)
                      .+. .....+...+.++||||||+|||+|+|||++|+++||+||++++  ++|++||++ +|++|++|++.+++  +.+|
T Consensus       102 ~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg  181 (546)
T TIGR03222       102 KFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVR  181 (546)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhC
Confidence            111 11223455677899999999999999999999999999999996  799999997 99999999998887  6889


Q ss_pred             HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 021410          143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL  182 (312)
Q Consensus       143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~  182 (312)
                      .. +++|++||+.|+|+||+++||||++||++++.+.+.++
T Consensus       182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~l  222 (546)
T TIGR03222       182 RDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAER  222 (546)
T ss_pred             HHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHH
Confidence            98 99999999999999999999999999998887766665

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=100.00  E-value=2.6e-38  Score=303.60  Aligned_cols=186  Identities=16%  Similarity=0.205  Sum_probs=153.1

Q ss_pred             CEEecCC-------C---CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHH
Q 021410            1 MAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECK   68 (312)
Q Consensus         1 ~itln~p-------~---~~Nal~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~   68 (312)
                      +||||||       +   +.|++|.+|+.+|.+++++++ .|+++|+|||||.+ ++||+|+|++++...... ......
T Consensus        27 ~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~~-~~~~~~  105 (550)
T PRK08184         27 TLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSHA-WKVNFC  105 (550)
T ss_pred             EEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhccccc-hhhhHH
Confidence            5899965       4   899999999999999999999 78999999999985 899999999987432110 000111


Q ss_pred             HHHHH-HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCc-ccccCCCchHHHhh--hcCh
Q 021410           69 DFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPDAGASFYLS--HLPG  142 (312)
Q Consensus        69 ~~~~~-~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r~~g  142 (312)
                      .+... ...+...+.++||||||+|||+|+|||++|+++|||||++++  ++|++||++ +|++|++|++++++  +++|
T Consensus       106 ~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg  185 (550)
T PRK08184        106 KFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVR  185 (550)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcC
Confidence            11111 122445677899999999999999999999999999999987  899999997 99999999999998  7799


Q ss_pred             HH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH-hhhhc
Q 021410          143 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVT  187 (312)
Q Consensus       143 ~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~-~~~~~  187 (312)
                      .. +.+|++||+.++|+||+++||||+++|++++.+.+.++ .+++.
T Consensus       186 ~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ia~  232 (550)
T PRK08184        186 RDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAA  232 (550)
T ss_pred             HHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHh
Confidence            98 99999999999999999999999999998887665555 33433

>cd07014 S49_SppA Signal peptide peptidase A

Probab=99.84  E-value=3.8e-21  Score=160.98  Aligned_cols=141  Identities=16%  Similarity=0.105  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      -.+.+|.++++.++.|+++|+|||++    +|.|+|+....                .+.+++..+.+++|||||+++|.
T Consensus        22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~   81 (177)
T cd07014          22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN   81 (177)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence            35789999999999999999999997    68998876421                23345666778999999999999


Q ss_pred             eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHH--------HhhhcCh--HH-HHHHHhcCCCCCHHHHHHcC
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG  164 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~--------~l~r~~g--~~-a~~l~ltg~~i~a~eA~~~G  164 (312)
                      |.|+|+.|+++||+++++++++|+.+.+..+..+......        .+++..|  .. ..+++..|..++|++|++.|
T Consensus        82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G  161 (177)
T cd07014          82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG  161 (177)
T ss_pred             hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence            9999999999999999999999999988776433222222        3444445  55 78888999999999999999


Q ss_pred             ccceecCCCChh
Q 021410          165 LATHYSVSEKLP  176 (312)
Q Consensus       165 lv~~vv~~~~l~  176 (312)
                      |||++.+.+++.
T Consensus       162 LVD~v~~~~e~~  173 (177)
T cd07014         162 LVDSLGSFDDAV  173 (177)
T ss_pred             CcccCCCHHHHH
Confidence            999999866553

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.82  E-value=5.8e-20  Score=155.01  Aligned_cols=138  Identities=12%  Similarity=0.075  Sum_probs=112.1

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++..+...+.+.++.+++++ ++.|+|.=.    |.|+++..-                   ..++..|..+|||||++
T Consensus         9 ~I~~~~~~~l~~~l~~a~~~~-~~~vvl~In----SpGG~v~~~-------------------~~i~~~l~~~~kPvia~   64 (187)
T cd07020           9 AITPATADYLERAIDQAEEGG-ADALIIELD----TPGGLLDST-------------------REIVQAILASPVPVVVY   64 (187)
T ss_pred             EEChHHHHHHHHHHHHHHhCC-CCEEEEEEE----CCCCCHHHH-------------------HHHHHHHHhCCCCEEEE
Confidence            366778889999999998765 788888633    566665421                   13344566799999999


Q ss_pred             Ec---cceecccceeecCCCeEEEeCceeEecCCCcccccCCC--------------chHHHhhhcChH--H-HHHHHhc
Q 021410           92 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPGH--L-GEFLALT  151 (312)
Q Consensus        92 v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~--------------g~~~~l~r~~g~--~-a~~l~lt  151 (312)
                      |+   |+|.|||+.++++||+++++++++|+.+++..+..+..              +....+++..|.  . +.+++++
T Consensus        65 v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~  144 (187)
T cd07020          65 VYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRE  144 (187)
T ss_pred             EecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence            99   99999999999999999999999999999985554432              234567888886  4 8899999


Q ss_pred             CCCCCHHHHHHcCccceecCCC
Q 021410          152 GAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      |+.++|+||+++||||+++++.
T Consensus       145 g~~~~a~eA~~~Glvd~v~~~~  166 (187)
T cd07020         145 SLSLTAEEALKLGVIDLIAADL  166 (187)
T ss_pred             CCeecHHHHHHcCCcccccCCH
Confidence            9999999999999999999875

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=99.66  E-value=1.6e-16  Score=136.56  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=75.0

Q ss_pred             CHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEc
Q 021410           14 NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN   93 (312)
Q Consensus        14 ~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~   93 (312)
                      +..++.+|.++|+.+..||++++|||+    .||+|+|+..+.                .+++.+..+..++|||||+++
T Consensus        19 ~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~----------------~~~~~l~~~~~~~kpVia~v~   78 (211)
T cd07019          19 GNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE----------------VIRAELAAARAAGKPVVVSAG   78 (211)
T ss_pred             CccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEEC
Confidence            455689999999999999999999998    699999997542                122345567788999999999


Q ss_pred             cceecccceeecCCCeEEEeCceeEec
Q 021410           94 GVTMGGGAGVSIPGTFRVACGKTVFAT  120 (312)
Q Consensus        94 G~a~GgG~~lal~~D~~ia~~~a~f~~  120 (312)
                      |.|.|+|+.|+++||+++++++++|+.
T Consensus        79 g~a~s~gy~la~~aD~i~a~~~a~~gs  105 (211)
T cd07019          79 GAAASGGYWISTPANYIVANPSTLTGS  105 (211)
T ss_pred             CeehhHHHHHHHhCCEEEEcCCCEEEE
Confidence            999999999999999999999988863

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=99.61  E-value=3.3e-15  Score=123.15  Aligned_cols=134  Identities=14%  Similarity=0.146  Sum_probs=103.7

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..++.+|.+.|+.++.|++++.|+|..    .|.|+|+...                   ..+...+..++||||+.+
T Consensus         8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~-------------------~~i~~~l~~~~kpvva~~   64 (161)
T cd00394           8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG-------------------MNIVDALQASRKPVIAYV   64 (161)
T ss_pred             EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH-------------------HHHHHHHHHhCCCEEEEE
Confidence            56688999999999999999999999987    4778876532                   123445667889999999


Q ss_pred             ccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchH------HH----hhhc---------ChHH-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FY----LSHL---------PGHL-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~------~~----l~r~---------~g~~-a~~l~ltg  152 (312)
                      +|.|.++|+.|+++||.|++.+++.|++..+..+.....+..      ..    ..+.         +... ..+++..|
T Consensus        65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~  144 (161)
T cd00394          65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD  144 (161)
T ss_pred             CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence            999999999999999999999999999998876654322000      01    1111         1222 45677789


Q ss_pred             CCCCHHHHHHcCcccee
Q 021410          153 AKLNGAEMMACGLATHY  169 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~v  169 (312)
                      ..++++||+++||||++
T Consensus       145 ~~~~a~eA~~~GLvD~i  161 (161)
T cd00394         145 LVLTAQEALEYGLVDAL  161 (161)
T ss_pred             cEEcHHHHHHcCCcCcC
Confidence            99999999999999975

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A

Probab=99.59  E-value=2.8e-15  Score=116.36  Aligned_cols=92  Identities=39%  Similarity=0.727  Sum_probs=82.1

Q ss_pred             HHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhc
Q 021410          214 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSR  293 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~  293 (312)
                      ....|++||+.+++++|++.|+..    ..+|+.++++.|.++||.|+++|.++++++...++.+++++|+++..+++. 
T Consensus         5 ~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~-   79 (118)
T PF13766_consen    5 HLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR-   79 (118)
T ss_dssp             CHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc-
Confidence            456799999999999999999983    779999999999999999999999999999999999999999999999998 


Q ss_pred             CCCCChhhhhheeeccCCC
Q 021410          294 LISGDFYEVSNFQILNKHV  312 (312)
Q Consensus       294 ~~~~d~~eg~~a~l~~r~~  312 (312)
                        .+||.|||+|.|+||+.
T Consensus        80 --~~DF~EGVRA~LIDKd~   96 (118)
T PF13766_consen   80 --HPDFAEGVRALLIDKDK   96 (118)
T ss_dssp             --CSCHHHHHHHHTTS---
T ss_pred             --cchHHHHHHHHHhcCCC
Confidence              89999999999999973

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=99.56  E-value=1.9e-14  Score=124.07  Aligned_cols=97  Identities=19%  Similarity=0.159  Sum_probs=76.0

Q ss_pred             ecCCCCCCC-CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPSALNA-LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~~~Na-l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      .++|...|+ ++..++.+|.++++.++.|+++++|||+.    +|.|+++...                ..+.+.+..+.
T Consensus        12 ~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~----------------~~l~~~l~~~~   71 (214)
T cd07022          12 VPRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV----------------FELADAIRAAR   71 (214)
T ss_pred             eCCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH----------------HHHHHHHHHHh
Confidence            355665665 45789999999999999999999999976    5677765422                11223333344


Q ss_pred             hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecC
Q 021410           83 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP  121 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~p  121 (312)
                      . +|||||+++|.|.|+|+.++++||+++|++++.|+..
T Consensus        72 ~-~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i  109 (214)
T cd07022          72 A-GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI  109 (214)
T ss_pred             c-CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence            4 6999999999999999999999999999999988654

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=99.54  E-value=1.9e-14  Score=118.45  Aligned_cols=128  Identities=15%  Similarity=0.178  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      .+...+.+.|+.+..+..+ .+.|.+      .|+++..                   ...+...+..+|||||+.++|.
T Consensus        15 ~~~~~~~~~l~~~~~~~~i-~l~ins------pGG~~~~-------------------~~~i~~~i~~~~~pvi~~v~g~   68 (160)
T cd07016          15 VTAKEFKDALDALGDDSDI-TVRINS------PGGDVFA-------------------GLAIYNALKRHKGKVTVKIDGL   68 (160)
T ss_pred             cCHHHHHHHHHhccCCCCE-EEEEEC------CCCCHHH-------------------HHHHHHHHHhcCCCEEEEEcch
Confidence            5677888889988887333 344444      4444321                   1234556777899999999999


Q ss_pred             eecccceeecCCCeEEEeCceeEecCCCcccccCCCch---------------HHHhhhcCh--HH-HHHHHhcCCCCCH
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNG  157 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~---------------~~~l~r~~g--~~-a~~l~ltg~~i~a  157 (312)
                      |.|+|+.++++||+|+++++++|+++....|..+....               ...+.+..|  .. ...++.++..+++
T Consensus        69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a  148 (160)
T cd07016          69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA  148 (160)
T ss_pred             HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence            99999999999999999999999998877665444321               223566667  45 6777777778999


Q ss_pred             HHHHHcCcccee
Q 021410          158 AEMMACGLATHY  169 (312)
Q Consensus       158 ~eA~~~Glv~~v  169 (312)
                      +||+++||||+|
T Consensus       149 ~eA~~~GliD~v  160 (160)
T cd07016         149 QEAVELGFADEI  160 (160)
T ss_pred             HHHHHcCCCCcC
Confidence            999999999985

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=99.50  E-value=7e-14  Score=120.05  Aligned_cols=139  Identities=19%  Similarity=0.171  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcc
Q 021410           15 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG   94 (312)
Q Consensus        15 ~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G   94 (312)
                      +.++.+|.++++.++.|+++++|+|++    +|.|+|+....                .+.+.+..+..++|||||+++|
T Consensus        16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g   75 (208)
T cd07023          16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGD   75 (208)
T ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECC
Confidence            678999999999999999999999999    48899886421                1234556677789999999999


Q ss_pred             ceecccceeecCCCeEEEeCceeEecCCC------------cccccCCCc---------h---------HHHhhhcCh--
Q 021410           95 VTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAG---------A---------SFYLSHLPG--  142 (312)
Q Consensus        95 ~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~~g---------~---------~~~l~r~~g--  142 (312)
                      .|.|+|+.++++||.+++++.+.|+..-+            ++|+-+..-         .         ...+..++.  
T Consensus        76 ~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~  155 (208)
T cd07023          76 VAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDI  155 (208)
T ss_pred             cchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999998864322            233322110         0         011111111  


Q ss_pred             ---------------HHHHHHHhcCCCCCHHHHHHcCccceecCCC
Q 021410          143 ---------------HLGEFLALTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       143 ---------------~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                                     .....-++.|..+++++|++.||||++...+
T Consensus       156 ~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~  201 (208)
T cd07023         156 YDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLD  201 (208)
T ss_pred             HHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHH
Confidence                           1112234688899999999999999997533

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=99.48  E-value=1.2e-13  Score=135.03  Aligned_cols=149  Identities=18%  Similarity=0.240  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      .....+.+.++.+..|++||+|||+-.    |.|++....                +.+++.+..+...+||||+.++|.
T Consensus       329 ~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e~i~~~i~~~~~~gKPVva~~~g~  388 (584)
T TIGR00705       329 TGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------EIIRRELARAQARGKPVIVSMGAM  388 (584)
T ss_pred             cCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------HHHHHHHHHHHhCCCcEEEEECCc
Confidence            345678888999999999999999975    334433210                112233444666789999999999


Q ss_pred             eecccceeecCCCeEEEeCceeE------ecCC------CcccccCCCchHHHhhh------------------------
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH------------------------  139 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f------~~pe------~~~G~~p~~g~~~~l~r------------------------  139 (312)
                      |.+||+.++++||.++|++.+.+      +.+.      .++|+.|+...+..+..                        
T Consensus       389 aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y~  468 (584)
T TIGR00705       389 AASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGYR  468 (584)
T ss_pred             cccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999877      5553      57899887665544332                        


Q ss_pred             ----cC------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhc
Q 021410          140 ----LP------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT  187 (312)
Q Consensus       140 ----~~------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~  187 (312)
                          .+      .....+.+.+|+.++|+||+++||||++.   .++++....++++.
T Consensus       469 ~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~~~Ai~~a~~la~  523 (584)
T TIGR00705       469 RFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GLDEAVAKAAKLAH  523 (584)
T ss_pred             HHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CHHHHHHHHHHHcC
Confidence                22      22256778899999999999999999994   45444443344433

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=99.39  E-value=1.5e-12  Score=111.68  Aligned_cols=135  Identities=19%  Similarity=0.193  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCC--CcEEEEEccc
Q 021410           18 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL--KPHVAILNGV   95 (312)
Q Consensus        18 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--kp~Iaav~G~   95 (312)
                      ..+|.++|+.+..|+++++|||++.    |.|+++...                   ..+...|..++  |||||.++|.
T Consensus        15 ~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~-------------------~~l~~~i~~~~~~kpvia~v~g~   71 (207)
T TIGR00706        15 PEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS-------------------EEIYEKLKKLKAKKPVVASMGGV   71 (207)
T ss_pred             HHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH-------------------HHHHHHHHHhcCCCCEEEEECCc
Confidence            5788999999999999999999985    788877532                   12233444455  9999999999


Q ss_pred             eecccceeecCCCeEEEeCceeEecCCC------------cccccCC---------Cc-----hH----HHhh-------
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPD---------AG-----AS----FYLS-------  138 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~---------~g-----~~----~~l~-------  138 (312)
                      |.|+|+.|+++||.++|++++.|+..-+            ++|+-+.         .+     .+    ..+.       
T Consensus        72 a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~  151 (207)
T TIGR00706        72 AASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESY  151 (207)
T ss_pred             cchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999988765333            2333110         00     00    0111       


Q ss_pred             ----------hcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410          139 ----------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL  175 (312)
Q Consensus       139 ----------r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l  175 (312)
                                |-+.....+=++.|+.+++++|++.||||++...+++
T Consensus       152 ~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~  198 (207)
T TIGR00706       152 EQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDA  198 (207)
T ss_pred             HHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence                      1122221223468999999999999999999765544

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=99.34  E-value=4.6e-12  Score=109.79  Aligned_cols=142  Identities=12%  Similarity=-0.005  Sum_probs=101.6

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      -+..++.+|.+.|+++..||++++|||+..+..| ++.++.++                   ++.+..+...+|||||.+
T Consensus        26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el-------------------~~~i~~~~~~~kpVia~~   85 (222)
T cd07018          26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL-------------------RQALERFRASGKPVIAYA   85 (222)
T ss_pred             cCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH-------------------HHHHHHHHHhCCeEEEEe
Confidence            4567899999999999999999999999988766 65555543                   233444556799999999


Q ss_pred             ccceecccceeecCCCeEEEeCceeEecCCCc------------ccccCC---------CchHHH-----------hhh-
Q 021410           93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGASFY-----------LSH-  139 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~~p~---------~g~~~~-----------l~r-  139 (312)
                      +| |.+||+.++++||.+++.+.+.|+..-+.            +|+-+.         .+..+.           +.. 
T Consensus        86 ~~-~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~  164 (222)
T cd07018          86 DG-YSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQAL  164 (222)
T ss_pred             CC-CCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHH
Confidence            98 88999999999999999999999885432            222111         111110           011 


Q ss_pred             ----------------cChHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410          140 ----------------LPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL  175 (312)
Q Consensus       140 ----------------~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l  175 (312)
                                      -+.....+-+..|+.+++++|++.||||++...+++
T Consensus       165 l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~  216 (222)
T cd07018         165 LDSLWDQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL  216 (222)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence                            111111222346999999999999999999854443

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.34  E-value=5.6e-12  Score=105.06  Aligned_cols=133  Identities=17%  Similarity=0.252  Sum_probs=98.2

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .+++.+...|.+.|+++++++ ++.|+|.=.    |.|+++..                   ...+...|..+++|||+.
T Consensus         9 ~I~~~~~~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~~-------------------~~~I~~~l~~~~~pvva~   64 (178)
T cd07021           9 EIDPGLAAFVERALKEAKEEG-ADAVVLDID----TPGGRVDS-------------------ALEIVDLILNSPIPTIAY   64 (178)
T ss_pred             EECHHHHHHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHHH-------------------HHHHHHHHHhCCCCEEEE
Confidence            366788889999999999887 777777654    55665542                   224556677899999999


Q ss_pred             EccceecccceeecCCCeEEEeCceeEecCCCcccccCCCch--------HHH------hhhcChHH---HHHHHhcC--
Q 021410           92 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGHL---GEFLALTG--  152 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~--------~~~------l~r~~g~~---a~~l~ltg--  152 (312)
                      |+|.|.|+|+.++++||++++++++.|+.+..-    +..|.        +..      +.+.-|+.   +..|+-..  
T Consensus        65 V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v----~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~  140 (178)
T cd07021          65 VNDRAASAGALIALAADEIYMAPGATIGAAEPI----PGDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIE  140 (178)
T ss_pred             ECCchHHHHHHHHHhCCeEEECCCCeEecCeeE----cCCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhcc
Confidence            999999999999999999999999999998543    33222        111      12222332   45555444  


Q ss_pred             -----------CCCCHHHHHHcCccceecCC
Q 021410          153 -----------AKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       153 -----------~~i~a~eA~~~Glv~~vv~~  172 (312)
                                 -.++++||++.|++|.++++
T Consensus       141 v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~  171 (178)
T cd07021         141 VPGVGIKGGELLTLTADEALKVGYAEGIAGS  171 (178)
T ss_pred             cccccccccceeeeCHHHHHHhCCeEEEECC
Confidence                       27999999999999999864

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=98.89  E-value=1.1e-08  Score=84.45  Aligned_cols=137  Identities=10%  Similarity=0.201  Sum_probs=100.8

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .+++.+..-|.+.++.+++| +++.|+|.=.    |.|+++...                   ..++..|...++||++.
T Consensus         9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~~-------------------~~I~~~i~~~~~pvv~~   64 (172)
T cd07015           9 QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAA-------------------GNIVQRIQQSKIPVIIY   64 (172)
T ss_pred             EECHhHHHHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCcCEEEE
Confidence            36778888899999998876 4788887665    667666432                   13344566789999999


Q ss_pred             Ec---cceecccceeecCCCeEEEeCceeEecCCCcccccCC----Cc----hHHHhh------hcChH--H-HHHHHhc
Q 021410           92 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----AG----ASFYLS------HLPGH--L-GEFLALT  151 (312)
Q Consensus        92 v~---G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~----~g----~~~~l~------r~~g~--~-a~~l~lt  151 (312)
                      |+   |.|..+|..++++||.+++.+++.++....-.|..+.    ..    .+..+.      +.-|+  . +..++-.
T Consensus        65 v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~  144 (172)
T cd07015          65 VYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITK  144 (172)
T ss_pred             EecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHh
Confidence            99   9999999999999999999999999998875432120    00    011111      12232  2 5677778


Q ss_pred             CCCCCHHHHHHcCccceecCC
Q 021410          152 GAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ...++++||+++|++|.++.+
T Consensus       145 ~~~lta~EA~~~G~iD~ia~~  165 (172)
T cd07015         145 DLSLTPEEALKYGVIEVVARD  165 (172)
T ss_pred             hcCcCHHHHHHcCCceeeeCC
Confidence            888999999999999999865

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle

>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=98.87  E-value=1.5e-08  Score=83.42  Aligned_cols=134  Identities=13%  Similarity=0.084  Sum_probs=92.6

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+..++.+.|..++.++..+.|+|.=.    |.|+++..                   ...++..|..+++|+++.+
T Consensus         9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------~~~i~~~i~~~~~~v~~~~   65 (162)
T cd07013           9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVFA-------------------GMAIYDTIKFIKADVVTII   65 (162)
T ss_pred             ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCceEEE
Confidence            567889999999999999887777777655    56666532                   1234555667889999999


Q ss_pred             ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg  152 (312)
                      .|.|.++|..++++||  .|++.++++|.+....-|......-..               .+.+.-|.  . ...++-.+
T Consensus        66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~  145 (162)
T cd07013          66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERD  145 (162)
T ss_pred             EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence            9999999999999999  688888888876543322211100001               01111121  1 34555566


Q ss_pred             CCCCHHHHHHcCcccee
Q 021410          153 AKLNGAEMMACGLATHY  169 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~v  169 (312)
                      ..++|+||+++||||++
T Consensus       146 ~~~sa~eA~~~GliD~i  162 (162)
T cd07013         146 TWLSAREAVEYGFADTI  162 (162)
T ss_pred             ccccHHHHHHcCCCCcC
Confidence            77799999999999985

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas

>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=98.77  E-value=4.2e-09  Score=94.67  Aligned_cols=163  Identities=18%  Similarity=0.043  Sum_probs=132.3

Q ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410            3 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL   81 (312)
Q Consensus         3 tln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (312)
                      +++ |+ .|..|.++.++|..-++.++.+..+++..+|+.. +.|++|.|..++.-.    +......++..+.+++...
T Consensus        71 dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg----~h~fspa~~m~LlEii~~~  144 (380)
T KOG1683|consen   71 DMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG----MHFFSPAHWMQLLEIILAL  144 (380)
T ss_pred             cee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc----ccccCHHHHHHHHHHHHhc
Confidence            345 66 4999999999999999999999989999999988 999999999987633    3444455667788899999


Q ss_pred             hhCCCcEEEEEccceeccc--ceeecCCCeEEEeC--ceeEecCCCcccc-cCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           82 GTHLKPHVAILNGVTMGGG--AGVSIPGTFRVACG--KTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        82 ~~~~kp~Iaav~G~a~GgG--~~lal~~D~~ia~~--~a~f~~pe~~~G~-~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      .+++.|+.+++||++--||  +-++.+|+|++...  .=..+..+...++ +|++-.-. +....|.. +..-+--|.-+
T Consensus       145 ~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~-~~t~fGf~~g~~~L~d~~gf  223 (380)
T KOG1683|consen  145 YTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDS-LITKFGFRVGERALADGVGF  223 (380)
T ss_pred             CCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHH-HHHhcCccccHHHHhhccCc
Confidence            9999999999999999888  99999999999984  4444778888884 44443333 33445666 66666788899


Q ss_pred             CHHHHHHcCccceecCC
Q 021410          156 NGAEMMACGLATHYSVS  172 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~  172 (312)
                      +..||++-|+++++.|.
T Consensus       224 dv~eal~~gl~~~~~~r  240 (380)
T KOG1683|consen  224 DVAEALAVGLGDEIGPR  240 (380)
T ss_pred             cHHHHHhhccchhccch
Confidence            99999999999999885

>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=98.76  E-value=4.2e-08  Score=83.48  Aligned_cols=134  Identities=16%  Similarity=0.088  Sum_probs=87.1

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+...|..++.++..+-|.|.=.    |.|+|+..                   ...++..|...+.|+++.+
T Consensus        40 I~~~~~~~i~~~L~~l~~~~~~~~I~l~In----SpGG~v~~-------------------g~~I~d~i~~~~~~v~t~~   96 (200)
T PRK00277         40 VEDHMANLIVAQLLFLEAEDPDKDIYLYIN----SPGGSVTA-------------------GLAIYDTMQFIKPDVSTIC   96 (200)
T ss_pred             ECHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCcHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence            577888888888888876644333433322    45555432                   1234445667788999999


Q ss_pred             ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH------------------HhhhcChH--H-HHHHH
Q 021410           93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF------------------YLSHLPGH--L-GEFLA  149 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~------------------~l~r~~g~--~-a~~l~  149 (312)
                      .|.|.+.|..|+++++  .|++.++++|++....-|.   .|.+.                  .+...-|.  . ...++
T Consensus        97 ~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~  173 (200)
T PRK00277         97 IGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGF---QGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDT  173 (200)
T ss_pred             EeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccc---cCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence            9999999999988743  5777777776665443222   11111                  11222232  2 34555


Q ss_pred             hcCCCCCHHHHHHcCccceecCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      -.+..++|+||+++||||+|+.+
T Consensus       174 ~~~~~lsa~EA~e~GliD~Ii~~  196 (200)
T PRK00277        174 DRDNFMSAEEAKEYGLIDEVLTK  196 (200)
T ss_pred             hCCccccHHHHHHcCCccEEeec
Confidence            66778999999999999999975

>PRK10949 protease 4; Provisional

Probab=98.67  E-value=1.1e-07  Score=93.43  Aligned_cols=133  Identities=18%  Similarity=0.221  Sum_probs=89.3

Q ss_pred             HHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceec
Q 021410           19 AKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG   98 (312)
Q Consensus        19 ~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~G   98 (312)
                      ..+.+.|+.+..|++||+|||+-.    |.|+....                .+.+++.+..+....||||+.+.|.|..
T Consensus       350 ~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~a----------------se~i~~~i~~~r~~gKPVvas~~~~aAS  409 (618)
T PRK10949        350 DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTA----------------SEVIRAELAAARAAGKPVVVSMGGMAAS  409 (618)
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHH----------------HHHHHHHHHHHHhcCCcEEEEECCCCcc
Confidence            456778899999999999999887    44443321                1223344444556789999999999999


Q ss_pred             ccceeecCCCeEEEeCceeEecCCC------------cccccCCCchH-----------------HHhh-----------
Q 021410           99 GGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDAGAS-----------------FYLS-----------  138 (312)
Q Consensus        99 gG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~~g~~-----------------~~l~-----------  138 (312)
                      ||+.++++||.++|.+.+..+.--+            ++|+-+..-.+                 ..+.           
T Consensus       410 ggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~  489 (618)
T PRK10949        410 GGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIENGYKRFI  489 (618)
T ss_pred             HHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999765443221            23432221100                 0111           


Q ss_pred             ------hcChHHHHHHHhcCCCCCHHHHHHcCccceecC
Q 021410          139 ------HLPGHLGEFLALTGAKLNGAEMMACGLATHYSV  171 (312)
Q Consensus       139 ------r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~  171 (312)
                            |-+.....+-+..|+.+++++|++.||||++-.
T Consensus       490 ~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~  528 (618)
T PRK10949        490 TLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGD  528 (618)
T ss_pred             HHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCC
Confidence                  111111122346899999999999999999965

>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=98.64  E-value=1.7e-07  Score=80.21  Aligned_cols=136  Identities=14%  Similarity=0.054  Sum_probs=96.7

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++..+..++.+.|..++..+..+.|.|.=.    |.|+++..-                   ..++..|..++.|+++.
T Consensus        43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~~I~d~i~~~~~~v~t~   99 (207)
T PRK12553         43 QVDDASANDVMAQLLVLESIDPDRDITLYIN----SPGGSVTAG-------------------DAIYDTIQFIRPDVQTV   99 (207)
T ss_pred             eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHHH-------------------HHHHHHHHhcCCCcEEE
Confidence            3678899999999999987654444444333    556665421                   23455566788899999


Q ss_pred             EccceecccceeecCCC--eEEEeCceeEecCCCcc-cccCCCchH------------------HHhhhcChH--H-HHH
Q 021410           92 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGAS------------------FYLSHLPGH--L-GEF  147 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~-G~~p~~g~~------------------~~l~r~~g~--~-a~~  147 (312)
                      +.|.|.+.|.-|+++||  .|++.++++|.+..... |.  ..|..                  ..+.+.-|.  . ...
T Consensus       100 ~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~  177 (207)
T PRK12553        100 CTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRK  177 (207)
T ss_pred             EEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            99999999999999999  59999999999877653 21  12211                  112222232  2 455


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCC
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ++-.+..++|+||+++||||+|+++
T Consensus       178 ~~~~~~~lta~EA~e~GliD~I~~~  202 (207)
T PRK12553        178 DTDRDKWLTAEEAKDYGLVDQIITS  202 (207)
T ss_pred             HHhcCccccHHHHHHcCCccEEcCc
Confidence            6667899999999999999999964

>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=98.59  E-value=2.5e-07  Score=76.85  Aligned_cols=134  Identities=16%  Similarity=0.087  Sum_probs=94.8

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+...+..+..++..+.|+|.=.    |.|+|+..-                   ..++..|...+.|+++.+
T Consensus        18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~~-------------------~~i~~~l~~~~~~v~t~~   74 (171)
T cd07017          18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTAG-------------------LAIYDTMQYIKPPVSTIC   74 (171)
T ss_pred             EcHHHHHHHHHHHHHHHccCCCCceEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence            577888999999999998766565555443    556655421                   133444566789999999


Q ss_pred             ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg  152 (312)
                      .|.|.++|.-+++++|  -|++.++++|.+.+...+..-...-..               .+....|.  . ...++-.+
T Consensus        75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~  154 (171)
T cd07017          75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRD  154 (171)
T ss_pred             EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCC
Confidence            9999999999999999  799999999999887655432210000               00111121  2 34555678


Q ss_pred             CCCCHHHHHHcCcccee
Q 021410          153 AKLNGAEMMACGLATHY  169 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~v  169 (312)
                      ..++++||+++||||+|
T Consensus       155 ~~lta~EA~e~GiiD~V  171 (171)
T cd07017         155 RYMSAEEAKEYGLIDKI  171 (171)
T ss_pred             ccccHHHHHHcCCCccC
Confidence            88999999999999986

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ

>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=98.53  E-value=6.1e-07  Score=76.04  Aligned_cols=137  Identities=14%  Similarity=0.091  Sum_probs=91.8

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+.+.|..++..+..+.|.|.=.    |.|+++..                   ...++..|...+.||++.+
T Consensus        32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~a-------------------g~aI~d~i~~~~~~V~t~v   88 (197)
T PRK14512         32 INKDLSELFQEKILLLEALDSKKPIFVYID----SEGGDIDA-------------------GFAIFNMIRFVKPKVFTIG   88 (197)
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHhCCCCEEEEE
Confidence            678888999999988876333444444433    55666532                   1234555667899999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg  152 (312)
                      .|.|.+.|.-++++||-  |++.++++|.+....-|+.....-..               .+...-|.  . ...++-..
T Consensus        89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d  168 (197)
T PRK14512         89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD  168 (197)
T ss_pred             EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence            99999999999999985  99999998877655433311111000               01111122  1 34445556


Q ss_pred             CCCCHHHHHHcCccceecCC
Q 021410          153 AKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ..++|+||+++||+|+|++.
T Consensus       169 ~~lta~EA~~yGliD~I~~~  188 (197)
T PRK14512        169 FWLDSSSAVKYGLVFEVVET  188 (197)
T ss_pred             cccCHHHHHHcCCccEeecC
Confidence            77999999999999999975

>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.50  E-value=2.9e-07  Score=77.33  Aligned_cols=137  Identities=16%  Similarity=0.157  Sum_probs=90.1

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      +|.++...+...|..++.++..+-|.|.=.    |.|+|+..-                   ..++..|..++.|+++.+
T Consensus        25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN----SpGG~v~~g-------------------~~i~~~i~~~~~~v~t~~   81 (182)
T PF00574_consen   25 IDEESANRLISQLLYLENEDKNKPINIYIN----SPGGDVDAG-------------------LAIYDAIRSSKAPVTTVV   81 (182)
T ss_dssp             BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE----ECEBCHHHH-------------------HHHHHHHHHSSSEEEEEE
T ss_pred             cCHHHHHHHHHHHHHHhccCCCceEEEEEc----CCCCccHHH-------------------HHHHHHHHhcCCCeEEEE
Confidence            688899999998887743332222222211    566766431                   245566778899999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH----Hhhh-----------cCh--HH-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSH-----------LPG--HL-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~----~l~r-----------~~g--~~-a~~l~ltg  152 (312)
                      .|.|.+.|.-++++||.  |++.+++.|.+.+...+.........    .+.+           ..|  .. ..+++-..
T Consensus        82 ~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~  161 (182)
T PF00574_consen   82 LGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRD  161 (182)
T ss_dssp             EEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSST
T ss_pred             eCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCC
Confidence            99999999999999999  89999999999988766533111111    0100           111  11 23444455


Q ss_pred             CCCCHHHHHHcCccceecCC
Q 021410          153 AKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ..++|+||+++||||+|+.+
T Consensus       162 ~~l~a~EA~~~GiiD~I~~~  181 (182)
T PF00574_consen  162 TWLSAEEALEYGIIDEIIES  181 (182)
T ss_dssp             EEEEHHHHHHHTSSSEEESS
T ss_pred             ccccHHHHHHcCCCCEeccC
Confidence            56899999999999999853

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....

>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit

Probab=98.42  E-value=1.7e-06  Score=73.37  Aligned_cols=136  Identities=13%  Similarity=0.076  Sum_probs=94.7

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      +|.++.+.+...|-.++.++..+-|.|.=.    |.|+|+..                   ...++..|...+.||...+
T Consensus        39 i~~~~a~~ii~~ll~L~~~~~~~~I~l~IN----SpGG~v~~-------------------g~aIyd~m~~~~~~V~Tv~   95 (200)
T CHL00028         39 VDDEIANQLIGLMVYLSIEDDTKDLYLFIN----SPGGSVIS-------------------GLAIYDTMQFVKPDVHTIC   95 (200)
T ss_pred             ecHHHHHHHHHHHHHHhccCCCCCEEEEEe----CCCcchhh-------------------HHHHHHHHHhcCCCEEEEE
Confidence            688899999999998876544444444333    45555432                   1234556778899999999


Q ss_pred             ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCch-HH-----------------HhhhcChH--H-HHHHH
Q 021410           93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA-SF-----------------YLSHLPGH--L-GEFLA  149 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~-~~-----------------~l~r~~g~--~-a~~l~  149 (312)
                      .|.|.+.|.-|++++|  -|++.++++|.+.....|..  .|- +-                 .+...-|.  . ..+++
T Consensus        96 ~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~--~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~  173 (200)
T CHL00028         96 LGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFY--EGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDM  173 (200)
T ss_pred             EEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence            9999999999999999  69999999999887765532  221 11                 11111121  1 24455


Q ss_pred             hcCCCCCHHHHHHcCccceecCCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      -....++|+||+++||||+|+.+.
T Consensus       174 ~r~~~lta~EA~eyGliD~I~~~~  197 (200)
T CHL00028        174 ERDVFMSATEAKAYGIVDLVAVNN  197 (200)
T ss_pred             hcCccCCHHHHHHcCCCcEEeecC
Confidence            566679999999999999999754

>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional

Probab=98.42  E-value=3.9e-06  Score=73.74  Aligned_cols=138  Identities=16%  Similarity=0.081  Sum_probs=94.0

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ..+++++-+....+.++.+.+.. +-+|-|.=.++++. |.+-.             .......+.+.+..+....+|+|
T Consensus        76 ~G~~~~~g~rKa~R~~~lA~~~~-lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~I  140 (256)
T PRK12319         76 FGQPHPEGYRKALRLMKQAEKFG-RPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPII  140 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence            45688999999999999887653 55565555433332 32211             11223445566677888999999


Q ss_pred             EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH--HHHHHHhcCCCCCHHHHHHcCccc
Q 021410           90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--LGEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      +.|-|.|.|||......||++++.+++.|+.       .++-|++..+-+--..  .+.+.+    .+++.++.+.|+||
T Consensus       141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD  209 (256)
T PRK12319        141 AIIIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVD  209 (256)
T ss_pred             EEEeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCc
Confidence            9999999999888888999999998887654       3333333333332111  133332    77999999999999


Q ss_pred             eecCCC
Q 021410          168 HYSVSE  173 (312)
Q Consensus       168 ~vv~~~  173 (312)
                      +|+|..
T Consensus       210 ~ii~e~  215 (256)
T PRK12319        210 KVIPEH  215 (256)
T ss_pred             EecCCC
Confidence            999854

>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP

Probab=98.37  E-value=3.6e-06  Score=71.08  Aligned_cols=136  Identities=15%  Similarity=0.042  Sum_probs=89.9

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+...|..++.++..+-|.|.=.    |.|+|+..                   ...++..|...+.|+...+
T Consensus        35 I~~~~~~~ii~~L~~l~~~~~~~~i~l~In----SpGG~v~~-------------------g~~I~d~l~~~~~~v~t~~   91 (191)
T TIGR00493        35 VNDSVANLIVAQLLFLEAEDPEKDIYLYIN----SPGGSITA-------------------GLAIYDTMQFIKPDVSTIC   91 (191)
T ss_pred             EChHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence            567777888888888887654444444333    45666532                   1233445566677888888


Q ss_pred             ccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH---------------HhhhcChH--H-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGH--L-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~--~-a~~l~ltg  152 (312)
                      .|.|.+.|.-+++++|  .|++.++++|.+.+...|......-..               .+.+.-|.  . ...++-.+
T Consensus        92 ~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~~  171 (191)
T TIGR00493        92 IGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTERD  171 (191)
T ss_pred             EEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhCC
Confidence            8999999998888765  699999999999776544322111110               11122232  2 45566677


Q ss_pred             CCCCHHHHHHcCccceecC
Q 021410          153 AKLNGAEMMACGLATHYSV  171 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~  171 (312)
                      ..++|+||+++||+|+|+.
T Consensus       172 ~~lta~EA~~~GliD~ii~  190 (191)
T TIGR00493       172 FFMSAEEAKEYGLIDSVLT  190 (191)
T ss_pred             ccCcHHHHHHcCCccEEec
Confidence            8899999999999999974

This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.

>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional

Probab=98.36  E-value=6.5e-06  Score=74.10  Aligned_cols=140  Identities=14%  Similarity=0.041  Sum_probs=93.4

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ..+++++-++...+.++.+++.. +-+|-|--.+++++ |.+-.             .......+.+.+..+....+|+|
T Consensus       132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDTpGA~~-G~~AE-------------~~G~~~aiar~l~~~a~~~VP~I  196 (322)
T CHL00198        132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDTPGAWA-GVKAE-------------KLGQGEAIAVNLREMFSFEVPII  196 (322)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCc-CHHHH-------------HHhHHHHHHHHHHHHHcCCCCEE
Confidence            45688999999999999988653 55555544433333 32111             11223445556666788999999


Q ss_pred             EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410           90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  169 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v  169 (312)
                      +.|-|.|.|||......||++++.+++.|+.      +.|.++++. |-+--.. +.+ +-..-.++|++.++.|+||+|
T Consensus       197 sVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~I-l~~d~~~-a~~-aA~~~~ita~dL~~~giiD~i  267 (322)
T CHL00198        197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAI-LWKDSKK-SLD-AAEALKITSEDLKVLGIIDEI  267 (322)
T ss_pred             EEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHH-Hhcchhh-HHH-HHHHcCCCHHHHHhCCCCeEe
Confidence            9999999888866555699999999987764      234444433 3332221 222 234458899999999999999


Q ss_pred             cCCC
Q 021410          170 SVSE  173 (312)
Q Consensus       170 v~~~  173 (312)
                      +|..
T Consensus       268 i~Ep  271 (322)
T CHL00198        268 IPEP  271 (322)
T ss_pred             ccCC
Confidence            9843

>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.35  E-value=5.5e-06  Score=75.56  Aligned_cols=85  Identities=19%  Similarity=0.309  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410           18 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM   97 (312)
Q Consensus        18 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~   97 (312)
                      ...+.+.++.+..|++++.|+|.=.    |.|+....                ...+++.+..+..-. ||++.|++.|.
T Consensus        82 ~~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~a----------------s~~i~~~l~~l~~~~-PV~v~v~~~AA  140 (317)
T COG0616          82 GDDIEEILRAARADPSVKAVVLRIN----SPGGSVVA----------------SELIARALKRLRAKK-PVVVSVGGYAA  140 (317)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEEEE----CcCCchhH----------------HHHHHHHHHHHhhcC-CEEEEECCeec
Confidence            4566667888899999999999775    56665431                122334444454444 99999999999


Q ss_pred             cccceeecCCCeEEEeCceeEecCCC
Q 021410           98 GGGAGVSIPGTFRVACGKTVFATPET  123 (312)
Q Consensus        98 GgG~~lal~~D~~ia~~~a~f~~pe~  123 (312)
                      .||..++++||.+||++.+..|---+
T Consensus       141 SGGY~IA~aAd~I~a~p~si~GSIGV  166 (317)
T COG0616         141 SGGYYIALAADKIVADPSSITGSIGV  166 (317)
T ss_pred             chhhhhhccCCEEEecCCceeeecee
Confidence            99999999999999999886665443

>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=98.24  E-value=1.4e-05  Score=68.63  Aligned_cols=137  Identities=11%  Similarity=0.031  Sum_probs=88.9

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      +|..+.+.+...|..++..+.-+-|.+.=+    |.|+++..                   ...++..|...+-||...+
T Consensus        63 Idd~~a~~i~aqLl~L~~~~~~~~I~lyIN----SpGGsv~a-------------------GlaIyd~m~~~~~~V~tv~  119 (221)
T PRK14514         63 IDDYTANTIQAQLLYLDSVDPGKDISIYIN----SPGGSVYA-------------------GLGIYDTMQFISSDVATIC  119 (221)
T ss_pred             EcHHHHHHHHHHHHHHhccCCCCCEEEEEE----CCCcchhh-------------------HHHHHHHHHhcCCCEEEEE
Confidence            567777777777766664332232322222    44444431                   1234556777889999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH---------------HhhhcChHH---HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF---------------YLSHLPGHL---GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~---------------~l~r~~g~~---a~~l~ltg  152 (312)
                      .|.|.+.|.-|++++|.  |++.++++|.+....-|......-..               .+.+.-|..   ..+.+-..
T Consensus       120 ~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~~rd  199 (221)
T PRK14514        120 TGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADSDRD  199 (221)
T ss_pred             EEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcC
Confidence            99999999999999996  99999999988776544322211011               011122321   34455567


Q ss_pred             CCCCHHHHHHcCccceecCC
Q 021410          153 AKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ..++|+||+++||||+|+..
T Consensus       200 ~wmtA~EA~eyGliD~Vi~~  219 (221)
T PRK14514        200 YWMTAQEAKEYGMIDEVLIK  219 (221)
T ss_pred             ccCCHHHHHHcCCccEEeec
Confidence            77999999999999999863

>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit

Probab=98.23  E-value=3e-05  Score=69.89  Aligned_cols=138  Identities=12%  Similarity=0.039  Sum_probs=91.4

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ..+++++-+....+.++.+++- .+-+|-|.-.+++++ |.+..             .......+.+.+..+....+|+|
T Consensus       129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE-------------~~G~~~aia~~l~a~s~~~VP~I  193 (316)
T TIGR00513       129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAE-------------ERGQSEAIARNLREMARLGVPVI  193 (316)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHH-------------HHHHHHHHHHHHHHHHcCCCCEE
Confidence            4568899999999999988865 355555544433333 22211             11223445566777888999999


Q ss_pred             EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh--HHHHHHHhcCCCCCHHHHHHcCccc
Q 021410           90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HLGEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g--~~a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      +.|-|.|.|||......||++++.+++.++       ++++-|++..+-+--.  ..+.+    -..+++.++.+.|+||
T Consensus       194 sVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae----~~~~ta~~l~~~G~iD  262 (316)
T TIGR00513       194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAE----AMKITAPDLKELGLID  262 (316)
T ss_pred             EEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHH----HccCCHHHHHHCCCCe
Confidence            999999977777555569999999888665       4443444443433211  12222    2567899999999999


Q ss_pred             eecCCC
Q 021410          168 HYSVSE  173 (312)
Q Consensus       168 ~vv~~~  173 (312)
                      .|+|..
T Consensus       263 ~II~ep  268 (316)
T TIGR00513       263 SIIPEP  268 (316)
T ss_pred             EeccCC
Confidence            999843

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=98.23  E-value=1.5e-05  Score=67.41  Aligned_cols=139  Identities=12%  Similarity=0.035  Sum_probs=93.3

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .+|.++..++...|..++.++..+-|.|.=.    |.|+|+..-                   ..++..|...+-||...
T Consensus        33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~IN----SpGG~v~~g-------------------~aIyd~m~~~~~~V~t~   89 (196)
T PRK12551         33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYIN----SPGGSVYDG-------------------LGIFDTMQHVKPDVHTV   89 (196)
T ss_pred             eecHHHHHHHHHHHHHhhccCCCCCEEEEEe----CCCcchhhH-------------------HHHHHHHHhcCCCEEEE
Confidence            3688888999999988886543344444333    455555321                   23455566788899999


Q ss_pred             EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH----H-----------hhhcChHH---HHHHHhc
Q 021410           92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----Y-----------LSHLPGHL---GEFLALT  151 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~----~-----------l~r~~g~~---a~~l~lt  151 (312)
                      +.|.|.+.|.-|++++|-  |++.++++|.+....-|..-...-..    .           +.+.-|..   ..+++-.
T Consensus        90 ~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~r  169 (196)
T PRK12551         90 CVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDR  169 (196)
T ss_pred             EEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhc
Confidence            999999999999999985  88999999888776433221111111    0           11111221   2444555


Q ss_pred             CCCCCHHHHHHcCccceecCCC
Q 021410          152 GAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      ...++|+||+++||||+|++..
T Consensus       170 d~~msa~EA~eyGliD~I~~~~  191 (196)
T PRK12551        170 DFFMSPSEAVEYGLIDLVIDKR  191 (196)
T ss_pred             CcCCCHHHHHHcCCCcEEeccC
Confidence            6679999999999999999764

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

Probab=98.22  E-value=1.6e-05  Score=77.99  Aligned_cols=139  Identities=12%  Similarity=-0.006  Sum_probs=93.6

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ..+++++-++...+.++.++... +-+|-|-=.+++++ |.+...             ......+.+.+..+....+|+|
T Consensus       220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I  284 (762)
T PLN03229        220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV  284 (762)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence            45678888999999998887653 45555544333332 222211             1233445566777888999999


Q ss_pred             EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410           90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  169 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v  169 (312)
                      ++|-|.|.|||......||+++|.+++.++       +.++-|++..+-+-... +.+ +-..-.|+|++.+++|+||+|
T Consensus       285 SVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~~-A~e-AAe~lkiTa~dL~~lGiiD~I  355 (762)
T PLN03229        285 SIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAKA-APK-AAEKLRITAQELCRLQIADGI  355 (762)
T ss_pred             EEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCccc-HHH-HHHHcCCCHHHHHhCCCCeee
Confidence            999999988888777779999999887654       44444444444332221 222 234458899999999999999


Q ss_pred             cCC
Q 021410          170 SVS  172 (312)
Q Consensus       170 v~~  172 (312)
                      +|.
T Consensus       356 IpE  358 (762)
T PLN03229        356 IPE  358 (762)
T ss_pred             ccC
Confidence            984

>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional

Probab=98.21  E-value=3.1e-05  Score=71.57  Aligned_cols=137  Identities=15%  Similarity=0.064  Sum_probs=90.0

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      .+++++-+....+.++.++... +-+|-|.=.++++ .|.+..             .......+.+.+..+....+|+|+
T Consensus       200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTpGA~-pG~~AE-------------e~Gqa~aIAr~l~ams~l~VPiIS  264 (431)
T PLN03230        200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTPGAY-AGIKAE-------------ELGQGEAIAFNLREMFGLRVPIIA  264 (431)
T ss_pred             CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcC-CCHHHH-------------HHhHHHHHHHHHHHHhcCCCCEEE
Confidence            4688999999999999988653 5555554433332 222211             112334455667778899999999


Q ss_pred             EEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH-HHHHHHhcCCCCCHHHHHHcCcccee
Q 021410           91 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHY  169 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~a~~l~ltg~~i~a~eA~~~Glv~~v  169 (312)
                      .|-|.+.|||......||+++|.+++.++.      +.|.++++.++....-. .+.+    .-.++|.++++.|+||+|
T Consensus       265 VViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~I  334 (431)
T PLN03230        265 TVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEI  334 (431)
T ss_pred             EEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEe
Confidence            999999666655445689999999876543      22444444333222111 2333    338999999999999999


Q ss_pred             cCC
Q 021410          170 SVS  172 (312)
Q Consensus       170 v~~  172 (312)
                      +|.
T Consensus       335 I~E  337 (431)
T PLN03230        335 VPE  337 (431)
T ss_pred             ccC
Confidence            974

>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=98.19  E-value=1.7e-05  Score=67.26  Aligned_cols=137  Identities=15%  Similarity=0.136  Sum_probs=92.4

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++.++-+.+...|-.++.++.-+-|.|.=+    |.|+|+..                   ...++..|...+-||...
T Consensus        35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~IN----SpGG~v~~-------------------GlaIyd~m~~~~~~V~Ti   91 (201)
T PRK14513         35 PIESQMANTIVAQLLLLDSQNPEQEIQMYIN----CPGGEVYA-------------------GLAIYDTMRYIKAPVSTI   91 (201)
T ss_pred             EEcHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCchhh-------------------HHHHHHHHHhcCCCEEEE
Confidence            3677788888887777776433232222222    45555432                   124555677788899999


Q ss_pred             EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHHHh------------------hhcChHH---HHHH
Q 021410           92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYL------------------SHLPGHL---GEFL  148 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~~l------------------~r~~g~~---a~~l  148 (312)
                      +.|.|.+.|.-|++++|-  |++.+++++.+.....|.   .|...-+                  .+.-|..   -.++
T Consensus        92 ~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~---~G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~~  168 (201)
T PRK14513         92 CVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGF---RGNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLRD  168 (201)
T ss_pred             EEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            999999999999999996  999999999988776554   2211111                  1111211   2344


Q ss_pred             HhcCCCCCHHHHHHcCccceecCCCC
Q 021410          149 ALTGAKLNGAEMMACGLATHYSVSEK  174 (312)
Q Consensus       149 ~ltg~~i~a~eA~~~Glv~~vv~~~~  174 (312)
                      +-....++|+||+++||||+|+++..
T Consensus       169 ~~rd~~msa~EA~eyGliD~I~~~~~  194 (201)
T PRK14513        169 MERDYFMSPEEAKAYGLIDSVIEPTR  194 (201)
T ss_pred             hccCcccCHHHHHHcCCCcEEeccCC
Confidence            45566799999999999999997654

>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated

Probab=98.16  E-value=3e-05  Score=69.95  Aligned_cols=140  Identities=12%  Similarity=0.062  Sum_probs=94.0

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ..+++++-++...+.++.+++- ++-+|-|.=.+++++ |.+-.             .......+.+.+..+....+|+|
T Consensus       129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE-------------~~G~~~aia~~l~~~a~~~VP~I  193 (319)
T PRK05724        129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAE-------------ERGQSEAIARNLREMARLKVPII  193 (319)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence            4568899999999999888765 356666655444333 32211             11223455567777889999999


Q ss_pred             EEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcccee
Q 021410           90 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  169 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~v  169 (312)
                      +.|-|.|.|||......||++++.+++.|+       ++++-|++..+-+-... +.+.. ....+++.++.+.|+||+|
T Consensus       194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~aa-e~~~ita~~l~~~g~iD~I  264 (319)
T PRK05724        194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEAA-EAMKITAQDLKELGIIDEI  264 (319)
T ss_pred             EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHHH-HHcCCCHHHHHHCCCceEe
Confidence            999999987776555569999988877654       44444444444443222 22222 2456899999999999999


Q ss_pred             cCCC
Q 021410          170 SVSE  173 (312)
Q Consensus       170 v~~~  173 (312)
                      +|..
T Consensus       265 I~Ep  268 (319)
T PRK05724        265 IPEP  268 (319)
T ss_pred             ccCC
Confidence            9743

>TIGR03133 malonate_beta malonate decarboxylase, beta subunit

Probab=98.02  E-value=0.00012  Score=64.93  Aligned_cols=140  Identities=12%  Similarity=0.073  Sum_probs=87.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhC
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH   84 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   84 (312)
                      ..-+++...-..+.++++.+.+|.    .+-+|.|.-.     .|+.+.+-.        ..+..+.+. ......+...
T Consensus        71 ~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dS-----gGaRlqEg~--------~~L~~~a~i-~~~~~~ls~~  136 (274)
T TIGR03133        71 QGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDT-----GGVRLQEAN--------AGLIAIAEI-MRAILDARAA  136 (274)
T ss_pred             cCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcC-----CCcChhhhH--------HHHHHHHHH-HHHHHHHhCC
Confidence            345677777788888888887622    2346666554     344443211        111122221 2222333344


Q ss_pred             CCcEEEEEccc--eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH--H-HHHHHhcCCCCCHHH
Q 021410           85 LKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLALTGAKLNGAE  159 (312)
Q Consensus        85 ~kp~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~--~-a~~l~ltg~~i~a~e  159 (312)
                       +|+|+.|.|+  |.||+..++..||++|+++++++++.-           ........|.  . ..+-.|.-+.+.+..
T Consensus       137 -vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG-----------P~VIe~~~G~e~~~~~d~~l~~~~lGG~~  204 (274)
T TIGR03133       137 -VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRTTGGKH  204 (274)
T ss_pred             -CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC-----------HHHHHHhcCCCccCHHHhcccccccchHh
Confidence             9999999999  899999999999999999987776621           1112222331  2 444445556677778


Q ss_pred             HHHcCccceecCCCC
Q 021410          160 MMACGLATHYSVSEK  174 (312)
Q Consensus       160 A~~~Glv~~vv~~~~  174 (312)
                      .+..|++|.+++++.
T Consensus       205 ~~~sG~~D~~v~dd~  219 (274)
T TIGR03133       205 RFLSGDADVLVEDDV  219 (274)
T ss_pred             HhhcccceEEeCCHH
Confidence            888999999998754

Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.

>PRK11778 putative inner membrane peptidase; Provisional

Probab=98.00  E-value=4.3e-05  Score=69.43  Aligned_cols=97  Identities=13%  Similarity=0.092  Sum_probs=65.1

Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc------------ccccCC---------Cch----
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGFHPD---------AGA----  133 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~~p~---------~g~----  133 (312)
                      .++...+||+|+.+++.|..||+.++++||-++|.+.+.++...+-            +|+-+.         .+.    
T Consensus       148 ~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~~  227 (330)
T PRK11778        148 QRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFGE  227 (330)
T ss_pred             HHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCCC
Confidence            3455678999999999999999999999999999998876654332            222100         000    


Q ss_pred             -H----HHhhhcC---------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410          134 -S----FYLSHLP---------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL  175 (312)
Q Consensus       134 -~----~~l~r~~---------------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l  175 (312)
                       +    ..+...+               +..-.+-+.+|+.++|++|++.||||++...+++
T Consensus       228 ~see~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~  289 (330)
T PRK11778        228 NTEEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY  289 (330)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence             0    0011111               1111223468999999999999999999765544

>PRK07189 malonate decarboxylase subunit beta; Reviewed

Probab=98.00  E-value=0.00017  Score=64.71  Aligned_cols=140  Identities=14%  Similarity=0.141  Sum_probs=84.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhC
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH   84 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   84 (312)
                      ..-+++......+..+++.+.++.    .+-+|.|.-.|     |+-+.+-.        .....+.+ +...+..+...
T Consensus        80 ~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-----GaRlqEg~--------~~L~~~a~-i~~~~~~ls~~  145 (301)
T PRK07189         80 MGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-----GVRLQEAN--------AGLAAIAE-IMRAIVDLRAA  145 (301)
T ss_pred             cCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-----CcCccchH--------HHHHHHHH-HHHHHHHHhCC
Confidence            345677888888999998887764    25566665543     33343211        11111222 12222334444


Q ss_pred             CCcEEEEEccc--eecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh--HH-HHHHHhcCCCCCHHH
Q 021410           85 LKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        85 ~kp~Iaav~G~--a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g--~~-a~~l~ltg~~i~a~e  159 (312)
                       +|+|+.|.|.  |+||+...+.+||++|+++++++++.-           ........|  .. ..+..+..+.+.+..
T Consensus       146 -VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaG-----------P~VIe~~~G~e~~d~~d~~~vw~~lGG~h  213 (301)
T PRK07189        146 -VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSG-----------PEVIEQEAGVEEFDSRDRALVWRTTGGKH  213 (301)
T ss_pred             -CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccC-----------HHHHHHhcCCcccCHHHhcccccccCcce
Confidence             9999999999  999999999999999999988776621           111111122  11 333333223333345


Q ss_pred             HHHcCccceecCCCC
Q 021410          160 MMACGLATHYSVSEK  174 (312)
Q Consensus       160 A~~~Glv~~vv~~~~  174 (312)
                      ....|.+|.+++++.
T Consensus       214 ~~~sG~~D~~v~dd~  228 (301)
T PRK07189        214 RYLSGLADALVDDDV  228 (301)
T ss_pred             eeecccceEEeCCHH
Confidence            566999999998654

>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit

Probab=97.86  E-value=0.00072  Score=58.91  Aligned_cols=147  Identities=13%  Similarity=0.038  Sum_probs=88.2

Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHh-hcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH---H
Q 021410            5 NRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY---L   80 (312)
Q Consensus         5 n~p~~~Nal~~~~~~~L~~~l~~~-~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~---~   80 (312)
                      |+|..  .++.+-...+.+.+... +.++++-+|.|.=.     .|..+..         .++.......+-++..   .
T Consensus        39 ~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDt-----pG~~~g~---------~aE~~G~~~a~A~l~~a~a~  102 (238)
T TIGR03134        39 VVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDT-----PSQAYGR---------REELLGINQALAHLAKALAL  102 (238)
T ss_pred             ECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeC-----CCCCCCH---------HHHHHHHHHHHHHHHHHHHH
Confidence            44442  68878888888888885 55566666666543     2322221         1122222333333333   4


Q ss_pred             HhhCCCcEEEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhc--CCCCCH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALT--GAKLNG  157 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~lt--g~~i~a  157 (312)
                      ....+.|+|+.|-|.+.|||+. +.+.+|.++|-       |...++..++-+++..+.+-... ..++.-+  -...+.
T Consensus       103 a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Al-------p~A~i~vm~~e~aa~I~~~~~~~-~~e~a~~~~~~a~~~  174 (238)
T TIGR03134       103 ARLAGHPVIGLIYGKAISGAFLAHGLQADRIIAL-------PGAMVHVMDLESMARVTKRSVEE-LEALAKSSPVFAPGI  174 (238)
T ss_pred             hhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEc-------CCcEEEecCHHHHHHHHccCHhH-HHHHHHhhhhhccCH
Confidence            4456699999999999988754 44457777666       55556666666555555444332 2222111  123577


Q ss_pred             HHHHHcCccceecCCCCh
Q 021410          158 AEMMACGLATHYSVSEKL  175 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l  175 (312)
                      +.+.+.|+||.|+++.+-
T Consensus       175 ~~~~~~G~vd~vi~~~~~  192 (238)
T TIGR03134       175 ENFVKLGGVHALLDVADA  192 (238)
T ss_pred             HHHHhCCCccEEeCCCCc
Confidence            889999999999987664

Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.

>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily

Probab=97.83  E-value=0.00025  Score=62.03  Aligned_cols=97  Identities=15%  Similarity=0.168  Sum_probs=77.0

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      +.++.+....+.++++....+..+-. +|.      +.|+++..                   ..++...+.+.+.|+++
T Consensus        70 ~~I~i~dse~v~raI~~~~~~~~IdL-ii~------TpGG~v~A-------------------A~~I~~~l~~~~~~v~v  123 (285)
T PF01972_consen   70 RYIDIDDSEFVLRAIREAPKDKPIDL-IIH------TPGGLVDA-------------------AEQIARALREHPAKVTV  123 (285)
T ss_pred             eeEcHhhHHHHHHHHHhcCCCCceEE-EEE------CCCCcHHH-------------------HHHHHHHHHhCCCCEEE
Confidence            45788888999999998877655533 333      45555532                   12455567789999999


Q ss_pred             EEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCch
Q 021410           91 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA  133 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~  133 (312)
                      .|+..|+.+|.-++++||-+++++.+.+|--..++|-.|..+.
T Consensus       124 ~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~si  166 (285)
T PF01972_consen  124 IVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASI  166 (285)
T ss_pred             EECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHH
Confidence            9999999999999999999999999999999999999886543

The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane

>PRK05654 acetyl-CoA carboxylase subunit beta; Validated

Probab=97.75  E-value=0.00077  Score=60.54  Aligned_cols=146  Identities=15%  Similarity=0.143  Sum_probs=91.6

Q ss_pred             ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      -|+|. ...+++...-..+.++++.+.+. .+-+|.|.-.|     |+.+.+       + ...+.++ ......+..+.
T Consensus       127 a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------g-i~sL~~~-ak~~~a~~~~~  191 (292)
T PRK05654        127 VMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------G-LLSLMQM-AKTSAALKRLS  191 (292)
T ss_pred             EEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------h-hhHHHhH-HHHHHHHHHHH
Confidence            34443 56789999999999999998776 46777777654     332221       0 1111122 12223344455


Q ss_pred             hCCCcEEEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHH
Q 021410           83 THLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMM  161 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~  161 (312)
                      ...+|.|+.+.|+|.||+.. +++.+|++||.+++.+++--.+           .+...++   .++  .-+.=+++-+.
T Consensus       192 ~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~---e~l--pe~~~~ae~~~  255 (292)
T PRK05654        192 EAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVR---EKL--PEGFQRAEFLL  255 (292)
T ss_pred             cCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhh---hhh--hhhhcCHHHHH
Confidence            67899999999999999654 5778999999988877663221           0111111   111  11122566677


Q ss_pred             HcCccceecCCCChhHHHH
Q 021410          162 ACGLATHYSVSEKLPLIEE  180 (312)
Q Consensus       162 ~~Glv~~vv~~~~l~~~~~  180 (312)
                      +.|+||.|+++.++.....
T Consensus       256 ~~G~vD~Vv~~~e~r~~l~  274 (292)
T PRK05654        256 EHGAIDMIVHRRELRDTLA  274 (292)
T ss_pred             hCCCCcEEECHHHHHHHHH
Confidence            8999999999988765433

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=97.74  E-value=0.0002  Score=70.66  Aligned_cols=85  Identities=13%  Similarity=-0.062  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      -.+.++.++++.+..|+.|++|||.-.+   +.|.++..+                +.+++.+..+....|||||..+++
T Consensus        76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~----------------~ei~~ai~~fk~sgKpVvA~~~~~  136 (584)
T TIGR00705        76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHL----------------VEIGSALSEFKDSGKPVYAYGTNY  136 (584)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHH----------------HHHHHHHHHHHhcCCeEEEEEccc
Confidence            3567999999999999999999998753   124443321                223344455566799999988877


Q ss_pred             eecccceeecCCCeEEEeCceeEec
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFAT  120 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~  120 (312)
                      + -+|+.|+.+||-+++.+.+.+++
T Consensus       137 ~-s~~YylAs~AD~I~~~p~G~v~~  160 (584)
T TIGR00705       137 S-QGQYYLASFADEIILNPMGSVDL  160 (584)
T ss_pred             c-chhhhhhhhCCEEEECCCceEEe
Confidence            5 67899999999999999877755

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification

Probab=97.74  E-value=1.9e-05  Score=64.50  Aligned_cols=94  Identities=17%  Similarity=0.108  Sum_probs=58.3

Q ss_pred             hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCc------------ccc---------cCCCc-----hH-
Q 021410           82 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL------------IGF---------HPDAG-----AS-  134 (312)
Q Consensus        82 ~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~------------~G~---------~p~~g-----~~-  134 (312)
                      ....|||||.++|.+..+|+.++.+||-+++.+.+.++..-+.            +|+         ....+     .+ 
T Consensus         3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~   82 (154)
T PF01343_consen    3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE   82 (154)
T ss_dssp             HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred             cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence            4679999999999999999999999999999998877664432            222         11111     00 


Q ss_pred             ---HHhhhcC-----------------hHHHHHHHhcCCCCCHHHHHHcCccceecCCCCh
Q 021410          135 ---FYLSHLP-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL  175 (312)
Q Consensus       135 ---~~l~r~~-----------------g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l  175 (312)
                         ..+.+++                 .....+-+..|..+++++|++.||||++...+++
T Consensus        83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~  143 (154)
T PF01343_consen   83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEA  143 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHH
Confidence               0111111                 1111222468999999999999999999754444

; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.

>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Probab=97.63  E-value=0.00093  Score=59.74  Aligned_cols=141  Identities=13%  Similarity=0.153  Sum_probs=89.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-+++......+.++++.+.+. .+-+|.|.-.|++     -+.+       + ...+.++. .....+..+....+|.
T Consensus       132 ~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----RmqE-------g-~~sL~~~a-k~~~~~~~~~~~~vP~  196 (285)
T TIGR00515       132 MGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQE-------A-LLSLMQMA-KTSAALAKMSERGLPY  196 (285)
T ss_pred             cCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----cccc-------c-hhHHHhHH-HHHHHHHHHHcCCCCE
Confidence            45678899999999999988765 4677777765443     2211       1 11111221 1222334455678999


Q ss_pred             EEEEccceecccce-eecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCccc
Q 021410           89 VAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        89 Iaav~G~a~GgG~~-lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      |+.+-|+|.||+.. +++.+|++||.+++.+++--.++           +...+|   .+  +.-+.=+++-+.+.|+||
T Consensus       197 IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprV-----------ie~ti~---e~--lpe~~q~ae~~~~~G~vD  260 (285)
T TIGR00515       197 ISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRV-----------IEQTVR---EK--LPEGFQTSEFLLEHGAID  260 (285)
T ss_pred             EEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHHH-----------HHHHhc---Cc--cchhcCCHHHHHhCCCCc
Confidence            99999999999644 56799999999998887733221           111111   11  111122556677899999


Q ss_pred             eecCCCChhHHHH
Q 021410          168 HYSVSEKLPLIEE  180 (312)
Q Consensus       168 ~vv~~~~l~~~~~  180 (312)
                      .|+++.++.....
T Consensus       261 ~iv~~~~~r~~l~  273 (285)
T TIGR00515       261 MIVHRPEMKKTLA  273 (285)
T ss_pred             EEECcHHHHHHHH
Confidence            9999988765433

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]

Probab=97.58  E-value=0.00055  Score=63.75  Aligned_cols=138  Identities=12%  Similarity=0.170  Sum_probs=99.1

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      +.+++.+.+.+.+.++.++++.. .+|||.=.    ..|                   .+.+.+.++...+.+.+.||+.
T Consensus        35 g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ld----TPG-------------------Gl~~sm~~iv~~i~~s~vPV~~   90 (436)
T COG1030          35 GAIDPASADYLQRALQSAEEENA-AAVVLELD----TPG-------------------GLLDSMRQIVRAILNSPVPVIG   90 (436)
T ss_pred             CccCHHHHHHHHHHHHHHHhCCC-cEEEEEec----CCC-------------------chHHHHHHHHHHHHcCCCCEEE
Confidence            56899999999999999987752 33443221    001                   1335566788899999999988


Q ss_pred             EE---ccceecccceeecCCCeEEEeCceeEecCCCcccc--cC-CCc-hHHH------hhhcChH--H-HHHHHhcCCC
Q 021410           91 IL---NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF--HP-DAG-ASFY------LSHLPGH--L-GEFLALTGAK  154 (312)
Q Consensus        91 av---~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~--~p-~~g-~~~~------l~r~~g~--~-a~~l~ltg~~  154 (312)
                      .|   .+.|..+|..++++||+..|.+.+.+|-...-.+-  .+ ... ....      +.+.-|+  . +.+++.....
T Consensus        91 yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN~~~ae~~v~~~~~  170 (436)
T COG1030          91 YVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRNPTWAERFVTENLS  170 (436)
T ss_pred             EEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCChHHHHHHhhhccC
Confidence            88   44699999999999999999999998876543222  11 111 1122      2233344  3 7889999999


Q ss_pred             CCHHHHHHcCccceecCC
Q 021410          155 LNGAEMMACGLATHYSVS  172 (312)
Q Consensus       155 i~a~eA~~~Glv~~vv~~  172 (312)
                      ++++||++.|++|-+..+
T Consensus       171 l~a~eA~~~~vid~iA~~  188 (436)
T COG1030         171 LTAEEALRQGVIDLIARD  188 (436)
T ss_pred             CChhHHHhcCccccccCC
Confidence            999999999999988753

>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.55  E-value=0.00067  Score=56.99  Aligned_cols=97  Identities=15%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             HHHHHHhhCCCcEEEEEccceecccceeecCCCeE--EEeCceeEecCCCcccccCCCchHHH--hhh-c----------
Q 021410           76 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFY--LSH-L----------  140 (312)
Q Consensus        76 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~--ia~~~a~f~~pe~~~G~~p~~g~~~~--l~r-~----------  140 (312)
                      .++..|...+.||...+-|.|...|.-|++++|-.  ++.+++++.+.-..-|+ -+. ++-.  -.+ +          
T Consensus        76 AIydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~gg~-~G~-a~Di~i~A~ei~~~~~~l~~i  153 (200)
T COG0740          76 AIYDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPSGGA-QGQ-ASDIEIHAREILKIKERLNRI  153 (200)
T ss_pred             HHHHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCCccC-ccC-HHHHHHHHHHHHHHHHHHHHH
Confidence            45566778999999999999999999999999986  88888888776665332 111 1110  000 0          


Q ss_pred             ----ChHH---HHHHHhcCCCCCHHHHHHcCccceecCCCC
Q 021410          141 ----PGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEK  174 (312)
Q Consensus       141 ----~g~~---a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~  174 (312)
                          -|..   -....-....++|+||+++||+|+|+...+
T Consensus       154 ~a~~TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~  194 (200)
T COG0740         154 YAEHTGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESRE  194 (200)
T ss_pred             HHHHcCCCHHHHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence                1111   122233455699999999999999997654

>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed

Probab=97.50  E-value=0.0019  Score=57.70  Aligned_cols=141  Identities=14%  Similarity=0.144  Sum_probs=84.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH-HhhCCCc
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL-LGTHLKP   87 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~kp   87 (312)
                      ..-+++...-..+.++++.+.+.. +-+|++..+|     |+-+.+-        ...+.++.+. ...+.. ...-.+|
T Consensus       145 ~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SG-----GARmQEg--------~~sL~qmak~-saa~~~~~~~~~vP  209 (296)
T CHL00174        145 MGGSMGSVVGEKITRLIEYATNES-LPLIIVCASG-----GARMQEG--------SLSLMQMAKI-SSALYDYQSNKKLF  209 (296)
T ss_pred             cccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCC-----Ccccccc--------chhhhhhHHH-HHHHHHHHHcCCCC
Confidence            345678888889999998887654 6677777643     4443321        1111122111 111222 2245799


Q ss_pred             EEEEEccceeccccee-ecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCcc
Q 021410           88 HVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLA  166 (312)
Q Consensus        88 ~Iaav~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv  166 (312)
                      .|+.+.|+|.||+... ++.||++|+.+++.+++.-.++           ....+|.   .  +.-..=+++-.++.|+|
T Consensus       210 ~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPrV-----------Ie~t~ge---~--lpe~fq~ae~l~~~G~v  273 (296)
T CHL00174        210 YISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRV-----------IEQTLNK---T--VPEGSQAAEYLFDKGLF  273 (296)
T ss_pred             EEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHHH-----------HHHhcCC---c--CCcccccHHHHHhCcCc
Confidence            9999999999998665 6679999998787765532210           0001110   0  01111246667789999


Q ss_pred             ceecCCCChhHHHH
Q 021410          167 THYSVSEKLPLIEE  180 (312)
Q Consensus       167 ~~vv~~~~l~~~~~  180 (312)
                      |.+|+..++.....
T Consensus       274 D~iV~r~~lr~~l~  287 (296)
T CHL00174        274 DLIVPRNLLKGVLS  287 (296)
T ss_pred             eEEEcHHHHHHHHH
Confidence            99999888765433

>PRK12552 ATP-dependent Clp protease-like protein; Reviewed

Probab=97.40  E-value=0.00097  Score=57.26  Aligned_cols=142  Identities=15%  Similarity=0.090  Sum_probs=87.7

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCce--EEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      .+.++.+.+...+-.++.++..+  -+-|-+.|+...+|-=+..                ......++..|...+-||..
T Consensus        49 ~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~----------------v~~glaIyD~m~~ik~~V~T  112 (222)
T PRK12552         49 VGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGF----------------ETEAFAICDTMRYIKPPVHT  112 (222)
T ss_pred             hhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCccccccccc----------------cccHHHHHHHHHhcCCCeEE
Confidence            34447777777777776543222  2334444544444411110                01122445556677888999


Q ss_pred             EEccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHHHhhh------------------cChHH---HHH
Q 021410           91 ILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLSH------------------LPGHL---GEF  147 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r------------------~~g~~---a~~  147 (312)
                      .+-|.|.+.+.-|++++|-  |++.++++|.+.....|..   |.+.-+..                  .-|..   -.+
T Consensus       113 v~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~---G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~  189 (222)
T PRK12552        113 ICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR---GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSK  189 (222)
T ss_pred             EEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            9999999999999999995  9999999998877765532   22221110                  11111   122


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCCC
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      .+-.-..++|+||+++||||+|+.+.
T Consensus       190 d~~rd~wmsA~EA~eyGliD~Ii~~~  215 (222)
T PRK12552        190 DTDRMFYLTPQEAKEYGLIDRVLESR  215 (222)
T ss_pred             HhcCCCcCCHHHHHHcCCCcEEeccC
Confidence            33344559999999999999999653

>PRK10949 protease 4; Provisional

Probab=97.27  E-value=0.0021  Score=63.77  Aligned_cols=86  Identities=15%  Similarity=0.024  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           16 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        16 ~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      -.+.++.++++.+..||.|++|||.-.+.   .|..+..                .+.+++.+..+....|||||.-+.+
T Consensus        95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~----------------~~eI~~ai~~fk~sGKpVvA~~~~~  155 (618)
T PRK10949         95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPS----------------MQYIGKALREFRDSGKPVYAVGDSY  155 (618)
T ss_pred             ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHH----------------HHHHHHHHHHHHHhCCeEEEEecCc
Confidence            34568999999999999999999988632   1222211                1223344455566789999864444


Q ss_pred             eecccceeecCCCeEEEeCceeEecC
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFATP  121 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~p  121 (312)
                       --+|+.|+.+||-+++.+.+.+++.
T Consensus       156 -~s~~YyLASaAD~I~l~P~G~v~~~  180 (618)
T PRK10949        156 -SQGQYYLASFANKIYLSPQGVVDLH  180 (618)
T ss_pred             -cchhhhhhhhCCEEEECCCceEEEe
Confidence             4578999999999999998766543

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=97.24  E-value=0.0071  Score=58.82  Aligned_cols=152  Identities=16%  Similarity=0.135  Sum_probs=95.0

Q ss_pred             ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      -|+|. ...+++++-.....+.++.+.+. .+-+|.|.-.++ |..|.+-             +........-+++..+.
T Consensus       321 And~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~-------------E~~g~~~~~a~~~~a~~  385 (512)
T TIGR01117       321 ANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQ-------------EYGGIIRHGAKVLYAYS  385 (512)
T ss_pred             EeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHH-------------HHHHHHHHHHHHHHHHH
Confidence            34543 34569999999999999988764 466666655444 4444321             11223344556777788


Q ss_pred             hCCCcEEEEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhh-cCh----HH-H-HH-H-H
Q 021410           83 THLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPG----HL-G-EF-L-A  149 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g----~~-a-~~-l-~  149 (312)
                      ...+|.|+.|-|.+.|||+.-..    .+|+++|.++++++       +.++-++...+-+ .+.    .. + .+ + -
T Consensus       386 ~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~  458 (512)
T TIGR01117       386 EATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAATRKQKIAE  458 (512)
T ss_pred             hCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHHHHHHHHH
Confidence            89999999999999888653332    38888877776554       4433333332222 111    01 1 11 1 1


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCChhH
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~l~~  177 (312)
                      +.-+..++..+.+.|+||.|+++.+...
T Consensus       459 ~~~~~~~~~~~a~~g~vD~VI~P~~tR~  486 (512)
T TIGR01117       459 YREEFANPYKAAARGYVDDVIEPKQTRP  486 (512)
T ss_pred             HHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence            1223457889999999999999988754

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]

Probab=96.59  E-value=0.0019  Score=56.76  Aligned_cols=93  Identities=12%  Similarity=0.096  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHh
Q 021410           71 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL  150 (312)
Q Consensus        71 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~l  150 (312)
                      ...+.+-+..+.++++|+||.|=|---+||.--...+|.+++-++++|+.      +.|.++++.++ += +..+.+. -
T Consensus       174 ~eAIA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILW-kD-~~ka~eA-A  244 (317)
T COG0825         174 SEAIARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILW-KD-ASKAKEA-A  244 (317)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhh-cC-hhhhHHH-H
Confidence            34455566778899999999998887666655555689999999999875      55666555433 21 2223332 3


Q ss_pred             cCCCCCHHHHHHcCccceecCC
Q 021410          151 TGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       151 tg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ....|+|.+.+++|+||.|+|.
T Consensus       245 e~mkita~dLk~lgiID~II~E  266 (317)
T COG0825         245 EAMKITAHDLKELGIIDGIIPE  266 (317)
T ss_pred             HHcCCCHHHHHhCCCcceeccC
Confidence            4568899999999999999974

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=96.59  E-value=0.015  Score=56.40  Aligned_cols=129  Identities=16%  Similarity=0.209  Sum_probs=86.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccC--CchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCC
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK   86 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k   86 (312)
                      +..+++......+.++++.+.++. +-+|.|.-     |.|+  ++.+-.        .....+.. +..-...+.. .+
T Consensus        69 ~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~d-----sgGa~~r~~eg~--------~~l~~~g~-i~~~~~~~~~-~i  132 (493)
T PF01039_consen   69 LGGSVGEVHGEKIARAIELALENG-LPLVYLVD-----SGGAFLRMQEGV--------ESLMGMGR-IFRAIARLSG-GI  132 (493)
T ss_dssp             GGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEE-----ESSBCGGGGGHH--------HHHHHHHH-HHHHHHHHHT-TS
T ss_pred             ecCCCCcccceeeehHHHHHHHcC-CCcEEecc-----ccccccccchhh--------hhhhhhHH-HHHHHHHHhc-CC
Confidence            456788888999999999888764 55666655     4555  443322        12222222 2223344555 99


Q ss_pred             cEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-----
Q 021410           87 PHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-----  160 (312)
Q Consensus        87 p~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-----  160 (312)
                      |+|+++.|+|.|||..++..||++|+.++ +.+++.                    |+...+ ..+|+.++.++.     
T Consensus       133 P~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~vv~-~~~Ge~~~~~~lgG~~~  191 (493)
T PF01039_consen  133 PQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPRVVE-SATGEEVDSEELGGADV  191 (493)
T ss_dssp             -EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THHHHH-HHHSSCTSHHHHHBHHH
T ss_pred             CeEEEEccccccchhhcccccCccccCccceEEEec--------------------cccccc-cccCccccchhhhhhhh
Confidence            99999999999999999999999999997 665542                    222122 245677777653     


Q ss_pred             --HHcCccceecCCCC
Q 021410          161 --MACGLATHYSVSEK  174 (312)
Q Consensus       161 --~~~Glv~~vv~~~~  174 (312)
                        ...|.+|.++++++
T Consensus       192 h~~~sG~~d~v~~de~  207 (493)
T PF01039_consen  192 HAAKSGVVDYVVDDEE  207 (493)
T ss_dssp             HHHTSSSSSEEESSHH
T ss_pred             hcccCCCceEEEechH
Confidence              47899999998654

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=96.45  E-value=0.021  Score=55.58  Aligned_cols=129  Identities=16%  Similarity=0.195  Sum_probs=77.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++......+.++++.+.++. +-+|.|.-.     .|+.+.+-.        .....+.+.+...  ....-.+|.
T Consensus        94 ~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dS-----gGarm~eg~--------~~l~~~~~~~~~~--~~~s~~iP~  157 (512)
T TIGR01117        94 MGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDS-----GGARIQEAV--------DALKGYGDIFYRN--TIASGVVPQ  157 (512)
T ss_pred             cccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecC-----CCCCccccc--------hhhhhHHHHHHHH--HHHcCCCcE
Confidence            456788888889999998887765 556666553     333332210        0111111111111  112345999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCce-eEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH-----HH-
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE-----MM-  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e-----A~-  161 (312)
                      |+++.|+|.||+......||++|+++++ .+++          .          |+...+. .+|+.++++|     .+ 
T Consensus       158 Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~----------a----------GP~vv~~-~~Ge~v~~e~lGGa~~h~  216 (512)
T TIGR01117       158 ISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFI----------T----------GPQVIKT-VTGEEVTAEQLGGAMAHN  216 (512)
T ss_pred             EEEEecCCCcHHHHHHHhcCceEEeccceEEEe----------c----------ChHHHHh-hcCcccchhhcchHHHhc
Confidence            9999999999998887899999999953 3433          1          1111111 3444444444     33 


Q ss_pred             -HcCccceecCCCC
Q 021410          162 -ACGLATHYSVSEK  174 (312)
Q Consensus       162 -~~Glv~~vv~~~~  174 (312)
                       .-|.+|.+++++.
T Consensus       217 ~~sGv~d~~~~de~  230 (512)
T TIGR01117       217 SVSGVAHFIAEDDD  230 (512)
T ss_pred             cccceeEEecCChH
Confidence             5899999987654

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=96.38  E-value=0.044  Score=53.90  Aligned_cols=133  Identities=16%  Similarity=0.119  Sum_probs=81.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +..+++......+.++++.+.+.. +-+|.|.-.|+.+-.+ ....+         .....+.+ +......+....+|.
T Consensus       141 ~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSgGarl~~-q~e~~---------~~~~~~g~-if~~~~~ls~~~VP~  208 (569)
T PLN02820        141 KGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSGGANLPR-QAEVF---------PDRDHFGR-IFYNQARMSSAGIPQ  208 (569)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCCcc-ccccc---------chHhHHHH-HHHHHHHHhCCCCCE
Confidence            567889999999999999987654 5677776644333211 00000         00011111 112223345567999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-----H-
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-----M-  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-----~-  161 (312)
                      |++|-|.|.|||......||++|++++ +.+.+          .          |+...+. .+|+.+++++.     + 
T Consensus       209 Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~----------a----------GP~vV~~-~~Ge~v~~eeLGGa~~h~  267 (569)
T PLN02820        209 IALVLGSCTAGGAYVPAMADESVIVKGNGTIFL----------A----------GPPLVKA-ATGEEVSAEDLGGADVHC  267 (569)
T ss_pred             EEEEeCCCChHHHHHHHhCCceEEecCCcEEEe----------c----------CHHHHHh-hcCcccCHHHhCCHHHhc
Confidence            999999999999999999999999884 44433          1          2221111 34555555544     3 


Q ss_pred             -HcCccceecCCCC
Q 021410          162 -ACGLATHYSVSEK  174 (312)
Q Consensus       162 -~~Glv~~vv~~~~  174 (312)
                       ..|.+|.+++++.
T Consensus       268 ~~sGv~d~~~~de~  281 (569)
T PLN02820        268 KVSGVSDHFAQDEL  281 (569)
T ss_pred             ccccccccccCchH
Confidence             3788888887654

>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]

Probab=95.93  E-value=0.054  Score=47.49  Aligned_cols=135  Identities=13%  Similarity=0.144  Sum_probs=85.8

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      +|..-.=..+.++++.+-.+. +.+|+++.+|+     +-..+-        .-.+.++. .....+..+.....|.|+.
T Consensus       137 SmGsVvGeki~ra~E~A~e~k-~P~v~f~aSGG-----ARMQEg--------~lSLMQMa-ktsaAl~~l~ea~lpyIsV  201 (294)
T COG0777         137 SMGSVVGEKITRAIERAIEDK-LPLVLFSASGG-----ARMQEG--------ILSLMQMA-KTSAALKRLSEAGLPYISV  201 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHhC-CCEEEEecCcc-----hhHhHH--------HHHHHHHH-HHHHHHHHHHhcCCceEEE
Confidence            445555567788888777653 78898888653     333221        11112222 2334556677889999999


Q ss_pred             Eccceecc-cceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCccceec
Q 021410           92 LNGVTMGG-GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS  170 (312)
Q Consensus        92 v~G~a~Gg-G~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv  170 (312)
                      +..+..|| -..+++..|+.||.++|.+|+.--++               +-....+-+-.| .=+++-.++.|+||.||
T Consensus       202 Lt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV---------------IEQTire~LPeg-fQ~aEfLlehG~iD~iv  265 (294)
T COG0777         202 LTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV---------------IEQTIREKLPEG-FQTAEFLLEHGMIDMIV  265 (294)
T ss_pred             ecCCCccchhHhHHhccCeeecCcccccccCcchh---------------hhhhhcccCCcc-hhhHHHHHHcCCceeee
Confidence            99999988 57799999999999888777643331               111111111111 11456678999999999


Q ss_pred             CCCChhH
Q 021410          171 VSEKLPL  177 (312)
Q Consensus       171 ~~~~l~~  177 (312)
                      +..++..
T Consensus       266 ~R~elr~  272 (294)
T COG0777         266 HRDELRT  272 (294)
T ss_pred             cHHHHHH
Confidence            9877654

>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]

Probab=95.33  E-value=0.072  Score=46.21  Aligned_cols=132  Identities=11%  Similarity=0.042  Sum_probs=71.9

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      +|.++-+.+...|-.++.+++-|=|.+.=+    |.|+++..                   ...++..|..++-||=..+
T Consensus       101 Idd~va~~viaqlL~Ld~ed~~K~I~lyIN----SPGG~vta-------------------glAIYDtMq~ik~~V~Tic  157 (275)
T KOG0840|consen  101 IDDDVANLVIAQLLYLDSEDPKKPIYLYIN----SPGGSVTA-------------------GLAIYDTMQYIKPDVSTIC  157 (275)
T ss_pred             CcHHHHHHHHHHHHHhhccCCCCCeEEEEe----CCCCccch-------------------hhhHHHHHHhhCCCceeee
Confidence            677777888777777777666666655443    44554421                   1123334445555555555


Q ss_pred             ccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHH------------HHhcCC-------
Q 021410           93 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF------------LALTGA-------  153 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~------------l~ltg~-------  153 (312)
                      =|.|.+-|.-|..+     .+++-+|++|..++=+--+.|++.=-..=+-..+++            .--||+       
T Consensus       158 ~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~~  232 (275)
T KOG0840|consen  158 VGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIEK  232 (275)
T ss_pred             hhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHh
Confidence            56666655444332     244566777777665532222211000000000222            122454       


Q ss_pred             ------CCCHHHHHHcCccceecCC
Q 021410          154 ------KLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       154 ------~i~a~eA~~~Glv~~vv~~  172 (312)
                            .++|+||.++||+|+|++.
T Consensus       233 d~dRd~fmsa~EA~eyGliD~v~~~  257 (275)
T KOG0840|consen  233 DMDRDRFMSAEEAKEYGLIDKVIDH  257 (275)
T ss_pred             hhcccccCCHHHHHHhcchhhhhcC
Confidence                  4899999999999999863

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=95.24  E-value=0.088  Score=51.18  Aligned_cols=154  Identities=19%  Similarity=0.213  Sum_probs=89.8

Q ss_pred             EEecCCCCCC-CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            2 AILNRPSALN-ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         2 itln~p~~~N-al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      |.=|+|.... +++++-.....+.++.++. .++-+|.|.-. ..|..|-.             .+.....+..-+++..
T Consensus       298 iian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga~~~~a  362 (493)
T PF01039_consen  298 IIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGARLLYA  362 (493)
T ss_dssp             EEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHHHHHHH
T ss_pred             EEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHHHHHHH
Confidence            3446665322 6999999999999999887 45777777653 23333321             1222345566788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCC----CeEEEeCceeEecCCCcccccCCCchHHHhhhcC-------h--HHH--
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPG----TFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-------G--HLG--  145 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~----D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-------g--~~a--  145 (312)
                      +..+.+|+|..|-|.+.|||.......    |+++|.++++       +|++++-++...+.+.-       |  ..+  
T Consensus       363 ~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~-------~~vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~  435 (493)
T PF01039_consen  363 LAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAE-------IGVMGPEGAASILYRDELEAAEAEGADPEAQR  435 (493)
T ss_dssp             HHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-E-------EESS-HHHHHHHHTHHHHHHSCHCCHSHHHHH
T ss_pred             HHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcce-------eeecChhhhheeeehhhhhhhhcccchhHHHH
Confidence            999999999999999999876444333    6665555554       45554444443333211       0  000  


Q ss_pred             -HHHH-hcCCCCCHHHHHHcCccceecCCCChhH
Q 021410          146 -EFLA-LTGAKLNGAEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       146 -~~l~-ltg~~i~a~eA~~~Glv~~vv~~~~l~~  177 (312)
                       ..+- +.-...++..+...|++|.++++.+...
T Consensus       436 ~~~~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~  469 (493)
T PF01039_consen  436 AEKIAEYEDELSSPYRAASRGYVDDIIDPAETRK  469 (493)
T ss_dssp             HHHHHHHHHHHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred             HHHHHHHHHhcCCHHHHHhcCCCCCccCHHHHHH
Confidence             0110 1112247889999999999999988754

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=94.97  E-value=0.35  Score=47.66  Aligned_cols=144  Identities=14%  Similarity=0.085  Sum_probs=91.5

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      -+++.+-.....+.++.+++ -++-+|.|.-.++ |..|.+-.             .....+...+++..+....+|.|+
T Consensus       380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~pG-f~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~is  444 (569)
T PLN02820        380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNITG-FMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKIT  444 (569)
T ss_pred             CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECCC-CCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEE
Confidence            35777888888888888775 4566666654322 44443322             123456667888889999999999


Q ss_pred             EEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-C------------hHH-H-HH-H-H
Q 021410           91 ILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------------GHL-G-EF-L-A  149 (312)
Q Consensus        91 av~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~------------g~~-a-~~-l-~  149 (312)
                      .|-|.+.|+|..-..    ..|++++.       |...+|..++-++...+.+. +            -.. + .+ + -
T Consensus       445 vi~g~a~G~g~~aM~g~~~~~d~~~aw-------p~A~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  517 (569)
T PLN02820        445 IIVGGSFGAGNYGMCGRAYSPNFLFMW-------PNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE  517 (569)
T ss_pred             EEECCcchHHHHHhcCcCCCCCEEEEC-------CCCeEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence            999999998654333    45665555       55566776666555545431 1            000 0 00 0 1


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCChh
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      ..-+..++..|-+.|+||.|+++.+..
T Consensus       518 ~~~~~~~p~~aa~~~~vD~VIdP~dTR  544 (569)
T PLN02820        518 AYEREANPYYSTARLWDDGVIDPADTR  544 (569)
T ss_pred             HHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence            122245777888999999999987754

>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]

Probab=94.45  E-value=0.11  Score=50.18  Aligned_cols=94  Identities=13%  Similarity=0.058  Sum_probs=59.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCC
Q 021410            7 PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK   86 (312)
Q Consensus         7 p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k   86 (312)
                      +.+.-++.+-....+.++.+.+..+..-.+.+..|      .|+.+.+=.        .....+-+ ++.-...+... +
T Consensus       101 TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~ds------gGari~~~v--------~~l~g~g~-iF~~~a~~Sg~-I  164 (526)
T COG4799         101 TVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDS------GGARIQEGV--------PSLAGYGR-IFYRNARASGV-I  164 (526)
T ss_pred             ceecccccccccchHHHHHHHHHHcCCCEEEEEcc------cccccccCc--------cccccchH-HHHHHHHhccC-C
Confidence            33556666666777777777777655433444433      455554211        11111211 11222234444 9


Q ss_pred             cEEEEEccceecccceeecCCCeEEEeCce
Q 021410           87 PHVAILNGVTMGGGAGVSIPGTFRVACGKT  116 (312)
Q Consensus        87 p~Iaav~G~a~GgG~~lal~~D~~ia~~~a  116 (312)
                      |.|++|-|.|.|||..+...||++|+.++.
T Consensus       165 PqIsvv~G~c~gGgaY~pal~D~~imv~~~  194 (526)
T COG4799         165 PQISVVMGPCAGGGAYSPALTDFVIMVRDQ  194 (526)
T ss_pred             CEEEEEEecCcccccccccccceEEEEcCC
Confidence            999999999999999999999999999985

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=91.30  E-value=0.37  Score=45.46  Aligned_cols=59  Identities=14%  Similarity=0.105  Sum_probs=47.6

Q ss_pred             HHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee---eccC
Q 021410          248 STLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ---ILNK  310 (312)
Q Consensus       248 ~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~---l~~r  310 (312)
                      +.+++++..+|.++..+|+.++... ....+.+..|...+..++.   ++|+.|++.+|   +++|
T Consensus       228 ~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f~---~~d~~ei~~al~~~~~kr  289 (401)
T PLN02157        228 EQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCFS---HDTVEEIIDSLEIEAGRR  289 (401)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHhc---CCCHHHHHHHHHhhhccc
Confidence            3477888889999999999998652 4456777778888888887   99999999999   6554

>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]

Probab=87.47  E-value=8.9  Score=37.34  Aligned_cols=155  Identities=15%  Similarity=0.134  Sum_probs=97.7

Q ss_pred             ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      =|+|. ..-+|+.+--..-.+.++.... .++-.|.|.-. ..|..|-|-..             ....+...+++.++.
T Consensus       330 ANqp~~~~G~l~~~sa~KaArFI~~cd~-~~iPlv~L~d~-pGFm~G~~~E~-------------~giik~Gakl~~A~a  394 (526)
T COG4799         330 ANQPRHLGGVLDIDSADKAARFIRLCDA-FNIPLVFLVDT-PGFMPGTDQEY-------------GGIIKHGAKLLYAVA  394 (526)
T ss_pred             ecCccccccccchHHHHHHHHHHHhhhc-cCCCeEEEeCC-CCCCCChhHHh-------------ChHHHhhhHHHhhHh
Confidence            45565 3456888888888888855443 34666655432 55887766432             234555668889999


Q ss_pred             hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh-cChHH---HH---------HHH
Q 021410           83 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL---GE---------FLA  149 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g~~---a~---------~l~  149 (312)
                      +..+|.|..|-|.+.|||......-.+-   .+-.|..|..++|+.-+-|+.-.+.+ .+...   ..         .--
T Consensus       395 eatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~~e  471 (526)
T COG4799         395 EATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQLIAE  471 (526)
T ss_pred             hccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHH
Confidence            9999999999999999987655443332   55666677777777654454444433 22110   00         001


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCChh
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      +.-+..++--|.+.|++|.|+++.+..
T Consensus       472 Y~~~~~~p~~aa~r~~iD~vI~p~~tR  498 (526)
T COG4799         472 YEEQFSNPYYAAERGYIDAVIDPADTR  498 (526)
T ss_pred             HHHhccchHHHHHhCCCCcccCHHHHH
Confidence            122234566777899999999887643

>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]

Probab=81.28  E-value=5.3  Score=35.59  Aligned_cols=53  Identities=28%  Similarity=0.449  Sum_probs=35.6

Q ss_pred             HHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEcccee
Q 021410           21 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM   97 (312)
Q Consensus        21 L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~   97 (312)
                      +.++|+.+++||+.++||+-|.     -|.+-.+           ...+|       +.. ....||||+.+-|.+.
T Consensus       188 fid~L~~fe~Dp~T~~ivmiGE-----iGG~aEe-----------~AA~~-------i~~-~~~~KPVVa~iaG~ta  240 (293)
T COG0074         188 FIDALEMFEADPETEAIVMIGE-----IGGPAEE-----------EAAEY-------IKA-NATRKPVVAYIAGRTA  240 (293)
T ss_pred             HHHHHHHHhcCccccEEEEEec-----CCCcHHH-----------HHHHH-------HHH-hccCCCEEEEEeccCC
Confidence            4578889999999999999997     2333221           12222       222 2345999999999865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	312
3bpt_A	363	Crystal Structure Of Human Beta-Hydroxyisobutyryl-C		4e-54
4hdt_A	353	Crystal Structure Of A Carnitinyl-Coa Dehydratase F		4e-38
4j2u_A	365	Crystal Structure Of An Enoyl-coa Hydratase From Rh		6e-29
3ju1_A	407	Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F		3e-24
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		4e-16
2ej5_A	257	Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr		2e-14
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		2e-14
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		2e-14
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		3e-14
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		9e-14
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		1e-13
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		1e-13
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-13
2pbp_A	258	Crystal Structure Of Enoyl-Coa Hydrates Subunit I (		3e-13
3moy_A	263	Crystal Structure Of Probable Enoyl-Coa Hydratase F		1e-12
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		3e-12
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		2e-11
3qmj_A	256	Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr		4e-11
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		8e-11
2vsu_E	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		8e-11
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		9e-11
2j5i_A	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2vsu_C	275	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2vsu_A	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2vsu_F	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		1e-10
2j5i_B	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-10
2vss_E	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		1e-10
2j5i_I	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-10
2vss_F	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		1e-10
3rrv_A	276	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		3e-10
3rsi_A	265	The Structure Of A Putative Enoyl-Coa HydrataseISOM		3e-10
4fzw_A	258	Crystal Structure Of The Paaf-paag Hydratase-isomer		3e-09
3tlf_A	274	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		8e-09
1uiy_A	253	Crystal Structure Of Enoyl-Coa Hydratase From Therm		1e-08
2f6q_A	280	The Crystal Structure Of Human Peroxisomal Delta3,		1e-08
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		2e-08
4f47_A	278	The Structure Of Enoyl-Coa Hydratase Echa19 From My		5e-08
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		7e-08
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		7e-08
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		8e-08
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		1e-07
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		1e-07
4fzw_C	274	Crystal Structure Of The Paaf-paag Hydratase-isomer		2e-07
3pea_A	261	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		2e-07
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		1e-06
3lke_A	263	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		1e-06
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		1e-06
1nzy_A	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		1e-06
1nzy_B	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		1e-06
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		2e-06
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		2e-06
1jxz_A	269	Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe		3e-06
3myb_A	286	Crystal Structure Of Enoyl-Coa Hydratase Mycobacter		3e-06
3pe8_A	256	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		3e-06
3oc7_A	267	Crystal Structure Of An Enoyl-Coa Hydratase From My		3e-06
3he2_A	264	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		3e-06
3fdu_A	266	Crystal Structure Of A Putative Enoyl-Coa Hydratase		4e-06
3ome_A	282	Crystal Structure Of A Probable Enoyl-Coa Hydratase		4e-05
3hin_A	275	Crystal Structure Of Putative Enoyl-Coa Hydratase F		4e-05
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		7e-05
3g64_A	279	Crystal Structure Of Putative Enoyl-Coa Hydratase F		1e-04
3i47_A	268	Crystal Structure Of Putative Enoyl Coa HydrataseIS		2e-04
2vx2_A	287	Crystal Structure Of Human Enoyl Coenzyme A Hydrata		2e-04
3trr_A	256	Crystal Structure Of A Probable Enoyl-Coa Hydratase		6e-04
1wdk_A	715	Fatty Acid Beta-Oxidation Multienzyme Complex From		8e-04

>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363

Iteration: 1
 Score =  207 bits (528), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 12/302 (3%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP  LNAL  N   ++    K WE DP    + +KG+G +AFCAGGDI  +     + 
Sbjct: 21  LNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISE-AEKA 79
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           K +    FFR  Y     +G+  KP+VA+++G+T GGG G+S+ G FRVA  K +FA PE
Sbjct: 80  KQKIAPVFFREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPE 139
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
           T IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL  +EE+L
Sbjct: 140 TAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAXLEEDL 199
Query: 183 GKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEAS 239
             L +     I + LE Y     +  DK+ ++    D ++ CF  +TVEEII++L+ + S
Sbjct: 200 LALKSPSKENIASVLENYHTESKIDRDKSFILEEHXDKINSCFSANTVEEIIENLQQDGS 259
Query: 240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDF 299
                +    L+++ + SP SLK++LR + EG  +T  E L  EYR+S Q   R    DF
Sbjct: 260 ----SFALEQLKVINKXSPTSLKITLRQLXEGSSKTLQEVLTXEYRLS-QACXR--GHDF 312
Query: 300 YE 301
           +E
Sbjct: 313 HE 314

>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353

Iteration: 1
 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 166/309 (53%), Gaps = 18/309 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNRP A+N+L   M   + +   AWEND ++  V + G+G R  CAGGD+V++YH   + 
Sbjct: 24  LNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSA-KA 82
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
              E + F+   Y     +G + KP+V+I++G+ MGGG GV   G  RV    T  A PE
Sbjct: 83  DGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPE 142
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             IGF PD G ++ LS  PG LG   ALTGA  +GA+ +  G A HY   +K+    +E 
Sbjct: 143 VGIGFIPDVGGTYLLSRAPGKLGLHAALTGAPFSGADAIVMGFADHYVPHDKI----DEF 198
Query: 183 GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLIN 242
            + V  D   ++A L  ++    P  + +  +   +D+C+  DTV +II +L +     +
Sbjct: 199 TRAVIADG--VDAALAAHAQ--EPPASPLAEQRSWIDECYTGDTVADIIAALRAH----D 250
Query: 243 DPWCGSTLRLLKEASPLSLKVSLRSIRE-GRFQTFDECLVREYRMSLQGVSRLISGDFYE 301
            P  G    L+   SP++L V+L S+R   + Q+ ++ L +EYR+S    + L S D  E
Sbjct: 251 APAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVS---CASLKSHDLVE 307
Query: 302 VSNFQILNK 310
               Q+++K
Sbjct: 308 GIRAQLVDK 316

>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365

Iteration: 1
 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 142/313 (45%), Gaps = 30/313 (9%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           L+RP+ALNAL      +++   + W  DP +  V +   G RAFCAGGDI  L+     G
Sbjct: 39  LSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRAFCAGGDIAELHGRGVAG 98
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                +DF+R  Y     +    KP V++  G T GGG G+      R+    +  + PE
Sbjct: 99  DHAFGQDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGGGVGLGCHARHRIVGETSQISXPE 158
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             IG  PD G +  L+  PG +G +L LTGA+    + +  G A  + V E         
Sbjct: 159 CAIGLVPDVGGTHLLARAPGRIGVWLGLTGARXGPGDAIFAGFADRF-VPE--------- 208
Query: 183 GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI----DIVDKCFGLDTVEEIIDSLESEA 238
                D P +I A LE   DL  PD  +   R+    D +D+ F   T+ EI   LE+  
Sbjct: 209 ----ADWPDLI-AALEG-GDLALPDHAAPEGRLPVLQDEIDRLFA-GTLAEIPARLEA-- 259
Query: 239 SLINDPWCGSTLRLLKEASPLSLKVSLRSI-REGRFQTFDECLVREYRMSLQGVSRLISG 297
              + P     L+ L+ +SPL+L  +L  + R G      E L  EYR + +   +    
Sbjct: 260 --TDTPLAAEALKALRRSSPLALAATLEILQRLGPSAGIREALDLEYRFTYRAQGQ---A 314
Query: 298 DFYEVSNFQILNK 310
           DF E     I++K
Sbjct: 315 DFLEGIRAAIIDK 327

>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 142/316 (44%), Gaps = 25/316 (7%)
Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH-- 57
           +  LN   ALNAL+ +           W+ DP I  V + GSG +AFCAGGD+ +LYH  
Sbjct: 54  VVTLNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHAS 113
Query: 58  FMNQGKLEE-CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
              +G++ E  K FF   Y   YLL T+ KP +   +G+  GGG G+    + +V    +
Sbjct: 114 VAAKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVXGGGLGLXAGASHKVVTETS 173
Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLP 176
             A PE  IG +PD G S++L+  PG  G FL LT    N A+    GLA HY   +   
Sbjct: 174 RIAXPEVTIGLYPDVGGSYFLNRXPGKXGLFLGLTAYHXNAADACYVGLADHYLNRDDKE 233
Query: 177 LIEEELGKL-VTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE 235
           L  +    L  +D P++    L+          N + +++DI      L   +E ID L 
Sbjct: 234 LXFDAXATLDWSDSPALNHQRLDTXI-------NELSNQVDIPKGDSVLAESQEXIDRLX 286
Query: 236 S---------EASLIND-PWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR 285
           +          ++L  D  W           SP+S  ++    + G   +  +C   E  
Sbjct: 287 AGSLTDIVTRXSTLSTDEAWLSKACATXLAGSPISWHLAYIQTQLGTKLSLAQCFKWELT 346
Query: 286 MSLQGVSRLISGDFYE 301
           +S+   ++   GDF E
Sbjct: 347 VSVNVCAK---GDFCE 359

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  K +E DP +G + + G  +AF AG DI  + +      
Sbjct: 48  LNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLS---- 103
Query: 64  LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
                  F+  YS  +L     L    KP +A +NG   GGG  +++      A  K  F
Sbjct: 104 -------FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQF 156
Query: 119 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 177
           A PE LIG  P AG +  L+   G  L   + LTG +++  +    GL +     E   L
Sbjct: 157 AQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE--TL 214
Query: 178 IEEEL 182
           +EE +
Sbjct: 215 VEEAI 219

>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNA    M A++ K  K    DPN+  V + G+GRAFCAG D+  +   M+ G 
Sbjct: 18  LNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHG- 76
Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                D  R+ Y+ +     HL KP VA +NG   G G  +++   FR+   K  FA   
Sbjct: 77  -----DVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAF 131
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLN 156
             +G  PDAG  +YL  L G      LA+ G K+ 
Sbjct: 132 IHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVT 166

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 20  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 75
Query: 64  LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 76  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 128
Query: 119 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 176
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 129 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 183
Query: 177 --LIEEEL 182
             L+EE +
Sbjct: 184 ETLVEEAI 191

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 77
Query: 64  LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 78  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 130
Query: 119 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 176
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 131 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 185
Query: 177 --LIEEEL 182
             L+EE +
Sbjct: 186 ETLVEEAI 193

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 23  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 78
Query: 64  LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 79  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 131
Query: 119 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 176
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 132 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 186
Query: 177 --LIEEEL 182
             L+EE +
Sbjct: 187 ETLVEEAI 194

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNA+   +   L    K  E D  +  + + G+GRAF AG D   L  F ++  
Sbjct: 15  LNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQD---LTEFGDRKP 71
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             + +   R     +  L    KP V  +NGV  G G  +++ G  R+A     F T   
Sbjct: 72  --DYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFV 129
Query: 124 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            IG  PD+G SF L  L G    + L L   +L+  E +A GL      +EK  L+EE L
Sbjct: 130 RIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEK--LMEEAL 187

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG DI  +        
Sbjct: 19  LNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADA 78
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DFF T       L     P +A + G  +GGG  +++     +A     F  PE 
Sbjct: 79  F--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEI 132
Query: 124 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 175
            +G  P  G S  L+   G      L LTG  ++ AE    GL +    ++ L
Sbjct: 133 KLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 185

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG DI  +        
Sbjct: 20  LNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADA 79
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DFF T       L     P +A + G  +GGG  +++     +A     F  PE 
Sbjct: 80  F--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEI 133
Query: 124 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 175
            +G  P  G S  L+   G      L LTG  ++ AE    GL +    ++ L
Sbjct: 134 KLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 186

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG DI  +        
Sbjct: 40  LNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADA 99
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DFF T       L     P +A + G  +GGG  +++     +A     F  PE 
Sbjct: 100 F--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEI 153
Query: 124 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKL 175
            +G  P  G S  L+   G      L LTG  ++ AE    GL +    ++ L
Sbjct: 154 KLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL 206

>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP  LNAL+  M A++    +A++ +  +  + + G GRAF AG DI  +    +  +
Sbjct: 20  LARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKD-DPIR 78
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           LE    F    +  + ++ T   P +A +NG+ +GGG  +++     VA     F  PE 
Sbjct: 79  LEWLNQF--ADWDRLSIVKT---PMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEV 133
Query: 124 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
            +G  P AG +  L+ L  P    E+L  TGA+++  E    G+     VS +L L+EE 
Sbjct: 134 NLGVMPGAGGTQRLTKLIGPKRALEWL-WTGARMSAKEAEQLGIVNRV-VSPEL-LMEET 190
Query: 182 L---GKLVTDDP---SVIEACLEKYSDLVYP 206
           +   G+L    P    +I+  ++K  D  YP
Sbjct: 191 MRLAGRLAEQPPLALRLIKEAVQKAVD--YP 219

>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 20/233 (8%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP ALNALN  + A++    + ++ D  IG + + GS RAF AG DI  +        
Sbjct: 25  LDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQA 84
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            E      R L S    L    KP VA + G  +GGG  +++     +A     F  PE 
Sbjct: 85  RE------RNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEI 138
Query: 124 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH-----------YSV 171
            +G  P  G +  L+   G      L LTG  L   E    GL +             +V
Sbjct: 139 TLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAV 198
Query: 172 SEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 224
           ++++  +    G+ V D  ++ EA     S  +  ++++     D  D+  G+
Sbjct: 199 AQRIARMSRPAGRAVKD--AINEAFERPLSAGMRYERDAFYAMFDTHDQTEGM 249

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 26/197 (13%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           ++RP A NA+N  +   +    +  + DP +  V + G+G ++FCAG D+ ++    N  
Sbjct: 30  IDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGADLKAISRGENLY 89
Query: 63  KLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             E  +  F   ++ FI       KP +A +NG  +GGG+ +++     +AC    F  P
Sbjct: 90  HAEHPEWGFAGYVHHFID------KPTIAAVNGTALGGGSELALASDLVIACESASFGLP 143
Query: 122 ETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G    AG  F +   LP  +   L LTG  +  ++ +  GL     ++E +P    
Sbjct: 144 EVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPMTASDALRWGL-----INEVVP---- 194
Query: 181 ELGKLVTDDPSVIEACL 197
                   D +V+EA L
Sbjct: 195 --------DGTVVEAAL 203

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP  LNA++T M  +L+   +  E D ++  V + G+GRAFC+GGD   L      G 
Sbjct: 21  LDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGD---LTGGDTAGA 77
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +      R + S         KP +A ++G  +G G  +++     VA   + F    T
Sbjct: 78  ADAANRVVRAITSLP-------KPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT 130
Query: 124 LIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            +G  PD GAS  L  L G      +A+T  K++ A     G+ +H + +++   +  ++
Sbjct: 131 RVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDV 190
Query: 183 GKLVTDDPSV 192
            + V+  P++
Sbjct: 191 LRSVSGGPTL 200

>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Query: 4   LNRPSALNALNTNM-GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           LNRP ALNA N  +  A    L  A  +DP +  V + GSGR F AG D+  +   +   
Sbjct: 21  LNRPEALNAFNEALYDATAQALLDA-ADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDP 79
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
              E K  FR L   I  L    KP +  +NG+ +G GA +                 P 
Sbjct: 80  NFSEGKFGFRGL---IKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPF 136
Query: 123 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKL 175
           T +G  P+A +S+ L  L G     +L ++   ++  E +  GL       E+L
Sbjct: 137 TSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICSPEEL 190

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NRP A NA+N  +   +    +  ++DP +  V + G+G ++FCAG D+ ++    N  
Sbjct: 24  INRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY 83
Query: 63  KLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             +  +  F   +  FI       KP +A +NG  +GGG  +++     VA  +  F  P
Sbjct: 84  HPDHPEWGFAGYVRHFID------KPTIAAVNGTALGGGTELALASDLVVADERAQFGLP 137
Query: 122 ETLIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGAEMMACGL 165
           E   G    AG  F ++  LP  +   L LTG  L+ A     GL
Sbjct: 138 EVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182

>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NRP A NA+N  +   +    +  ++DP +  V + G+G ++FCAG D+ ++    N  
Sbjct: 24  INRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLY 83
Query: 63  KLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             +  +  F   +  FI       KP +A +NG  +GGG  +++     VA  +  F  P
Sbjct: 84  HPDHPEWGFAGYVRHFID------KPTIAAVNGTALGGGTELALASDLVVADERAQFGLP 137
Query: 122 ETLIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGAEMMACGL 165
           E   G    AG  F ++  LP  +   L LTG  L+ A     GL
Sbjct: 138 EVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182

>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFL-ALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G
Sbjct: 23  ILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAG 82
Query: 63  KLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   
Sbjct: 83  PEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLS 142
Query: 122 ETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           E   G  P    S  ++   GH    +  +TG    G +    GL        +L  +  
Sbjct: 143 EINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTI 202
Query: 181 ELGK-LVTDDPSVIEAC 196
           EL + L+  +P V+ A 
Sbjct: 203 ELARNLLEKNPVVLRAA 219

>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 3/168 (1%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP +LN++N ++   L +L++   +DP      + G+GRAF AGGD   L        
Sbjct: 43  LNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADAD 102
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L       R     +  +     P VA +NG  +G G  +               A P  
Sbjct: 103 LR--AKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHV 160
Query: 124 LIGF-HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 170
            +G    D G   +  H+   L +  ALTG +++    +  GLA H +
Sbjct: 161 QVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVA 208

>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP   NAL+TNM ++    +   ++D  I    + G+G A+C GGD+   +  +  G 
Sbjct: 24  MNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGW-MVRDGS 82
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                    T+   + L  T  KP +A +NG  +GGG  +      RV+     F  PE 
Sbjct: 83  APPLDPA--TIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEV 140
Query: 124 LIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGAEMMACGLATH 168
             G  P AG+   L   +P      + LTG  L   E    GL  H
Sbjct: 141 QRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGH 186

>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 15/169 (8%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP+A NALN  +  +L    +A   D +I    + G+ R F AG D+  +        
Sbjct: 20  LNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAE------ 73
Query: 64  LEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
               KD   TL      L   L    KP +A +NG  +G G  +++     VA     F 
Sbjct: 74  ----KDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFG 129
Query: 120 TPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLAT 167
            PE  +G  P AG +  L    G  L   + L+G  +   +    GL +
Sbjct: 130 LPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVS 178

>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL+ +M  +L   +   END  +  + + G+GRAFC+G D+  +      GK
Sbjct: 26  LNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEI---PEDGK 82
Query: 64  LEECKDFFRTLYSF------IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 117
           +   + +  T   +           T  KP +  +NG+  G G          +A  +  
Sbjct: 83  VIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQAT 142
Query: 118 FATPETLIGF 127
           F  P   IG 
Sbjct: 143 FFDPHVSIGL 152

>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 1/167 (0%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN P   N L+      L +     E DP +  V + G G+AF AG D+  L      G 
Sbjct: 14  LNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGA 73
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            E  +    +L    + + T+ KP VA +NG  + GGAG+++     V   +      E 
Sbjct: 74  EENYRHSL-SLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYTEV 132
Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 170
            IGF     +   +  +     + L LTG  +   E  A GL    +
Sbjct: 133 KIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIA 179

>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            NRP   NA+NT    ++ +  KA   D +I  V + G+G  + +G D+ +       G 
Sbjct: 41  FNRPKKKNAINTEXYHEIXRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGGV 99
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRV--ACGKTVFATP 121
            E+ K+    L  F+       KP +A++NG  +  G  V++ G F    A  +  F TP
Sbjct: 100 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAV--GISVTLLGLFDAVYASDRATFHTP 157
Query: 122 ETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 168
            + +G  P+  +S+    +  P    E L + G KL   E  A GL T 
Sbjct: 158 FSHLGQSPEGCSSYTFPKIXSPAKATEXL-IFGKKLTAGEACAQGLVTE 205

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNR    N+L+  +  +L  +      + N   V + G+G +AFCAG D+       N+ 
Sbjct: 24  LNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKE-RAGXNEE 82
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           ++       RT    +  L    +P +A +NG+ +GGG  +S+   FR+A         E
Sbjct: 83  QVRHAVSXIRTTXEXVEQLP---QPVIAAINGIALGGGTELSLACDFRIAAESASLGLTE 139
Query: 123 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH----YSVSEKLPL 177
           T +   P AG +  L  L G    + L  TG +++  E    GL       + + EK   
Sbjct: 140 TTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIE 199
Query: 178 IEEELGKLVTDDPSVIEACLEKYSDLVYPD 207
           I E   K+ ++ P  +    E  S+ +  D
Sbjct: 200 IAE---KIASNGPIAVRLAKEAISNGIQVD 226

>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWE---NDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +NRPS  NAL+  M   +  + +AW+   NDP+I    + G+G  FCAG D   L     
Sbjct: 35  MNRPSRRNALSGEM---MQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMD---LKAATK 88
Query: 61  QGKLEECKDFFRTLYSFIYLL-GTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
           +   +  KD          LL G  L KP +A + G  + GG  +      RVA     F
Sbjct: 89  KPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKF 148
Query: 119 ATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATH 168
              E     +P  G++  L   +P  +   L LTG  +  AE    GL  H
Sbjct: 149 GISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGH 199

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP+  NA+N     ++ + F     D +   V + G+G+ F AG D++ +   + Q K
Sbjct: 46  LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPK 105
Query: 64  LEEC-------KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
            ++        +D          ++    KP +A ++G  +GGG  +      R      
Sbjct: 106 GDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 165
Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLGEF-----LALTGAKLNGAEMMACGLATH 168
            F   E  +G   D G    L  LP  +G       LA T  K+   E +  GL + 
Sbjct: 166 FFQVKEVDVGLAADVGT---LQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR 219

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 86/223 (38%), Gaps = 27/223 (12%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NAL+  +  +        E D ++  V + G+   FCAG D   L        
Sbjct: 23  LNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLD---LKELGGSSA 79
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L +    +  L           KP +  +NG  + GG  +++     +A     FA    
Sbjct: 80  LPDISPRWPALT----------KPVIGAINGAAVTGGLELALYCDILIASENARFADTHA 129
Query: 124 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            +G  P  G S  L    G  L   ++LTG  L+ A+ +  GL T     ++L    + +
Sbjct: 130 RVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAAQAV 189
Query: 183 -GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 224
              +V ++ + + A L  Y            HRID      GL
Sbjct: 190 AASIVGNNQNAVRALLASY------------HRIDDAQTSAGL 220

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ PS  N+    +G +L   ++  ++DP +  + + G+  AFC+G  I +        +
Sbjct: 22  LHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR 81
Query: 64  LEECKDFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                DF  + +    + L T   P +A +NG  +G G  +++    R+   +  +A P+
Sbjct: 82  ---NPDFSASPVQPAAFELRT---PVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQ 135
Query: 123 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLA 166
              G  PDA A + L  L G  +   L LTGA  +    +  GLA
Sbjct: 136 VRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLA 180

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +  LNRP  +NA+  ++     ++     +D ++  V + G+G+ FC+G D  S     +
Sbjct: 36  LVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPH 95
Query: 61  QGKLEECKDFFRT---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 117
            G L +     R+   L   I  L    +P +A +NG  +GGG  +++    RVA     
Sbjct: 96  IGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAY 155
Query: 118 FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATHYSVSE 173
           F       G         YL  LP  +G   A    LTG  ++  E    GL +    SE
Sbjct: 156 FRAAGINNGLTASELGLSYL--LPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKVASE 213
Query: 174 KL 175
            L
Sbjct: 214 SL 215

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 27/223 (12%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NAL+  +  +        E D ++  V + G+   FCAG D   L        
Sbjct: 40  LNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLD---LKELGGSSA 96
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L +    +  L           KP +  +NG  + GG  +++     +A     FA    
Sbjct: 97  LPDISPRWPALT----------KPVIGAINGAAVTGGLELALYCDILIASENARFADTHA 146
Query: 124 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            +G  P  G S  L    G  L   ++LTG  L+ A+ +  GL T     ++L      +
Sbjct: 147 RVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAV 206
Query: 183 -GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 224
              +V ++ + + A L  Y            HRID      GL
Sbjct: 207 AASIVGNNQNAVRALLTSY------------HRIDDAQTSAGL 237

>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LN+ N  M A+L +  K  E D  I  + + G+GR FCAG D+    +  N   
Sbjct: 30  LNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDL----NDRNVDP 85
Query: 64  LEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
                D   ++  F   L   L    KP +  +NGV  G GA +++ G   +A     F 
Sbjct: 86  TGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFV 145
Query: 120 TPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLI 178
              + +G  PD G ++ L  + G      LAL G +L+  +    G+       E L   
Sbjct: 146 MAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADT 205
Query: 179 EEELGKLVTDDPS 191
            ++L + +   P+
Sbjct: 206 AQQLARHLATQPT 218

>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 20/207 (9%)
Query: 1   MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +A LN   A NA ++ +   + +L    E D NI  V + G GR F AG DI        
Sbjct: 18  VATLNHAPA-NAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTE 76
Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
             +  E     +  +  +       KP +A ++G  +GGG   +     R A        
Sbjct: 77  AKQATELAQLGQVTFERVEKCS---KPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGL 133
Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL-----ATHYSV 171
           PE  +G  P    +     LP ++G+  A    LT   + GAE +  GL     A    +
Sbjct: 134 PELTLGLIPGFAGT---QRLPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFL 190
Query: 172 SEKLPLIEEELGKLVTDDPSVIEACLE 198
            + L + ++  GK     P+   A LE
Sbjct: 191 DDTLKVAKQIAGK----SPATARAVLE 213

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 15/177 (8%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78
Query: 64  LEEC-------KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
            ++        +D          ++    KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138
Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLGEF-----LALTGAKLNGAEMMACGLATH 168
            F   E  +G   D G    L  LP  +G       L  T  K+   E +  GL + 
Sbjct: 139 FFQVKEVDVGLAADVGT---LQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSR 192

>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Halodurans Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQG 62
           L+ P   N L+  +G  L +  +A  N+ +I  + ++   RA F +G  +  L    +  
Sbjct: 19  LDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ 78
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                ++    L   +  + T  K  VA++NG   GGG  + +    R+A  +  F    
Sbjct: 79  SDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENF 138
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 165
             +G  PD GAS++L  + G+     L L G      E +  GL
Sbjct: 139 HKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGL 182

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQG 62
           +NRP   NA      A++   F    +D N+  + + G G  AFC+GGD     H    G
Sbjct: 28  INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG 87
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           + +  +     L   I ++    KP +A++ G  +GGG  +++     +A    +F    
Sbjct: 88  EDQIPRLNVLDLQRLIRIIP---KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTG 144
Query: 123 TLIGFHPDAGASFYLSHLPGH 143
             +G       S YL+ + GH
Sbjct: 145 PKVGSFDAGYGSGYLARIVGH 165

>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 8/193 (4%)
Query: 7   PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 66
           P   NAL+     ++       E D ++G V + G+  AFCAG  +  +   +++G +  
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIP--LDKG-VAG 77
Query: 67  CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
            +D FR      +  I+ +    +P +A +NGV  GGG G+S+     +      F    
Sbjct: 78  VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
             IG   D   S+ L+ + G      L LT   L   E    GL +     ++   +  +
Sbjct: 138 HTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWK 197
Query: 182 LGKLVTDDPSVIE 194
           + + +   P+ ++
Sbjct: 198 VARELAAAPTHLQ 210

>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 7   PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 66
           P   NAL+     ++       E D ++G V + G+  AFCAG  +  +   +++G +  
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIP--LDKG-VAG 77
Query: 67  CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
            +D FR      +  I+ +    +P +A +NGV  GGG G+S+     +      F    
Sbjct: 78  VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 123 TLIGFHPDAGASFYLSHLPG 142
             IG   D   S+ L+ + G
Sbjct: 138 HTIGIGNDTATSYSLARIVG 157

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI-------VSL 55
           I+NRP A NA+N    A L   F  ++ D +     + G+G  FCAG D+        + 
Sbjct: 22  IINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTFCAGADLKAFGTAEANA 81
Query: 56  YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 115
            H    G +   +                 KP +A ++G  + GG  +++    RVA   
Sbjct: 82  VHRTGPGPMGPSRMMLS-------------KPVIAAVSGYAVAGGLELALWCDLRVAEQD 128
Query: 116 TVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH 168
            VF       G     G +  L  L GH     + LTG  +   E +A GLA  
Sbjct: 129 AVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAVQADEALAIGLANR 182

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NRP   NA       ++   F    +D NIG + + G+G +AFC+GGD     H    G
Sbjct: 27  INRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVG 86
Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           + E  +     L   I ++    KP +A++ G  +GGG  + +     +A    +F    
Sbjct: 87  EDEIPRLNVLDLQRLIRVI---PKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTG 143
Query: 123 TLIGFHPDAGASFYLSHLPGH 143
             +G       + YL+ + GH
Sbjct: 144 PKVGSFDGGYGAGYLARIVGH 164

>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 8/193 (4%)
Query: 7   PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 66
           P   NAL+     ++       E D ++G V + G+  AFCAG  +  +   +++G +  
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIP--LDKG-VAG 77
Query: 67  CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
            +D FR         I+ +    +P +A +NGV  GGG G+S+     +      F    
Sbjct: 78  VRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137
Query: 123 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
             IG   D   S+ L+ + G      L LT   L   E    GL +     ++   +  +
Sbjct: 138 HTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWK 197
Query: 182 LGKLVTDDPSVIE 194
           + + +   P+ ++
Sbjct: 198 VARELAAAPTHLQ 210

>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NAL+  M A L + F     D ++  V +  SG+AFCAG       H + + +
Sbjct: 41  LNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAG-------HDLKEMR 93
Query: 64  LEECKDFFRTLYS----FIYLLGTHLKPHVAILNGVTMGGG 100
            E  ++++  L++     +  +     P +A ++G+    G
Sbjct: 94  AEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAG 134

>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 83/215 (38%), Gaps = 27/215 (12%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP + NAL+  + +   +     +ND ++  V + G+   FCAG D+  L      G 
Sbjct: 24  LNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL------GD 77
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E  D                KP +  +NG  + GG  +++     +A     FA    
Sbjct: 78  TTELPDISPKWPDMT-------KPVIGAINGAAVTGGLELALYCDILIASENAKFADTHA 130
Query: 124 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
            +G  P  G S  L    G  L   ++LTG  L+  + +  GL T     + L      +
Sbjct: 131 RVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRV 190
Query: 183 -GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 216
              +V ++   + A L+ Y            HRID
Sbjct: 191 AASIVGNNQKAVRALLDSY------------HRID 213

>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN P   NAL+T + ++L++  +   +DP +  V +  +G  FCAG D   L    + G 
Sbjct: 26  LNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGAD---LSEAGSGGS 82
Query: 64  LEECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
                D      R + + +  +     P +A ++G    GG G+       VA  ++ FA
Sbjct: 83  PSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFA 142
Query: 120 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 179
             E  IG  P   +   L  L         LTG K +       GL T    +E L   +
Sbjct: 143 LTEARIGVAPAIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLITM--AAEDL---D 197
Query: 180 EELGKLVTD 188
             + +LVTD
Sbjct: 198 AAIDQLVTD 206

>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 16/234 (6%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP   NALN+ +  +L +  +    D +   + + G G AFCAG D+ S   F     
Sbjct: 36  LQRPERRNALNSQLVEELTQAIRK-AGDGSARAIVLTGQGTAFCAGADL-SGDAF----- 88
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                D+   L      +     P V  +NG  +G G  +++    RV      F  P +
Sbjct: 89  ---AADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTS 145
Query: 124 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 182
             G   D  +   LS L GH     + L+  KL     +  G+A              E+
Sbjct: 146 KYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQAWAAEI 205
Query: 183 GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEIIDSLE 235
            +L    P  I+      +D    ++    H+ ++ DK +G  D +E  +  +E
Sbjct: 206 ARLA---PLAIQHAKRVLNDDGAIEEAWPAHK-ELFDKAWGSQDVIEAQVARME 255

>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 9/166 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM---N 60
           +NRP A NAL   +   + K     + + ++  V ++G+   F AG D+     F+   N
Sbjct: 20  INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79
Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
            G   +   F   L S   L     KP +  + GV +G G  + +      A    +F  
Sbjct: 80  AGPAGQVPPFV-LLKSAARL----SKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQI 134
Query: 121 PETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGL 165
           P   +G  P+ GAS  L    G H    L  T  K N    +  GL
Sbjct: 135 PFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGL 180

>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 72/192 (37%), Gaps = 10/192 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NA N  +  +L+  +     D  +  + ++ +G+ F AG D+        +  
Sbjct: 38  LNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLRGGGEVPEKIS 97
Query: 64  LE-ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           LE   +   R    +        KP +A + G  + GG  +  P    +A    +F+ P 
Sbjct: 98  LEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLILASDDALFSDPV 157
Query: 123 TLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI 178
            L+G     G   Y  H     P    E L  TG  L   E    G+       ++L   
Sbjct: 158 ALMGI----GGVEYHGHTWELGPRKAKEIL-FTGRALTAEEAERTGMVNRVVARDELDAQ 212
Query: 179 EEELGKLVTDDP 190
             EL + +   P
Sbjct: 213 TRELAEQIATMP 224

>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 65/167 (38%), Gaps = 9/167 (5%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NALN  + A L        +   I  V + G G  F AG D+  L        
Sbjct: 31  LNRPKKRNALNDGLMAALKDCLTDIPD--QIRAVVIHGIGDHFSAGLDLSELRERDATEG 88
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L   + + R      Y       P +A L G  +GGG  ++     RVA     +A PE 
Sbjct: 89  LVHSQTWHRVFDKIQYCR----VPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG 144
Query: 124 LIGFHPDAGASFYLSHLPG--HLGEFLALTGAKLNGAEMMACGLATH 168
             G     G S  L  L G   + + + LTG   + AE +  G + +
Sbjct: 145 SRGIFVGGGGSVRLPRLIGVARMADMM-LTGRVYSAAEGVVHGFSQY 190

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 18/181 (9%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NA N  +  +L+  +     D ++  + ++ +G+ F AG D+       ++  
Sbjct: 35  LNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLT 94
Query: 64  LE-----ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
           LE     E + +    YS  +      KP +A + G  + GG  +  P    +A    +F
Sbjct: 95  LEFIYAHESRRYLE--YSLRWR--NVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALF 150
Query: 119 ATPETLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 174
           + P  L+    D G   Y  H     P    E L  TG  +   E+   G+       ++
Sbjct: 151 SDPVVLM----DIGGVEYHGHTWELGPRKAKEIL-FTGRAMTAEEVAQTGMVNRVVPRDR 205
Query: 175 L 175
           L
Sbjct: 206 L 206

>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 4/195 (2%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP  LNAL     A L  L         +  + + G GR FC+GGD+  +        
Sbjct: 32  LARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSXD 91
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DF R     +  +     P +A L+GV  G GA +++   FRVA   T FA   T
Sbjct: 92  TARLLDFNRXTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFT 151
Query: 124 LIGFH-PDAGASFYLSHLP--GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
            +G    D GA++ L  +   GH    L L G  +   E    GL +  +   +      
Sbjct: 152 RVGLSGGDXGAAYLLPRVVGLGHATRLLXL-GDTVRAPEAERIGLISELTEEGRADEAAR 210
Query: 181 ELGKLVTDDPSVIEA 195
            L + + D P++  A
Sbjct: 211 TLARRLADGPALAHA 225

>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NR S  NA +  +  ++     +  ND N+  + +K +G+ F AG D+  +    N  +
Sbjct: 19  MNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTE 78
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            E  +D    L + +Y +    KP +A++ G   GGGAG++      +A     F   E 
Sbjct: 79  EENLEDSL-VLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEV 137
Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 168
            +G  P   + + +  +     + L ++    +     +  L  H
Sbjct: 138 KLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQH 182

>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 7/165 (4%)
Query: 3   ILNRPSALNALNTNMGAKLNK--LFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 60
           +L+ P   N L+  M   L    L  A  ND  +  +S +G    F +G D+  L     
Sbjct: 47  VLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGP--VFSSGHDLKELTE--E 102
Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
           QG+ +   + F+T    +  +  H  P +A++NG+    G  +       VA  K+ FAT
Sbjct: 103 QGR-DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFAT 161
Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 165
           P   +G             +P  +   +  TG  ++  E +  GL
Sbjct: 162 PGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGL 206

>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 11/150 (7%)
Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP A NA+N  +   L       ++  ++    + G+G  FCAG D+ +      +  
Sbjct: 22  INRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVS--GEAV 79
Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L E    F  +           KP +A + G  + GG  + +     VA     F  PE 
Sbjct: 80  LSERGLGFTNV--------PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEV 131
Query: 124 LIGFHPDAGASFYL-SHLPGHLGEFLALTG 152
             G    AG    L + +P  +   LALTG
Sbjct: 132 KRGLVAGAGGLLRLPNRIPYQVAMELALTG 161

>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 715

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 87  PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 146
           P VA +NG+ +GGG  + +   FRV         PE  +G +P  G +  L  L G    
Sbjct: 105 PTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA 164
Query: 147 FLALTGAKLNGAE 159
              +   K N AE
Sbjct: 165 VEWIASGKENRAE 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	312
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	1e-132
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	1e-127
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	2e-31
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	6e-31
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	7e-31
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	2e-30
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	2e-30
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	4e-30
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	5e-30
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	5e-30
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	3e-29
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	3e-29
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	4e-29
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	6e-29
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	8e-29
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	1e-28
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	5e-28
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	1e-27
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	2e-27
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	3e-26
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	4e-26
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	7e-26
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	2e-25
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	2e-25
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	4e-25
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	5e-25
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	7e-25
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	1e-24
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	2e-24
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	2e-24
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	2e-24
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	4e-24
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	5e-24
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	6e-24
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	9e-24
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	1e-23
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	1e-23
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	3e-23
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	4e-23
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	6e-23
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	9e-23
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	1e-22
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	1e-22
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	1e-22
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	1e-22
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	3e-22
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	3e-22
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	3e-22
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	4e-22
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	7e-22
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	1e-21
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	2e-21
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	3e-21
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	4e-21
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	4e-21
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	1e-20
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	2e-20
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	3e-20
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	9e-20
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	2e-19
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	3e-19
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	5e-19
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	9e-19
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	3e-18
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	6e-18
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	7e-18
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	3e-17
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	3e-17
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	4e-17
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	7e-15
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	1e-14
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	2e-12
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363

 Score =  378 bits (972), Expect = e-132
 Identities = 119/304 (39%), Positives = 173/304 (56%), Gaps = 12/304 (3%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 60
             LNRP  LNAL  NM  ++    K WE DP    + +KG+G +AFCAGGDI  +     
Sbjct: 19  ITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEK 78

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
             + +    FFR  Y     +G+  KP+VA+++G+TMGGG G+S+ G FRVA  K +FA 
Sbjct: 79  AKQ-KIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 137

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 180
           PET IG  PD G  ++L  L G LG FLALTG +L G ++   G+ATH+  SEKL ++EE
Sbjct: 138 PETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEE 197

Query: 181 ELGKLVTDDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKCFGLDTVEEIIDSLESE 237
           +L  L +     I + LE Y      D++    +   +D ++ CF  +TVEEII++L+ +
Sbjct: 198 DLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQD 257

Query: 238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISG 297
                  +    L+++ + SP SLK++LR + EG  +T  E L  EYR+S   +      
Sbjct: 258 G----SSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRG---H 310

Query: 298 DFYE 301
           DF+E
Sbjct: 311 DFHE 314

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407

 Score =  368 bits (946), Expect = e-127
 Identities = 89/311 (28%), Positives = 148/311 (47%), Gaps = 17/311 (5%)

Query: 2   AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 60
             LN   ALNAL+ +M   +      W+ DP I  V + GSG +AFCAGGD+ +LYH   
Sbjct: 55  VTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASV 114

Query: 61  QGK---LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 117
             K    E  K FF   Y   YLL T+ KP +   +G+ MGGG G+    + +V    + 
Sbjct: 115 AAKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSR 174

Query: 118 FATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 177
            A PE  IG +PD G S++L+ +PG +G FL LT   +N A+    GLA HY   +   L
Sbjct: 175 IAMPEVTIGLYPDVGGSYFLNRMPGKMGLFLGLTAYHMNAADACYVGLADHYLNRDDKEL 234

Query: 178 IEEELGKLVTDDP-----SVIEACLEKYSDLVYPDKNS--VIHRIDIVDKCFGLDTVEEI 230
           + + +  L   D        ++  + + S+ V   K    +    +++D+     ++ +I
Sbjct: 235 MFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDRLMA-GSLTDI 293

Query: 231 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQG 290
           +  + + ++  ++ W       +   SP+S  ++    + G   +  +C   E  +S+  
Sbjct: 294 VTRMSTLST--DEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNV 351

Query: 291 VSRLISGDFYE 301
            ++   GDF E
Sbjct: 352 CAK---GDFCE 359

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  116 bits (292), Expect = 6e-31
 Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP  LNA    M A++ K  K    DPN+  V + G+GRAFCAG D+  +   M+ G 
Sbjct: 18  LNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGD 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           +      +  +   ++ L    KP VA +NG   G G  +++   FR+   K  FA    
Sbjct: 78  VLR--SRYAPMMKALHHLE---KPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFI 132

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
            +G  PDAG  +YL  L G    L   LA+ G K+   E  A GLAT 
Sbjct: 133 HVGLVPDAGHLYYLPRLVGRAKALE--LAVLGEKVTAEEAAALGLATK 178

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score =  116 bits (292), Expect = 7e-31
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 12/171 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +  P   NAL+     ++       E D ++G V + G+  AFCAG  +           
Sbjct: 18  IKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLRE---IPLDKG 74

Query: 64  LEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
           +   +D FR    + + +   +    +P +A +NGV  GGG G+S+     +      F 
Sbjct: 75  VAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFV 134

Query: 120 TPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLAT 167
                IG   D   S+ L+ + G    +   L LT   L   E    GL +
Sbjct: 135 CAWHTIGIGNDTATSYSLARIVGMRRAME--LMLTNRTLYPEEAKDWGLVS 183

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score =  115 bits (290), Expect = 2e-30
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 13/196 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L  P  LNAL       L +L +  + + ++ F  ++ SGR F +G D   +        
Sbjct: 24  LINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDT 83

Query: 64  LEECKD-------FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
            +   +       F             H K  +  LNG  +G  A +        +    
Sbjct: 84  NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDK 143

Query: 117 V-FATPETLIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATHYSVSE 173
           V    P   +G   + G +  L    G     E   +         M   G  +      
Sbjct: 144 VYLLYPFANLGLITEGGTTVSLPLKFGTNTTYE-CLMFNKPFKYDIMCENGFISK--NFN 200

Query: 174 KLPLIEEELGKLVTDD 189
                 E     V ++
Sbjct: 201 MPSSNAEAFNAKVLEE 216

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score =  114 bits (287), Expect = 2e-30
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP  LNA++T M  +L+   +  E D ++  V + G+GRAFC+GGD+         G 
Sbjct: 21  LDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTG---GDTAGA 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +      R + S         KP +A ++G  +G G  +++     VA   + F    T
Sbjct: 78  ADAANRVVRAITSL-------PKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT 130

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
            +G  PD GAS  L  L G        +A+T  K++ A     G+ +H
Sbjct: 131 RVGLMPDGGASALLPLLIGRARTSR--MAMTAEKISAATAFEWGMISH 176

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score =  113 bits (286), Expect = 4e-30
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 8/168 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNA N  +     +      +DP +  V + GSGR F AG D+        +  
Sbjct: 21  LNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAE---MQARIT 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                +        I  L    KP +  +NG+ +G GA +                 P T
Sbjct: 78  DPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFT 137

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
            +G  P+A +S+ L  L G        L ++   ++  E +  GL   
Sbjct: 138 SLGVAPEAASSYLLPQLVGRQNAAW--LLMSSEWIDAEEALRMGLVWR 183

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score =  113 bits (286), Expect = 5e-30
 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 4/167 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            NRP   NA+NT M  ++ +  KA   D +I  V + G+G  + +G D+ +       G 
Sbjct: 41  FNRPKKKNAINTEMYHEIMRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGGV 99

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            E+ K+    L  F+       KP +A++NG  +G    +        A  +  F TP +
Sbjct: 100 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFS 159

Query: 124 LIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATH 168
            +G  P+  +S+    +       E + + G KL   E  A GL T 
Sbjct: 160 HLGQSPEGCSSYTFPKIMSPAKATE-MLIFGKKLTAGEACAQGLVTE 205

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score =  113 bits (285), Expect = 5e-30
 Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQG 62
           L+ P   N L+  +G  L +  +A  N+ +I  + ++   RA F +G  +  L    +  
Sbjct: 19  LDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ 78

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                ++    L   +  + T  K  VA++NG   GGG  + +    R+A  +  F    
Sbjct: 79  SDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENF 138

Query: 123 TLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
             +G  PD GAS++L  + G+   +   L L G      E +  GL   
Sbjct: 139 HKMGISPDLGASYFLPRIIGYEQTMN--LLLEGKLFTSEEALRLGLIQE 185

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score =  111 bits (280), Expect = 3e-29
 Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 5/167 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP A NAL   +   + K     + + ++  V ++G+   F AG D+     FM   +
Sbjct: 20  INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKD---FMGFVQ 76

Query: 64  LEECKDFFRTLY-SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                   +      +       KP +  + GV +G G  + +      A    +F  P 
Sbjct: 77  NPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPF 136

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH 168
             +G  P+ GAS  L    G+     L  T  K N    +  GL   
Sbjct: 137 VSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNE 183

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score =  110 bits (278), Expect = 3e-29
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 20/171 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +   S+ N  + ++   L   F     +     V + G G  F +G        F+ +  
Sbjct: 18  MKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASK----EFLIRKT 73

Query: 64  LEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             E +  D    +            P +A + G + GGG  + +   F V   ++V+AT 
Sbjct: 74  RGEVEVLDLSGLILDC-------EIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATN 126

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATH 168
               GF P    S  L      LG      +  TG    G E+   G+   
Sbjct: 127 FMKYGFTPVGATSLILREK---LGSELAQEMIYTGENYRGKELAERGIPFP 174

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score =  111 bits (281), Expect = 4e-29
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 6/169 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP  LNAL     A L  L         +  + + G GR FC+GGD+  +        
Sbjct: 32  LARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMD 91

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                DF R     +  +     P +A L+GV  G GA +++   FRVA   T FA   T
Sbjct: 92  TARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFT 151

Query: 124 LIGFHP-DAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
            +G    D GA++ L  + G        L + G  +   E    GL + 
Sbjct: 152 RVGLSGGDMGAAYLLPRVVGLGHATR--LLMLGDTVRAPEAERIGLISE 198

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score =  111 bits (279), Expect = 6e-29
 Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 4/168 (2%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           +  R +  NALNT +  ++     +   D     V    +G  FC G D       +   
Sbjct: 38  LSTRSTEKNALNTEVIKEIVNALNSAAADD-SKLVLFSAAGSVFCCGLDFGYFVKHLRNN 96

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           +     +   T+ +F+       KP V  +NG  +G GA +        A  K  F TP 
Sbjct: 97  RNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPY 156

Query: 123 TLIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATH 168
           T  G  PD  +S     + G     E + + G KL   E  A GL + 
Sbjct: 157 TTFGQSPDGCSSITFPKMMGKASANE-MLIAGRKLTAREACAKGLVSQ 203

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score =  111 bits (279), Expect = 8e-29
 Identities = 44/172 (25%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            NR   LNA   ++ A         E DP I  + + G GR FCAG  + S        K
Sbjct: 45  FNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDK 104

Query: 64  L---EECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
                +  +    +        T L KP +A +NG  +G G   ++    R A     FA
Sbjct: 105 TMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFA 164

Query: 120 TPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
                 G   + G S+ L  L      L   L L+G      E    GL   
Sbjct: 165 AVFARRGLIAEFGISWILPRLTSWAVALD--LLLSGRTFLAEEAAQLGLVKE 214

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score =  109 bits (276), Expect = 1e-28
 Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 6/168 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
             + S  N+LN  +  ++         D     V +   G  FC G D +     +   +
Sbjct: 21  STKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDR 79

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E       + +F+       KP +  +NG  +G GA +        A  K  F TP T
Sbjct: 80  KRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYT 139

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
             G  PD  ++     + G        + L+G KL   E    GL + 
Sbjct: 140 TFGQSPDGCSTVMFPKIMGGASANE--MLLSGRKLTAQEACGKGLVSQ 185

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score =  108 bits (272), Expect = 5e-28
 Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 11/176 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP +LN++N ++   L +L++   +DP      + G+GRAF AGGD     +      
Sbjct: 43  LNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFG---YLKELSA 99

Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             + +         I L       P VA +NG  +G G  +               A P 
Sbjct: 100 DADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPH 159

Query: 123 TLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175
             +G     G                   ALTG +++    +  GLA H  V++  
Sbjct: 160 VQVGLVAADGGPLTWPLHISLLLAKE--YALTGTRISAQRAVELGLANH--VADDP 211

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score =  107 bits (269), Expect = 1e-27
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 8/168 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ P  LN++   M   L  ++   + DP++  V ++G G+AF +GG    +      G 
Sbjct: 29  LDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDE--TIGD 85

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            E      R     +  L    KP V+ + G  +G G  V++     VA          T
Sbjct: 86  YEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHT 145

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
            +G      A+     L G          LT   L+G E    GL + 
Sbjct: 146 KLGVAAGDHAAICWPLLVGMAKAKY--YLLTCETLSGEEAERIGLVST 191

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score =  106 bits (267), Expect = 2e-27
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+ PS  N+    +G +L   ++  ++DP +  + + G+  AFC+G  I +        +
Sbjct: 22  LHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR 81

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             +       +    + L     P +A +NG  +G G  +++    R+   +  +A P+ 
Sbjct: 82  NPD--FSASPVQPAAFELR---TPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQV 136

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
             G  PDA A + L  L G        L LTGA  +    +  GLA  
Sbjct: 137 RFGVAPDALAHWTLPRLVGTAVAAE--LLLTGASFSAQRAVETGLANR 182

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score =  103 bits (260), Expect = 3e-26
 Identities = 34/169 (20%), Positives = 53/169 (31%), Gaps = 7/169 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           I  R   LNA+   +   L ++++  E    +  V ++G G  F AGG    +     + 
Sbjct: 24  ITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEM--RA 81

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E     F      +       +P VA +  V +G G  +++     V    T      
Sbjct: 82  SHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGH 141

Query: 123 TLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
             +G      A      L G          L    L G E    GL   
Sbjct: 142 LRLGVAAGDHAVLLWPLLVGMAKAKY--HLLLNEPLTGEEAERLGLVAL 188

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score =  103 bits (258), Expect = 4e-26
 Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
            +RP A N +N  +  +  ++    E    +  V ++G    FC G D   +Y  M +G 
Sbjct: 22  FHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRG- 79

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             +       LY     L T     ++ + G    GG G        +A     F+  E 
Sbjct: 80  -RKQASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSEL 138

Query: 124 LIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATHYSVSEKLPLIE 179
           L G +P     F    L   +G      + L    ++  E    GL      +E   L+ 
Sbjct: 139 LFGLYPACVLPF----LIRRIGRQKAHYMTLMTKPISVQEASEWGLI-DAFDAESDVLLR 193

Query: 180 EELGKLVTDDPSVIEAC 196
           + L +L   +   I   
Sbjct: 194 KHLLRLRRLNKKGIAHY 210

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score =  103 bits (258), Expect = 7e-26
 Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 9/169 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL--YHFMNQ 61
           LNRP  +NA+  ++     ++     +D ++  V + G+G+ FC+G D  S      +  
Sbjct: 39  LNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGG 98

Query: 62  GKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
                       L   + L    + +P +A +NG  +GGG  +++    RVA     F  
Sbjct: 99  LTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRA 158

Query: 121 PETLIGFHP-DAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGL 165
                G    + G S+ L    G        + LTG  ++  E    GL
Sbjct: 159 AGINNGLTASELGLSYLLPRAIGTSRASD--IMLTGRDVDADEAERIGL 205

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score =  101 bits (253), Expect = 2e-25
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 12/170 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           L+ P+  N  +  +   +         D ++  V + G   R+F AGGD   +       
Sbjct: 15  LDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSE 74

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
            +EE  D    LY  +  +    KP +A ++G  +G G   ++    R+      F  PE
Sbjct: 75  DIEEWIDRVIDLYQAVLNVN---KPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPE 131

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
              G     GA+     L    G             L+    +   L   
Sbjct: 132 LKHGIGCSVGAAI----LGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQ 177

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score =  101 bits (253), Expect = 2e-25
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 7/167 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           ++         +    +L   F     D     V + G+G +FC   D  S     N G 
Sbjct: 31  VHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTS----FNLGT 86

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPE 122
             +  +        +  L +   P +A +NG  +     + +     +A     F   P 
Sbjct: 87  PHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGP-VTNAPEIPVMSDIVLAAESATFQDGPH 145

Query: 123 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 168
              G  P  GA     H+ G   G +  LTG +L+    +  G    
Sbjct: 146 FPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNE 192

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score =  100 bits (251), Expect = 4e-25
 Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 20/169 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP + NAL+  + +   +     +ND ++  V + G+   FCAG D+       +  +
Sbjct: 24  LNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKE---LGDTTE 80

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           L +    +  +           KP +  +NG  + GG  +++     +A     FA    
Sbjct: 81  LPDISPKWPDMT----------KPVIGAINGAAVTGGLELALYCDILIASENAKFADTHA 130

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            +G  P  G S  L      +G  LA    LTG  L+  + +  GL T 
Sbjct: 131 RVGLMPTWGLSVRLPQK---VGVGLARRMSLTGDYLSAQDALRAGLVTE 176

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score =  100 bits (251), Expect = 5e-25
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 10/169 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP+  NA +  M  +L      +E D ++    + G G  F AG D+ S+   +  G 
Sbjct: 24  LNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
               +            L    KP +  ++G  +  G  +++     +A     FA  E 
Sbjct: 84  SLTPEGGINPWQVDGRQLS---KPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEV 140

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             G +P  GA+      P   G   A    LT    +  E    G+   
Sbjct: 141 NRGIYPFGGATI---RFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQE 186

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score =   99 bits (250), Expect = 7e-25
 Identities = 27/167 (16%), Positives = 46/167 (27%), Gaps = 6/167 (3%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           ++   +          +    F     D +   V + GSG A+ A  D        +   
Sbjct: 39  MHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFP---SLGDVTN 95

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPE 122
             E    +      +  L     P ++ +NG  +       +     +A   TVF   P 
Sbjct: 96  PREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSE-YILTTDIILASENTVFQDMPH 154

Query: 123 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 168
              G  P  G         G   G +   T  KL   +     +   
Sbjct: 155 LNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHE 201

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score = 99.6 bits (249), Expect = 1e-24
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 9/181 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG D+   +  ++ G 
Sbjct: 24  LNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGP 83

Query: 64  LEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
               +   R    + + LL  + KP +A++NG   GGG    +     +   +  F   E
Sbjct: 84  EILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSE 143

Query: 123 TLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 181
              G  P    S  ++   GH       +TG    G +    GL     V+E +PL   +
Sbjct: 144 INWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGL-----VNESVPL--AQ 196

Query: 182 L 182
           L
Sbjct: 197 L 197

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score = 98.1 bits (245), Expect = 2e-24
 Identities = 39/167 (23%), Positives = 59/167 (35%), Gaps = 9/167 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           ++    +N L   M   LN+   A + D N+G + + G+ R F  G D+      +  G+
Sbjct: 20  MDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDL----KVLTSGE 73

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +   D  R  +   Y L ++ KP V    G  +  GA +   G  RVA         E 
Sbjct: 74  AKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEV 133

Query: 124 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 168
            IG      A   L     P    +  A       G   +A G    
Sbjct: 134 AIGMTIPYAAMEVLKLRLTPSAYQQ-AAGLAKTFFGETALAAGFIDE 179

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score = 98.4 bits (246), Expect = 2e-24
 Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 9/169 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN P   N L+  M   L +     E DP +  V + G G+AF AG D+  L   + +  
Sbjct: 14  LNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER-VTELG 72

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            EE      +L    + + T+ KP VA +NG  + GGAG+++     V   +      E 
Sbjct: 73  AEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEV 132

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            IGF   A  S  L      +GE  A    LTG  +   E  A GL   
Sbjct: 133 KIGFVA-ALVSVILVRA---VGEKAAKDLLLTGRLVEAREAKALGLVNR 177

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score = 98.4 bits (246), Expect = 2e-24
 Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 15/168 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP   NALN+ +  +L +  +    D +   + + G G AFCAG D+           
Sbjct: 36  LQRPERRNALNSQLVEELTQAIRK-AGDGSARAIVLTGQGTAFCAGADLSG----DAFA- 89

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             +  D    L+  +        P V  +NG  +G G  +++    RV      F  P +
Sbjct: 90  -ADYPDRLIELHKAMDASP---MPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTS 145

Query: 124 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 168
             G   D  +   LS L GH       + L+  KL     +  G+A  
Sbjct: 146 KYGLALDNWSIRRLSSLVGHGRARA--MLLSAEKLTAEIALHTGMANR 191

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score = 97.6 bits (244), Expect = 4e-24
 Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+R    NA ++ M A L      +E         +   G  F AG D++     +    
Sbjct: 27  LDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLME----LAPKL 82

Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                 +         ++     KP V  + G     G  + +     VA   T FA  E
Sbjct: 83  AASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLE 142

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            L G  P  G++      P   G   A    LTG + +  E +   L T 
Sbjct: 143 VLRGIPPLGGSTV---RFPRAAGWTDAMRYILTGDEFDADEALRMRLLTE 189

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score = 97.4 bits (243), Expect = 5e-24
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 7/166 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI--VSLYHFMNQ 61
           L R  A + L+  M A L+   +    D ++  + + G GR FCAG D+  +  +     
Sbjct: 22  LGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPD 80

Query: 62  GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
                  D F    + +  L    KP +A++ G+    G  +        A     F  P
Sbjct: 81  EGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLP 140

Query: 122 ETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 165
               G      A   +S +     + E +ALTGA  +    +A GL
Sbjct: 141 GVQNGGFCTTPAV-AVSRVIGRRAVTE-MALTGATYDADWALAAGL 184

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score = 97.2 bits (243), Expect = 6e-24
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 5/167 (2%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NR S  NA +  +  ++     +  ND N+  + +K +G+ F AG D+  +    N  +
Sbjct: 19  MNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTE 78

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            EE  +    L + +Y +    KP +A++ G   GGGAG++      +A     F   E 
Sbjct: 79  -EENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEV 137

Query: 124 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 168
            +G  P A  S Y+            L ++    +     +  L  H
Sbjct: 138 KLGLIP-AVISPYVVRAIGERAAKM-LFMSAEVFDATRAYSLNLVQH 182

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score = 96.9 bits (242), Expect = 9e-24
 Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 16/203 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI--------VSL 55
           LN P   NAL+T + ++L++  +   +DP +  V +  +G  FCAG D+         S 
Sbjct: 26  LNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSS 85

Query: 56  YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 115
            + M   +  E     R +            P +A ++G    GG G+       VA  +
Sbjct: 86  AYDMAVERAREMAALMRAIVES-------RLPVIAAIDGHVRAGGFGLVGACDIAVAGPR 138

Query: 116 TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175
           + FA  E  IG  P   +   L  L         LTG K +       GL    +  +  
Sbjct: 139 SSFALTEARIGVAPAIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLI-TMAAEDLD 197

Query: 176 PLIEEELGKLVTDDPSVIEACLE 198
             I++ +  +    P  + A   
Sbjct: 198 AAIDQLVTDVGRGSPQGLAASKA 220

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score = 96.4 bits (241), Expect = 1e-23
 Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 15/170 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L RP  LNAL+  M A++    +A++ +  +  + + G GRAF AG DI      M +  
Sbjct: 20  LARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQE----MAKDD 75

Query: 64  LEECKDF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
               +       +  + ++     P +A +NG+ +GGG  +++     VA     F  PE
Sbjct: 76  PIRLEWLNQFADWDRLSIVK---TPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPE 132

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             +G  P AG +  L+ L   +G   A     TGA+++  E    G+   
Sbjct: 133 VNLGVMPGAGGTQRLTKL---IGPKRALEWLWTGARMSAKEAEQLGIVNR 179

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score = 96.5 bits (241), Expect = 1e-23
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 16/187 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78

Query: 64  LEECKDFFRTLYSFIYLLGTHL-------KPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
            ++       L   I              KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138

Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLG---EFLALTGAKLNGAEMMACGLATHYSVSE 173
            F   E  +G   D G    L  + G+     E L  T  K+   E +  GL     VS 
Sbjct: 139 FFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNE-LTFTARKMMADEALDSGL-----VSR 192

Query: 174 KLPLIEE 180
             P  + 
Sbjct: 193 VFPDKDV 199

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score = 95.8 bits (239), Expect = 3e-23
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 7/165 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
            LNRP A NAL+  M A L + F     D ++  V +  SG+AFCAG D+  +     + 
Sbjct: 40  TLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEM---RAEP 96

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E  +  F      +  +     P +A ++G+    G  +       VA     FA   
Sbjct: 97  SREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSG 156

Query: 123 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 165
             +G          LS         E + +TG  ++  +    GL
Sbjct: 157 INVGLFCSTPGV-ALSRNVGRKAAFE-MLVTGEFVSADDAKGLGL 199

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score = 94.9 bits (237), Expect = 4e-23
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 12/170 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           LNR    N+L+  +  +L  +      + N   V + G+G +AFCAG D+          
Sbjct: 24  LNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKE----RAGM 79

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E+ +     + + + ++    +P +A +NG+ +GGG  +S+   FR+A         E
Sbjct: 80  NEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTE 139

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           T +   P AG +  L  L   +G   A     TG +++  E    GL   
Sbjct: 140 TTLAIIPGAGGTQRLPRL---IGVGRAKELIYTGRRISAQEAKEYGLVEF 186

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score = 94.9 bits (237), Expect = 6e-23
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG DI       +   
Sbjct: 40  LNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKE---MADLTF 96

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +     F   +  +  +     P +A + G  +GGG  +++     +A     F  PE 
Sbjct: 97  ADAFTADFFATWGKLAAVR---TPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEI 153

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            +G  P  G S  L+     +G+  A    LTG  ++ AE    GL + 
Sbjct: 154 KLGVLPGMGGSQRLTRA---IGKAKAMDLILTGRTMDAAEAERSGLVSR 199

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score = 93.8 bits (234), Expect = 9e-23
 Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 12/198 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP   NAL+  +   L     A   +  +  +   G+GR F AG D            
Sbjct: 22  LSRPEKRNALSAELVEALIDGVDAAHRE-QVPLLVFAGAGRNFSAGFDF----TDYETQS 76

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             +       +   +  +       +A+ +G   G G  +     +R    +  F  P  
Sbjct: 77  EGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGL 136

Query: 124 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 180
             G       +     +         +  +    +  E    G      + ++   LI+ 
Sbjct: 137 KFGLVL---GTRRFRDIVGADQALS-ILGSARAFDADEARRIGFVRDCAAQAQWPALIDA 192

Query: 181 ELGKLVTDDPSVIEACLE 198
                   DP+       
Sbjct: 193 AAEAATALDPATRATLHR 210

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 18/170 (10%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP A N++N  +   L       + D  +    + G+G +FCAG D+ +      +G 
Sbjct: 30  INRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKA----FARG- 84

Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                +        +        KP +A + G  + GG  +++     VA   + F  PE
Sbjct: 85  -----ENVVVEGRGLGFTERPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPE 139

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
              G     G       LP  +   +A    LTG  L+     A G+   
Sbjct: 140 VKRGLVAGGGGLL---RLPERIPYAIAMELALTGDNLSAERAHALGMVNV 186

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score = 94.2 bits (235), Expect = 1e-22
 Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRPS  NAL+  M   + + +   +NDP+I    + G+G  FCAG D+ +      +  
Sbjct: 35  MNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKA----ATKKP 90

Query: 64  LEEC--KDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 120
             +      +        L G  L KP +A + G  + GG  +      RVA     F  
Sbjct: 91  PGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGI 150

Query: 121 PETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            E     +P  G++     L   +   +A    LTG  +  AE    GL  H
Sbjct: 151 SEAKWSLYPMGGSAV---RLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGH 199

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score = 93.8 bits (234), Expect = 1e-22
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NR    N+L+ N+   L+K   A ++D  +  + ++      FCAG D+        + 
Sbjct: 27  INRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADL----KERAKM 82

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
              E   F   + + I  +     P +A ++G+ +GGG  +++    RVA         E
Sbjct: 83  SSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE 142

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           T +   P  G +  L      +G  LA     +   L+G E  A GL +H
Sbjct: 143 TKLAIIPGGGGTQRLPRA---IGMSLAKELIFSARVLDGKEAKAVGLISH 189

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score = 94.8 bits (236), Expect = 1e-22
 Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 32/193 (16%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG- 62
            NRP   NA+  +   +L+ L +  + DP++  + + G G  FCAG D+ +     +   
Sbjct: 50  FNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAG 109

Query: 63  -------------------------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 97
                                                      L    KP V  ++G  +
Sbjct: 110 GGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCV 169

Query: 98  GGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKL 155
            GG  +++     +A        P   +   P AG     +H          L  TG  +
Sbjct: 170 AGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGDQRAKR-LLFTGDCI 225

Query: 156 NGAEMMACGLATH 168
            GA+    GLA  
Sbjct: 226 TGAQAAEWGLAVE 238

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score = 92.6 bits (231), Expect = 3e-22
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 13/169 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI       N+  
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKE---MQNRTF 78

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
            +     F + +  I  +    KP +A +NG  +GGG  +++      A  K  F  PE 
Sbjct: 79  QDCYSGKFLSHWDHITRIK---KPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 135

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           L+G  P AG +  L+     +G+ LA    LTG +++  +    GL + 
Sbjct: 136 LLGTIPGAGGTQRLTRA---VGKSLAMEMVLTGDRISAQDAKQAGLVSK 181

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score = 94.1 bits (234), Expect = 3e-22
 Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 16/178 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-------AFCAGGDI---V 53
            NRP   NA   +   +L ++       P++G V + G+G        AFC+GGD     
Sbjct: 72  FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRG 131

Query: 54  SLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTF 109
              +    G   +  D  R     I  +   +    K  + ++NG   GGG  + +    
Sbjct: 132 RSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDL 191

Query: 110 RVACGKT-VFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGL 165
            +A  +   F   +  +G       S YL+   G      +   G      +M   G 
Sbjct: 192 TLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGA 249

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score = 92.6 bits (231), Expect = 3e-22
 Identities = 48/170 (28%), Positives = 67/170 (39%), Gaps = 12/170 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP   NAL+TNM ++    +   ++D  I    + G+G A+C GGD+          +
Sbjct: 24  MNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSD----GWMVR 79

Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                           LL   L KP +A +NG  +GGG  +      RV+     F  PE
Sbjct: 80  DGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPE 139

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
              G  P AG+   L      +    A    LTG  L   E    GL  H
Sbjct: 140 VQRGLVPGAGSMVRLKRQ---IPYTKAMEMILTGEPLTAFEAYHFGLVGH 186

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score = 92.3 bits (230), Expect = 4e-22
 Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 17/171 (9%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NA++    A L   F  ++ DP      + G    FCAG D+      M   +
Sbjct: 26  LNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADL----KAMGTDR 81

Query: 64  LEEC--KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
             E           S + L     KP +A ++G  + GG  +++    RV     V    
Sbjct: 82  GNELHPHGPGPMGPSRLRL----SKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVF 137

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
               G     G +     LP  +G   A    LTG  ++  E +  GL   
Sbjct: 138 CRRWGVPLIDGGTI---RLPRLIGHSRAMDLILTGRPVHANEALDIGLVNR 185

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score = 91.8 bits (229), Expect = 7e-22
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 15/170 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L+RP ALNALN  + A++    + ++ D  IG + + GS RAF AG DI      M    
Sbjct: 25  LDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAE----MVTLT 80

Query: 64  LEECKDF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             + ++    + +  +  +    KP VA + G  +GGG  +++     +A     F  PE
Sbjct: 81  PHQARERNLLSGWDSLTQVR---KPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPE 137

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             +G  P  G +  L+     +G+  A    LTG  L   E    GL + 
Sbjct: 138 ITLGILPGLGGTQRLTRA---VGKAKAMDLCLTGRSLTAEEAERVGLVSR 184

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP A NA N  +  +L+  +     D ++  + ++ +G+ F AG D+           
Sbjct: 35  LNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRG----GGPVP 90

Query: 64  LEECKDFFRTLYSFIYLLGTHL-----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 118
            +   +F     S  YL  +       KP +A + G  + GG  +  P    +A    +F
Sbjct: 91  DKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALF 150

Query: 119 ATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           + P  L+            +     LG   A     TG  +   E+   G+   
Sbjct: 151 SDPVVLMDI--GGVEYHGHTWE---LGPRKAKEILFTGRAMTAEEVAQTGMVNR 199

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score = 90.3 bits (225), Expect = 2e-21
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 19/170 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NRP A NA+N  +   L       ++  ++    + G+G  FCAG D+ +       G+
Sbjct: 22  INRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKA----FVSGE 77

Query: 64  LEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                         +        KP +A + G  + GG  + +     VA     F  PE
Sbjct: 78  AVLS-------ERGLGFTNVPPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPE 130

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
              G    AG       LP  +   +A    LTG      +    G    
Sbjct: 131 VKRGLVAGAGGLL---RLPNRIPYQVAMELALTGESFTAEDAAKYGFINR 177

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score = 90.3 bits (225), Expect = 3e-21
 Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 21/178 (11%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL+ +M  +L   +   END  +  + + G+GRAFC+G D+      + +  
Sbjct: 26  LNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKE----IPEDG 81

Query: 64  LEECKDFFRTLYSFIYLLGTHL-------KPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
               +  + + Y                 KP +  +NG+  G G          +A  + 
Sbjct: 82  KVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQA 141

Query: 117 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAK--LNGAEMMACGLATH 168
            F  P   IG             +   L   +A    L G    ++       GL + 
Sbjct: 142 TFFDPHVSIGLVAGRELVR----VSRVLPRSIALRMALMGKHERMSAQRAYELGLISE 195

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score = 89.5 bits (223), Expect = 4e-21
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN   A NA+++ +   + +L    E D NI  V + G GR F AG DI          +
Sbjct: 21  LNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQ 79

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E     +  +  +       KP +A ++G  +GGG   ++    R A        PE 
Sbjct: 80  ATELAQLGQVTFERVEKCS---KPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPEL 136

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
            +G  P    +  L      +G+  A    LT   + GAE +  GL   
Sbjct: 137 TLGLIPGFAGTQRLPRY---VGKAKACEMMLTSTPITGAEALKWGLVNG 182

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score = 89.5 bits (223), Expect = 4e-21
 Identities = 45/169 (26%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NALN  + A L       +    I  V + G G  F AG D+      + +  
Sbjct: 31  LNRPKKRNALNDGLMAALKDCLT--DIPDQIRAVVIHGIGDHFSAGLDLSE----LRERD 84

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E     +T +     +     P +A L G  +GGG  ++     RVA     +A PE 
Sbjct: 85  ATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG 144

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             G     G S  L  L   +G        LTG   + AE +  G + +
Sbjct: 145 SRGIFVGGGGSVRLPRL---IGVARMADMMLTGRVYSAAEGVVHGFSQY 190

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score = 88.4 bits (220), Expect = 1e-20
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NRP A NA+N  +   +    +  ++DP +  V + G+G ++FCAG D+ +    + + 
Sbjct: 24  INRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKA----IARR 79

Query: 63  KLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 121
           +     D     + F   +   + KP +A +NG  +GGG  +++     VA  +  F  P
Sbjct: 80  ENLYHPDHPE--WGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLP 137

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           E   G    AG  F    +   L   +A    LTG  L+ A     GL   
Sbjct: 138 EVKRGLIAAAGGVFR---IAEQLPRKVAMRLLLTGEPLSAAAARDWGLINE 185

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score = 87.6 bits (218), Expect = 2e-20
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           +NRP   NA      A++   F    +D N+  + + G G  AFC+GGD     H    G
Sbjct: 28  INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG 87

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
           + +  +     L   I ++    KP +A++ G  +GGG  +++     +A    +F    
Sbjct: 88  EDQIPRLNVLDLQRLIRIIP---KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTG 144

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             +G       S YL+ +   +G   A        + N  E +  GL   
Sbjct: 145 PKVGSFDAGYGSGYLARI---VGHKKAREIWYLCRQYNAQEALDMGLVNT 191

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score = 87.3 bits (217), Expect = 3e-20
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 7/175 (4%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           +L+ P   N L+  M   L        +  ++  + +   G  F +G D+  L     + 
Sbjct: 47  VLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKEL---TEEQ 103

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             +   + F+T    +  +  H  P +A++NG+    G  +       VA  K+ FATP 
Sbjct: 104 GRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPG 163

Query: 123 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 175
             +G          L+         E +  TG  ++  E +  GL +      +L
Sbjct: 164 VNVGLFCSTPGVA-LARAVPRKVALE-MLFTGEPISAQEALLHGLLSKVVPEAEL 216

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score = 86.1 bits (214), Expect = 9e-20
 Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 12/169 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           ++RP   NA+   +  ++           +IG V + G    F AG D+      +    
Sbjct: 39  VSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPE----LRTLN 93

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E     R     I  +    KP VA + G  +G G  +++   +RV+     F   E 
Sbjct: 94  APEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEI 153

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           L G  P  G    L+ +   +G   A     +G   +  E +A GL   
Sbjct: 154 LAGLIPGGGGMGRLTRV---VGSSRAKELVFSGRFFDAEEALALGLIDD 199

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 17/175 (9%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL----YHF 58
           L+ P  +N +   M  +L  +     +D ++  +    +    F A  D+          
Sbjct: 24  LDNP-PVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQ 82

Query: 59  MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTV 117
                     + F+ +   I       +  +  L G   GGGA          A      
Sbjct: 83  ELAASAPADVNVFQAVGELIRHQP---QVTIVKLAGKARGGGAEFVAAADMAFAAAETAG 139

Query: 118 FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
               E L+G  P  G + YL      +G   A    LT    +     + G    
Sbjct: 140 LGQIEALMGIIPGGGGTQYLRGR---VGRNRALEVVLTADLFDAETAASYGWINR 191

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score = 84.1 bits (209), Expect = 3e-19
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 19/173 (10%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMNQ 61
            N    LNAL+      L +          I  + ++     + F AG DI    H +  
Sbjct: 19  FNYGRKLNALSKVFIDDLMQALSDLNRP-EIRCIILRAPSGSKVFSAGHDI----HELPS 73

Query: 62  GKLEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 119
           G  +     D  R +   I       KP ++++ G   GG   + +     +A   + F+
Sbjct: 74  GGRDPLSYDDPLRQITRMIQKFP---KPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFS 130

Query: 120 TPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
                +G   +      L+      G  +      T + +     +A G+  H
Sbjct: 131 MTPVNLGVPYNLVGIHNLTRD---AGFHIVKELIFTASPITAQRALAVGILNH 180

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score = 86.1 bits (213), Expect = 5e-19
 Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 29/190 (15%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS---------GRAFCAGGDI-- 52
           + R   LNA +      +         DP +    ++G           R F AG ++  
Sbjct: 182 MCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKY 241

Query: 53  -----VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-----KPHVAILNGVTMGGGAG 102
                +SL  F+ + +L       R + +     G        KP VA ++G  +GGGA 
Sbjct: 242 LSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQ 301

Query: 103 VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGA 158
           + +     +A     F+ P    G  P A        L    G  ++    L G ++   
Sbjct: 302 LLLVFDRVLASSDAYFSLPAAKEGIIPGAANLR----LGRFAGPRVSRQVILEGRRIWAK 357

Query: 159 EMMACGLATH 168
           E  A  L   
Sbjct: 358 EPEARLLVDE 367

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score = 82.3 bits (204), Expect = 9e-19
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LN    +NA++ ++    N      E D  I  V + G       G D+      M    
Sbjct: 21  LNNG-KVNAISPDVIIAFNAALDQAEKDRAI--VIVTGQPGILSGGYDL----KVM-TSS 72

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPE 122
            E   +      +    + +H  P +    G  +  GA + +   +R+   G       E
Sbjct: 73  AEAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNE 132

Query: 123 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 165
             IG                         +     +    MA G 
Sbjct: 133 VQIGMTMHHAGIELARDRLRKSAFNR-SVINAEMFDPEGAMAAGF 176

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score = 82.1 bits (203), Expect = 3e-18
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 19/181 (10%)

Query: 4   LNRPSALN----ALNTNMGAKLNKLFKA-----WENDPNIGFVSMKGSGRAFCAGGDIVS 54
           ++   A+N      +T +   +                    V +      F  GGD+  
Sbjct: 47  MHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLAL 106

Query: 55  LYHFMNQGKLEECKDFFRTLYSFIYLLGTHL---KPHVAILNGVTMGGGAGVSIPGTFRV 111
               + +G      D+ +     ++     L      +A++ G  +GGG   ++     +
Sbjct: 107 FCQLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTII 166

Query: 112 ACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLAT 167
           A    +   PE L    P  GA    S +   +   LA    L G   +  +++  GL  
Sbjct: 167 AEEGVMMGLPEVLFDLFPGMGAY---SFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVD 223

Query: 168 H 168
            
Sbjct: 224 R 224

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score = 81.1 bits (201), Expect = 6e-18
 Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 16/172 (9%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG------RAFCAGGDIVSLYH 57
           +NRP   NA       +L   F     D  IG V + G+G       AFC+GGD      
Sbjct: 25  INRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSV--- 81

Query: 58  FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 117
               G +++       +     L+ +  K  +A++ G  +GGG  + +     +A    +
Sbjct: 82  RGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAI 141

Query: 118 FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 165
           F      +G       S YL+ +   +G+  A        + +  E    G+
Sbjct: 142 FGQTGPKVGSFDGGFGSSYLARI---VGQKKAREIWYLCRQYSAQEAERMGM 190

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score = 81.1 bits (201), Expect = 7e-18
 Identities = 36/174 (20%), Positives = 53/174 (30%), Gaps = 17/174 (9%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
            N P  +N +   +   L  L +   +      V    +    F    D+      + + 
Sbjct: 23  FNAP-PMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMT----KVPEY 77

Query: 63  KLEECKDFFRTLYSFIYL---LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA-CGKTVF 118
             E  K       S   L   L       +A L G   G G+   +    R A     + 
Sbjct: 78  TAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAIL 137

Query: 119 ATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             PE  IG  P AGA  +L+ L   LG   A    LT +  +       G    
Sbjct: 138 GQPEVGIGAPPGAGAIQHLTRL---LGRGRALEAVLTSSDFDADLAERYGWVNR 188

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score = 79.1 bits (196), Expect = 3e-17
 Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 9/169 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
              P  +N+L+     +L    +  END +   V +       F AG D+      M   
Sbjct: 20  FKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLT----EMCGR 74

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-- 120
                  +++ +      L       V+ +NG    GG  V++   +R+      +    
Sbjct: 75  SPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL 134

Query: 121 PETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATH 168
            ET +G          L +  GH   E     G     AE +  G+   
Sbjct: 135 NETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQ 183

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score = 79.1 bits (196), Expect = 3e-17
 Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 62
           L+   + N+ +     + N        DP+I  V +     + F AG DI    +F+   
Sbjct: 24  LHINKS-NSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADI----NFLRSA 78

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV-FATP 121
                  F       +  +    + ++A L G T+GGG  +++    R    +      P
Sbjct: 79  DPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLP 138

Query: 122 ETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
           E  +G     G +  L+ L   +G   A    +TG  +   E +  GL   
Sbjct: 139 EVSLGVLAGTGGTQRLARL---IGYSRALDMNITGETITPQEALEIGLVNR 186

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score = 78.8 bits (195), Expect = 4e-17
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 26/178 (14%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDI--------VS 54
           +NRP   NA       ++ +       D NIG + + G+G +AFC+GGD           
Sbjct: 43  INRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102

Query: 55  LYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG 114
               ++   + + +   RT            KP VA++ G ++GGG  + +     +A  
Sbjct: 103 DDSGVHHLNVLDFQRQIRTCP----------KPVVAMVAGYSIGGGHVLHMMCDLTIAAD 152

Query: 115 KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 168
             +F      +G       + Y++ +   +G+  A        + +  + +  GL   
Sbjct: 153 NAIFGQTGPKVGSFDGGWGASYMARI---VGQKKAREIWFLCRQYDAKQALDMGLVNT 207

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score = 73.9 bits (181), Expect = 7e-15
 Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 11/215 (5%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWEND-PNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 60
                  LN+ +  +  +L+   +    + P +  V +     R FC+G +I  L    +
Sbjct: 45  RDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTH 104

Query: 61  QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVF 118
             K+  CK    T               +A +NG   GGG  +++            +  
Sbjct: 105 AWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSV 164

Query: 119 ATPE-TLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATH-YSVS 172
           + PE  L+G  P  G    ++            F       + G    A  L       +
Sbjct: 165 SLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFC-TVVEGVRGERAKAWRLVDEVVKPN 223

Query: 173 EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD 207
           +    I+    +L         A     + +   D
Sbjct: 224 QFDQAIQARALELAAQSDRPAHAQGVPLTRIERTD 258

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L  P   N+L+ ++   L   ++   +  ++  + + G+   F  G DI      M +G 
Sbjct: 23  LINPPV-NSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGE-MQKGN 80

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
           ++E K  + ++     LL    KP VA ++G+ +GGG  +++    R++        PE 
Sbjct: 81  VKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPEL 140

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLAL----TGAKLNGAEMMACGL 165
            +G  P  G +  L  L   +G   AL    T   +   E  + GL
Sbjct: 141 QLGVIPGFGGTQRLPRL---VGLTKALEMILTSKPVKAEEGHSLGL 183

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 18/166 (10%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L  P   NA++  +  ++    +   +D  +  + + G+   FCAG DI     F     
Sbjct: 36  LCNPPV-NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-- 92

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                            +  + KP +A + GV +GGG  +++   +R+A  K     PE 
Sbjct: 93  -LALGSLVDE-------IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEV 144

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLAL----TGAKLNGAEMMACGL 165
            +G  P A  +  L  +   +G  +AL    +G  L+  E +  G+
Sbjct: 145 TLGILPGARGTQLLPRV---VGVPVALDLITSGKYLSADEALRLGI 187

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 11  NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 70
           N  N     +L +   A + D ++  V +      F  G DI            E     
Sbjct: 30  NKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAEL-IAG 88

Query: 71  FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD 130
                           P VA +NG+ +GGG  + +   FRV         PE  +G +P 
Sbjct: 89  NLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPG 148

Query: 131 AGASFYLSHLPGHLGEFLAL----TGAKLNGAEMMACGL 165
            G +  L  L   +G   A+    +G +    + +    
Sbjct: 149 FGGTVRLPRL---IGVDNAVEWIASGKENRAEDALKVSA 184

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.0 bits (134), Expect = 7e-09
 Identities = 60/349 (17%), Positives = 96/349 (27%), Gaps = 110/349 (31%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-----AFCAGGDIVSLYHF 58
           ++R      L       L +L        N+    + GSG+       C    +     F
Sbjct: 131 VSRLQPYLKLRQ----ALLEL----RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 59  ----MNQGKLEECKDFFRTLYSFIYLLGTHL---------------------------KP 87
               +N       +     L   +Y +  +                            KP
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 88  HVA---ILNGVTMGGGAGVSIPGTFRVACGKTVFAT-------------------PETLI 125
           +     +L  V             F ++C K +  T                       +
Sbjct: 243 YENCLLVLLNV-----QNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 126 GFHPDAGASF---YLSHLPGHLGEFLALTGAKLNG---AEMMACGLAT-----HYSVSEK 174
              PD   S    YL   P  L     LT         AE +  GLAT     H +  + 
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355

Query: 175 LPLIEEELGKLVTDDPSVIEACLEKYSDL-VYPDKNSVIHRIDIVDKCFGL-------DT 226
             +IE  L  L   +P+        +  L V+P   S      I      L         
Sbjct: 356 TTIIESSLNVL---EPAEYRKM---FDRLSVFPP--SA----HIPTILLSLIWFDVIKSD 403

Query: 227 VEEIIDSLESEASLINDPWCGSTLRL----LKEASPLSLKVSL-RSIRE 270
           V  +++ L    SL+      ST+ +    L+    L  + +L RSI +
Sbjct: 404 VMVVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 5e-08
 Identities = 48/379 (12%), Positives = 107/379 (28%), Gaps = 116/379 (30%)

Query: 3   ILNRPSALNAL----------NTN-----MGAKLNK----LFKAWE---NDPNIGFVSMK 40
           I+    A++                    +   L      L    +     P++      
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 41  GSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI-LNGVTMGG 99
                      + + Y+        + +   + L          L+P   + ++G  + G
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLR---QALLE--------LRPAKNVLIDG--VLG 160

Query: 100 GAGVSIPGTFRVACGKTVFATPETL----IGFHPDAGASFYLS----HLPGHLGEFLALT 151
                         GKT  A  +      +    D    F+L+    + P  + E L   
Sbjct: 161 -------------SGKTWVAL-DVCLSYKVQCKMDFKI-FWLNLKNCNSPETVLEMLQKL 205

Query: 152 GAKLNGAEMMACGLATHYSVSEKLPL--IEEELGK-----------LVTDD---PSVIEA 195
             +++         + H S + KL +  I+ EL +           LV  +        A
Sbjct: 206 LYQIDP---NWTSRSDH-SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 196 ----CLEKYSDLVYPDKNSVIHR-IDIVDKCFGLDT----VEEIIDSL---ESEASLIND 243
               C           K  +  R   + D      T    ++    +L   E ++ L+  
Sbjct: 262 FNLSC-----------KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK- 309

Query: 244 PWCGSTLRLL-KEA---SPLSLKVSLRSIREG--RFQTFDECLVREYRMSLQ-GVSRLIS 296
            +     + L +E    +P  L +   SIR+G   +  +      +    ++  ++ L  
Sbjct: 310 -YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 297 GDF---YEVSNFQILNKHV 312
            ++   ++     +     
Sbjct: 369 AEYRKMFD--RLSVFPPSA 385

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	100.0
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	100.0
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	100.0
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	100.0
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	100.0
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	100.0
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	100.0
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	100.0
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	100.0
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	100.0
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	100.0
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	100.0
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	100.0
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	100.0
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	100.0
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	100.0
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	100.0
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	100.0
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	100.0
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	100.0
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	100.0
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	100.0
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	100.0
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	100.0
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	100.0
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	100.0
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	100.0
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	100.0
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	100.0
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	100.0
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	100.0
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	100.0
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	100.0
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	100.0
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	100.0
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	100.0
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	100.0
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	100.0
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	100.0
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	100.0
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	100.0
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	100.0
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	100.0
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	100.0
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	100.0
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	100.0
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	100.0
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	100.0
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	100.0
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	100.0
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	100.0
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	100.0
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	100.0
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	100.0
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	100.0
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	100.0
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	100.0
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	100.0
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	100.0
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	100.0
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	100.0
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	100.0
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	100.0
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	100.0
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	100.0
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	100.0
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	100.0
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	100.0
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	100.0
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	100.0
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	100.0
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	99.86
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	99.83
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	99.81
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	99.67
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	99.64
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	99.55
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	99.54
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	99.14
3qwd_A	203	ATP-dependent CLP protease proteolytic subunit; ca	98.83
1yg6_A	193	ATP-dependent CLP protease proteolytic subunit; en	98.82
2f6i_A	215	ATP-dependent CLP protease, putative; structural g	98.78
1tg6_A	277	Putative ATP-dependent CLP protease proteolytic S;	98.73
3p2l_A	201	ATP-dependent CLP protease proteolytic subunit; st	98.63
4gm2_A	205	ATP-dependent CLP protease proteolytic subunit; st	98.27
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	98.19
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	97.94
2f9i_B	285	Acetyl-coenzyme A carboxylase carboxyl transferase	97.93
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	97.9
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	97.81
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	97.69
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	97.65
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	97.54
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	97.52
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	97.23
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	97.22
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	96.96
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	96.34
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	96.16
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	96.03
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	95.63
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	95.61
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	94.92
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	94.38
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	93.95
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	93.13
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	93.02
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	91.35
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	86.89
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	84.31
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	83.33

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.7e-63  Score=454.41  Aligned_cols=295  Identities=34%  Similarity=0.604  Sum_probs=258.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ..+......++...+.++.
T Consensus        21 ~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~   99 (353)
T 4hdt_A           21 LLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSA-KADGAEARRFWFDEYRLNA   99 (353)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHH-HTTSHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhcc-chhhHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 7999999999987543 2334556677778889999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE  159 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e  159 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+|+|||++|+|+|
T Consensus       100 ~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~e  179 (353)
T 4hdt_A          100 HIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPGKLGLHAALTGAPFSGAD  179 (353)
T ss_dssp             HHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSSTTHHHHHHHHCCCBCHHH
T ss_pred             HHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhhHHHHHHHhcCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999966999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++++.+.++...      .+......+..  ......+......|+++|+.++++++++.|+..  
T Consensus       180 A~~~GLv~~vv~~~~l~~~a~~la~~------~~~~~l~~~~~--~~~~~~l~~~~~~i~~~f~~~~~~~i~~~L~~~--  249 (353)
T 4hdt_A          180 AIVMGFADHYVPHDKIDEFTRAVIAD------GVDAALAAHAQ--EPPASPLAEQRSWIDECYTGDTVADIIAALRAH--  249 (353)
T ss_dssp             HHHHTSCSEECCGGGHHHHHHHHHHH------CHHHHHHHHCB--CCCCCHHHHTHHHHHHHTTCSSHHHHHHHHHHH--
T ss_pred             HHHcCCCcEEeCHHHHHHHHHHHHHh------chhHHHHHhcc--cCCccchHHHHHHHHHHhCCCCHHHHHHHHHhc--
Confidence            99999999999999998777766321      12222222222  223344566678899999999999999999875  


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHHHHHHHHHHHHhhhcCCCCChhhhhheee--ccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDECLVREYRMSLQGVSRLISGDFYEVSNFQI--LNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l--~~r~  311 (312)
                        ..+|+.++++.|+++||.|++.+|+.++++... +++++++.|.+++..++.   ++||+|||+|||  +||+
T Consensus       250 --~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~---s~D~~EGvrAfl~dekR~  319 (353)
T 4hdt_A          250 --DAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLK---SHDLVEGIRAQLVDKDRN  319 (353)
T ss_dssp             --CSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHC----C
T ss_pred             --ccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhC---CchHHHHHhhhhhCcCCC
Confidence              668999999999999999999999999998774 899999999999999998   999999999999  5654

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=100.00  E-value=2.6e-61  Score=449.65  Aligned_cols=304  Identities=29%  Similarity=0.536  Sum_probs=261.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccC---ChHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG---KLEECKDFFRTLYS   76 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~---~~~~~~~~~~~~~~   76 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......   .......++...+.
T Consensus        54 ~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (407)
T 3ju1_A           54 VVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYR  133 (407)
T ss_dssp             EEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 8999999999986542111   23445567777788


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN  156 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~  156 (312)
                      ++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|++||++|+
T Consensus       134 l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g~~A~~l~ltG~~i~  213 (407)
T 3ju1_A          134 LDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKMGLFLGLTAYHMN  213 (407)
T ss_dssp             HHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSSTTHHHHHHHHCCCBC
T ss_pred             HHHHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhHHHHHHHHHcCCcCc
Confidence            89999999999999999999999999999999999999999999999999999999999999999944999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCC-H----HHHHHHHHHhccc--cCCCcchhhhHHHHHHhhcCCCCHHH
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDD-P----SVIEACLEKYSDL--VYPDKNSVIHRIDIVDKCFGLDTVEE  229 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (312)
                      |+||+++||||+|||++++.+..+++.++.... +    ..+....+.+...  .......+......|++||+ +++++
T Consensus       214 A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~I~~~f~-~sv~~  292 (407)
T 3ju1_A          214 AADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDRLMA-GSLTD  292 (407)
T ss_dssp             HHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHHHHHHTC-SCHHH
T ss_pred             HHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHHHHHHhc-CCHHH
Confidence            999999999999999999987777765443322 1    1233333333222  12334456677889999999 99999


Q ss_pred             HHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410          230 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN  309 (312)
Q Consensus       230 ~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~  309 (312)
                      +++.|++...  ..+|+++++++|++.||.|++.+|++++++...+++++++.|.+++..++.   ++||+|||+||+++
T Consensus       293 i~~~L~~~~~--~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~---s~D~~EGvrAflid  367 (407)
T 3ju1_A          293 IVTRMSTLST--DEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCA---KGDFCEGVRALLID  367 (407)
T ss_dssp             HHHHHHHCCC--SCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH---HSSHHHHHHHHTTS
T ss_pred             HHHHHHhccc--ccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhc
Confidence            9999986422  479999999999999999999999999999999999999999999999998   99999999999954


Q ss_pred             C
Q 021410          310 K  310 (312)
Q Consensus       310 r  310 (312)
                      |
T Consensus       368 K  368 (407)
T 3ju1_A          368 K  368 (407)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=100.00  E-value=2.8e-61  Score=444.81  Aligned_cols=300  Identities=39%  Similarity=0.667  Sum_probs=265.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........ .....++...+.++.
T Consensus        18 ~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~-~~~~~~~~~~~~~~~   96 (363)
T 3bpt_A           18 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQ-KIAPVFFREEYMLNN   96 (363)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSC-CCHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhccccc-HHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999998 99999999998864321111 112234445567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE  159 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e  159 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|++||++|+|+|
T Consensus        97 ~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~~a~~l~ltg~~i~A~e  176 (363)
T 3bpt_A           97 AVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRD  176 (363)
T ss_dssp             HHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTHHHHHHHHCCCEETHH
T ss_pred             HHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHHHHHHHHHcCCCCCHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999977999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccC---CCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY---PDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+++||||+|+|++++.+.+..+.++...++..+..+++.+.....   +....+......|++||+.+++.++++.+++
T Consensus       177 A~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~ei~~al~~  256 (363)
T 3bpt_A          177 VYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQ  256 (363)
T ss_dssp             HHHTTSCSEECCGGGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTTSSSHHHHHHHHHH
T ss_pred             HHHCCCcceecCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhCCCCHHHHHHHHhc
Confidence            9999999999999998876777777777788899988888864332   2234455567899999999999999999987


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeec
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL  308 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~  308 (312)
                      .    ..+|+.+++++|+++||.|++.+|++++++...+++++++.|.+.+..++.   ++||+||++||++
T Consensus       257 ~----~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~---s~D~~EGv~Afl~  321 (363)
T 3bpt_A          257 D----GSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMR---GHDFHEGVRAVLI  321 (363)
T ss_dssp             H----CCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---SSHHHHHHHHHTT
T ss_pred             c----ChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc---CccHHhhhhheee
Confidence            5    568999999999999999999999999999989999999999999999887   9999999999994

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=100.00  E-value=3.1e-61  Score=425.09  Aligned_cols=236  Identities=27%  Similarity=0.327  Sum_probs=219.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++...     ......+...++.++..
T Consensus        12 ~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-----~~~~~~~~~~~~~~~~~   86 (254)
T 3hrx_A           12 VLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR-----KPDYEAHLRRYNRVVEA   86 (254)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS-----CCCHHHHTHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhccc-----chhhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532     11223455667788899


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++|+|+|
T Consensus        87 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~e  166 (254)
T 3hrx_A           87 LSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEE  166 (254)
T ss_dssp             HHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++.+.+..+                                                         
T Consensus       167 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  189 (254)
T 3hrx_A          167 ALALGLVHRVVPAEKLMEEALSL---------------------------------------------------------  189 (254)
T ss_dssp             HHHHTSCSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCeEEecCcHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999999887554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|+++++....+++++++.|...+..++.   |+|++||++||++||+
T Consensus       190 ----------a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~Eg~~AF~eKR~  248 (254)
T 3hrx_A          190 ----------AKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAGQ---TQDHEEGVRAFREKRP  248 (254)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                      8999999999999999999999999999999999999999998   9999999999999996

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=8.8e-61  Score=425.87  Aligned_cols=241  Identities=25%  Similarity=0.344  Sum_probs=216.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........+....+.+.++.++..
T Consensus        27 ~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  106 (274)
T 4fzw_C           27 TLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRR  106 (274)
T ss_dssp             EEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHHHHHHTHHHHHHH
T ss_pred             EEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875433222333444555666788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++|+|+|
T Consensus       107 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~e  186 (274)
T 4fzw_C          107 LAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQ  186 (274)
T ss_dssp             HHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHHHHHHCCCEEHHH
T ss_pred             HHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHHHHHhCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++.+.+.++                                                         
T Consensus       187 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  209 (274)
T 4fzw_C          187 AHEWGMIWQVVDDETLADTAQQL---------------------------------------------------------  209 (274)
T ss_dssp             HHHTTSSSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCceEEeChHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|...+..++.   |+|++||++||++||+
T Consensus       210 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~Egv~AF~eKR~  268 (274)
T 4fzw_C          210 ----------ARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGR---SADYREGVSAFLAKRS  268 (274)
T ss_dssp             ----------HHHHTTSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHC-CC
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhCCCC
Confidence                      8999999999999999999999999999999999999998887   9999999999999986

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=2.4e-60  Score=419.76  Aligned_cols=235  Identities=23%  Similarity=0.289  Sum_probs=217.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    +  ....+......++..
T Consensus        17 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~--~~~~~~~~~~~~~~~   90 (258)
T 4fzw_A           17 LLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEK----D--LAATLNDTRPQLWAR   90 (258)
T ss_dssp             EEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTC----C--HHHHHTCSHHHHHHH
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccc----h--hhhHHHhHHHHHHHH
Confidence            5999999999999999999999999999999999999999999999999999987532    1  222333445677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||+.|+|+|
T Consensus        91 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i~a~e  170 (258)
T 4fzw_A           91 LQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQ  170 (258)
T ss_dssp             HHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHcCCcCcHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++.+.+.+                                                          
T Consensus       171 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  192 (258)
T 4fzw_A          171 AQQAGLVSDVFPSDLTLEYALQ----------------------------------------------------------  192 (258)
T ss_dssp             HHHHTSCSEEECTTTHHHHHHH----------------------------------------------------------
T ss_pred             HHHCCCeeEEeCchHHHHHHHH----------------------------------------------------------
Confidence            9999999999999998755443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|++.||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||++||++||+
T Consensus       193 ---------~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~Eg~~AF~eKR~  252 (258)
T 4fzw_A          193 ---------LASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAA---TEDRHEGISAFLQKRT  252 (258)
T ss_dssp             ---------HHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhCCCC
Confidence                     38999999999999999999999999999999999999999998   9999999999999986

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=100.00  E-value=4.3e-58  Score=407.02  Aligned_cols=237  Identities=22%  Similarity=0.315  Sum_probs=221.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...    +......+....+.++.
T Consensus        21 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   96 (265)
T 3kqf_A           21 KISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGM----NEEQVRHAVSMIRTTME   96 (265)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhcc----CHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 999999999987532    34455566777788999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.|+|+
T Consensus        97 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~  176 (265)
T 3kqf_A           97 MVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQ  176 (265)
T ss_dssp             HHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       177 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  199 (265)
T 3kqf_A          177 EAKEYGLVEFVVPVHLLEEKAIE---------------------------------------------------------  199 (265)
T ss_dssp             HHHHHTSCSEEECGGGHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCccEEeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887754443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       200 ----------~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  259 (265)
T 3kqf_A          200 ----------IAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIH---TKDRLEGLQAFKEKRT  259 (265)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                      37899999999999999999999999999999999999999998   9999999999999986

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=100.00  E-value=6.8e-58  Score=408.84  Aligned_cols=241  Identities=22%  Similarity=0.280  Sum_probs=222.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..............+...++.++..
T Consensus        29 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (279)
T 3g64_A           29 TVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRA  108 (279)
T ss_dssp             EEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999987654333333444566667788999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCccccc-CCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~-p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|++++|.. +.+|++||+.|+|+
T Consensus       109 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~  188 (279)
T 3g64_A          109 VRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAP  188 (279)
T ss_dssp             HHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHHHHHHHcCCCcCHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       189 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  212 (279)
T 3g64_A          189 EAERIGLISELTEEGRADEAARTL--------------------------------------------------------  212 (279)
T ss_dssp             HHHHHTCCSEECCTTCHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCCCEecCchHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999987555433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       213 -----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  271 (279)
T 3g64_A          213 -----------ARRLADGPALAHAQTKALLTAELDMPLAAAVELDASTQALLMT---GEDYAEFHAAFTEKRP  271 (279)
T ss_dssp             -----------HHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHTTSC
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                       8999999999999999999999989999999999999999988   9999999999999985

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=100.00  E-value=9.1e-58  Score=405.20  Aligned_cols=239  Identities=19%  Similarity=0.254  Sum_probs=217.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... .........+...++.++..
T Consensus        16 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   94 (268)
T 3i47_A           16 LLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMA-NFTEEENLEDSLVLGNLMYS   94 (268)
T ss_dssp             EEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHH-TCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccc-cccHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999986542 22233333455667788899


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|.. +++|++||++|+|+|
T Consensus        95 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~~llltg~~i~A~e  173 (268)
T 3i47_A           95 ISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAKMLFMSAEVFDATR  173 (268)
T ss_dssp             HHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHHHHHHHCCEEEHHH
T ss_pred             HHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHHHHHHcCCccCHHH
Confidence            999999999999999999999999999999999999999999999999999887 789999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       174 A~~~GLV~~vv~~~~l~~~a~~----------------------------------------------------------  195 (268)
T 3i47_A          174 AYSLNLVQHCVPDDTLLEFTLK----------------------------------------------------------  195 (268)
T ss_dssp             HHHTTSCSEEECGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCCcEeeChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999999888755443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHH-HHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDE-CLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~-~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|++.||.+++.+|++++.....++++ .++.|.+.+..++.   |+|++||+++|++||+
T Consensus       196 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~---s~d~~eg~~AF~ekR~  256 (268)
T 3i47_A          196 ---------YASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRV---SDEGQEGLKAFLNKEI  256 (268)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHH---SHHHHHHHHHHHHTCC
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                     389999999999999999999998888888 78999999999998   9999999999999986

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=100.00  E-value=8.8e-58  Score=404.16  Aligned_cols=237  Identities=22%  Similarity=0.295  Sum_probs=217.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...   ........+....+.++..
T Consensus        18 ~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~   93 (261)
T 3pea_A           18 VATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSV---TEAKQATELAQLGQVTFER   93 (261)
T ss_dssp             EEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTT---CCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhc---CchhHHHHHHHHHHHHHHH
Confidence            589999999 999999999999999999999999999999999999999999987542   1223334445555678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.++++||+.|+|+|
T Consensus        94 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~e  173 (261)
T 3pea_A           94 VEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAE  173 (261)
T ss_dssp             HHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       174 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  196 (261)
T 3pea_A          174 ALKWGLVNGVFAEETFLDDTLKV---------------------------------------------------------  196 (261)
T ss_dssp             HHHHTSSSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCccEecCHHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877544433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       197 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  255 (261)
T 3pea_A          197 ----------AKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVFT---SEDGREGVAAFLEKRK  255 (261)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                      7899999999999999999998888899999999999999998   9999999999999986

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=100.00  E-value=2.7e-57  Score=406.54  Aligned_cols=241  Identities=22%  Similarity=0.283  Sum_probs=214.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCC---hHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK---LEECKDFFRTLYSF   77 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---~~~~~~~~~~~~~~   77 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........   ......+...++.+
T Consensus        36 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (290)
T 3sll_A           36 LVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEV  115 (290)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998754321111   12244566677888


Q ss_pred             HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCC-CchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD-AGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~-~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      +..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|++++|.. +.++++||+.|
T Consensus       116 ~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~~~A~~llltG~~i  195 (290)
T 3sll_A          116 ILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRDV  195 (290)
T ss_dssp             HHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred             HHHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCHHHHHHHHHcCCCC
Confidence            99999999999999999999999999999999999999999999999999999 99999999999998 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+|+|++++.+.+.+                                                      
T Consensus       196 ~A~eA~~~GLV~~vv~~~~l~~~a~~------------------------------------------------------  221 (290)
T 3sll_A          196 DADEAERIGLVSRKVASESLLEECYA------------------------------------------------------  221 (290)
T ss_dssp             EHHHHHHHTSSSEEECGGGHHHHHHH------------------------------------------------------
T ss_pred             CHHHHHHCCCccEEeChhHHHHHHHH------------------------------------------------------
Confidence            99999999999999999887654443                                                      


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhh-hcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGV-SRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~-~~~~~~d~~eg~~a~l~~r~  311 (312)
                                   ++++|+..||.+++.+|++++.... .+++++++.|...+..++ .   ++|++||+++|++||+
T Consensus       222 -------------~a~~la~~~~~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~---s~d~~eg~~AFlekR~  283 (290)
T 3sll_A          222 -------------IGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLGQLYVRLL---TDNFEEATAARKEKRP  283 (290)
T ss_dssp             -------------HHHHHHHSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHTTSC
T ss_pred             -------------HHHHHHcCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                         3899999999999999999999988 899999999999999988 8   9999999999999986

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=100.00  E-value=1.9e-57  Score=402.50  Aligned_cols=241  Identities=19%  Similarity=0.272  Sum_probs=216.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCce-eccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF-CAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F-~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|+.| |+|+|++++.......+......+...++.++.
T Consensus        16 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (263)
T 3lke_A           16 YITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVL   95 (263)
T ss_dssp             EEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999 999999998752112234455567777888999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus        96 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~~l~ltg~~~~a~  175 (263)
T 3lke_A           96 EIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSE  175 (263)
T ss_dssp             HHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecC-CCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          159 EMMACGLATHYSV-SEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       159 eA~~~Glv~~vv~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      ||+++||||+|+| ++++.+.+.+                                                        
T Consensus       176 eA~~~GLv~~vv~~~~~l~~~a~~--------------------------------------------------------  199 (263)
T 3lke_A          176 EALRLGLIQEICENKQELQERVKN--------------------------------------------------------  199 (263)
T ss_dssp             HHHHHTSSSEEESSHHHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHcCCCcEecCChhHHHHHHHH--------------------------------------------------------
Confidence            9999999999999 7776654443                                                        


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 .+++|++.||.+++.+|++++.....+++++++.|...+..++.   |+|++||+++|+++++
T Consensus       200 -----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~e~~~~~~~~~~  259 (263)
T 3lke_A          200 -----------YLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQETEELVALFK---QTEIKKRLEALVEGHH  259 (263)
T ss_dssp             -----------HHHHHHTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT---SHHHHHHHHHC-----
T ss_pred             -----------HHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc---CHHHHHHHHhhhccCC
Confidence                       38999999999999999999998888999999999999999998   9999999999999986

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=6.2e-58  Score=404.35  Aligned_cols=238  Identities=21%  Similarity=0.258  Sum_probs=178.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.........   ..+...++.++..
T Consensus        18 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~---~~~~~~~~~~~~~   94 (256)
T 3qmj_A           18 TLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNF---SEGKFGFRGLIKA   94 (256)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSC---CCCSSHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhH---HHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999998654322110   0112334677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||++|+|+|
T Consensus        95 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~e  174 (256)
T 3qmj_A           95 LAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEE  174 (256)
T ss_dssp             HHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHHHHHSCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       175 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  197 (256)
T 3qmj_A          175 ALRMGLVWRICSPEELLPEARRH---------------------------------------------------------  197 (256)
T ss_dssp             HHHHTSSSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCccEEeCHhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       198 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  256 (256)
T 3qmj_A          198 ----------AEILAAKPISSLMAVKHTMVEPNRAQIAAASARENAHFAELMG---AQANAAALADFTDRRR  256 (256)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHCC----------------------------------------
T ss_pred             ----------HHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHccCC
Confidence                      8999999999999999999999888999999999999998888   9999999999999985

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.3e-57  Score=405.31  Aligned_cols=235  Identities=23%  Similarity=0.198  Sum_probs=216.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.++++++  |+++|+|||||.|++||+|+|++++..    .+......+...++.++..
T Consensus        28 ~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~~  101 (275)
T 3hin_A           28 TIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRE----RDATEGLVHSQTWHRVFDK  101 (275)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCC----CCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhc----cChhhHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999  678999999999999999999998753    2233344556667788899


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++|+|+|
T Consensus       102 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~i~A~e  181 (275)
T 3hin_A          102 IQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAE  181 (275)
T ss_dssp             HHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++.+.+.+                                                          
T Consensus       182 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  203 (275)
T 3hin_A          182 GVVHGFSQYLIENGSAYDKALE----------------------------------------------------------  203 (275)
T ss_dssp             HHHHTSCSEEESSSCHHHHHHH----------------------------------------------------------
T ss_pred             HHHCCCCCEEeChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999999998754443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|++.||.+++.+|+++++....+++++++.|...+..++.   |+|++||+++|++||+
T Consensus       204 ---------~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekR~  263 (275)
T 3hin_A          204 ---------LGNRVAQNAPLTNFAVLQALPMIAEANPQTGLLMESLMATVAQS---DQEAKTRIRAFLDHKT  263 (275)
T ss_dssp             ---------HHHHHTTSCHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHH---SHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                     38999999999999999999999999999999999999999888   9999999999999984

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=100.00  E-value=3.1e-57  Score=399.33  Aligned_cols=231  Identities=24%  Similarity=0.350  Sum_probs=214.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..      .    .+...++.++..
T Consensus        18 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~------~----~~~~~~~~~~~~   87 (255)
T 3p5m_A           18 RIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT------A----GAADAANRVVRA   87 (255)
T ss_dssp             EEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CH------H----HHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcc------h----HHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998641      1    345566788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+|
T Consensus        88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~e  167 (255)
T 3p5m_A           88 ITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAAT  167 (255)
T ss_dssp             HHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       168 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  190 (255)
T 3p5m_A          168 AFEWGMISHITSADEYESVLTDV---------------------------------------------------------  190 (255)
T ss_dssp             HHHTTSCSEECCTTCHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCCCEeeCHHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999999987655443                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       191 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  249 (255)
T 3p5m_A          191 ----------LRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVE---TADFREGARAFRERRT  249 (255)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                      7899999999999999999999889999999999999999988   9999999999999985

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.1e-57  Score=402.39  Aligned_cols=236  Identities=20%  Similarity=0.274  Sum_probs=217.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....  .+......+...++.++..
T Consensus        40 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~  117 (276)
T 3rrv_A           40 IITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELS--ADADLRAKTIRDGREIVLG  117 (276)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHH--HCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcc--cchHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999986532  1233445566677888999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.|+|+|
T Consensus       118 l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~e  197 (276)
T 3rrv_A          118 MARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQR  197 (276)
T ss_dssp             HHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+  +++.+.+.+                                                          
T Consensus       198 A~~~GLv~~vv--~~l~~~a~~----------------------------------------------------------  217 (276)
T 3rrv_A          198 AVELGLANHVA--DDPVAEAIA----------------------------------------------------------  217 (276)
T ss_dssp             HHHHTSCSEEE--SSHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCHHHHH--HHHHHHHHH----------------------------------------------------------
Confidence            99999999999  677654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                               .+++|+..||.+++.+|++++.....+++++++.|...+..++.   |+|++||+++|++||
T Consensus       218 ---------~A~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekR  276 (276)
T 3rrv_A          218 ---------CAKKILELPQQAVESTKRVLNIHLERAVLASLDYALSAESQSFV---TEDFRSIVTKLADKN  276 (276)
T ss_dssp             ---------HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHCCC
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCC
Confidence                     38999999999999999999988888899999999999998887   999999999999987

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-57  Score=403.16  Aligned_cols=235  Identities=25%  Similarity=0.293  Sum_probs=215.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    ....  .+...++.++..
T Consensus        22 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~--~~~~~~~~~~~~   95 (263)
T 3moy_A           22 LIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTL----TPHQ--ARERNLLSGWDS   95 (263)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTC----CHHH--HHHTTTTHHHHH
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhcc----Cchh--HHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532    1211  223344567888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+|
T Consensus        96 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~e  175 (263)
T 3moy_A           96 LTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEE  175 (263)
T ss_dssp             HTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHH
T ss_pred             HHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       176 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  197 (263)
T 3moy_A          176 AERVGLVSRIVPAADLLDEALA----------------------------------------------------------  197 (263)
T ss_dssp             HHHTTSCSEEECGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHHCCCccEecCchHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       198 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekR~  257 (263)
T 3moy_A          198 ---------VAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFD---THDQTEGMTAFLEKRT  257 (263)
T ss_dssp             ---------HHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhCCC
Confidence                     38899999999999999999999999999999999999999988   9999999999999986

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-56  Score=401.60  Aligned_cols=237  Identities=18%  Similarity=0.216  Sum_probs=220.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..   .........+...++.++..
T Consensus        38 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~---~~~~~~~~~~~~~~~~~~~~  114 (286)
T 3myb_A           38 TLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRA---EPSREYYEKLFARCTDVMLA  114 (286)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHS---SCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhc---cccHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998864   23344556677778889999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|.. +.+|++||+.|+|+|
T Consensus       115 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~~A~~llltG~~i~A~e  193 (286)
T 3myb_A          115 IQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRKAAFEMLVTGEFVSADD  193 (286)
T ss_dssp             HHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHHHHHHHHHHCCCEEHHH
T ss_pred             HHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHHHHHHHHHcCCCCCHHH
Confidence            999999999999999999999999999999999999999999999999 788999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       194 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  216 (286)
T 3myb_A          194 AKGLGLVNRVVAPKALDDEIEAM---------------------------------------------------------  216 (286)
T ss_dssp             HHHHTSCSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCCcEecCHHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999988887555433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       217 ----------a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~egi~aFlekr~  275 (286)
T 3myb_A          217 ----------VSKIVAKPRAAVAMGKALFYRQIETDIESAYADAGTTMACNMM---DPSALEGVSAFLEKRR  275 (286)
T ss_dssp             ----------HHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHccCC
Confidence                      7899999999999999999999889999999999999999998   9999999999999986

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=100.00  E-value=3e-57  Score=403.48  Aligned_cols=235  Identities=25%  Similarity=0.375  Sum_probs=213.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    ....  .+.......+..
T Consensus        37 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~--~~~~~~~~~~~~  110 (278)
T 3h81_A           37 IITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADL----TFAD--AFTADFFATWGK  110 (278)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTC----CHHH--HHHHTTTGGGHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhcc----Chhh--HHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999988642    1111  122222223677


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.+|++||+.++|+|
T Consensus       111 l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~e  190 (278)
T 3h81_A          111 LAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAE  190 (278)
T ss_dssp             HHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       191 A~~~GLv~~vv~~~~l~~~a~-----------------------------------------------------------  211 (278)
T 3h81_A          191 AERSGLVSRVVPADDLLTEAR-----------------------------------------------------------  211 (278)
T ss_dssp             HHHHTSCSEEECGGGHHHHHH-----------------------------------------------------------
T ss_pred             HHHCCCccEEeChhHHHHHHH-----------------------------------------------------------
Confidence            999999999999988765443                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +++++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       212 --------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekR~  272 (278)
T 3h81_A          212 --------ATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFA---TEDQSEGMAAFIEKRA  272 (278)
T ss_dssp             --------HHHHHHHTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHTTSC
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                    348999999999999999999999999999999999999999988   9999999999999986

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=100.00  E-value=7.6e-57  Score=401.53  Aligned_cols=239  Identities=20%  Similarity=0.252  Sum_probs=214.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC---Ch----HHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---KL----EECKDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~~----~~~~~~~~~   73 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......   +.    .....+...
T Consensus        16 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (275)
T 1dci_A           16 HVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISR   95 (275)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHH
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhhhhhHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999886532111   11    112233445


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChH-H-HHHHHhc
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-L-GEFLALT  151 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-~-a~~l~lt  151 (312)
                      ++.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|. . +++|++|
T Consensus        96 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~l~lt  175 (275)
T 1dci_A           96 YQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFT  175 (275)
T ss_dssp             HHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHHHHHc
Confidence            6677888999999999999999999999999999999999999999999999999999999999999998 8 9999999


Q ss_pred             CCCCCHHHHHHcCccceecCC-CChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHH
Q 021410          152 GAKLNGAEMMACGLATHYSVS-EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI  230 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (312)
                      |+.|+|+||+++||||+|+|+ +++.+.+.                                                  
T Consensus       176 g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~--------------------------------------------------  205 (275)
T 1dci_A          176 ARKMMADEALDSGLVSRVFPDKDVMLNAAF--------------------------------------------------  205 (275)
T ss_dssp             CCEEEHHHHHHHTSSSEEESSHHHHHHHHH--------------------------------------------------
T ss_pred             CCCCCHHHHHHcCCcceecCChHHHHHHHH--------------------------------------------------
Confidence            999999999999999999998 66654333                                                  


Q ss_pred             HHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeecc
Q 021410          231 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILN  309 (312)
Q Consensus       231 ~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~  309 (312)
                                       +++++|++.||.+++.+|++++.+...+++++++.|...+..++.   ++|++||+++|++|
T Consensus       206 -----------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ek  264 (275)
T 1dci_A          206 -----------------ALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQ---TQDIIKSVQAAMEK  264 (275)
T ss_dssp             -----------------HHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTS---SHHHHHHHHHHHTT
T ss_pred             -----------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhc
Confidence                             338999999999999999999999888999999999999988887   99999999999998

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=100.00  E-value=4e-57  Score=400.88  Aligned_cols=236  Identities=21%  Similarity=0.297  Sum_probs=207.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...........  .+....+.++..
T Consensus        17 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~--~~~~~~~~~~~~   94 (266)
T 3fdu_A           17 TLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGP--AGQVPPFVLLKS   94 (266)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSC--GGGSHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhh--HHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999999863211111100  122345567888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+|
T Consensus        95 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~i~A~e  174 (266)
T 3fdu_A           95 AARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAET  174 (266)
T ss_dssp             HHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHHH
T ss_pred             HHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHHHHHhCCCcCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|  ++.+.+.                                                           
T Consensus       175 A~~~GLv~~vv~--~l~~~a~-----------------------------------------------------------  193 (266)
T 3fdu_A          175 ALQAGLVNEIVE--DAYATAQ-----------------------------------------------------------  193 (266)
T ss_dssp             HHHTTSCSEECS--CHHHHHH-----------------------------------------------------------
T ss_pred             HHHCCCHHHHHH--HHHHHHH-----------------------------------------------------------
Confidence            999999999998  6654433                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +++++|++.||.+++.+|++++... .+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       194 --------~~a~~la~~~~~a~~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~---s~d~~eg~~aF~ekR~  253 (266)
T 3fdu_A          194 --------ATAQHLTALPLASLKQTKALMKHDL-DQIIECIDHEAEIFMQRVQ---SPEMLEAVQAFMQKRQ  253 (266)
T ss_dssp             --------HHHHHHHTSCHHHHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHC----
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                    3489999999999999999999875 5799999999999999998   9999999999999985

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=100.00  E-value=1e-56  Score=400.42  Aligned_cols=240  Identities=22%  Similarity=0.314  Sum_probs=195.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHH-HH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF-IY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..............+....+.+ +.
T Consensus        21 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (276)
T 2j5i_A           21 FVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWK  100 (276)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHTT
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875322111111122232323343 56


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+
T Consensus       101 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~  180 (276)
T 2j5i_A          101 LLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQ  180 (276)
T ss_dssp             TTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHHHCCEEEHH
T ss_pred             HHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCcccHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       181 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  203 (276)
T 2j5i_A          181 KAAEMGLVNESVPLAQLREVTIE---------------------------------------------------------  203 (276)
T ss_dssp             HHHHHTSSSEEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHcCCccEeeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998777654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHh--hhcCCCC-ChhhhhheeeccC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQG--VSRLISG-DFYEVSNFQILNK  310 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~--~~~~~~~-d~~eg~~a~l~~r  310 (312)
                                ++++|++.||.+++.+|++++.....+++++++.|...+...  +.   ++ |++||+++|++||
T Consensus       204 ----------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---s~~d~~eg~~AF~ekr  265 (276)
T 2j5i_A          204 ----------LARNLLEKNPVVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLLD---TEGGREQGMKQFLDDK  265 (276)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcC---ChHHHHHHHHHHHhcc
Confidence                      389999999999999999999998889999999888776554  44   78 9999999999998

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=100.00  E-value=8.8e-57  Score=399.76  Aligned_cols=241  Identities=21%  Similarity=0.257  Sum_probs=215.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-cCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..... .+..+....+...+++++.
T Consensus        15 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (269)
T 1nzy_A           15 EITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIH   94 (269)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998642100 0001111244455678888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+
T Consensus        95 ~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  174 (269)
T 1nzy_A           95 KIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPE  174 (269)
T ss_dssp             HHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHH
T ss_pred             HHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHHHHHcCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       175 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  197 (269)
T 1nzy_A          175 EAKDWGLVSRVYPKDEFREVAWK---------------------------------------------------------  197 (269)
T ss_dssp             HHHHHTSCSCEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCccEeeCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998776544433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       198 ----------~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~egi~af~ekr~  257 (269)
T 1nzy_A          198 ----------VARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVT---HPHFMPCLTRFLDGHR  257 (269)
T ss_dssp             ----------HHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH---STTHHHHHHHHHTTCC
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhcCC
Confidence                      37899999999999999999999888999999999999999998   9999999999999885

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.3e-56  Score=396.10  Aligned_cols=236  Identities=30%  Similarity=0.387  Sum_probs=210.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....   +.+.....  .+++++..
T Consensus        15 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~---~~~~~~~~--~~~~~~~~   89 (257)
T 2ej5_A           15 WLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEM---DHGDVLRS--RYAPMMKA   89 (257)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC----------CHHHHHHH--THHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhcc---chhHHHHH--HHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875421   11111111  25677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+|
T Consensus        90 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e  169 (257)
T 2ej5_A           90 LHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEE  169 (257)
T ss_dssp             HHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       170 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  191 (257)
T 2ej5_A          170 AAALGLATKVIPLSDWEEEVKQ----------------------------------------------------------  191 (257)
T ss_dssp             HHHHTCCSEEECGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCcceecChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|+..||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       192 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  251 (257)
T 2ej5_A          192 ---------FAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGL---TSDHREGVKAFFEKRK  251 (257)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH---SHHHHHHHHHHTTTCC
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---ChHHHHHHHHHhcCCC
Confidence                     37899999999999999999998888999999999999999988   9999999999999885

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=2.3e-56  Score=393.84  Aligned_cols=239  Identities=24%  Similarity=0.257  Sum_probs=214.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ............++.++..
T Consensus        11 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~   89 (253)
T 1uiy_A           11 VVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTE-LGAEENYRHSLSLMRLFHR   89 (253)
T ss_dssp             EEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTT-SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhccc-CCchhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998764310 0111111111125678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|.. +.++++||+.++|+|
T Consensus        90 i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~ltg~~~~a~e  168 (253)
T 1uiy_A           90 VYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLLTGRLVEARE  168 (253)
T ss_dssp             HHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHHHCCEEEHHH
T ss_pred             HHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHHhCCccCHHH
Confidence            9999999999999999999999999999999999999999999999999999 99999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       169 A~~~Glv~~vv~~~~l~~~a~~~---------------------------------------------------------  191 (253)
T 1uiy_A          169 AKALGLVNRIAPPGKALEEAKAL---------------------------------------------------------  191 (253)
T ss_dssp             HHHHTSCSEEECTTCHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCcceecChhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|++.||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       192 ----------a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~~kr~  250 (253)
T 1uiy_A          192 ----------AEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRE---TGDLAEGIRAFFEKRP  250 (253)
T ss_dssp             ----------HHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhCcCC
Confidence                      7899999999999999999999888999999999999999988   9999999999999885

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=100.00  E-value=1.3e-56  Score=394.69  Aligned_cols=237  Identities=15%  Similarity=0.193  Sum_probs=195.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEe-CCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+||||| .|++||+|+|++++...   .+.+....+...+++++.
T Consensus        12 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~   88 (250)
T 2a7k_A           12 VITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQL---SRSEDIEEWIDRVIDLYQ   88 (250)
T ss_dssp             EEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC----CHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhc---CchhhHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999 89999999999987532   112222345556678888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|.. +.++++||++|+|+
T Consensus        89 ~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ltg~~~~a~  167 (250)
T 2a7k_A           89 AVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAP  167 (250)
T ss_dssp             HHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHHHHCCCBCHH
T ss_pred             HHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHHHcCCcccHH
Confidence            9999999999999999999999999999999999999999999999999999999 999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       168 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  190 (250)
T 2a7k_A          168 RCVDYRLVNQVVESSALLDAAIT---------------------------------------------------------  190 (250)
T ss_dssp             HHHHHTCCSEEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHcCCcceecCHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998776544433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|+..||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||.
T Consensus       191 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  250 (250)
T 2a7k_A          191 ----------QAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAFQ---ARDAQGHFKNVLGKKY  250 (250)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------------
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhcCC
Confidence                      37899999999999999999988877899999999999888887   9999999999999874

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-56  Score=397.06  Aligned_cols=234  Identities=23%  Similarity=0.268  Sum_probs=207.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHH-HHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS-FIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++ .. .  .  . ....+....+. ++.
T Consensus        21 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~-~--~--~-~~~~~~~~~~~~~~~   93 (265)
T 3rsi_A           21 ILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DG-W--M--V-RDGSAPPLDPATIGK   93 (265)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------------CCCHHHHHH
T ss_pred             EEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-cc-c--c--c-chHHHHHHhHHHHHH
Confidence            58999999999999999999999999999999999999999999999999998 21 1  1  1 11123222345 777


Q ss_pred             HH-h--hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           80 LL-G--THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        80 ~l-~--~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      .+ .  ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.+
T Consensus        94 ~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~  173 (265)
T 3rsi_A           94 GLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPL  173 (265)
T ss_dssp             HTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCE
T ss_pred             HHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCC
Confidence            78 8  99999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+|+|++++.+.+.+                                                      
T Consensus       174 ~a~eA~~~GLv~~vv~~~~l~~~a~~------------------------------------------------------  199 (265)
T 3rsi_A          174 TAFEAYHFGLVGHVVPAGTALDKARS------------------------------------------------------  199 (265)
T ss_dssp             EHHHHHHTTSCSEEESTTCHHHHHHH------------------------------------------------------
T ss_pred             CHHHHHHCCCccEecChhHHHHHHHH------------------------------------------------------
Confidence            99999999999999999998755443                                                      


Q ss_pred             cccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                   ++++|+..||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       200 -------------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  259 (265)
T 3rsi_A          200 -------------LADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAIEARLTRPVIT---SADAREGLAAFKEKRE  259 (265)
T ss_dssp             -------------HHHHHHTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHTSC
T ss_pred             -------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                         38999999999999999999999889999999999999999998   9999999999999986

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=100.00  E-value=1.7e-56  Score=395.52  Aligned_cols=235  Identities=24%  Similarity=0.301  Sum_probs=213.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    ... ...+...+ +++..
T Consensus        17 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~-~~~~~~~~-~~~~~   90 (258)
T 2pbp_A           17 IIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKD----DPI-RLEWLNQF-ADWDR   90 (258)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTC----CHH-HHHHHCTT-HHHHH
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cch-hHHHHHHH-HHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532    111 12222223 56778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+|
T Consensus        91 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e  170 (258)
T 2pbp_A           91 LSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKE  170 (258)
T ss_dssp             HHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       171 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  192 (258)
T 2pbp_A          171 AEQLGIVNRVVSPELLMEETMR----------------------------------------------------------  192 (258)
T ss_dssp             HHHTTSCSEEECGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCcceeeChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999998887654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|+..||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       193 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  252 (258)
T 2pbp_A          193 ---------LAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLLFA---SEDQKEGMAAFLEKRK  252 (258)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTT---SHHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHccCC
Confidence                     37899999999999999999999889999999999999999887   9999999999999885

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=2.4e-56  Score=398.71  Aligned_cols=239  Identities=22%  Similarity=0.265  Sum_probs=202.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHH-HHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE-CKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~-~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++ +|||||.|++||+|+|++++.... ..+... ...+...+.+++.
T Consensus        38 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~  115 (280)
T 2f6q_A           38 KIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIP-PGGVEEKAKNNAVLLREFVG  115 (280)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCC-TTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcC-cchhhHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999 999999999999999999875321 111111 1223345567788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||++++|+
T Consensus       116 ~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~  195 (280)
T 2f6q_A          116 CFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAG  195 (280)
T ss_dssp             HHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHH
T ss_pred             HHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       196 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  219 (280)
T 2f6q_A          196 EACAQGLVTEVFPDSTFQKEVWTR--------------------------------------------------------  219 (280)
T ss_dssp             HHHHTTSCSEEECTTTHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCcceEECHHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999998887544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       220 -----------a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekR~  278 (280)
T 2f6q_A          220 -----------LKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWL---SDECTNAVVNFLSRKS  278 (280)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHT---SHHHHC----------
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHccCC
Confidence                       7889999999999999999988777899999999999999988   9999999999999985

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=100.00  E-value=2.2e-56  Score=395.48  Aligned_cols=240  Identities=20%  Similarity=0.236  Sum_probs=214.4

Q ss_pred             CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +|||| ||++.|++|.+|+.+|.++++.++.|+ +++|||||.|++||+|+|++++..............+...++.++.
T Consensus        17 ~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (261)
T 2gtr_A           17 HILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVN   95 (261)
T ss_dssp             EEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhhHHHHHHHHHHHHHH
Confidence            58999 699999999999999999999999987 4999999999999999999987643211111223344455677888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+
T Consensus        96 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  175 (261)
T 2gtr_A           96 TFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQ  175 (261)
T ss_dssp             HHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHHHHHcCCCCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       176 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  199 (261)
T 2gtr_A          176 EACGKGLVSQVFWPGTFTQEVMVR--------------------------------------------------------  199 (261)
T ss_dssp             HHHHTTSCSEEECGGGHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCcccccChhHHHHHHHHH--------------------------------------------------------
Confidence            999999999999988876544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||.
T Consensus       200 -----------a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  258 (261)
T 2gtr_A          200 -----------IKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWG---SAQGMDSMLKYLQRKI  258 (261)
T ss_dssp             -----------HHHHHTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH---STTTTHHHHHHHHHHH
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHccCC
Confidence                       7899999999999999999988877899999999999999998   9999999999998874

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=2.7e-56  Score=399.80  Aligned_cols=240  Identities=22%  Similarity=0.252  Sum_probs=211.0

Q ss_pred             CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +|||| ||++.|+||.+|+.+|.++++.++.|+. |+|||||.|++||+|+|++++..............+...+..++.
T Consensus        35 ~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (291)
T 2fbm_A           35 QIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVN  113 (291)
T ss_dssp             EEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccchhHHHHHHHHHHHHHH
Confidence            58999 6999999999999999999999999875 999999999999999999987642211111223344455667888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+
T Consensus       114 ~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el~ltg~~i~A~  193 (291)
T 2fbm_A          114 TFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAR  193 (291)
T ss_dssp             HHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEEHH
T ss_pred             HHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHHHHHcCCccCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       194 eA~~~GLV~~vv~~~~l~~~a~~~--------------------------------------------------------  217 (291)
T 2fbm_A          194 EACAKGLVSQVFLTGTFTQEVMIQ--------------------------------------------------------  217 (291)
T ss_dssp             HHHHTTSCSEEECSTTSHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCcceecChhHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999887554433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee-eccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ-ILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~-l~~r~  311 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++| ++||.
T Consensus       218 -----------a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~Af~~ekR~  277 (291)
T 2fbm_A          218 -----------IKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWS---SAQGIESMLKIPLLGYK  277 (291)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHT---SHHHHHHHHTC------
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHhcCCC
Confidence                       7899999999999999999988777899999999999999888   99999999999 99875

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=100.00  E-value=3.5e-56  Score=395.45  Aligned_cols=238  Identities=22%  Similarity=0.227  Sum_probs=209.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCCh-HHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL-EECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......... .....+...++.++.
T Consensus        23 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (267)
T 3oc7_A           23 RLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMR  102 (267)
T ss_dssp             EEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987621111111 112345667788899


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+ ++|.. +.++++||+.|+|+
T Consensus       103 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg~~~~a~  181 (267)
T 3oc7_A          103 AIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTGEKFDAR  181 (267)
T ss_dssp             HHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHCCCBCHH
T ss_pred             HHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcCCccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999 89998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|  ++++.+.+.+                                                         
T Consensus       182 eA~~~GLv~~v--~~~l~~~a~~---------------------------------------------------------  202 (267)
T 3oc7_A          182 RAEEIGLITMA--AEDLDAAIDQ---------------------------------------------------------  202 (267)
T ss_dssp             HHHHHTSSSEE--CSSHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCChhhh--hHHHHHHHHH---------------------------------------------------------
Confidence            99999999999  6777654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                ++++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       203 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  262 (267)
T 3oc7_A          203 ----------LVTDVGRGSPQGLAASKALTTAAVLERFDRDAERLAEESARLFV---SDEAREGMLAFLEKRS  262 (267)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHTCC
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                      38999999999999999999999888999999999999999998   9999999999999986

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.5e-56  Score=399.48  Aligned_cols=237  Identities=16%  Similarity=0.194  Sum_probs=216.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...   .+.+....+...++.++..
T Consensus        45 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~  121 (287)
T 2vx2_A           45 NIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEE---QGRDYHAEVFQTCSKVMMH  121 (287)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGG---GCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcc---cchhHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532   1223334455667788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |++++|.. +++|++||+.|+|+|
T Consensus       122 l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~llltg~~i~A~e  200 (287)
T 2vx2_A          122 IRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQE  200 (287)
T ss_dssp             HHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHHHHhCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999 99999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|||++++.+.+.++                                                         
T Consensus       201 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  223 (287)
T 2vx2_A          201 ALLHGLLSKVVPEAELQEETMRI---------------------------------------------------------  223 (287)
T ss_dssp             HHHHTSCSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCcceecCHHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999988876544433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       224 ----------a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~egi~af~ekr~  282 (287)
T 2vx2_A          224 ----------ARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLA---LRDGQEGITAFLQKRK  282 (287)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                      7899999999999999999998888999999999999999888   9999999999999885

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=100.00  E-value=1.1e-56  Score=400.84  Aligned_cols=237  Identities=25%  Similarity=0.279  Sum_probs=201.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.....   ...... ......++..
T Consensus        32 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~---~~~~~~-~~~~~~~~~~  107 (278)
T 4f47_A           32 IVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPP---GDSFKD-GSYDPSRIDA  107 (278)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC--------------------------CTTCBTT
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccch---hhhHHH-HHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998764321   111000 0112234455


Q ss_pred             Hh---hCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           81 LG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        81 l~---~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      +.   ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||+.|+
T Consensus       108 l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~  187 (278)
T 4f47_A          108 LLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHIT  187 (278)
T ss_dssp             TTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHHHHHHHHCCCEE
T ss_pred             HHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCC
Confidence            56   89999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+|+|++++.+.+.+                                                       
T Consensus       188 a~eA~~~GLv~~vv~~~~l~~~a~~-------------------------------------------------------  212 (278)
T 4f47_A          188 AAEAKEMGLVGHVVPDGQALTKALE-------------------------------------------------------  212 (278)
T ss_dssp             HHHHHHTTSCSEEECTTCHHHHHHH-------------------------------------------------------
T ss_pred             HHHHHHCCCceEeeChhHHHHHHHH-------------------------------------------------------
Confidence            9999999999999999998754443                                                       


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  ++++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       213 ------------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~Af~ekr~  272 (278)
T 4f47_A          213 ------------IAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIGIEVFL---SDDAKEGPQAFAQKRK  272 (278)
T ss_dssp             ------------HHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGGG---SSHHHHHHHHHHTTSC
T ss_pred             ------------HHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                        38999999999999999999999989999999999999999988   9999999999999986

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=100.00  E-value=8.5e-56  Score=392.58  Aligned_cols=235  Identities=19%  Similarity=0.192  Sum_probs=214.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEe-CCCceeccCCchhHHHhhccCChHHHHHHHHHH-HHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL-YSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (312)
                      +|||||| +.|++|.+|+.+|.++++.++.|+++|+||||| .|++||+|+|++++..    . ......+...+ ++++
T Consensus        21 ~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~----~-~~~~~~~~~~~~~~~~   94 (265)
T 2ppy_A           21 EIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS----A-DPRFKTQFCLFCNETL   94 (265)
T ss_dssp             EEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT----S-CHHHHHHHHHHHHHHH
T ss_pred             EEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc----c-chhHHHHHHHHHHHHH
Confidence            5899999 899999999999999999999999999999999 8999999999998753    1 12223344445 6788


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCce-eEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a-~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|++++|.. +.++++||+.|+
T Consensus        95 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~  174 (265)
T 2ppy_A           95 DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETIT  174 (265)
T ss_dssp             HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCBC
T ss_pred             HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHhCCccC
Confidence            89999999999999999999999999999999999999 9999999999999999999999999998 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+|+|++++.+.+.+                                                       
T Consensus       175 a~eA~~~GLv~~vv~~~~l~~~a~~-------------------------------------------------------  199 (265)
T 2ppy_A          175 PQEALEIGLVNRVFPQAETRERTRE-------------------------------------------------------  199 (265)
T ss_dssp             HHHHHHHTSSSEEECGGGHHHHHHH-------------------------------------------------------
T ss_pred             HHHHHHCCCcceecCHHHHHHHHHH-------------------------------------------------------
Confidence            9999999999999998887654443                                                       


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  .+++|+..||.+++.+|++++.+...+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       200 ------------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~egi~af~ekr~  259 (265)
T 2ppy_A          200 ------------YARKLANSATYAVSNIKLAIMNGKEMPLNVAIRYEGELQNLLFR---SEDAKEGLSAFLEKRQ  259 (265)
T ss_dssp             ------------HHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ------------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                        37899999999999999999999888999999999999999888   9999999999999885

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=100.00  E-value=3.2e-57  Score=400.43  Aligned_cols=233  Identities=21%  Similarity=0.223  Sum_probs=195.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..........      .....+...
T Consensus        23 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~------~~~~~~~~~   96 (262)
T 3r9q_A           23 TVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHP------HGPGPMGPS   96 (262)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCT------TSSCTTSST
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHH------hhhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875432110000      001123334


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||+.|+|+|
T Consensus        97 ~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~e  176 (262)
T 3r9q_A           97 RLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANE  176 (262)
T ss_dssp             TCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence            6689999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       177 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  199 (262)
T 3r9q_A          177 ALDIGLVNRVVARGQAREAAETL---------------------------------------------------------  199 (262)
T ss_dssp             HHHTTSCSEEECTTCHHHHHHHH---------------------------------------------------------
T ss_pred             HHHcCCccEecChhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999999987555433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|++.||.+++.+|++++.....+++++++.|.+ +..++.   + |++||++||++||+
T Consensus       200 ----------a~~la~~~~~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~---s-d~~Eg~~AF~ekr~  256 (262)
T 3r9q_A          200 ----------AAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFG-SIERVA---T-EALEGAGRFAAGEG  256 (262)
T ss_dssp             ----------HHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHH---C---------------
T ss_pred             ----------HHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhc---c-HHHHHHHHHHcCCC
Confidence                      899999999999999999999999999999999999 888887   8 99999999999986

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=100.00  E-value=3.5e-57  Score=406.88  Aligned_cols=241  Identities=21%  Similarity=0.207  Sum_probs=173.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHh--hccCCh--HHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHF--MNQGKL--EECKDFFRTLYS   76 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~--~~~~~~--~~~~~~~~~~~~   76 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...  ......  .....+....+.
T Consensus        42 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (298)
T 3qre_A           42 IITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGER  121 (298)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------------------C
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhccccccccccchhHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987641  100000  011122223345


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKL  155 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i  155 (312)
                      ++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||+.|
T Consensus       122 ~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltg~~i  201 (298)
T 3qre_A          122 PPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTF  201 (298)
T ss_dssp             CTTGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCHHHHHHHHHHCCEE
T ss_pred             HHHHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCHHHHHHHHHcCCCC
Confidence            66788899999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             CHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHH
Q 021410          156 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLE  235 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  235 (312)
                      +|+||+++||||+|+|++++.+.+.++                                                     
T Consensus       202 ~A~eA~~~GLV~~vv~~~~l~~~a~~~-----------------------------------------------------  228 (298)
T 3qre_A          202 LAEEAAQLGLVKEVVTPEQLMPRALEY-----------------------------------------------------  228 (298)
T ss_dssp             EHHHHHHTTSCSEEECGGGHHHHHHHH-----------------------------------------------------
T ss_pred             CHHHHHHcCCCeEecCHHHHHHHHHHH-----------------------------------------------------
Confidence            999999999999999998887555433                                                     


Q ss_pred             cccCCCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          236 SEASLINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       236 ~~~~~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                    +++|+.. ||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       229 --------------A~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~Egv~AF~ekR~  288 (298)
T 3qre_A          229 --------------AEDIARYCSPSSMAVIKRQVYGDATRDVVEATSHAEVLLREAMP---RPDVIEGIVSFLEKRP  288 (298)
T ss_dssp             --------------HHHHHHHSCHHHHHHHHHHHHGGGGC-------------------------------------
T ss_pred             --------------HHHHHccCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                          7899998 999999999999999999999999999999888887   9999999999999985

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.6e-57  Score=403.56  Aligned_cols=237  Identities=18%  Similarity=0.150  Sum_probs=212.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.........    .+.......+..
T Consensus        21 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~----~~~~~~~~~~~~   96 (265)
T 3swx_A           21 VIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGAS----LTPEGGINPWQV   96 (265)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CC----CCCTTCCCTTCC
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhH----HHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999998654321110    011112234456


Q ss_pred             H-hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 L-GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l-~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      + .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus        97 l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~  176 (265)
T 3swx_A           97 DGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAV  176 (265)
T ss_dssp             SSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHTTCCCEEHH
T ss_pred             HHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHHHcCCcCCHH
Confidence            7 899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       177 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  200 (265)
T 3swx_A          177 EAHRIGIVQEIVPVGEHVDTAIAI--------------------------------------------------------  200 (265)
T ss_dssp             HHHHTTSCSEEESTTCHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHcCCCCEecChhHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999887554433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       201 -----------a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  259 (265)
T 3swx_A          201 -----------AQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELFT---SEDATLGVQAFLSRTT  259 (265)
T ss_dssp             -----------HHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTCC
T ss_pred             -----------HHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence                       7999999999999999999999888999999999999999998   9999999999999985

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=100.00  E-value=9e-56  Score=391.71  Aligned_cols=238  Identities=18%  Similarity=0.217  Sum_probs=202.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhh--ccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM--NQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....  ...+......+...++.++
T Consensus        19 ~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (263)
T 3l3s_A           19 TLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALM   97 (263)
T ss_dssp             EEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHH
Confidence            589999999 9999999999999999999999999999999999999999999875421  1123445566777788899


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|.. ++++++||++|+|
T Consensus        98 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~~~A~~l~ltg~~~~A  176 (263)
T 3l3s_A           98 LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGRRAVTEMALTGATYDA  176 (263)
T ss_dssp             HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCHHHHHHHHHHCCEEEH
T ss_pred             HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCHHHHHHHHHcCCCCCH
Confidence            99999999999999999999999999999999999999999999999999 577899999999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++||||+|+|++++.+.+.+                                                        
T Consensus       177 ~eA~~~GLv~~vv~~~~l~~~a~~--------------------------------------------------------  200 (263)
T 3l3s_A          177 DWALAAGLINRILPEAALATHVAD--------------------------------------------------------  200 (263)
T ss_dssp             HHHHHHTSSSEECCHHHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHHCCCccEEeCHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999998777654443                                                        


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                                 .+++|++.||.+++.+|++++.....+++++++.|.+.+..++.   |+|++||++||.+.-
T Consensus       201 -----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~Eg~~Af~~~~  259 (263)
T 3l3s_A          201 -----------LAGALAARNQAPLRRGLETLNRHLELPLEQAYALATPVMVEHFM---DPGRRHLDWIDEGHH  259 (263)
T ss_dssp             -----------HHHHHHSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC------------------
T ss_pred             -----------HHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHhhccC
Confidence                       38999999999999999999999999999999999999999998   999999999998643

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=100.00  E-value=2.1e-56  Score=395.30  Aligned_cols=235  Identities=24%  Similarity=0.342  Sum_probs=211.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    ...  ..+...+...+..
T Consensus        19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~--~~~~~~~~~~~~~   92 (260)
T 1mj3_A           19 LIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNR----TFQ--DCYSGKFLSHWDH   92 (260)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTC----CHH--HHHHC--CCGGGG
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcc----cch--HHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999999999986421    111  1122222233567


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.++|+|
T Consensus        93 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~e  172 (260)
T 1mj3_A           93 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD  172 (260)
T ss_dssp             GGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       173 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  194 (260)
T 1mj3_A          173 AKQAGLVSKIFPVETLVEEAIQ----------------------------------------------------------  194 (260)
T ss_dssp             HHHHTSCSEEECTTTHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCccEEeChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999999888654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++|+..||.+++.+|++++.+...+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       195 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~egi~af~~kr~  254 (260)
T 1mj3_A          195 ---------CAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFA---TDDRREGMSAFVEKRK  254 (260)
T ss_dssp             ---------HHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGG---SHHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                     37899999999999999999999888999999999999999988   9999999999999885

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=100.00  E-value=4.4e-56  Score=395.59  Aligned_cols=241  Identities=21%  Similarity=0.250  Sum_probs=217.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++...    .......+...++.++.
T Consensus        24 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~   99 (272)
T 1hzd_A           24 VLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKM----SSSEVGPFVSKIRAVIN   99 (272)
T ss_dssp             EEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTS----CHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhcc----ChHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999998 799999999987532    22333445566778888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+
T Consensus       100 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~  179 (272)
T 1hzd_A          100 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGK  179 (272)
T ss_dssp             HHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHH
T ss_pred             HHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+...                                                          
T Consensus       180 eA~~~GLv~~vv~~~~l~~~~~----------------------------------------------------------  201 (272)
T 1hzd_A          180 EAKAVGLISHVLEQNQEGDAAY----------------------------------------------------------  201 (272)
T ss_dssp             HHHHHTSCSEEECCCTTSCHHH----------------------------------------------------------
T ss_pred             HHHHCCCcceecChhhhhHHHH----------------------------------------------------------
Confidence            9999999999999988753211                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                           +++.+++++|+..||.+++.+|++++.+...+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       202 -----~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~egi~af~ekr~  266 (272)
T 1hzd_A          202 -----RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIP---TKDRLEGLLAFKEKRP  266 (272)
T ss_dssp             -----HHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTT---CHHHHHHHHHHTTTSC
T ss_pred             -----HHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence                 1223457888999999999999999999888999999999999988887   9999999999999985

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=100.00  E-value=1.1e-56  Score=400.06  Aligned_cols=240  Identities=21%  Similarity=0.275  Sum_probs=207.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc--cC-ChHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--QG-KLEECKDFFRTLYSF   77 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~-~~~~~~~~~~~~~~~   77 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....  .. ........+..++.+
T Consensus        23 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (274)
T 3tlf_A           23 TITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEG  102 (274)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTTCSGGGGSCCCTT
T ss_pred             EEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchhhHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998764321  00 000001111223456


Q ss_pred             HHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCC--C
Q 021410           78 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA--K  154 (312)
Q Consensus        78 ~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~--~  154 (312)
                      +..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.. +.+|++||+  .
T Consensus       103 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~~A~~l~ltg~~~~  181 (274)
T 3tlf_A          103 TPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRSIALRMALMGKHER  181 (274)
T ss_dssp             CCCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHHHHHHHHHHGGGCC
T ss_pred             HHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHHHHHHHHHcCCCCc
Confidence            6778899999999999999999999999999999999999999999999999 99999999999999 999999999  9


Q ss_pred             CCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHH
Q 021410          155 LNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSL  234 (312)
Q Consensus       155 i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  234 (312)
                      |+|+||+++||||+|+|++++.+.+.+                                                     
T Consensus       182 ~~A~eA~~~GLv~~vv~~~~l~~~a~~-----------------------------------------------------  208 (274)
T 3tlf_A          182 MSAQRAYELGLISEIVEHDRLLERAHE-----------------------------------------------------  208 (274)
T ss_dssp             EEHHHHHHHTSSSEEECGGGHHHHHHH-----------------------------------------------------
T ss_pred             cCHHHHHHCCCCCeecCHHHHHHHHHH-----------------------------------------------------
Confidence            999999999999999998887754443                                                     


Q ss_pred             HcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          235 ESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       235 ~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                    ++++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       209 --------------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  268 (274)
T 3tlf_A          209 --------------IADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAETFRERVLR---TEDAAEGPRAFVEKRQ  268 (274)
T ss_dssp             --------------HHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             --------------HHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                          48999999999999999999999989999999999999999998   9999999999999986

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=6e-56  Score=393.23  Aligned_cols=237  Identities=18%  Similarity=0.199  Sum_probs=214.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++ +..... .+.+....+...+++++..
T Consensus        23 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~-~~~~~~~~~~~~~~~~~~~   99 (264)
T 1wz8_A           23 EITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMR-ASHEALLRVFWEARDLVLG   99 (264)
T ss_dssp             EEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHH-HCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccc-cchHHHHHHHHHHHHHHHH
Confidence            58999999 99999999999999999999999999999999999999999999 754211 0112223345566788889


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++++++||+.++|+|
T Consensus       100 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~e  179 (264)
T 1wz8_A          100 PLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEE  179 (264)
T ss_dssp             HHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHH
T ss_pred             HHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       180 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  202 (264)
T 1wz8_A          180 AERLGLVALAVEDEKVYEKALEV---------------------------------------------------------  202 (264)
T ss_dssp             HHHHTSSSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCceeecChhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999988876544433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|+..||.+++.+|++++..... ++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       203 ----------a~~la~~~~~a~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  260 (264)
T 1wz8_A          203 ----------AERLAQGPKEALHHTKHALNHWYRS-FLPHFELSLALEFLGFS---GKELEEGLKALKEKRP  260 (264)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHGGG---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhc---ChHHHHHHHHHHccCC
Confidence                      7899999999999999999988888 99999999999999888   9999999999999986

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=100.00  E-value=2.9e-57  Score=401.66  Aligned_cols=236  Identities=22%  Similarity=0.302  Sum_probs=212.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.........    .++.. +.++..
T Consensus        19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~----~~~~~-~~~~~~   93 (265)
T 3qxz_A           19 VLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRN----PDFSA-SPVQPA   93 (265)
T ss_dssp             EEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCS----SCCCS-CCSSSC
T ss_pred             EEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHH----HHHHH-HHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987543211111    11112 456677


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+|
T Consensus        94 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~e  173 (265)
T 3qxz_A           94 AFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQR  173 (265)
T ss_dssp             GGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred             HHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       174 A~~~GLv~~vv~~~~l~~~a~-----------------------------------------------------------  194 (265)
T 3qxz_A          174 AVETGLANRCLPAGKVLGAAL-----------------------------------------------------------  194 (265)
T ss_dssp             HHHHTSCSEEECHHHHHHHHH-----------------------------------------------------------
T ss_pred             HHHCCCccEeeCHHHHHHHHH-----------------------------------------------------------
Confidence            999999999999877764443                                                           


Q ss_pred             CCCchHHHHHHHHHHhc-CchHHHHHHHHHHhhhcCCHHHH--HHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEA-SPLSLKVSLRSIREGRFQTFDEC--LVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~-~p~a~~~~k~~l~~~~~~~l~~~--l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +++++|+.. ||.+++.+|++++.....+++++  ++.|...+..++.   |+|++||+++|++||+
T Consensus       195 --------~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~---s~d~~egi~Af~ekr~  258 (265)
T 3qxz_A          195 --------RMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETADHLRLMG---SQDAAEGPRAFIDGRP  258 (265)
T ss_dssp             --------HHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHT---STHHHHHHHHHHHTSC
T ss_pred             --------HHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC---ChHHHHHHHHHHcCCC
Confidence                    348999999 99999999999999888888899  9999999999998   9999999999999986

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=100.00  E-value=2.9e-56  Score=393.16  Aligned_cols=231  Identities=20%  Similarity=0.260  Sum_probs=209.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.....  ... ...+     . +..
T Consensus        19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~--~~~-~~~~-----~-~~~   89 (256)
T 3trr_A           19 LITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEA--VLS-ERGL-----G-FTN   89 (256)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCC--CEE-TTEE-----T-TSS
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccc--hhh-hhhh-----h-HHH
Confidence            589999999999999999999999999999999999999999999999999998864311  110 0011     1 123


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      + ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.++++||+.|+|+|
T Consensus        90 ~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~e  168 (256)
T 3trr_A           90 V-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAED  168 (256)
T ss_dssp             S-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHH
T ss_pred             h-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHH
Confidence            4 89999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       169 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  190 (256)
T 3trr_A          169 AAKYGFINRLVDDGQALDTALE----------------------------------------------------------  190 (256)
T ss_dssp             HGGGTCCSEEECTTCHHHHHHH----------------------------------------------------------
T ss_pred             HHHCCCeeEecChHHHHHHHHH----------------------------------------------------------
Confidence            9999999999999998755443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|++||+
T Consensus       191 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  250 (256)
T 3trr_A          191 ---------LAAKITANGPLAVAATKRIIIESASWAPEEAFAKQGEILMPIFV---SEDAKEGAKAFAEKRA  250 (256)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence                     38999999999999999999999999999999999999999998   9999999999999986

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.1e-57  Score=397.89  Aligned_cols=233  Identities=21%  Similarity=0.217  Sum_probs=180.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++|+|||||.|+.||+|+|++++.........    .+...+++++..
T Consensus        24 ~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~----~~~~~~~~~~~~   99 (258)
T 3lao_A           24 LIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGF----RYPDGGVDPWGV   99 (258)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBC----CCCTTCCCTTSC
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhH----HHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999998653221110    111222344566


Q ss_pred             H-hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 L-GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l-~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      + .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++++++||++|+|+
T Consensus       100 l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~  179 (258)
T 3lao_A          100 VQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDAD  179 (258)
T ss_dssp             SSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEHH
T ss_pred             HHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH
Confidence            7 899999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       180 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  202 (258)
T 3lao_A          180 EALRMRLLTEVVEPGEELARALE---------------------------------------------------------  202 (258)
T ss_dssp             HHHHTTSCSEEECTTCHHHHHHH---------------------------------------------------------
T ss_pred             HHHHcCCCcEeeChhHHHHHHHH---------------------------------------------------------
Confidence            99999999999999988755443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI  307 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l  307 (312)
                                ++++|++.||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|+
T Consensus       203 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~eg~~AF~  258 (258)
T 3lao_A          203 ----------YAERIARAAPLAVRAALQSAFQGRDEGDDAALSRVNESLAALIG---SEDVREGVLAMV  258 (258)
T ss_dssp             ----------HHHHHHHSCHHHHHHHHHHHHHHTC----------------------------------
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHhhC
Confidence                      38999999999999999999999888999999999999999888   999999999996

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=100.00  E-value=6.5e-56  Score=394.28  Aligned_cols=234  Identities=21%  Similarity=0.312  Sum_probs=207.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ +|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....  .+......+....+.++..
T Consensus        26 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~  102 (272)
T 3qk8_A           26 NLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETI--GDYEGRIRIMREARDLVLN  102 (272)
T ss_dssp             EEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHH--HCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccc--cchHHHHHHHHHHHHHHHH
Confidence            58999999 99999999999999999999999999999999999999999999986532  1233334556667788999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+|
T Consensus       103 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~e  182 (272)
T 3qk8_A          103 LVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEE  182 (272)
T ss_dssp             HHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       183 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  204 (272)
T 3qk8_A          183 AERIGLVSTCVDDDEVLPTATR----------------------------------------------------------  204 (272)
T ss_dssp             HHHHTSSSEEECGGGHHHHHHH----------------------------------------------------------
T ss_pred             HHHCCCCcEeeCHhHHHHHHHH----------------------------------------------------------
Confidence            9999999999999887754443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF---QTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               ++++|+..||.+++.+|++++....   ..+++.++.|    ..++.   |+|++||+++|++||+
T Consensus       205 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~---s~d~~eg~~Af~ekR~  263 (272)
T 3qk8_A          205 ---------LAENLAQGAQNAIRWTKRSLNHWYRMFGPTFETSLGLE----FLGFT---GPDVQEGLAAHRQKRP  263 (272)
T ss_dssp             ---------HHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----HHHTT---SSHHHHHHHHHHTTSC
T ss_pred             ---------HHHHHHcCCHHHHHHHHHHHHHHHhhcchhHHHHHHHH----HHHhC---CHHHHHHHHHHHcCCC
Confidence                     3899999999999999999986644   3455555554    35566   9999999999999986

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=100.00  E-value=3.2e-56  Score=395.28  Aligned_cols=236  Identities=23%  Similarity=0.307  Sum_probs=208.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........... ..+   ....+ 
T Consensus        21 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~-~~~---~~~~~-   95 (267)
T 3r9t_A           21 VITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDH-PEW---GFAGY-   95 (267)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTC-GGG---CGGGT-
T ss_pred             EEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHH-HhH---HHHHH-
Confidence            5899999999999999999999999999999999999999999 69999999999864321111100 000   00111 


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      ...++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||+.|+|+
T Consensus        96 ~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~i~A~  175 (267)
T 3r9t_A           96 VRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAA  175 (267)
T ss_dssp             TTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHH
Confidence            23389999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       176 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  198 (267)
T 3r9t_A          176 AARDWGLINEVVEAGSVLDAALA---------------------------------------------------------  198 (267)
T ss_dssp             HHHHHTSSSEEECTTCHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCccEEcChhHHHHHHHH---------------------------------------------------------
Confidence            99999999999999998755443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHH---HHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRS---IREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~---l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                ++++|++.||.+++.+|++   ++.....+++++++.|...+..++.   |+|++||+++|++||+
T Consensus       199 ----------~a~~la~~~p~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekR~  261 (267)
T 3r9t_A          199 ----------LASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLK---SEDAKEGPRAFAEKRE  261 (267)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTT---SSHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHHhCChHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHcCCC
Confidence                      3899999999999999999   8888888999999999999999988   9999999999999986

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=100.00  E-value=2.2e-55  Score=388.76  Aligned_cols=236  Identities=14%  Similarity=0.148  Sum_probs=209.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-CCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||. |++||+|+|++++..    .+.+....+...++.++.
T Consensus        17 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~   91 (260)
T 1sg4_A           17 VMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG----RSPAHYAGYWKAVQELWL   91 (260)
T ss_dssp             EEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSS----CCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhc----cCHHHHHHHHHHHHHHHH
Confidence            58999997 699999999999999999999999999999999 699999999998742    123334455566778888


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEe--CceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~--~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+  ++++|++||+++|++|++|++++|++++|.. +.++++||+.|+
T Consensus        92 ~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~  171 (260)
T 1sg4_A           92 RLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFP  171 (260)
T ss_dssp             HHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBC
T ss_pred             HHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHHHcCCcCC
Confidence            9999999999999999999999999999999999  8999999999999999999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+|+|++++.+.+.+                                                       
T Consensus       172 a~eA~~~GLv~~vv~~~~l~~~a~~-------------------------------------------------------  196 (260)
T 1sg4_A          172 PAEALQVGIVDQVVPEEQVQSTALS-------------------------------------------------------  196 (260)
T ss_dssp             HHHHHHHTSSSEEECGGGHHHHHHH-------------------------------------------------------
T ss_pred             HHHHHHcCCCCEecCHHHHHHHHHH-------------------------------------------------------
Confidence            9999999999999998887654443                                                       


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  .+++|+..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|+++|+
T Consensus       197 ------------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~af~ekr~  256 (260)
T 1sg4_A          197 ------------AIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFIS---KDSIQKSLQMYLERLK  256 (260)
T ss_dssp             ------------HHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHT---SHHHHHHHTC------
T ss_pred             ------------HHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHhhc
Confidence                        37899999999999999999988877889999999999999988   9999999999999985

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=5.8e-56  Score=393.19  Aligned_cols=231  Identities=21%  Similarity=0.282  Sum_probs=203.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHH-HH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF-IY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......  ....       +.+ +.
T Consensus        27 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~~-------~~~~~~   97 (265)
T 3qxi_A           27 IITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENV--VVEG-------RGLGFT   97 (265)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCC--EETT-------TEETTT
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchh--hhhh-------hhhhHH
Confidence            5899999999999999999999999999999999999999999999999999987643211  0000       011 22


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+.|+|+
T Consensus        98 ~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~  176 (265)
T 3qxi_A           98 ERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAE  176 (265)
T ss_dssp             TSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCCEEHH
T ss_pred             HhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHHcCCCcCHH
Confidence            3334 999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       177 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  199 (265)
T 3qxi_A          177 RAHALGMVNVLAEPGAALDAAIA---------------------------------------------------------  199 (265)
T ss_dssp             HHHHTTSCSEEECTTCHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCccEeeChhHHHHHHHH---------------------------------------------------------
Confidence            99999999999999998755443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                ++++|++.||.+++.+|++++.....+++++++.|...+..++.   ++|++||+++|++||+
T Consensus       200 ----------~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~eg~~af~ekr~  259 (265)
T 3qxi_A          200 ----------LAEKITANGPLAVAATKRIITESRGWSLDTRFAQQMKILFPIFT---SNDAKEGAIAFAEKRP  259 (265)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHHHH---CHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                      38999999999999999999999989999999999999999998   9999999999999986

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=100.00  E-value=5.6e-56  Score=390.98  Aligned_cols=231  Identities=21%  Similarity=0.254  Sum_probs=192.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...             ..+..+...
T Consensus        21 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~-------------~~~~~~~~~   87 (256)
T 3pe8_A           21 TLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT-------------TELPDISPK   87 (256)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC----------------------CCC
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh-------------HHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532             111233466


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||++|+|+|
T Consensus        88 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~e  167 (256)
T 3pe8_A           88 WPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQD  167 (256)
T ss_dssp             CCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHHHHHcCCCCCHHH
Confidence            7899999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       168 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  190 (256)
T 3pe8_A          168 ALRAGLVTEVVAHDDLLTAARRV---------------------------------------------------------  190 (256)
T ss_dssp             HHHHTSCSCEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCCeEEeCHhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887555443                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++|++.||.+++.+|++++.....+++++++.|.+.+...+....++|++|++.+|++||+
T Consensus       191 ----------a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k  252 (256)
T 3pe8_A          191 ----------AASIVGNNQKAVRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGR  252 (256)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccC
Confidence                      89999999999999999999998889999999999998766544458999999999999986

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=100.00  E-value=2.4e-56  Score=399.39  Aligned_cols=237  Identities=16%  Similarity=0.178  Sum_probs=208.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCC-hHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK-LEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~-~~~~~~~~~~~~~~~   78 (312)
                      +||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........ ......+...++.++
T Consensus        21 ~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (287)
T 3gkb_A           21 RIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVG   99 (287)
T ss_dssp             EEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHH
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhHHHHHHHHHHHHHH
Confidence            58999998 7999999999999999999999999999999998 89999999998753210000 000011223356778


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeC-ceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.. +++|++||++|+
T Consensus       100 ~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~  179 (287)
T 3gkb_A          100 ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFD  179 (287)
T ss_dssp             HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred             HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCC
Confidence            889999999999999999999999999999999999 999999999999999999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |+||+++||||+|+|++++.+.+.+                                                       
T Consensus       180 A~eA~~~GLV~~vv~~~~l~~~a~~-------------------------------------------------------  204 (287)
T 3gkb_A          180 AETAASYGWINRALPADELDEYVDR-------------------------------------------------------  204 (287)
T ss_dssp             HHHHHHHTSSSEEECHHHHHHHHHH-------------------------------------------------------
T ss_pred             HHHHHHCCCCcEEeChhHHHHHHHH-------------------------------------------------------
Confidence            9999999999999998777654443                                                       


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                  ++++|++.||.+++.+|++++..   .+.++++.|...+..++.   |+|++||+++|++||+
T Consensus       205 ------------lA~~la~~~p~a~~~~K~~l~~~---~~~~~l~~e~~~~~~~~~---s~d~~eg~~AF~ekr~  261 (287)
T 3gkb_A          205 ------------VARNIAALPDGVIEAAKRSLPAD---DLKEGLLGENDAWAATFS---LPAAQQLISGGLKDGA  261 (287)
T ss_dssp             ------------HHHHHHTSCTTHHHHHHHHSCCC---CCHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHTTT
T ss_pred             ------------HHHHHHcCCHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhcCC
Confidence                        38999999999999999999874   356999999999999998   9999999999999986

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=100.00  E-value=3e-55  Score=388.65  Aligned_cols=234  Identities=16%  Similarity=0.220  Sum_probs=204.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.| ++|+|||||.|++||+|+|++++........  ....+...++.++..
T Consensus        19 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~--~~~~~~~~~~~~~~~   95 (267)
T 3hp0_A           19 YITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGR--KQASSQEPLYDLWMK   95 (267)
T ss_dssp             EEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTC--CSCCCCHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChH--HHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999986 5999999999999999999999865321111  111223445677888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|.. +.+|++||+.|+|+|
T Consensus        96 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~A~ellltg~~i~A~e  174 (267)
T 3hp0_A           96 LQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQKAHYMTLMTKPISVQE  174 (267)
T ss_dssp             HHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHHHHHHHHHCCCBCHHH
T ss_pred             HHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999885 67899999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|+.+.  .+.                                                           
T Consensus       175 A~~~GLV~~vv~~~~~--~~~-----------------------------------------------------------  193 (267)
T 3hp0_A          175 ASEWGLIDAFDAESDV--LLR-----------------------------------------------------------  193 (267)
T ss_dssp             HHHHTSSSCBCSCTTH--HHH-----------------------------------------------------------
T ss_pred             HHHCCCcceecCCHHH--HHH-----------------------------------------------------------
Confidence            9999999999986442  122                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|++++... ..+++.++.|.+.+..++.   |+|++||+++|++||+
T Consensus       194 --------~~a~~la~~~p~a~~~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~---s~d~~Eg~~AF~ekr~  253 (267)
T 3hp0_A          194 --------KHLLRLRRLNKKGIAHYKQFMSSLD-HQVSRAKATALTANQDMFS---DPQNQMGIIRYVETGQ  253 (267)
T ss_dssp             --------HHHHHHTTSCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTT---STTHHHHHHHHTTSCC
T ss_pred             --------HHHHHHHhCCHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhcCC
Confidence                    2378999999999999999999864 4578888899999888887   9999999999999986

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=100.00  E-value=3.9e-55  Score=391.90  Aligned_cols=238  Identities=17%  Similarity=0.224  Sum_probs=201.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.....  ..+....+......++.
T Consensus        40 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~--~~~~~~~~~~~~~~~~~  117 (289)
T 3t89_A           40 KITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGG--YKDDSGVHHLNVLDFQR  117 (289)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC------------------CTHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhcccc--chhhhHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999 59999999998753211  01111112223456788


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|++||+.|+|+
T Consensus       118 ~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~A~~llltG~~i~A~  197 (289)
T 3t89_A          118 QIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAK  197 (289)
T ss_dssp             HHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHHHHHHHHcCCcccHH
Confidence            89999999999999999999999999999999999999999999999888888899999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       198 eA~~~GLV~~vv~~~~l~~~a~~~--------------------------------------------------------  221 (289)
T 3t89_A          198 QALDMGLVNTVVPLADLEKETVRW--------------------------------------------------------  221 (289)
T ss_dssp             HHHHHTSSSEEECGGGHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCceEeeCHHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999998887555433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|+..||.+++.+|++++.... ...+..+.|.+.+..++.   |+|++||+++|++||+
T Consensus       222 -----------A~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---s~d~~Eg~~AF~ekR~  279 (289)
T 3t89_A          222 -----------CREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYM---TEEGQEGRNAFNQKRQ  279 (289)
T ss_dssp             -----------HHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTT---SSTTTHHHHHHHTTSC
T ss_pred             -----------HHHHHcCCHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHhc---CHHHHHHHHHHhcCCC
Confidence                       899999999999999999998754 234444567777777777   9999999999999986

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=100.00  E-value=2.1e-55  Score=399.88  Aligned_cols=240  Identities=16%  Similarity=0.197  Sum_probs=178.7

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCC-------ceeccCCchhHHHhhc---cCC----hHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-------AFCAGGDIVSLYHFMN---QGK----LEE   66 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~-------~F~aG~Dl~~~~~~~~---~~~----~~~   66 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|++||+|||||.|+       +||+|+|++++.....   ...    .+.
T Consensus        69 ~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~  148 (334)
T 3t8b_A           69 RVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDV  148 (334)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-----------------
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccchhhhH
Confidence            58999999999999999999999999999999999999999995       8999999997642110   000    011


Q ss_pred             HHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-
Q 021410           67 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-  144 (312)
Q Consensus        67 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-  144 (312)
                      ...+...+..++..+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++|.. 
T Consensus       149 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG~~~  228 (334)
T 3t8b_A          149 ARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKF  228 (334)
T ss_dssp             -----CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHhhHHH
Confidence            11112234567788999999999999999999999999999999999 9999999999999999999999999999999 


Q ss_pred             HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC
Q 021410          145 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL  224 (312)
Q Consensus       145 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (312)
                      +++|++||+.|+|+||+++||||+|||++++.+.+.++                                          
T Consensus       229 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~------------------------------------------  266 (334)
T 3t8b_A          229 AREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQW------------------------------------------  266 (334)
T ss_dssp             HHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHH------------------------------------------
T ss_pred             HHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHH------------------------------------------
Confidence            99999999999999999999999999998887555443                                          


Q ss_pred             CCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 021410          225 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN  304 (312)
Q Consensus       225 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~  304 (312)
                                               +++|+..||.+++.+|++++.... .+.+.+..|.+.+..++.   |+|++||++
T Consensus       267 -------------------------A~~ia~~~p~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~---s~d~~Eg~~  317 (334)
T 3t8b_A          267 -------------------------AAEINAKSPQAQRMLKFAFNLLDD-GLVGQQLFAGEATRLAYM---TDEAVEGRD  317 (334)
T ss_dssp             -------------------------HHHHHTSCHHHHHHHHHHHHHTCC-CC----------------------------
T ss_pred             -------------------------HHHHHhCCHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence                                     899999999999999999998754 455556667777767776   999999999


Q ss_pred             eeeccCC
Q 021410          305 FQILNKH  311 (312)
Q Consensus       305 a~l~~r~  311 (312)
                      ||++||+
T Consensus       318 AFleKR~  324 (334)
T 3t8b_A          318 AFLQKRP  324 (334)
T ss_dssp             -------
T ss_pred             HHHcCCC
Confidence            9999985

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=100.00  E-value=3.1e-55  Score=390.30  Aligned_cols=237  Identities=17%  Similarity=0.192  Sum_probs=201.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEe-----CC-CceeccCCchhHHHhhccCChHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-----SG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL   74 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g-----~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~   74 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||     .| ++||+|+|++++....   ............
T Consensus        22 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~   98 (275)
T 4eml_A           22 KIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGG---YIDDQGTPRLNV   98 (275)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-----------------CCCH
T ss_pred             EEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhccc---ccchhhHHHHHH
Confidence            58999999999999999999999999999999999999999     88 5999999999875311   000000111124


Q ss_pred             HHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCC
Q 021410           75 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA  153 (312)
Q Consensus        75 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~  153 (312)
                      +.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.+|++||+
T Consensus        99 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~~~A~~llltg~  178 (275)
T 4eml_A           99 LDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCR  178 (275)
T ss_dssp             HHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHHHHHHHHHHhCC
Confidence            5677888999999999999999999999999999999999999999999999999888899999999999 999999999


Q ss_pred             CCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHH
Q 021410          154 KLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDS  233 (312)
Q Consensus       154 ~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (312)
                      .|+|+||+++||||+|+|++++.+.+.++                                                   
T Consensus       179 ~i~A~eA~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------  207 (275)
T 4eml_A          179 QYSAQEAERMGMVNTVVPVDRLEEEGIQW---------------------------------------------------  207 (275)
T ss_dssp             CEEHHHHHHHTSCSEEECGGGHHHHHHHH---------------------------------------------------
T ss_pred             CcCHHHHHHcCCccEeeCHHHHHHHHHHH---------------------------------------------------
Confidence            99999999999999999998887554433                                                   


Q ss_pred             HHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          234 LESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       234 l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                      +++|++.||.+++.+|++++.... ...+..+.|.+.+..++.   |+|++||+++|++||+
T Consensus       208 ----------------a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~~~~~~~~~~~---s~d~~eg~~AF~ekR~  265 (275)
T 4eml_A          208 ----------------AKEILSKSPLAIRCLKAAFNADCD-GQAGLQELAGNATLLYYM---TEEGSEGKQAFLEKRP  265 (275)
T ss_dssp             ----------------HHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ----------------HHHHHhCCHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHhc---CHHHHHHHHHHHcCCC
Confidence                            899999999999999999997753 234445567777777777   9999999999999986

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=100.00  E-value=1.2e-55  Score=390.89  Aligned_cols=235  Identities=19%  Similarity=0.210  Sum_probs=209.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEe-CC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g-~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+ +|+||||| .| ++||+|+|++++..... ...    .+...++.++
T Consensus        16 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~-~~~----~~~~~~~~~~   89 (261)
T 1ef8_A           16 VIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGR-DPL----SYDDPLRQIT   89 (261)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC------CTT----CTTSHHHHHH
T ss_pred             EEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCc-hhH----HHHHHHHHHH
Confidence            58999999999999999999999999999999 99999999 99 99999999998754211 111    1122346677


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.++|
T Consensus        90 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a  169 (261)
T 1ef8_A           90 RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITA  169 (261)
T ss_dssp             HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEH
T ss_pred             HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCH
Confidence            889999999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++||||+|+|++++.+.+.+                                                        
T Consensus       170 ~eA~~~GLv~~vv~~~~l~~~a~~--------------------------------------------------------  193 (261)
T 1ef8_A          170 QRALAVGILNHVVEVEELEDFTLQ--------------------------------------------------------  193 (261)
T ss_dssp             HHHHHTTSCSEEECHHHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHHCCCcccccCHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999997776544433                                                        


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHH--HhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSL--QGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~--~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 .+++|+..||.+++.+|++++.....+++++++.|.+.+.  .++.   ++|++||+++|++||+
T Consensus       194 -----------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---s~d~~eg~~af~ekr~  255 (261)
T 1ef8_A          194 -----------MAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYD---SEDYQEGMNAFLEKRK  255 (261)
T ss_dssp             -----------HHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             -----------HHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhc---CHHHHHHHHHHHccCC
Confidence                       3789999999999999999999888889999999999998  8887   9999999999999885

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=100.00  E-value=3.8e-55  Score=389.70  Aligned_cols=236  Identities=19%  Similarity=0.237  Sum_probs=204.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCC-ceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+ +||+|+|++++.... ........  ...++.++.
T Consensus        25 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~-~~~~~~~~--~~~~~~~~~  101 (273)
T 2uzf_A           25 KVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGG-YVGEDQIP--RLNVLDLQR  101 (273)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC---------CCSSSC--CCTHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccc-cchhhhHH--HhhHHHHHH
Confidence            58999999999999999999999999999999999999999998 999999999875311 00000000  001345667


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||+.|+|+
T Consensus       102 ~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~  181 (273)
T 2uzf_A          102 LIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQ  181 (273)
T ss_dssp             HHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHHTCCCEEHH
T ss_pred             HHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHHhCCCCCHH
Confidence            78899999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       182 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  205 (273)
T 2uzf_A          182 EALDMGLVNTVVPLEKVEDETVQW--------------------------------------------------------  205 (273)
T ss_dssp             HHHHHTSSSEEECGGGSHHHHHHH--------------------------------------------------------
T ss_pred             HHHHcCCCccccCHHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999988876544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHH-HHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREY-RMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~-~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|++.||.+++.+|++++  ...+++++++.|. +.+..++.   ++|++||+++|++||+
T Consensus       206 -----------a~~la~~~~~a~~~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~---s~d~~egi~af~ekr~  263 (273)
T 2uzf_A          206 -----------CKEIMKHSPTALRFLKAAMN--ADTDGLAGLQQMAGDATLLYYT---TDEAKEGRDAFKEKRD  263 (273)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHHH--HHHSHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             -----------HHHHHhCCHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHhcCC
Confidence                       78899999999999999998  3457899999998 88888887   9999999999999885

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=100.00  E-value=6.4e-55  Score=381.93  Aligned_cols=228  Identities=18%  Similarity=0.239  Sum_probs=206.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++..... ...        ..++++..
T Consensus        15 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~--------~~~~~~~~   85 (243)
T 2q35_A           15 QITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTR-GEV--------EVLDLSGL   85 (243)
T ss_dssp             EEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHT-TCC--------CCCCCHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccc-hhh--------HHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998764321 111        12356677


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+|
T Consensus        86 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e  165 (243)
T 2q35_A           86 ILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKE  165 (243)
T ss_dssp             HHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            8899999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.+                                                          
T Consensus       166 A~~~GLv~~vv~~~~l~~~a~~----------------------------------------------------------  187 (243)
T 2q35_A          166 LAERGIPFPVVSRQDVLNYAQQ----------------------------------------------------------  187 (243)
T ss_dssp             HHHTTCSSCEECHHHHHHHHHH----------------------------------------------------------
T ss_pred             HHHcCCCCEecChhHHHHHHHH----------------------------------------------------------
Confidence            9999999999998777644433                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI  307 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l  307 (312)
                               .+++++..||.+++.+|++++.....+++++++.|.+.+..++.   ++|++||+++|+
T Consensus       188 ---------~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~---s~d~~eg~~a~~  243 (243)
T 2q35_A          188 ---------LGQKIAKSPRLSLVALKQHLSADIKAKFPEAIKKELEIHQVTFN---QPEIASRIQQEF  243 (243)
T ss_dssp             ---------HHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---STTHHHHHHTTC
T ss_pred             ---------HHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhC---CHHHHHHHhhcC
Confidence                     37899999999999999999988877899999999999988887   999999999875

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=100.00  E-value=2.2e-54  Score=387.03  Aligned_cols=232  Identities=17%  Similarity=0.138  Sum_probs=208.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCc-eeccCCchhHHHhhccCChHHHH---HHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQGKLEECK---DFFRTLYS   76 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~-F~aG~Dl~~~~~~~~~~~~~~~~---~~~~~~~~   76 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|+. ||+|+|++++....    .....   .+...++.
T Consensus        20 ~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~----~~~~~~~~~~~~~~~~   94 (289)
T 3h0u_A           20 SATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYT----AEAAKAGGPGDASLGM   94 (289)
T ss_dssp             EEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHH----HHHHTTSSTTCCSHHH
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcC----cchhhhHHHHHHHHHH
Confidence            58999998 799999999999999999999999999999999955 55667999886431    11110   22344567


Q ss_pred             HHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCC
Q 021410           77 FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAK  154 (312)
Q Consensus        77 ~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~  154 (312)
                      ++..+.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|.. +++|++||++
T Consensus        95 ~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~  174 (289)
T 3h0u_A           95 LFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSD  174 (289)
T ss_dssp             HHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred             HHHHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCC
Confidence            888899999999999999999999999999999999998 99999999999999999999999999999 9999999999


Q ss_pred             CCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHH
Q 021410          155 LNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSL  234 (312)
Q Consensus       155 i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  234 (312)
                      |+|+||+++||||+|+|++++.+.+.+                                                     
T Consensus       175 i~A~eA~~~GLV~~vv~~~~l~~~a~~-----------------------------------------------------  201 (289)
T 3h0u_A          175 FDADLAERYGWVNRAVPDAELDEFVAG-----------------------------------------------------  201 (289)
T ss_dssp             EEHHHHHHHTSSSEEECHHHHHHHHHH-----------------------------------------------------
T ss_pred             CCHHHHHHCCCccEecCHHHHHHHHHH-----------------------------------------------------
Confidence            999999999999999998877654443                                                     


Q ss_pred             HcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeec
Q 021410          235 ESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQIL  308 (312)
Q Consensus       235 ~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~  308 (312)
                                    ++++|++.||.+++.+|++++.... +++++++.|.+.+..++.   ++|++||+++|++
T Consensus       202 --------------lA~~la~~~p~a~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~---s~d~~egi~AFle  257 (289)
T 3h0u_A          202 --------------IAARMSGFPRDALIAAKSAINAISL-PAPAEVRADAALFQQLVR---GEKVQQRTAELFK  257 (289)
T ss_dssp             --------------HHHHHHTSCHHHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTT---SHHHHHHHHHHHH
T ss_pred             --------------HHHHHHhCCHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhC
Confidence                          3899999999999999999999887 899999999999999988   9999999999997

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=100.00  E-value=3.5e-53  Score=376.87  Aligned_cols=220  Identities=21%  Similarity=0.280  Sum_probs=204.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++ |++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...    .......+...++.++..
T Consensus        36 ~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~  110 (277)
T 4di1_A           36 TLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTL----NAPEADTAARVRLEAIDA  110 (277)
T ss_dssp             EEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTC----CHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCccccccc----ChHHHHHHHHHHHHHHHH
Confidence            589999999 999999999999999999999999999999999999999999988642    234455566777888999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +.++++||+.|+|+|
T Consensus       111 l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~e  190 (277)
T 4di1_A          111 VAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEE  190 (277)
T ss_dssp             HHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       191 A~~~GLV~~vv~~~~l~~~a~~~---------------------------------------------------------  213 (277)
T 4di1_A          191 ALALGLIDDMVAPDDVYDSAVAW---------------------------------------------------------  213 (277)
T ss_dssp             HHHHTSCSEEECGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCccEEeChhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998877554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS  292 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~  292 (312)
                                +++|++.||.+++.+|++++.....+++++++.|...+..++.
T Consensus       214 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  256 (277)
T 4di1_A          214 ----------ARRYLECPPRALAAAKAVINDVFELEATERAAAERRRYVELFA  256 (277)
T ss_dssp             ----------HHTTTTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTS
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc
Confidence                      7899999999999999999999999999999999999998886

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-54  Score=383.60  Aligned_cols=225  Identities=21%  Similarity=0.311  Sum_probs=198.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|++...      ..   ..+...++.++..
T Consensus        33 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~---~~~~~~~~~~~~~  102 (264)
T 3he2_A           33 TIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FA---ADYPDRLIELHKA  102 (264)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TG---GGHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hh---HHHHHHHHHHHHH
Confidence            5899999999999999999999999999988 999999999999999999998311      11   1234456678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|++||++|+|+|
T Consensus       103 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~e  182 (264)
T 3he2_A          103 MDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEI  182 (264)
T ss_dssp             HHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCccHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|++   +. .+.                                                           
T Consensus       183 A~~~GLV~~v~~---~~-~a~-----------------------------------------------------------  199 (264)
T 3he2_A          183 ALHTGMANRIGT---LA-DAQ-----------------------------------------------------------  199 (264)
T ss_dssp             HHHHTSCSEECC---HH-HHH-----------------------------------------------------------
T ss_pred             HHHCCCeEEEec---HH-HHH-----------------------------------------------------------
Confidence            999999999985   22 122                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|++++..  .++++.++.|.+.+..++.   |+|++||+++|++||+
T Consensus       200 --------~~A~~la~~~p~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~---s~d~~Eg~~AF~ekR~  258 (264)
T 3he2_A          200 --------AWAAEIARLAPLAIQHAKRVLNDD--GAIEEAWPAHKELFDKAWG---SQDVIEAQVARMEKRP  258 (264)
T ss_dssp             --------HHHHHHHTSCHHHHHHHHHHHHTS--SCSCCCCHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             --------HHHHHHHcCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhcCCC
Confidence                    237899999999999999999976  3466778888888888888   9999999999999986

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=100.00  E-value=3.3e-53  Score=373.43  Aligned_cols=226  Identities=14%  Similarity=0.152  Sum_probs=198.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++. +++|+|||||.|++||+|+|++++...    ........+..++.++..
T Consensus        19 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~   93 (254)
T 3isa_A           19 TFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQ----SEGDLLLRMVRIEMLLQR   93 (254)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTS----CHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhcc----CchhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999987 589999999999999999999987532    222333344556788899


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|   ++++|++++|.. +.++++||+.|+|+|
T Consensus        94 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ltg~~~~a~e  170 (254)
T 3isa_A           94 VAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSILGSARAFDADE  170 (254)
T ss_dssp             HHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHHTTTCEEEHHH
T ss_pred             HHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHHHhCCCCcHHH
Confidence            9999999999999999999999999999999999999999999999998   378999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       171 A~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------------------  193 (254)
T 3isa_A          171 ARRIGFVRDCAAQAQWPALIDAA---------------------------------------------------------  193 (254)
T ss_dssp             HHHTTSSSEECCGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHCCCccEEeChhHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887555443                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                ++++++.||.+++.+|++++.       +.++.|...+...+.   ++|++||+++|++||+
T Consensus       194 ----------a~~la~~~~~a~~~~K~~l~~-------~~~~~e~~~~~~~~~---s~d~~egi~af~ekr~  245 (254)
T 3isa_A          194 ----------AEAATALDPATRATLHRVLRD-------DHDDADLAALARSAA---QPGFKARIRDYLAQPA  245 (254)
T ss_dssp             ----------HHHHTTSCHHHHHHHHHHHSC-------CCHHHHHHHHHHHHH---STTHHHHHHHHHHC--
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHhh-------hhHHHHHHHHHHHhC---CHHHHHHHHHHHhcCC
Confidence                      789999999999999999842       234567777888888   9999999999999986

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=100.00  E-value=1.6e-52  Score=374.23  Aligned_cols=242  Identities=16%  Similarity=0.110  Sum_probs=199.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC---ChHHH----HHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---KLEEC----KDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~~~~~----~~~~~~   73 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......   .....    ..++..
T Consensus        21 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (280)
T 1pjh_A           21 IIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVAR  100 (280)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHH
T ss_pred             EEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhhhHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999875321111   00111    122233


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEe-CceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhc
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT  151 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~-~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt  151 (312)
                      .+.++..+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|.. +.++++|
T Consensus       101 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~lllt  180 (280)
T 1pjh_A          101 NVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMF  180 (280)
T ss_dssp             HHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHh
Confidence            4577888999999999999999999999999999999999 9999999999999999999999999999998 9999999


Q ss_pred             CCCCCHHHHHHcCccceecCCC-----ChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCC
Q 021410          152 GAKLNGAEMMACGLATHYSVSE-----KLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  226 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (312)
                      |++|+|+||+++||||+|+|++     ++.+.+.                                              
T Consensus       181 g~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~----------------------------------------------  214 (280)
T 1pjh_A          181 NKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVL----------------------------------------------  214 (280)
T ss_dssp             TCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHH----------------------------------------------
T ss_pred             CCCCCHHHHHHCCCcceeeCCccccHHHHHHHHH----------------------------------------------
Confidence            9999999999999999999986     3332221                                              


Q ss_pred             HHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhhee
Q 021410          227 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQ  306 (312)
Q Consensus       227 ~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~  306 (312)
                                          .+++++|++.||.+++.+|++++......++.....|.+.....+.   +++..|+..+|
T Consensus       215 --------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~d~~e~~~af~---~kr~~e~~~~f  271 (280)
T 1pjh_A          215 --------------------EELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNESLKYWV---DGEPLKRFRQL  271 (280)
T ss_dssp             --------------------HHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH---HTHHHHHHTC-
T ss_pred             --------------------HHHHHHHHcCCHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHh---CCccHHHHHHH
Confidence                                1247899999999999999999987766677777777777766666   67777788888


Q ss_pred             eccCC
Q 021410          307 ILNKH  311 (312)
Q Consensus       307 l~~r~  311 (312)
                      +++|.
T Consensus       272 ~~~~~  276 (280)
T 1pjh_A          272 GSKQR  276 (280)
T ss_dssp             -----
T ss_pred             Hhccc
Confidence            87764

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=100.00  E-value=4.3e-52  Score=367.39  Aligned_cols=225  Identities=17%  Similarity=0.156  Sum_probs=198.9

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...   .+.+....+...+..++..
T Consensus        36 ~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~---~~~~~~~~~~~~~~~~~~~  112 (263)
T 2j5g_A           36 EVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDV---TNPREWDKTYWEGKKVLQN  112 (263)
T ss_dssp             EEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCT---TSHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhcc---CCHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987431   1222233444556678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEec-CCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-PETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~-pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|.. ++++++||+.|+|+
T Consensus       113 l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~A~  191 (263)
T 2j5g_A          113 LLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQ  191 (263)
T ss_dssp             HHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHH
T ss_pred             HHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHH
Confidence            99999999999999999 5999999999999999999999 999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       192 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  214 (263)
T 2j5g_A          192 QAYELNVVHEVLPQSKLMERAWE---------------------------------------------------------  214 (263)
T ss_dssp             HHHHTTSCSEEECGGGHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCccEecChHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                                .+++|++.||.+++.+|++++.....+++++++.|.              ..|||++|+.+|
T Consensus       215 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~--------------~~eg~~af~~~~  262 (263)
T 2j5g_A          215 ----------IARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYGL--------------ALEGITATDLRN  262 (263)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHTTC
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHH--------------HHhhHHHHHhcc
Confidence                      378999999999999999999887767777766553              359999999876

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=100.00  E-value=1.9e-51  Score=370.94  Aligned_cols=238  Identities=13%  Similarity=0.160  Sum_probs=208.6

Q ss_pred             CEEecCCCC----CCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHH
Q 021410            1 MAILNRPSA----LNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF   71 (312)
Q Consensus         1 ~itln~p~~----~Nal~~~~~~~L~~~l~~~~~-----d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~   71 (312)
                      +||||||+|    +|++|.+|+.+|.++++.++.     |+++|+|||+|.|++||+|+|++++.......+......+.
T Consensus        44 ~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~  123 (305)
T 3m6n_A           44 WIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYA  123 (305)
T ss_dssp             EEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTCHHHHHHHH
T ss_pred             EEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhccccccHHHHHHHH
Confidence            589999998    559999999999999999987     58999999999999999999999987543223334444455


Q ss_pred             HHHHHHHHHH---hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHH
Q 021410           72 RTLYSFIYLL---GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  147 (312)
Q Consensus        72 ~~~~~~~~~l---~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~  147 (312)
                      ..+...+..+   ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++
T Consensus       124 ~~~~~~~~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~  203 (305)
T 3m6n_A          124 QRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQK  203 (305)
T ss_dssp             HHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHHHHHH
Confidence            5555555444   468999999999999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCH
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV  227 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (312)
                      |++||+.|+|+||+++||||+|+|++++.+.+.++                                             
T Consensus       204 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~---------------------------------------------  238 (305)
T 3m6n_A          204 IMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQV---------------------------------------------  238 (305)
T ss_dssp             HHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHH---------------------------------------------
T ss_pred             HHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHH---------------------------------------------
Confidence            99999999999999999999999999987655443                                             


Q ss_pred             HHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheee
Q 021410          228 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQI  307 (312)
Q Consensus       228 ~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l  307 (312)
                                            +++|++ +|.+++.+|++++.....+++++++.|.+.+..++.   ++|....+.+++
T Consensus       239 ----------------------a~~la~-~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~~~~m~~l  292 (305)
T 3m6n_A          239 ----------------------IRESKR-TPHAWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQ---LGEKSLRTMDRL  292 (305)
T ss_dssp             ----------------------HHHHTT-CHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTT---CCHHHHHHHHHH
T ss_pred             ----------------------HHHHhh-ChHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHc---CchHHHHHHHHH
Confidence                                  788876 899999999999999999999999999999999998   999988877766


Q ss_pred             cc
Q 021410          308 LN  309 (312)
Q Consensus       308 ~~  309 (312)
                      ..
T Consensus       293 ~~  294 (305)
T 3m6n_A          293 VR  294 (305)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=100.00  E-value=1.3e-51  Score=358.73  Aligned_cols=214  Identities=21%  Similarity=0.179  Sum_probs=194.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.+++++++.| ++|+|||||.|++||+|+|++++...    +......+....++++..
T Consensus        17 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~~~~~~~   90 (233)
T 3r6h_A           17 VIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSG----EAKPAIDMLRGGFELSYR   90 (233)
T ss_dssp             EEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC-------CHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhcc----ChHHHHHHHHHHHHHHHH
Confidence            58999995 6999999999999999999987 59999999999999999999988642    234455667777889999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.. +.++++||++++|+|
T Consensus        91 l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~~l~ltg~~~~a~e  170 (233)
T 3r6h_A           91 LLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGET  170 (233)
T ss_dssp             HHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHHHHHHSCCEECHHH
T ss_pred             HHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.++                                                         
T Consensus       171 A~~~Glv~~vv~~~~l~~~a~~~---------------------------------------------------------  193 (233)
T 3r6h_A          171 ALAAGFIDEISLPEVVLSRAEEA---------------------------------------------------------  193 (233)
T ss_dssp             HHHHTSCSEECCGGGHHHHHHHH---------------------------------------------------------
T ss_pred             HHHcCCCcEeeCHHHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998887554433                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS  287 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~  287 (312)
                                +++|++.||.+++.+|++++.....+++++++.|.+.+
T Consensus       194 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~f  231 (233)
T 3r6h_A          194 ----------AREFAGLNQQAHNATKLRARAEALKAIRAGIDGIEAEF  231 (233)
T ss_dssp             ----------HHHHHTSCHHHHHHHHHHTTHHHHHHHHHHHHTSHHHH
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence                      89999999999999999999998889999999887765

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=100.00  E-value=5.2e-51  Score=354.74  Aligned_cols=212  Identities=16%  Similarity=0.154  Sum_probs=193.3

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|++|.+|+.+|.++++.++.|  +++|||||.|++||+|+|++++...     ......+....+.++..
T Consensus        18 ~itlnrp~-~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~-----~~~~~~~~~~~~~~~~~   89 (232)
T 3ot6_A           18 TLTLNNGK-VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSS-----AEAAINLVAQGSTLARR   89 (232)
T ss_dssp             EEEECCTT-TTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHC-----HHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCC-CCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhC-----hHHHHHHHHHHHHHHHH
Confidence            58999995 6999999999999999999987  4899999999999999999998642     33445666777889999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|+++++++++|.. +.++++||++|+|+
T Consensus        90 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l~ltg~~i~A~  169 (232)
T 3ot6_A           90 MLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPE  169 (232)
T ss_dssp             HHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHH
T ss_pred             HHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCCccCHH
Confidence            99999999999999999999999999999999998 89999999999998888889999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       170 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  193 (232)
T 3ot6_A          170 GAMAAGFLDKVVSVEELQGAALAV--------------------------------------------------------  193 (232)
T ss_dssp             HHHHHTSCSEEECTTTHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCCCEecCHHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999987655443                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMS  287 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~  287 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|.+.+
T Consensus       194 -----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~  231 (232)
T 3ot6_A          194 -----------AAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQHM  231 (232)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             -----------HHHHHcCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHhc
Confidence                       89999999999999999999998889999999998764

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=100.00  E-value=1.1e-50  Score=370.19  Aligned_cols=234  Identities=18%  Similarity=0.206  Sum_probs=188.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCC-----------------
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK-----------------   63 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~-----------------   63 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........                 
T Consensus        47 ~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (333)
T 3njd_A           47 RITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQAL  126 (333)
T ss_dssp             EEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHHH
T ss_pred             EEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999999999999999999998764321100                 


Q ss_pred             ---------hHHHHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchH
Q 021410           64 ---------LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS  134 (312)
Q Consensus        64 ---------~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~  134 (312)
                               ......+...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|  
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~pe~~lG~~P~~g--  204 (333)
T 3njd_A          127 NHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG--  204 (333)
T ss_dssp             TTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEECGGGGTTCCCTTC--
T ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeeechhhceeccCHHH--
Confidence                     001223455667778889999999999999999999999999999999999999999999999999876  


Q ss_pred             HHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhh
Q 021410          135 FYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH  213 (312)
Q Consensus       135 ~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (312)
                       ++++++|.. +.+|++||+.|+|+||+++||||+|||++++.+.+.++                               
T Consensus       205 -~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~l-------------------------------  252 (333)
T 3njd_A          205 -LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERL-------------------------------  252 (333)
T ss_dssp             -CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHH-------------------------------
T ss_pred             -HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHH-------------------------------
Confidence             478999999 99999999999999999999999999998887555443                               


Q ss_pred             HHHHHHhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcC-CHHHH--HH---------
Q 021410          214 RIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQ-TFDEC--LV---------  281 (312)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~-~l~~~--l~---------  281 (312)
                                                          +++|++.||.+++.+|++++..... ++...  +.         
T Consensus       253 ------------------------------------A~~ia~~~~~al~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~  296 (333)
T 3njd_A          253 ------------------------------------VERIAAMPVNQLIMAKLACNTALLNQGVATSQMVSTVFDGIARH  296 (333)
T ss_dssp             ------------------------------------HHHHHTSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTT
T ss_pred             ------------------------------------HHHHHcCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence                                                8999999999999999999988653 44443  21         


Q ss_pred             -HHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          282 -REYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       282 -~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                       .|...+.+..       ..+|+++|++||+
T Consensus       297 ~~e~~~f~~~~-------~~~g~~a~~ekR~  320 (333)
T 3njd_A          297 TPEGHAFVATA-------REHGFREAVRRRD  320 (333)
T ss_dssp             SHHHHHHHHHH-------HHHCHHHHHHHHH
T ss_pred             ChHHHHHHHHh-------hhHHHHHHHHhcC
Confidence             1222222222       2788888888774

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=100.00  E-value=8.4e-51  Score=378.87  Aligned_cols=236  Identities=18%  Similarity=0.131  Sum_probs=190.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC--------C-CceeccCCchhHHHhhccCChHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--------G-RAFCAGGDIVSLYHFMNQGKLEECKDFF   71 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~--------g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~   71 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|++||+|||||.        | ++||+|+|++++................
T Consensus       179 ~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~~~~~~~~~~~~  258 (440)
T 2np9_A          179 RLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRREL  258 (440)
T ss_dssp             EEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCcchhhhhhHHHH
Confidence            589999999999999999999999999999999999999994        6 8999999999875421111110011111


Q ss_pred             HHHHHHHHHH------------hhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh
Q 021410           72 RTLYSFIYLL------------GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH  139 (312)
Q Consensus        72 ~~~~~~~~~l------------~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r  139 (312)
                      ..+..++..+            .++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++| +++|++
T Consensus       259 ~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~P~~g-~~~L~r  337 (440)
T 2np9_A          259 GYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAA-NLRLGR  337 (440)
T ss_dssp             THHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTH-HHHHHH
T ss_pred             HHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccCcCcchH-HHHHHH
Confidence            2233444443            479999999999999999999999999999999999999999999999887 689999


Q ss_pred             cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHH
Q 021410          140 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV  218 (312)
Q Consensus       140 ~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (312)
                      ++|.. +++|++||+.|+|+||+++||||+|||++++.+.+..+                                    
T Consensus       338 lvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~------------------------------------  381 (440)
T 2np9_A          338 FAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERS------------------------------------  381 (440)
T ss_dssp             HHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHH------------------------------------
T ss_pred             HhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHH------------------------------------
Confidence            99999 99999999999999999999999999987765433222                                    


Q ss_pred             HhhcCCCCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHH---HHHHHHHHHHHHhhhcCC
Q 021410          219 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFD---ECLVREYRMSLQGVSRLI  295 (312)
Q Consensus       219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~---~~l~~e~~~~~~~~~~~~  295 (312)
                                                     ++++   ++.+++.+|++++.... .++   +.++.|...+..++.   
T Consensus       382 -------------------------------A~~l---a~~Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~---  423 (440)
T 2np9_A          382 -------------------------------LTRL---DGDAVLANRRMLNLADE-SPDGFRAYMAEFALMQALRLY---  423 (440)
T ss_dssp             -------------------------------HHTT---CSHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHT---
T ss_pred             -------------------------------HHHh---CHHHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhc---
Confidence                                           3333   56899999999987754 443   556666677777777   


Q ss_pred             CCChhhhhheeeccCC
Q 021410          296 SGDFYEVSNFQILNKH  311 (312)
Q Consensus       296 ~~d~~eg~~a~l~~r~  311 (312)
                      |+|++||+++|++||.
T Consensus       424 s~D~~Egv~AFleKR~  439 (440)
T 2np9_A          424 GHDVIDKVGRFGGRPP  439 (440)
T ss_dssp             CHHHHHHHHTCC----
T ss_pred             CHHHHHHHHHHHhCCC
Confidence            9999999999999986

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=100.00  E-value=6.4e-50  Score=352.74  Aligned_cols=214  Identities=17%  Similarity=0.231  Sum_probs=190.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..    .+.+....+....++++..
T Consensus        28 ~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~----~~~~~~~~~~~~~~~~~~~  103 (257)
T 1szo_A           28 LVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNL----GTPHDWDEIIFEGQRLLNN  103 (257)
T ss_dssp             EEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCC----SSHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhc----CCHHHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998642    1223333444556678888


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEec-CCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-PETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~-pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|++++|.. ++++++||+.++|+
T Consensus       104 l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG~~~~A~  182 (257)
T 1szo_A          104 LLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDAR  182 (257)
T ss_dssp             HHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHH
T ss_pred             HHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHH
Confidence            99999999999999999 5999999999999999999999 999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       183 eA~~~GLv~~vv~~~~l~~~a~~---------------------------------------------------------  205 (257)
T 1szo_A          183 TALDYGAVNEVLSEQELLPRAWE---------------------------------------------------------  205 (257)
T ss_dssp             HHHHHTSCSEEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHCCCceEEeChHHHHHHHHH---------------------------------------------------------
Confidence            99999999999997776544433                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHH
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM  286 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~  286 (312)
                                .+++|++.||.+++.+|++++.....++++.++.|...
T Consensus       206 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~~~~~  243 (257)
T 1szo_A          206 ----------LARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLAH  243 (257)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHHHH
Confidence                      37899999999999999999988877888888876543

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=100.00  E-value=9.6e-50  Score=355.81  Aligned_cols=222  Identities=19%  Similarity=0.280  Sum_probs=186.0

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChH-HHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE-ECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~-~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.......... ........+..++.
T Consensus        32 ~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (279)
T 3t3w_A           32 TITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSL  111 (279)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHHHHHHHHTHHHHH
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999876432111111 11222344556778


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |++++..+ ++++|.. +.++++||++++|+
T Consensus       112 ~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG~~~A~~llltG~~i~A~  189 (279)
T 3t3w_A          112 RWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELGPRKAKEILFTGRAMTAE  189 (279)
T ss_dssp             HHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcCHHHHHHHHHcCCccCHH
Confidence            899999999999999999999999999999999999999999999999 44444443 8999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.++                                                        
T Consensus       190 eA~~~GLv~~vv~~~~l~~~a~~~--------------------------------------------------------  213 (279)
T 3t3w_A          190 EVAQTGMVNRVVPRDRLDAETRAL--------------------------------------------------------  213 (279)
T ss_dssp             HHHHHTSCSEEECGGGHHHHHHHH--------------------------------------------------------
T ss_pred             HHHHCCCCcEeeChHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999998887555443                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHhh
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRF-QTFDECLVREYRMSLQGV  291 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~  291 (312)
                                 +++|++.||.+++.+|++++.... .+++++++.++......-
T Consensus       214 -----------a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~  256 (279)
T 3t3w_A          214 -----------AGEIAKMPPFALRQAKRAVNQTLDVQGFYAAIQSVFDIHQTGH  256 (279)
T ss_dssp             -----------HHHHHTSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             -----------HHHHHcCCHHHHHHHHHHHHHhhhcccHHHHHHHHhhHHHHHH
Confidence                       889999999999999999998764 488999988887765443

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=100.00  E-value=9e-50  Score=395.61  Aligned_cols=261  Identities=20%  Similarity=0.278  Sum_probs=212.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+||+++....  . ..       .+..++..
T Consensus        33 ~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~--~-~~-------~~~~~~~~  101 (742)
T 3zwc_A           33 MIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFT--P-GL-------ALGSLVDE  101 (742)
T ss_dssp             EEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSC--S-CS-------HHHHHHHH
T ss_pred             EEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccC--h-hH-------HHHHHHHH
Confidence            59999997 69999999999999999999999999999999999999999999875432  1 11       23456778


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. |++|++||+.++|+|
T Consensus       102 i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~~i~a~e  181 (742)
T 3zwc_A          102 IQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADE  181 (742)
T ss_dssp             HHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             HHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCCchhHHH
Confidence            8999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++.++...+...+++.+++...+..+...     +.                ........+       
T Consensus       182 A~~~GLv~~vv~~d~~~~A~~~A~~ia~~~~~~~~~~~~~~-----~~----------------~~~~~~~~~-------  233 (742)
T 3zwc_A          182 ALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKPV-----PS----------------LPNMDSVFA-------  233 (742)
T ss_dssp             HHHHTSCSEEESSCHHHHHHHHHHHHTTSCSGGGCGGGSCC-----CC----------------CTTHHHHHH-------
T ss_pred             HHHcCCccEecCchhhHHHHHHHHHHhcCCchhhhhhcccc-----cc----------------cchhhhhHH-------
Confidence            99999999999987665433333556655554332211110     00                011111111       


Q ss_pred             CCCchHHHHHHHHHHh--cCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKE--ASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~--~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              ....++.+  ..+.|...+++.++.+...+++++++.|.+.|..++.   |++.++++++|+.+|.
T Consensus       234 --------~~~~~~~k~~~~~~A~~~~~~~v~~~~~~~~~~gl~~E~~~F~~l~~---s~~~k~~~~aFf~~r~  296 (742)
T 3zwc_A          234 --------EAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRA---SGQAKALQYAFFAEKS  296 (742)
T ss_dssp             --------HHHHHHHHHSTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHhhhccchhHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHhh
Confidence                    11122222  2346888899999999999999999999999999998   9999999999998764

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=100.00  E-value=9.4e-48  Score=382.55  Aligned_cols=275  Identities=15%  Similarity=0.128  Sum_probs=218.0

Q ss_pred             CEEecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCC-ceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||+ +.|+||.+|+.+|.+++++++.|+++|+||||| |+ +||+|+|++++.... ..+.+....+...++.++
T Consensus        19 ~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~   96 (715)
T 1wdk_A           19 ELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENF-KLPDAELIAGNLEANKIF   96 (715)
T ss_dssp             EEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHT-TSCHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcc-cCCHHHHHHHHHHHHHHH
Confidence            58999998 899999999999999999999999999999999 86 999999999886432 112223344556677888


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.+|++||+.++|
T Consensus        97 ~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A~~l~ltG~~~~a  176 (715)
T 1wdk_A           97 SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRA  176 (715)
T ss_dssp             HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEH
T ss_pred             HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999998 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHH-hhhhcC--CHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHH
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEEL-GKLVTD--DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSL  234 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  234 (312)
                      +||+++||||+|+|++++.+.+.++ .+++..  ++....    .......+.. ..              .....+.  
T Consensus       177 ~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~----~~~~~p~~~~-~~--------------~~~~~~~--  235 (715)
T 1wdk_A          177 EDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR----QPKLEKLKLN-AI--------------EQMMAFE--  235 (715)
T ss_dssp             HHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH----GGGGSCCSCC-HH--------------HHHHHHH--
T ss_pred             HHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc----ccccCccccC-ch--------------hHHHHHH--
Confidence            9999999999999988888777666 334333  211110    0000000000 00              0000000  


Q ss_pred             HcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          235 ESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       235 ~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+.+.+.+-.+..-.|...+|++++.+...+++++++.|.+.+..++.   |+|++|++++|+++|.
T Consensus       236 ----------~~k~~~~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~---s~~~~~~~~aF~~kr~  299 (715)
T 1wdk_A          236 ----------TAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAK---TSASNCLIGLFLNDQE  299 (715)
T ss_dssp             ----------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc---chhHHHHHHHHHhhhh
Confidence                      111223333444455788899999999889999999999999999998   9999999999998873

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=100.00  E-value=1.2e-47  Score=381.93  Aligned_cols=270  Identities=18%  Similarity=0.215  Sum_probs=210.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCC-ceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +|||||| +.|+||.+|+.+|.+++++++.|+++|+||||| |+ +||+|+|++++.... .........+...++.++.
T Consensus        20 ~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~-~~~~~~~~~~~~~~~~~~~   96 (725)
T 2wtb_A           20 VITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQ-KGNVKEPKAGYISIDIITD   96 (725)
T ss_dssp             EEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC-------------CCSSSHHHHHCCCC
T ss_pred             EEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhccc-chhhhhHHHHHHHHHHHHH
Confidence            5899999 799999999999999999999999999999999 86 999999999875321 0000000112334556667


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +.+|++||+.++|+
T Consensus        97 ~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~l~ltG~~~~a~  176 (725)
T 2wtb_A           97 LLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAE  176 (725)
T ss_dssp             CCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHHHHHcCCCCCHH
Confidence            78899999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHH-hhhhcC--CHH-HHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHH
Q 021410          159 EMMACGLATHYSVSEKLPLIEEEL-GKLVTD--DPS-VIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSL  234 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~-~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  234 (312)
                      ||+++||||+|+|++++.+.+.++ .+++..  ++. .++     +.. ..                   +......+.+
T Consensus       177 eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~-----~~~-~~-------------------~~~~~~~~~~  231 (725)
T 2wtb_A          177 EGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVS-----KTD-KL-------------------PPLGEAREIL  231 (725)
T ss_dssp             HHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGG-----CCT-TS-------------------CCHHHHHHHH
T ss_pred             HHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhh-----hcc-cc-------------------CccchHHHHH
Confidence            999999999999999887766665 233222  110 000     000 00                   0000111111


Q ss_pred             HcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          235 ESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       235 ~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +|+.+.+++..+.+| +...+|++++.+...+++++++.|.+.+..++.   |+|++|++++|+++|.
T Consensus       232 ---------~~a~~~~~~~~~g~p-A~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~---s~~~~~~~~aF~~kr~  295 (725)
T 2wtb_A          232 ---------TFAKAQTLKRAPNMK-HPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVK---LDTTKGLIHVFFSQRG  295 (725)
T ss_dssp             ---------HHHHHHHHHHCTTCC-HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHG
T ss_pred             ---------HHHHHHHHHhccCCc-HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc---chhHHHHHHHhhhhhh
Confidence                     355566777777755 566799999999999999999999999999998   9999999999998874

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=100.00  E-value=1.3e-43  Score=333.42  Aligned_cols=178  Identities=16%  Similarity=0.192  Sum_probs=160.2

Q ss_pred             CEEecCCC----------CCCCCCHHHHHHHHHHHHHhhcC-CCceEEEEEe-CCCceeccCCchhHHHhhccCChHHHH
Q 021410            1 MAILNRPS----------ALNALNTNMGAKLNKLFKAWEND-PNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLEECK   68 (312)
Q Consensus         1 ~itln~p~----------~~Nal~~~~~~~L~~~l~~~~~d-~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~   68 (312)
                      +||||||+          +.|++|.+|+.+|.++++.++.| +++|+||||| .|++||+|+|++++....    .....
T Consensus        33 ~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~~~----~~~~~  108 (556)
T 2w3p_A           33 TLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLST----HAWKV  108 (556)
T ss_dssp             EEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHHSC----HHHHH
T ss_pred             EEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhhcc----cHHHH
Confidence            58999998          89999999999999999999999 9999999999 889999999999876421    22223


Q ss_pred             HHHHHHHHHHHHH----hhCCCcEEEEEccceecccceeecCCCeEEEeCc--eeEecCCCc-ccccCCCchHHHhh--h
Q 021410           69 DFFRTLYSFIYLL----GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPDAGASFYLS--H  139 (312)
Q Consensus        69 ~~~~~~~~~~~~l----~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~--a~f~~pe~~-~G~~p~~g~~~~l~--r  139 (312)
                      .+...++.++..+    .++||||||+|||+|+|||++|+++||+|||+++  ++|++||++ +|++|++|++++|+  |
T Consensus       109 ~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt~rLp~~R  188 (556)
T 2w3p_A          109 NFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKR  188 (556)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCccHHHHHHhhc
Confidence            3445566777788    8999999999999999999999999999999999  999999999 99999999999999  9


Q ss_pred             cChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 021410          140 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL  182 (312)
Q Consensus       140 ~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~  182 (312)
                      ++|.. +.++++||+.|+|+||+++||||+|+|++++.+.+.++
T Consensus       189 lVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~l  232 (556)
T 2w3p_A          189 KVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQAR  232 (556)
T ss_dssp             CCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHH
Confidence            99998 99999999999999999999999999987776555444

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=99.86  E-value=1.4e-22  Score=197.65  Aligned_cols=162  Identities=18%  Similarity=0.188  Sum_probs=131.9

Q ss_pred             CEEecCCCCCCC--CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNA--LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Na--l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +|++|+|.+.|+  ++..+..+|.++|+.++.|+++|+|||++.    |.|+|+...                ..+++.+
T Consensus       305 vI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~----spGG~~~~~----------------~~i~~~i  364 (593)
T 3bf0_A          305 VVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTAS----------------EVIRAEL  364 (593)
T ss_dssp             EEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEE----EEEECHHHH----------------HHHHHHH
T ss_pred             EEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEec----CCCCCHHHH----------------HHHHHHH
Confidence            589999998898  688999999999999999999999999998    468887532                1234556


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCC------------cccccCCC-------------ch
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDA-------------GA  133 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~------------~~G~~p~~-------------g~  133 (312)
                      ..+..++|||||+|+|.|.|||+.|+++||+++|++++.|+.|++            ++|+.|+.             +.
T Consensus       365 ~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~  444 (593)
T 3bf0_A          365 AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRAL  444 (593)
T ss_dssp             HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCC
T ss_pred             HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCC
Confidence            667789999999999999999999999999999999999999985            58887643             22


Q ss_pred             H---------------HHhhhcChHH------HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHH
Q 021410          134 S---------------FYLSHLPGHL------GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL  182 (312)
Q Consensus       134 ~---------------~~l~r~~g~~------a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~  182 (312)
                      +               ..+.+.++..      +.+++++|+.++|+||+++||||++++.+++.+.+..+
T Consensus       445 t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~  514 (593)
T 3bf0_A          445 PPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAEL  514 (593)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHH
Confidence            2               3344444421      57889999999999999999999999766665444444

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=99.83  E-value=1.4e-20  Score=163.75  Aligned_cols=143  Identities=13%  Similarity=0.065  Sum_probs=113.1

Q ss_pred             HHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhh-CCCcEEEEEccce
Q 021410           18 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT-HLKPHVAILNGVT   96 (312)
Q Consensus        18 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kp~Iaav~G~a   96 (312)
                      +.+|.++|+.+..|+++|+|||++.    |.|+|+....                .+++.+..+.. ++|||||+|+|.|
T Consensus        31 ~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~----------------~i~~~l~~~~~~~~kPVia~v~g~a   90 (240)
T 3rst_A           31 HRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA----------------EIHKKLEEIKKETKKPIYVSMGSMA   90 (240)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH----------------HHHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH----------------HHHHHHHHHHHhCCCeEEEEECCee
Confidence            5899999999999999999999997    7899886421                23445556666 8999999999999


Q ss_pred             ecccceeecCCCeEEEeCceeEecC---------------------CCcccccCCCchHH--------------------
Q 021410           97 MGGGAGVSIPGTFRVACGKTVFATP---------------------ETLIGFHPDAGASF--------------------  135 (312)
Q Consensus        97 ~GgG~~lal~~D~~ia~~~a~f~~p---------------------e~~~G~~p~~g~~~--------------------  135 (312)
                      .|||++|+++||++||++++.|+.+                     +++.|-+++.+..+                    
T Consensus        91 ~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~  170 (240)
T 3rst_A           91 ASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYE  170 (240)
T ss_dssp             ETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             hHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999                     55677666665221                    


Q ss_pred             ------HhhhcChHHHHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHH
Q 021410          136 ------YLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE  180 (312)
Q Consensus       136 ------~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~  180 (312)
                            .-.|.+.....+-+++|+.+++++|+++||||++.+.+++.+...
T Consensus       171 ~f~~~Va~~R~l~~~~~~~~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~  221 (240)
T 3rst_A          171 GFVDVISKGRGMPKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTITAMK  221 (240)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHCSSCEEEHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHHHHHHH
Confidence                  223444444334478999999999999999999997665544333

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=99.81  E-value=4.4e-20  Score=158.46  Aligned_cols=141  Identities=12%  Similarity=0.203  Sum_probs=118.1

Q ss_pred             EEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410            2 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL   81 (312)
Q Consensus         2 itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (312)
                      |+++     |+++..+...|.++|+.++++ ++++|+|+..    |.|+|+...                   ..++..|
T Consensus        13 I~i~-----g~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~-------------------~~i~~~i   63 (230)
T 3viv_A           13 AQIK-----GQITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM-------------------MNIVQRI   63 (230)
T ss_dssp             EEEE-----SCBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH-------------------HHHHHHH
T ss_pred             EEEe-----CEECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH-------------------HHHHHHH
Confidence            5666     579999999999999999864 6999999987    788877532                   2455567


Q ss_pred             hhCCCcEEEEE---ccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchH---------------HHhhhcChH
Q 021410           82 GTHLKPHVAIL---NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS---------------FYLSHLPGH  143 (312)
Q Consensus        82 ~~~~kp~Iaav---~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~---------------~~l~r~~g~  143 (312)
                      ..++||||++|   +|.|.|+|+.|+++||+++|.++++|+.+++..+. |..|.+               ..+++..|.
T Consensus        64 ~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr  142 (230)
T 3viv_A           64 QQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQESGR  142 (230)
T ss_dssp             HTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHHhCc
Confidence            78999999999   99999999999999999999999999999987533 444432               146677785


Q ss_pred             --H-HHHHHhcCCCCCHHHHHHcCccceecCC
Q 021410          144 --L-GEFLALTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       144 --~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                        . +.+++.++..++|+||+++||||+|+++
T Consensus       143 ~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~  174 (230)
T 3viv_A          143 NATIAEEFITKDLSLTPEEALKYGVIEVVARD  174 (230)
T ss_dssp             CHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred             CHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence              4 8999999999999999999999999975

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=99.67  E-value=2.5e-16  Score=134.64  Aligned_cols=138  Identities=11%  Similarity=0.093  Sum_probs=108.2

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+.+++.+.|..++.|++++.|+|.-    .|.|+++..-                   ..++..|..+++||++.+
T Consensus        54 I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~ag-------------------~~I~~~i~~~~~pV~t~v  110 (218)
T 1y7o_A           54 VEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSAG-------------------LAIVDTMNFIKADVQTIV  110 (218)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHHH-------------------HHHHHHHHHSSSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence            78899999999999999888788888874    4677766421                   134455677899999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCch------------------HHHhhhcChH--H-HHHHH
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGA------------------SFYLSHLPGH--L-GEFLA  149 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~------------------~~~l~r~~g~--~-a~~l~  149 (312)
                      +|.|.++|+.|+++||.  |+|.++++|++++.. |.+|..|.                  ...+++..|.  . +.+++
T Consensus       111 ~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~  189 (218)
T 1y7o_A          111 MGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADA  189 (218)
T ss_dssp             EEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             ccEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            99999999999999999  999999999999987 44443333                  2445555564  3 67888


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEK  174 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~  174 (312)
                      .+|+.++|+||+++||||+|+++++
T Consensus       190 ~~~~~~ta~EA~e~GLVD~v~~~~~  214 (218)
T 1y7o_A          190 ERDNWMSAQETLEYGFIDEIMANNS  214 (218)
T ss_dssp             HSCCCBCHHHHHHHTSCSEECCCC-
T ss_pred             hCCCEEcHHHHHHCCCCcEEcCcCC
Confidence            8999999999999999999998765

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.64  E-value=5.3e-16  Score=138.59  Aligned_cols=145  Identities=14%  Similarity=0.161  Sum_probs=113.0

Q ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH--
Q 021410            4 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL--   81 (312)
Q Consensus         4 ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--   81 (312)
                      .|..-..|+++..+...+.++++.+.++ .+.+|+|++.|     |+|+.+...        ..    ..+.+++..+  
T Consensus       125 ~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~--------~l----~~~~~i~~al~~  186 (304)
T 2f9y_B          125 FEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALM--------SL----MQMAKTSAALAK  186 (304)
T ss_dssp             ECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHH--------HH----HHHHHHHHHHHH
T ss_pred             EcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHH--------HH----HHHHHHHHHHHH
Confidence            3333468999999999999999999988 89999999966     888865321        11    1223344444  


Q ss_pred             -hhCCCcEEEEEccceeccc-ceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH
Q 021410           82 -GTHLKPHVAILNGVTMGGG-AGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE  159 (312)
Q Consensus        82 -~~~~kp~Iaav~G~a~GgG-~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e  159 (312)
                       ...++|+|++|+|.|.||| +.++++||++||.++|+|++.           +...+++.+|..     ++++..+|++
T Consensus       187 ~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~-----l~~~~~~Ae~  250 (304)
T 2f9y_B          187 MQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK-----LPPGFQRSEF  250 (304)
T ss_dssp             HHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC-----CCTTTTBHHH
T ss_pred             HhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc-----CCcccCCHHH
Confidence             4569999999999999999 888999999999999999997           344455555532     5688899999


Q ss_pred             HHHcCccceecCCCChhHHHHHH
Q 021410          160 MMACGLATHYSVSEKLPLIEEEL  182 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~  182 (312)
                      +.++|+||.|++++++.+....+
T Consensus       251 ~~~~Glvd~Vv~~~el~~~l~~l  273 (304)
T 2f9y_B          251 LIEKGAIDMIVRRPEMRLKLASI  273 (304)
T ss_dssp             HGGGTCCSEECCHHHHHHHHHHH
T ss_pred             HHhcCCccEEeCcHHHHHHHHHH
Confidence            99999999999887665554444

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=99.55  E-value=2.7e-14  Score=128.65  Aligned_cols=139  Identities=11%  Similarity=0.031  Sum_probs=101.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..++++++......+.++.+++.. +-+|.|.-.++     +.+..-..         .......+..++..+..+++|+
T Consensus       137 ~~G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~G-----a~~g~~ae---------~~g~~~~~a~~l~al~~~~vPv  201 (327)
T 2f9i_A          137 NFGMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKG-----AYPGKAAE---------ERGQSESIATNLIEMASLKVPV  201 (327)
T ss_dssp             GGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESC-----SCCCHHHH---------HTTHHHHHHHHHHHHHTCSSCE
T ss_pred             hcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCC-----CCcchhhh---------hhhhHHHHHHHHHHHHhCCCCE
Confidence            347899999999999999988765 44555554332     22221110         0012334456677788999999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccc
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      |++|+|.|.|||+.++++||++||.++++|++      +.|.++++.++.+..+.. +.++    ..++|++|+++|+||
T Consensus       202 IavV~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd  271 (327)
T 2f9i_A          202 IAIVIGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIID  271 (327)
T ss_dssp             EEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSS
T ss_pred             EEEEECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCce
Confidence            99999999999999999999999999999985      345555555444443434 6665    779999999999999


Q ss_pred             eecCC
Q 021410          168 HYSVS  172 (312)
Q Consensus       168 ~vv~~  172 (312)
                      +|+|.
T Consensus       272 ~VV~e  276 (327)
T 2f9i_A          272 DVISE  276 (327)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99984

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.54  E-value=4.9e-14  Score=127.41  Aligned_cols=139  Identities=11%  Similarity=-0.020  Sum_probs=107.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..++++++......+.++.+++.. +-+|.|.-.+     |+.+..-..         .......+..++..+..+++|+
T Consensus       151 ~~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~-----Ga~~g~~aE---------~~g~~~~~a~~l~al~~~~vPv  215 (339)
T 2f9y_A          151 NFGMPAPEGYRKALRLMQMAERFK-MPIITFIDTP-----GAYPGVGAE---------ERGQSEAIARNLREMSRLGVPV  215 (339)
T ss_dssp             GGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEES-----CSCCSHHHH---------HTTHHHHHHHHHHHHHTCSSCE
T ss_pred             hcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCC-----CCccchHHH---------HHHHHHHHHHHHHHHHhCCCCE
Confidence            347899999999999999988764 4555555533     333221111         0112334456677888999999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccc
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      |++|+|.|.|||+.++++||++||.++++|++      +.|.+++++++.+..+.. +.++    ..++|++|+++|+||
T Consensus       216 IavV~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd  285 (339)
T 2f9y_A          216 VCTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLID  285 (339)
T ss_dssp             EEEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCS
T ss_pred             EEEEeCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCee
Confidence            99999999999999999999999999999997      457777777777776656 7776    679999999999999


Q ss_pred             eecCC
Q 021410          168 HYSVS  172 (312)
Q Consensus       168 ~vv~~  172 (312)
                      +|+|.
T Consensus       286 ~VV~e  290 (339)
T 2f9y_A          286 SIIPE  290 (339)
T ss_dssp             CCCCC
T ss_pred             EEecC
Confidence            99984

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=99.14  E-value=1.9e-10  Score=97.46  Aligned_cols=136  Identities=15%  Similarity=0.097  Sum_probs=99.1

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++..+...+.+.|..++.++.++.|+|.=.    |.|+++..                   ...++..|..+++||++.
T Consensus        35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~In----SPGG~v~a-------------------~~~I~~~i~~~~~pV~~~   91 (208)
T 2cby_A           35 EVNDEIANRLCAQILLLAAEDASKDISLYIN----SPGGSISA-------------------GMAIYDTMVLAPCDIATY   91 (208)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHH-------------------HHHHHHHHHHCSSCEEEE
T ss_pred             EECHHHHHHHHHHHHHHHhCCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHhcCCCEEEE
Confidence            3678899999999999988777777776543    55665532                   123455567789999999


Q ss_pred             EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchH------------------HHhhhcCh--HH-HHHH
Q 021410           92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS------------------FYLSHLPG--HL-GEFL  148 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~------------------~~l~r~~g--~~-a~~l  148 (312)
                      +.|.|.++|..++++||.  |++.+++.+++....-|.   .|..                  ..+.+..|  .. ..++
T Consensus        92 v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~  168 (208)
T 2cby_A           92 AMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEAD  168 (208)
T ss_dssp             EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             ECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence            999999999999999999  999999999988765332   1110                  01222222  22 4556


Q ss_pred             HhcCCCCCHHHHHHcCccceecCCC
Q 021410          149 ALTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       149 ~ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      +..|..++|+||+++||||++.+..
T Consensus       169 ~~~~~~~ta~eA~e~GLvD~i~~~~  193 (208)
T 2cby_A          169 SDRDRWFTAAEALEYGFVDHIITRA  193 (208)
T ss_dssp             HHTTCEEEHHHHHHHTSCSEECSCC
T ss_pred             HhCCcEEcHHHHHHcCCCcEecCch
Confidence            7889999999999999999999653

>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A

Probab=98.83  E-value=2.3e-08  Score=83.95  Aligned_cols=140  Identities=14%  Similarity=0.080  Sum_probs=98.4

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++..+...+...|..++.++..+.|+|.=.    |.|+++..                   ...++..|..+++||++.
T Consensus        35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~~-------------------~~~I~~~i~~~~~~V~t~   91 (203)
T 3qwd_A           35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYIN----SPGGSVTA-------------------GFAIYDTIQHIKPDVQTI   91 (203)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHH-------------------HHHHHHHHHHSSSCEEEE
T ss_pred             EECHHHHHHHHHHHHHHHhcCCCCCEEEEEe----CCCCCHHH-------------------HHHHHHHHHHhcCCcEEE
Confidence            3788999999999999988776776666544    55665532                   123445566789999999


Q ss_pred             EccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchH----HHh-----------hhcChH--H-HHHHHhc
Q 021410           92 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS----FYL-----------SHLPGH--L-GEFLALT  151 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~----~~l-----------~r~~g~--~-a~~l~lt  151 (312)
                      +.|.|.++|..++++||  .|++.++++|.+....-|..-...-.    ..+           .+.-|.  . ...++-.
T Consensus        92 ~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~  171 (203)
T 3qwd_A           92 CIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDR  171 (203)
T ss_dssp             EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTS
T ss_pred             EeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhc
Confidence            99999999999999999  69999999999876543321111000    011           111121  2 3455555


Q ss_pred             CCCCCHHHHHHcCccceecCCCC
Q 021410          152 GAKLNGAEMMACGLATHYSVSEK  174 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~~  174 (312)
                      ...++|+||+++||||+|+++..
T Consensus       172 d~~lta~EA~e~GliD~I~~~~~  194 (203)
T 3qwd_A          172 DNFLTAEEAKEYGLIDEVMVPET  194 (203)
T ss_dssp             CCCEEHHHHHHHTSCSEECCCCC
T ss_pred             CceecHHHHHHcCCcCEecCCcc
Confidence            67799999999999999997653

>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A

Probab=98.82  E-value=7.5e-09  Score=86.56  Aligned_cols=134  Identities=16%  Similarity=0.087  Sum_probs=95.8

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+.+.|..++.++.++.|+|.=.    |.|+++..                   ...++..|..+++||++.+
T Consensus        35 I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~a-------------------~~~I~~~i~~~~~pV~~~v   91 (193)
T 1yg6_A           35 VEDHMANLIVAQMLFLEAENPEKDIYLYIN----SPGGVITA-------------------GMSIYDTMQFIKPDVSTIC   91 (193)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHH-------------------HHHHHHHHHHSSSCEEEEE
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CcCCCHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence            678889999999999887776787777654    56666532                   1234455667889999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH------------------HhhhcChH--H-HHHHH
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF------------------YLSHLPGH--L-GEFLA  149 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~------------------~l~r~~g~--~-a~~l~  149 (312)
                      .|.|..+|..++++||.  |++.+++.+++.....|..   |...                  .+.+..|.  . ...++
T Consensus        92 ~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~---G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~  168 (193)
T 1yg6_A           92 MGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ---GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT  168 (193)
T ss_dssp             EEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEE---EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHT
T ss_pred             eeeHHHHHHHHHHCCCcCcEEEecCcEEEEEecccccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Confidence            99999999999999999  9999999998876543321   1110                  01111121  1 23443


Q ss_pred             hcCCCCCHHHHHHcCccceecCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      -.+..++|+||+++||||+++++
T Consensus       169 ~~~~~~ta~eA~~~GliD~i~~~  191 (193)
T 1yg6_A          169 ERDRFLSAPEAVEYGLVDSILTH  191 (193)
T ss_dssp             SSCEEEEHHHHHHHTSSSEECCC
T ss_pred             cCCeEEcHHHHHHcCCCCEecCC
Confidence            34556799999999999999864

>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1

Probab=98.78  E-value=4.1e-08  Score=83.31  Aligned_cols=137  Identities=12%  Similarity=0.030  Sum_probs=93.3

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+...+.+.|..++.++. +.|+|.=.    |.|+++..                   ...++..|...++||++.+
T Consensus        48 I~~~~a~~i~~~L~~l~~~~~-k~I~l~IN----SPGGsv~a-------------------~~~I~~~i~~~~~pV~t~v  103 (215)
T 2f6i_A           48 INKKTADELISQLLYLDNINH-NDIKIYIN----SPGGSINE-------------------GLAILDIFNYIKSDIQTIS  103 (215)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCC-SCEEEEEE----ECCBCHHH-------------------HHHHHHHHHHSSSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhCCC-CcEEEEEE----CCCCCHHH-------------------HHHHHHHHHhcCCCEEEEE
Confidence            678888999999998876655 76666544    55665532                   1234555677889999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccC---CCchH-HHh-----------hhcCh--HH-HHHHHhcC
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHP---DAGAS-FYL-----------SHLPG--HL-GEFLALTG  152 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p---~~g~~-~~l-----------~r~~g--~~-a~~l~ltg  152 (312)
                      .|.|..+|..++++||.  |+|.+++.+++.....|...   +.... ..+           .+..|  .. ...++-.+
T Consensus       104 ~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~  183 (215)
T 2f6i_A          104 FGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRD  183 (215)
T ss_dssp             EEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTT
T ss_pred             eeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCC
Confidence            99999999999999999  99999999988765433211   11000 000           11111  12 33444344


Q ss_pred             CCCCHHHHHHcCccceecCCC
Q 021410          153 AKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       153 ~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      ..++|+||+++||||++.++.
T Consensus       184 ~~lta~eA~e~GLiD~I~~~~  204 (215)
T 2f6i_A          184 YYMNALEAKQYGIIDEVIETK  204 (215)
T ss_dssp             CEECHHHHHHHTSCSEECCCS
T ss_pred             eecCHHHHHHCCCCCEecCCc
Confidence            567999999999999999754

>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1

Probab=98.73  E-value=4.9e-08  Score=85.36  Aligned_cols=136  Identities=13%  Similarity=0.058  Sum_probs=95.5

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL   92 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav   92 (312)
                      ++..+.+.+...|..++.++..+.|+|.=.    |.|+++..-                   ..++..|...++||++.+
T Consensus        91 I~d~~a~~iiaqL~~l~~ed~~k~I~L~IN----SPGGsV~ag-------------------~aIyd~I~~~k~pV~t~v  147 (277)
T 1tg6_A           91 IDDSVASLVIAQLLFLQSESNKKPIHMYIN----SPGGVVTAG-------------------LAIYDTMQYILNPICTWC  147 (277)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHHH-------------------HHHHHHHHHSCSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHHH-------------------HHHHHHHHhcCCCEEEEE
Confidence            678888999999988876555677777654    556655321                   234455667889999999


Q ss_pred             ccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchH---HH---------------hhhcCh--HH-HHHHH
Q 021410           93 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS---FY---------------LSHLPG--HL-GEFLA  149 (312)
Q Consensus        93 ~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~---~~---------------l~r~~g--~~-a~~l~  149 (312)
                      .|.|..+|..|+++||.  |++.+++.++......|.   .|..   ..               +.+..|  .. ...++
T Consensus       148 ~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~  224 (277)
T 1tg6_A          148 VGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAM  224 (277)
T ss_dssp             EEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             ccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            99999999999999999  999999999886654332   1211   00               011111  12 34444


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEK  174 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~  174 (312)
                      -.+..++|+||+++||||++....+
T Consensus       225 drd~~lta~EAle~GLID~I~~~~~  249 (277)
T 1tg6_A          225 ERDRYMSPMEAQEFGILDKVLVHPP  249 (277)
T ss_dssp             SSCEEECHHHHHHHTSCSEECSSCC
T ss_pred             hcCcccCHHHHHHCCCCCEecCcch
Confidence            4456779999999999999997543

>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1

Probab=98.63  E-value=3.1e-08  Score=83.08  Aligned_cols=136  Identities=15%  Similarity=0.057  Sum_probs=95.7

Q ss_pred             CCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 021410           12 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI   91 (312)
Q Consensus        12 al~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa   91 (312)
                      .++..+...+...|..++.++..+.|+|.=.    |.|+++..                   ...++..|...++||++.
T Consensus        38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~-------------------~~~I~~~i~~~~~~v~t~   94 (201)
T 3p2l_A           38 EVNDHSANLVIAQLLFLESEDPDKDIYFYIN----SPGGMVTA-------------------GMGVYDTMQFIKPDVSTI   94 (201)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHHH-------------------HHHHHHHHHHSSSCEEEE
T ss_pred             EECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHH-------------------HHHHHHHHHHhCCCeEEE
Confidence            3688899999999999887766776666554    56666532                   123455567788999999


Q ss_pred             EccceecccceeecCCCe--EEEeCceeEecCCCcccccCCCchHH-------Hhh-----------hcChH--H-HHHH
Q 021410           92 LNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF-------YLS-----------HLPGH--L-GEFL  148 (312)
Q Consensus        92 v~G~a~GgG~~lal~~D~--~ia~~~a~f~~pe~~~G~~p~~g~~~-------~l~-----------r~~g~--~-a~~l  148 (312)
                      +.|.|.++|..+++++|-  |++.+++++.+....-|.   .|-..       .+.           +..|.  . ...+
T Consensus        95 ~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~  171 (201)
T 3p2l_A           95 CIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKD  171 (201)
T ss_dssp             EEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             EcCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence            999999999999999998  999999999887765332   12111       011           11121  1 2334


Q ss_pred             HhcCCCCCHHHHHHcCccceecCCC
Q 021410          149 ALTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       149 ~ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      +-....++|+||+++||||+|+++.
T Consensus       172 ~~~~~~lta~EA~e~GliD~I~~~~  196 (201)
T 3p2l_A          172 TDRDNFMMADEAKAYGLIDHVIESR  196 (201)
T ss_dssp             TSSCEEEEHHHHHHHTSCSEECCCS
T ss_pred             hhcCeeecHHHHHHcCCccEecCCH
Confidence            3334457999999999999999753

>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A

Probab=98.27  E-value=3.2e-06  Score=70.69  Aligned_cols=142  Identities=11%  Similarity=0.068  Sum_probs=90.2

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCceEEE--EEeCCCc----eeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCC
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIGFVS--MKGSGRA----FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK   86 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~~vv--l~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k   86 (312)
                      ++.++.+.+...|..++.++..+-|.  |-+.|..    .-.-+|+.                   ....++..|...+.
T Consensus        37 I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~-------------------aglaIyd~m~~~~~   97 (205)
T 4gm2_A           37 IYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGIT-------------------DVISIVDVINYISS   97 (205)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHH-------------------HHHHHHHHHHHSSS
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHH-------------------HHHHHHHHHHhcCC
Confidence            78899999999998887544333333  3333311    00003322                   12345556777899


Q ss_pred             cEEEEEccceecccceeecCCC--eEEEeCceeEecCCCcccc-cCCCchHH----Hhhh-----------cChH--H-H
Q 021410           87 PHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGF-HPDAGASF----YLSH-----------LPGH--L-G  145 (312)
Q Consensus        87 p~Iaav~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~-~p~~g~~~----~l~r-----------~~g~--~-a  145 (312)
                      ||...+-|.|.+.|..|++++|  .|++.+++++.+-....|. .-...-..    .+-+           .-|.  . .
T Consensus        98 ~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I  177 (205)
T 4gm2_A           98 DVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVI  177 (205)
T ss_dssp             CEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred             CEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence            9999999999999999999999  5999999999877665444 11110000    0111           1111  1 2


Q ss_pred             HHHHhcCCCCCHHHHHHcCccceecCCC
Q 021410          146 EFLALTGAKLNGAEMMACGLATHYSVSE  173 (312)
Q Consensus       146 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~  173 (312)
                      ..++-....++|+||+++||||+|++.+
T Consensus       178 ~~~m~rd~~msa~EA~eyGlID~V~~~e  205 (205)
T 4gm2_A          178 SNVLERDKYFNADEAVDFKLIDHILEKE  205 (205)
T ss_dssp             HHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred             HHHhcCCcccCHHHHHHcCCccEeecCC
Confidence            3334445569999999999999998753

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=98.19  E-value=5.7e-06  Score=80.58  Aligned_cols=87  Identities=14%  Similarity=-0.025  Sum_probs=68.3

Q ss_pred             HHHHHHHHHHHhhcCCCceEEEEEeCCCceecc-CCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEEccc
Q 021410           17 MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAG-GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV   95 (312)
Q Consensus        17 ~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~   95 (312)
                      ...++.+.|+.+..|+.++.|+|.-.    |.| +++...                ..+++.+..+...+|||||.+++ 
T Consensus        71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~----------------~~I~~~i~~~k~~gkpvva~~~~-  129 (593)
T 3bf0_A           71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSM----------------QYIGKALKEFRDSGKPVYAVGEN-  129 (593)
T ss_dssp             EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHH----------------HHHHHHHHHHHHTTCCEEEEESC-
T ss_pred             CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHH----------------HHHHHHHHHHHhcCCeEEEEEcc-
Confidence            46788899999999999999999886    555 666432                22344555565668999999876 


Q ss_pred             eecccceeecCCCeEEEeCceeEecCCCc
Q 021410           96 TMGGGAGVSIPGTFRVACGKTVFATPETL  124 (312)
Q Consensus        96 a~GgG~~lal~~D~~ia~~~a~f~~pe~~  124 (312)
                      +..+|+.|+++||-+++.+.+.++...+.
T Consensus       130 aas~~y~lAsaad~i~~~P~~~vg~~g~~  158 (593)
T 3bf0_A          130 YSQGQYYLASFANKIWLSPQGVVDLHGFA  158 (593)
T ss_dssp             EEHHHHHHHTTSSEEEECTTCCEECCCCB
T ss_pred             chhHHHHHHHhCCEEEECCCceEEEeccc
Confidence            56678999999999999999998887664

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=97.94  E-value=1.1e-05  Score=77.76  Aligned_cols=147  Identities=10%  Similarity=-0.023  Sum_probs=96.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-++++.....+.++++.+.+.. +-+|.|.-     |+|+.+.+-.......  .   .+.. +..-...+....+|+
T Consensus       117 ~gGs~g~~~~~Ki~r~~e~A~~~~-lPvI~l~d-----SgGArlqe~~~~l~~~--~---~~g~-i~~~~~~ls~~giP~  184 (587)
T 1pix_A          117 LAGAWVPGQAECLLRASDTAKTLH-VPLVYVLN-----CSGVKFDEQEKVYPNR--R---GGGT-PFFRNAELNQLGIPV  184 (587)
T ss_dssp             TTTEECTTHHHHHHHHHHHHHHHT-CCEEEEEC-----CCEECGGGHHHHSSST--T---STTH-HHHHHHHHHHTTCCE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEe-----CCCCCccccchhcccc--c---cHHH-HHHHHHHHhCCCCCE
Confidence            455778888899999999888764 55666665     5677775432221100  0   0111 222344566788999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-HHHHH-hcCCCCCHHH-----H
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA-LTGAKLNGAE-----M  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~-ltg~~i~a~e-----A  160 (312)
                      |++|.|.|.|||... ..||++|+.++ +++++.-..  ++-...+    --.++.. +.+++ .||+.+++++     .
T Consensus       185 Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~~~~~----~~~~d~~~A~el~~~tge~v~~e~lgga~~  257 (587)
T 1pix_A          185 IVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMGGMNP----KGHVDLEYANEIADMVDRTGKTEPPGAVDI  257 (587)
T ss_dssp             EEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCCSCCS----SSSCCHHHHHHHHHHHHTTCCCCCSSBHHH
T ss_pred             EEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHhhhcc----ccccchhHHHHHHHHhCCccChhhcccHHH
Confidence            999999999999999 88999998874 888772221  1100000    0125666 88888 8888877554     3


Q ss_pred             H--HcCccceecCCCC
Q 021410          161 M--ACGLATHYSVSEK  174 (312)
Q Consensus       161 ~--~~Glv~~vv~~~~  174 (312)
                      +  +.|++|.++++++
T Consensus       258 h~~~~GvvD~vv~~e~  273 (587)
T 1pix_A          258 HYTETGFMREVYASEE  273 (587)
T ss_dssp             HTTTSCCSCEEESSHH
T ss_pred             HHhhcCceeEecCCHH
Confidence            3  6999999998765

>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=97.93  E-value=0.0003  Score=61.85  Aligned_cols=138  Identities=9%  Similarity=0.082  Sum_probs=88.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-+++......+.++++.+.+.. +-+|.|.-.|+     +-..+   .     ...+.++ ......+..+....+|.
T Consensus       133 ~gGs~g~~~~~K~~r~ie~A~~~~-lPlI~l~dsgG-----ar~qE---G-----i~sl~q~-aki~~~l~~~s~~~vP~  197 (285)
T 2f9i_B          133 RMGSMGSVIGEKICRIIDYCTENR-LPFILFSASGG-----ARMQE---G-----IISLMQM-GKTSVSLKRHSDAGLLY  197 (285)
T ss_dssp             GGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEECS-----CCGGG---H-----HHHHHHH-HHHHHHHHHHHHTTCCE
T ss_pred             ccCcCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC-----cchhh---h-----hhhHhHH-HHHHHHHHHHHcCCCCE
Confidence            346789999999999999888764 66777776443     32221   0     1111111 23334556677789999


Q ss_pred             EEEEccceeccccee-ecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHHHHcCccc
Q 021410           89 VAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT  167 (312)
Q Consensus        89 Iaav~G~a~GgG~~l-al~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA~~~Glv~  167 (312)
                      |+.|-|+|.||+... ++.+|+++|.+++.+++--.       -+....+-+-+.   .      .--+|+.+.+.|+||
T Consensus       198 Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP-------~vi~~~~~~~~~---e------~~~~Ae~~~~~G~iD  261 (285)
T 2f9i_B          198 ISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGR-------RVIEQTINEKLP---D------DFQTAEFLLEHGQLD  261 (285)
T ss_dssp             EEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCH-------HHHHHHHTSCCC---T------TTTBHHHHHHTTCCS
T ss_pred             EEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCH-------HHHHHHhcccch---H------hHhhHHHHHhcCCcc
Confidence            999999999998554 88999999988877665221       111111111111   0      111467778999999


Q ss_pred             eecCCCChhH
Q 021410          168 HYSVSEKLPL  177 (312)
Q Consensus       168 ~vv~~~~l~~  177 (312)
                      .|++++++.+
T Consensus       262 ~Iv~~~e~r~  271 (285)
T 2f9i_B          262 KVVHRNDMRQ  271 (285)
T ss_dssp             EECCGGGHHH
T ss_pred             EEeChHHHHH
Confidence            9999876543

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=97.90  E-value=0.00063  Score=64.49  Aligned_cols=189  Identities=11%  Similarity=0.060  Sum_probs=129.5

Q ss_pred             CHHHHHHHHHHHHHhh-cCCCceEEEEEeCCCceeccCCchhHHHh---h-ccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410           14 NTNMGAKLNKLFKAWE-NDPNIGFVSMKGSGRAFCAGGDIVSLYHF---M-NQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus        14 ~~~~~~~L~~~l~~~~-~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      -..|..||.+++-.+. +++++...++...|+.       ..+...   . ...+.=...+...-+.+.+.++--...-+
T Consensus       306 ~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~d~~~~~~  378 (556)
T 2w3p_A          306 PLKFAREFDDAILSMRTNELAVGTWVFRTEGDA-------RHLLAADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSL  378 (556)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH-------HHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred             hhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH-------HHHhhhHHHHHhccchHHHHHHHHHHHHHHHHhcccchhh
Confidence            3568889977776554 5677888888877643       333211   0 01111112233334456667777778888


Q ss_pred             EEEE-ccceecc-cceeecCCCeEEEeC-------ceeEecCCCcccccCCCchHHHhhhc-ChHH-HH--HHHhcCCCC
Q 021410           89 VAIL-NGVTMGG-GAGVSIPGTFRVACG-------KTVFATPETLIGFHPDAGASFYLSHL-PGHL-GE--FLALTGAKL  155 (312)
Q Consensus        89 Iaav-~G~a~Gg-G~~lal~~D~~ia~~-------~a~f~~pe~~~G~~p~~g~~~~l~r~-~g~~-a~--~l~ltg~~i  155 (312)
                      +|.| .|.|+.| =++|+++||..++-+       .+.+.+.+.++|.+|-.-+..+|.+. .|.. ..  --...|+++
T Consensus       379 ~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  458 (556)
T 2w3p_A          379 FALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAI  458 (556)
T ss_dssp             EEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCCEECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCB
T ss_pred             eeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCceeEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCC
Confidence            9988 6889766 478999999999953       47899999999999987666566554 3433 22  223569999


Q ss_pred             CHHHHHHcCccceecCCCChhHH-HHHHhhhhcCCHHHHHHHHHHhccccCCCcc
Q 021410          156 NGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKN  209 (312)
Q Consensus       156 ~a~eA~~~Glv~~vv~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (312)
                      ++++|.++|||+...++=+.++. .-.+.+.++.+|.++-..-..++...+....
T Consensus       459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (556)
T 2w3p_A          459 KPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEANLRFNGPETME  513 (556)
T ss_dssp             CHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHSSCSCCCHH
T ss_pred             CHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcchhccchhhcccCCchhhh
Confidence            99999999999998877666543 4445888999999998766666655554433

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=97.81  E-value=0.00027  Score=67.30  Aligned_cols=137  Identities=18%  Similarity=0.167  Sum_probs=91.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++......+.++++.+.++ .+-+|.|.-+     .|+.+.+-        ...+..+.+.++.. ..+.. .+|+
T Consensus       109 ~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dS-----gGaRmqEg--------~~~l~~~~~i~~~~-~~~s~-~iP~  172 (530)
T 3iav_A          109 FGGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQEG--------VASLGAYGEIFRRN-THASG-VIPQ  172 (530)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGGT--------HHHHHHHHHHHHHH-HHTTT-TSCE
T ss_pred             ceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcC-----CCcchhhh--------hhhHHHHHHHHHHH-HHHcC-CCCE
Confidence            45678888899999999988876 4667777664     44444321        12222232222222 22222 4999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------  160 (312)
                      |+.|.|+|.|||......||++|++++ +.+++.                    |+...+. .+|+.+++++.       
T Consensus       173 Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~~-~~ge~v~~e~LGGa~~h~  231 (530)
T 3iav_A          173 ISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIKT-VTGEDVGFEELGGARTHN  231 (530)
T ss_dssp             EEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH-HHCCCCCHHHHHBHHHHH
T ss_pred             EEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHHH-HhCCcCChhhcchHHHHH
Confidence            999999999999998889999999885 777663                    4332222 57888888775       


Q ss_pred             HHcCccceecCCCC-hhHHHHHH
Q 021410          161 MACGLATHYSVSEK-LPLIEEEL  182 (312)
Q Consensus       161 ~~~Glv~~vv~~~~-l~~~~~~~  182 (312)
                      ...|++|.++++++ .....+.+
T Consensus       232 ~~sGv~d~va~de~~a~~~~r~~  254 (530)
T 3iav_A          232 STSGVAHHMAGDEKDAVEYVKQL  254 (530)
T ss_dssp             HTSCCCSEEESSHHHHHHHHHHH
T ss_pred             hccCceeEEecChHHHHHHHHHH
Confidence            58999999998753 33333333

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=97.69  E-value=0.00038  Score=66.23  Aligned_cols=129  Identities=12%  Similarity=0.145  Sum_probs=88.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-++.......+.++++.+.+.. +-+|.|.-+     .|+.+.+-        ...+..+.+.+.... .+ .-.+|+
T Consensus       117 ~gGS~g~~~~~Ki~ra~e~A~~~~-lPvI~l~dS-----GGARmqeg--------~~sl~~~~~i~~~~~-~~-s~~iP~  180 (531)
T 3n6r_B          117 LGGSVSETHSKKICKIMDMAMQNG-APVIGINDS-----GGARIQEG--------VDSLAGYGEVFQRNI-MA-SGVVPQ  180 (531)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECC-----CCBCGGGT--------HHHHHHHHHHHHHHH-HT-TTTSCE
T ss_pred             ccccccHHHHHHHHHHHHHHHHcC-CCEEEEeCC-----CccccCcc--------cchhhhHHHHHHHHH-HH-hCCCCE
Confidence            456788888999999999887653 566777663     55555431        112222222222222 12 245999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------  160 (312)
                      |+.|.|+|.|||......||++|+.++ +.+++                    -|+...+- .+|+.+++++.       
T Consensus       181 Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~~-~~ge~v~~E~LGGa~~h~  239 (531)
T 3n6r_B          181 ISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVKT-VTNEQVSAEELGGATTHT  239 (531)
T ss_dssp             EEEECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH-HHCCCCCHHHHHBHHHHH
T ss_pred             EEEEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHHH-HhCCccChhhcchHHHHh
Confidence            999999999999988888999999985 66544                    23332222 57899999998       


Q ss_pred             HHcCccceecCCCC
Q 021410          161 MACGLATHYSVSEK  174 (312)
Q Consensus       161 ~~~Glv~~vv~~~~  174 (312)
                      .+.|++|.++++++
T Consensus       240 ~~sG~~d~v~~~e~  253 (531)
T 3n6r_B          240 RKSSVADAAFENDV  253 (531)
T ss_dssp             HTTSCCSEEESSHH
T ss_pred             hccCcceEEeCCHH
Confidence            88999999998754

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=97.65  E-value=0.00054  Score=65.29  Aligned_cols=128  Identities=14%  Similarity=0.163  Sum_probs=87.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-++.......+.++++.+.++ .+-+|.|.-     |.|+.+.+-.        ..+.++.+.+.... .+ .-.+|.
T Consensus       107 ~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~--------~sl~~~~~i~~~~~-~~-s~~iP~  170 (523)
T 1on3_A          107 MGGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGI--------DSLSGYGKMFFANV-KL-SGVVPQ  170 (523)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTH--------HHHHHHHHHHHHHH-HH-TTTSCE
T ss_pred             cCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHH--------HHHHHHHHHHHHHH-Hh-cCCCCE
Confidence            45678888888999999888775 466777776     5666665421        12223333222322 22 345999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHH-----HHH--
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-----EMM--  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~-----eA~--  161 (312)
                      |+.+.|+|.||+......||++|+.+++.+++.                    |+...+- .+|+.++.+     |.+  
T Consensus       171 Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~-~~ge~~~~e~lggae~h~~  229 (523)
T 1on3_A          171 IAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS-VTGEDVTADELGGAEAHMA  229 (523)
T ss_dssp             EEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH-HHCCCCCHHHHHSHHHHHH
T ss_pred             EEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH-HhCCcCChHhcccHHHHhh
Confidence            999999999999999999999999998877665                    3332221 457777753     333  


Q ss_pred             HcCccceecCCC
Q 021410          162 ACGLATHYSVSE  173 (312)
Q Consensus       162 ~~Glv~~vv~~~  173 (312)
                      +.|++|.+++++
T Consensus       230 ~~G~vd~vv~d~  241 (523)
T 1on3_A          230 ISGNIHFVAEDD  241 (523)
T ss_dssp             TTCCCSEEESSH
T ss_pred             ccCceEEEeCCH
Confidence            699999999864

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=97.54  E-value=0.001  Score=63.48  Aligned_cols=128  Identities=13%  Similarity=0.127  Sum_probs=86.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-++.......+.++++.+.++ .+-+|.|..     |.|+.+.+-.        ..+.++.+.+.... .+ .-.+|.
T Consensus       103 ~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~--------~sl~~~~~i~~~~~-~~-s~~iP~  166 (522)
T 1x0u_A          103 LGGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGA--------LSLEGYGAVFKMNV-MA-SGVIPQ  166 (522)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTH--------HHHHHHHHHHHHHH-HH-TTTSCE
T ss_pred             eCccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHH--------HHHHHHHHHHHHHH-Hh-CCCCcE
Confidence            44578888888999999888775 466787776     5666665321        12223333222322 22 345999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-e-eEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHH-----HHH
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-T-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-----EMM  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a-~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~-----eA~  161 (312)
                      |+.+.|+|.||+......||++|+.++ + .+++                    -|+...+- .+|+.++.+     +.+
T Consensus       167 Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~--------------------aGP~vI~~-~~ge~~~~e~lggae~~  225 (522)
T 1x0u_A          167 ITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFV--------------------TGPEITKV-VLGEEVSFQDLGGAVVH  225 (522)
T ss_dssp             EEEECSEEEGGGGHHHHHSSEEEEECSTTCEEES--------------------SCHHHHHH-TTCCCCCHHHHHBHHHH
T ss_pred             EEEEcCCCchHHHHHHhcCCeEEEecCCccEEEe--------------------cCHHHHHH-HhCCcCChhhcchHHHH
Confidence            999999999999999999999999987 6 5555                    13331221 467777753     333


Q ss_pred             --HcCccceecCCC
Q 021410          162 --ACGLATHYSVSE  173 (312)
Q Consensus       162 --~~Glv~~vv~~~  173 (312)
                        +.|++|.+++++
T Consensus       226 ~~~~G~~d~vv~~~  239 (522)
T 1x0u_A          226 ATKSGVVHFMVDSE  239 (522)
T ss_dssp             HHTTCCCSEEESCH
T ss_pred             hhcCceeEEEeCCH
Confidence              699999999864

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=97.52  E-value=0.00098  Score=63.79  Aligned_cols=128  Identities=16%  Similarity=0.152  Sum_probs=86.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-+++......+.++++.+.++ .+-+|.|.-     |.|+.+.+-.        ..+.++.+.++... .+ .-.+|.
T Consensus       120 ~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~--------~sl~~~~~i~~~~~-~~-s~~iP~  183 (548)
T 2bzr_A          120 FGGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGV--------VSLGLYSRIFRNNI-LA-SGVIPQ  183 (548)
T ss_dssp             GGGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTT--------HHHHHHHHHHHHHH-HT-TTTSCE
T ss_pred             ccCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHH--------HHHHHHHHHHHHHH-Hh-cCCCcE
Confidence            45678888899999999988875 466777776     5566665321        12223333222222 22 345999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHH-----HHH-
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-----EMM-  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~-----eA~-  161 (312)
                      |+.|.|+|.||+......||++|+.++ +.+++.                    |+...+- .+|+.++.+     +.+ 
T Consensus       184 Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~-~~ge~v~~e~lggae~h~  242 (548)
T 2bzr_A          184 ISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT-VTGEEVTMEELGGAHTHM  242 (548)
T ss_dssp             EEEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH-HHCCCCCHHHHHBHHHHH
T ss_pred             EEEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH-HhCCcCChHhcccHHHHh
Confidence            999999999999998889999999986 776654                    3332221 467777764     333 


Q ss_pred             -HcCccceecCCC
Q 021410          162 -ACGLATHYSVSE  173 (312)
Q Consensus       162 -~~Glv~~vv~~~  173 (312)
                       +.|++|.+++++
T Consensus       243 ~~sG~~d~vv~d~  255 (548)
T 2bzr_A          243 AKSGTAHYAASGE  255 (548)
T ss_dssp             HTSSCCSEEESSH
T ss_pred             hccCceeEEeCCH
Confidence             699999999854

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=97.23  E-value=0.0016  Score=62.24  Aligned_cols=133  Identities=18%  Similarity=0.160  Sum_probs=87.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-++++.....+.++++.+.+. .+-+|.|.-+|++.     +.+-......  ..   .+ ..+..-...+....+|+
T Consensus       133 ~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgGAR-----l~~q~~~~~~--~~---~~-~~i~~~~~~ls~~giP~  200 (555)
T 3u9r_B          133 KGGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGGAN-----LPRQDEVFPD--RE---HF-GRIFFNQANMSARGIPQ  200 (555)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCCBC-----GGGGGGTSSS--TT---ST-THHHHHHHHHHHTTCCE
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCCCC-----CCCcceeecc--cc---cH-HHHHHHHHHHhcCCCCE
Confidence            45678888899999999988876 35677776644433     3210000000  00   00 11112233455678999


Q ss_pred             EEEEccceecccceeecCCCeEEEeC-ceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------  160 (312)
                      |+.|.|.|.|||......||++|+.+ ++.       +++             -|+...+ ..+|+.+++++.       
T Consensus       201 Isvv~G~~~GGga~~~a~~d~vim~e~~a~-------i~~-------------aGP~vik-~~~ge~~~~e~LGGa~~h~  259 (555)
T 3u9r_B          201 IAVVMGSCTAGGAYVPAMSDETVMVREQAT-------IFL-------------AGPPLVK-AATGEVVSAEELGGADVHC  259 (555)
T ss_dssp             EEEECSCCBGGGGHHHHTSSEEEEETTTCB-------CBS-------------SCHHHHH-HHHCCCCCHHHHHBHHHHH
T ss_pred             EEEEecCCCccHHHHHHhCCceEEecCCce-------EEE-------------ccHHHHH-HHhcCccChhhccchhhhh
Confidence            99999999999999999999998877 343       332             1333222 258899999988       


Q ss_pred             HHcCccceecCCCC
Q 021410          161 MACGLATHYSVSEK  174 (312)
Q Consensus       161 ~~~Glv~~vv~~~~  174 (312)
                      ...|++|.++++++
T Consensus       260 ~~sGv~d~v~~de~  273 (555)
T 3u9r_B          260 KVSGVADHYAEDDD  273 (555)
T ss_dssp             HTTCSCSEEESSHH
T ss_pred             hccCceeEEeCCHH
Confidence            78999999998765

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=97.22  E-value=0.0034  Score=59.88  Aligned_cols=128  Identities=16%  Similarity=0.169  Sum_probs=84.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-++.......+.++++.+.+.. +-+|.|.-+     .|+.+.+-.        .....+.+.+....  .....+|+
T Consensus       110 ~gGS~g~~~~~Ki~r~~e~A~~~~-lPvI~l~dS-----gGAR~qeg~--------~~l~g~~~~~~~~~--~~s~~iP~  173 (527)
T 1vrg_A          110 MGGSLGEMHAKKIVKLLDLALKMG-IPVIGINDS-----GGARIQEGV--------DALAGYGEIFLRNT--LASGVVPQ  173 (527)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEEE-----CSBCGGGTH--------HHHHHHHHHHHHHH--HHTTTSCE
T ss_pred             cCccccHHHHHHHHHHHHHHHHcC-CCEEEEECC-----CCCCccchh--------HHHHHHHHHHHHHH--HhCCCCCE
Confidence            456788889999999999887653 556666663     455444211        11122323233332  22456999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHH-----HHH-
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-----EMM-  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~-----eA~-  161 (312)
                      |+.|.|+|.|||......||++|+.++ +.+++                    .|+...+. .+|+.++.+     +.+ 
T Consensus       174 Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi~~-~~ge~v~~e~lggae~~~  232 (527)
T 1vrg_A          174 ITVIAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVIKA-VTGEEISQEDLGGAMVHN  232 (527)
T ss_dssp             EEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH-HHCCCCCHHHHHBHHHHH
T ss_pred             EEEEeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHHHH-HhCCCCCccccccHHHHh
Confidence            999999999999998889999999987 65332                    23332222 467777653     333 


Q ss_pred             -HcCccceecCCC
Q 021410          162 -ACGLATHYSVSE  173 (312)
Q Consensus       162 -~~Glv~~vv~~~  173 (312)
                       +.|++|.+++++
T Consensus       233 ~~~G~vd~vv~d~  245 (527)
T 1vrg_A          233 QKSGNAHFLADND  245 (527)
T ss_dssp             HTSCCCSEEESSH
T ss_pred             hcccceEEEecCH
Confidence             699999999864

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=96.96  E-value=0.0021  Score=61.22  Aligned_cols=145  Identities=14%  Similarity=0.069  Sum_probs=90.5

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      -+++++......+.++.+.+. .+-+|.|.-.     .|..+..-.         +.......+-+++..+....+|.|+
T Consensus       339 G~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds-----~G~~~G~~~---------E~~G~~~~~Ak~l~~~~~~~vP~Is  403 (522)
T 1x0u_A          339 GSIDIDAADKAARFIRFCDAF-NIPLISLVDT-----PGYVPGTDQ---------EYKGIIRHGAKMLYAFAEATVPKIT  403 (522)
T ss_dssp             GCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-----CCBCCSHHH---------HHTTHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CCcCHHHHHHHHHHHHHHhhC-CCCEEEEecC-----CCCCCchHH---------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            579999999999999988764 4667777663     344432111         1111223445567778889999999


Q ss_pred             EEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-ChH-----H-HHHHH--hcCCCCCH
Q 021410           91 ILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-PGH-----L-GEFLA--LTGAKLNG  157 (312)
Q Consensus        91 av~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~g~-----~-a~~l~--ltg~~i~a  157 (312)
                      .|-|.|.|||+....    .+|+++|.+++.+++       ..+-|++..+-+. +-.     . ..++.  +.-..-++
T Consensus       404 vi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v-------~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~~  476 (522)
T 1x0u_A          404 VIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAV-------TGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANP  476 (522)
T ss_dssp             EEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSS
T ss_pred             EEeCCcccHHHHHhcccccCCCEEEEeCCCEEEe-------cCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCCH
Confidence            999999999764443    499999888776654       3223333323222 110     0 01111  01112366


Q ss_pred             HHHHHcCccceecCCCChhH
Q 021410          158 AEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~  177 (312)
                      ..+.+.|+||.|+++.++..
T Consensus       477 ~~~~~~G~iD~II~p~~tR~  496 (522)
T 1x0u_A          477 YWAAEKGLVDDVIEPKDTRR  496 (522)
T ss_dssp             HHHHHTTSSSEECCGGGHHH
T ss_pred             HHHHhcCCCcEeECHHHHHH
Confidence            78999999999999876543

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=96.34  E-value=0.013  Score=56.27  Aligned_cols=151  Identities=13%  Similarity=-0.007  Sum_probs=88.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-++++.....+.++++.+.+.. +-+|.|.-+|+     +.+.+-.....  ..   ..+.+ +..-...+....+|+
T Consensus       118 ~gGS~g~~~~~Ki~Ra~e~A~~~~-lPvI~l~dSgG-----Arl~~qe~~~~--~l---~~~g~-if~~~~~ls~~~iP~  185 (588)
T 3gf3_A          118 MAGAWVPGQAENLIRCSDAAKMMH-LPLIYLLNCSG-----VEFPNQDKVYP--NR---RGGGT-PFFRNSELNQLGIPV  185 (588)
T ss_dssp             GGGCBCTTHHHHHHHHHHHHHHHT-CCEEEEECCCC-----BCGGGHHHHSS--ST---TSTTH-HHHHHHHHHHTTCCE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEcCCC-----cCccccccccc--ch---hhHHH-HHHHHHHHhcCCCCE
Confidence            455678888889999998887653 56777766544     44421000000  00   00111 112223455678999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcc--cccCCCchHHHhhhc---ChHH-HHHHHhcCCCCCHHHHH-
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI--GFHPDAGASFYLSHL---PGHL-GEFLALTGAKLNGAEMM-  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~--G~~p~~g~~~~l~r~---~g~~-a~~l~ltg~~i~a~eA~-  161 (312)
                      |+.|-|.|.|||...++++|++++.+++.+++.-..+  |+-|.+  . +.+.-   +... ..+-..+.+.+.+.+.+ 
T Consensus       186 Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g--~-~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~  262 (588)
T 3gf3_A          186 IVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG--Y-IDDEAAEQIIAAQIENSKLKVPAPGSVPIHY  262 (588)
T ss_dssp             EEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHT
T ss_pred             EEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc--c-ccccchhhhhhhhccccccChhhccchhhhc
Confidence            9999999999988668888999989888887754331  211111  0 01111   1112 22222477788888888 


Q ss_pred             -HcCccceecCCCC
Q 021410          162 -ACGLATHYSVSEK  174 (312)
Q Consensus       162 -~~Glv~~vv~~~~  174 (312)
                       ..|++|.++++++
T Consensus       263 ~~sGv~d~~a~de~  276 (588)
T 3gf3_A          263 DETGFFREVYQNDL  276 (588)
T ss_dssp             TTSCCSCEEESSHH
T ss_pred             cccccceEEeCCHH
Confidence             5999999998654

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=96.16  E-value=0.034  Score=52.99  Aligned_cols=144  Identities=12%  Similarity=0.092  Sum_probs=88.4

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      .+++++-.....+.++.+++ ..+-+|.|.=.+ .|..|.+-             +........-+++..+....+|+|+
T Consensus       344 G~~~~~~~~Kaar~i~~a~~-~~~Plv~lvDtp-G~~~G~~~-------------E~~g~~~~~A~~~~a~~~~~vP~is  408 (527)
T 1vrg_A          344 GVLDIDSSDKAARFIRFLDA-FNIPILTFVDTP-GYLPGVAQ-------------EHGGIIRHGAKLLYAYSEATVPKIT  408 (527)
T ss_dssp             GCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEEC-CBCCCHHH-------------HHTTHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhh-cCCCeEEEecCC-CCcCchhh-------------HHhHHHHHHHHHHHHHhcCCCCEEE
Confidence            46899999999999988865 345566554422 23333221             1112234445677778889999999


Q ss_pred             EEccceecccceeecC----CCeEEEeCceeEecCCCcccccCCCchHHHhhhcC-----hHH-H-HHHH--hcCCCCCH
Q 021410           91 ILNGVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-----GHL-G-EFLA--LTGAKLNG  157 (312)
Q Consensus        91 av~G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-----g~~-a-~~l~--ltg~~i~a  157 (312)
                      .|-|.|.|||+.-...    +|+++|.+++++       ++.++-|++..+.+.-     ... . .++.  +.-..-++
T Consensus       409 vI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~-------~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p  481 (527)
T 1vrg_A          409 VILRKAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANP  481 (527)
T ss_dssp             EEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSH
T ss_pred             EEeCCcccHHHHHhcCCCCCCCEEEEcCCCeE-------EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCH
Confidence            9999998887643333    788766655554       5554444444343321     111 1 1121  11123577


Q ss_pred             HHHHHcCccceecCCCChh
Q 021410          158 AEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~  176 (312)
                      ..+.+.|+||.|+++.+..
T Consensus       482 ~~~~~~g~iD~II~p~~tR  500 (527)
T 1vrg_A          482 YIAASRGYVDMVIDPRETR  500 (527)
T ss_dssp             HHHHHTTSSSEECCGGGHH
T ss_pred             HHHHHcCCCCeeeCHHHHH
Confidence            8899999999999986654

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=96.03  E-value=0.033  Score=53.02  Aligned_cols=150  Identities=15%  Similarity=0.075  Sum_probs=92.1

Q ss_pred             cCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhh
Q 021410            5 NRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT   83 (312)
Q Consensus         5 n~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   83 (312)
                      |+|. ...+++++-.....+.++.+++. ++-+|.|.=. ..|..|.+-.             .....+..-+++..+.+
T Consensus       333 n~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDt-pGf~~G~~~E-------------~~Gi~~~~A~~l~a~a~  397 (523)
T 1on3_A          333 NQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQE-------------YGGIIRHGAKMLYAYSE  397 (523)
T ss_dssp             ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHHHHHH
T ss_pred             ecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeC-CCcCcchHHH-------------HhhHHHHHHHHHHHHhc
Confidence            4443 22468999999999999888653 4555555443 2344443221             12234445677778889


Q ss_pred             CCCcEEEEEccceecccceeecC----CCeEEEeCceeEecCCCcccccCCCchHHHhhhcC-h----HH-H-HHHH--h
Q 021410           84 HLKPHVAILNGVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-G----HL-G-EFLA--L  150 (312)
Q Consensus        84 ~~kp~Iaav~G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-g----~~-a-~~l~--l  150 (312)
                      ..+|+|+.|-|.+.|||+.-...    +|+++|.+++       .+++.++-|++..+.+.- .    .. . .++.  +
T Consensus       398 ~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a-------~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y  470 (523)
T 1on3_A          398 ATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSA-------EIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEY  470 (523)
T ss_dssp             CCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTC-------EEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHH
T ss_pred             CCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCC-------eEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHH
Confidence            99999999999999888654444    7776665555       455554444444443321 1    11 1 1121  1


Q ss_pred             cCCCCCHHHHHHcCccceecCCCChh
Q 021410          151 TGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       151 tg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      .-..-++..+.+.|+||.|+++.+..
T Consensus       471 ~~~~~~p~~~a~~g~iD~II~p~~tR  496 (523)
T 1on3_A          471 QNAFNTPYVAAARGQVDDVIDPADTR  496 (523)
T ss_dssp             HHHHSSHHHHHHTTSSSEECCGGGHH
T ss_pred             HHhhCCHHHHHhcCCCCEeeCHHHHH
Confidence            11124668899999999999986654

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=95.63  E-value=0.15  Score=49.12  Aligned_cols=144  Identities=15%  Similarity=0.095  Sum_probs=93.2

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      ...++++-.....+.++.++. .++-+|.|.=. ..|..|.+-             +.....+...+++..+..+.+|+|
T Consensus       384 ~G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~-------------E~~Gi~~~gA~~~~a~a~a~vP~i  448 (587)
T 1pix_A          384 GGKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDA-------------EKAELLGLGQSLIYSIQTSHIPQF  448 (587)
T ss_dssp             TTEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHH-------------HHTTHHHHHHHHHHHHHTCCCCEE
T ss_pred             CCCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHH-------------HHHHHHHHHHHHHHHHHhCCCCEE
Confidence            456899999999999987765 45666666543 335544322             222344566678888999999999


Q ss_pred             EEEccceecccceeecC-----C--CeEEEeCceeEecCCCcccccCCCchHHHhhhcChH-----------H-H--HHH
Q 021410           90 AILNGVTMGGGAGVSIP-----G--TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-----------L-G--EFL  148 (312)
Q Consensus        90 aav~G~a~GgG~~lal~-----~--D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~-----------~-a--~~l  148 (312)
                      +.|-|.+.|||. ++++     +  |+++|.++++++       +.++-|++..+.+.--.           . +  .++
T Consensus       449 tvI~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~  520 (587)
T 1pix_A          449 EITLRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNL  520 (587)
T ss_dssp             EEECSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred             EEEcCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHH
Confidence            999999988874 4444     4  887766666554       54444444333322100           0 0  001


Q ss_pred             H--hcCCCCCHHHHHHcCccceecCCCChhH
Q 021410          149 A--LTGAKLNGAEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       149 ~--ltg~~i~a~eA~~~Glv~~vv~~~~l~~  177 (312)
                      .  +. +..++..|.+.|+||.|+++.+...
T Consensus       521 ~~~y~-~~~~p~~aa~~g~iD~VI~p~~tR~  550 (587)
T 1pix_A          521 IQAFY-TKSRPKVCAELGLVDEIVDMNKIRG  550 (587)
T ss_dssp             HHHHH-HTTSHHHHHHHTSSSEECCTTTHHH
T ss_pred             HHHHH-HhCCHHHHHhcCCCccccCHHHHHH
Confidence            0  11 1478999999999999999887653

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=95.61  E-value=0.073  Score=50.61  Aligned_cols=149  Identities=15%  Similarity=0.148  Sum_probs=92.8

Q ss_pred             ecCCCC-CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPSA-LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~~-~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      =|+|.. ..+++++-.....+.++.+++. ++-+|.|.=.. .|..|.+-             +.....+..-+++..+.
T Consensus       344 an~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~-------------E~~Gi~~~gAk~l~a~a  408 (531)
T 3n6r_B          344 ANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQ-------------EYGGVIKHGAKLLYAYG  408 (531)
T ss_dssp             EECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHH-------------HHTTHHHHHHHHHHHHH
T ss_pred             EecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHH-------------HHhhHHHHHHHHHHHHH
Confidence            355542 2468999999999999877754 46666665432 23333221             22233455667888899


Q ss_pred             hCCCcEEEEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-Ch----HH--HHHHHhc
Q 021410           83 THLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-PG----HL--GEFLALT  151 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~g----~~--a~~l~lt  151 (312)
                      +..+|+|+.|-|.+.|||..-..    .+|+++|.+++++       ++.++-|++..+.+. +.    ..  ..+  +.
T Consensus       409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i-------~Vm~pegaa~Il~r~~~~~~~~~~~~~~~--y~  479 (531)
T 3n6r_B          409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEV-------AVMGAKGATEIIHRGDLGDPEKIAQHTAD--YE  479 (531)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHCCTTTTSTTHHHHHHHH--HH
T ss_pred             hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceE-------ecCCHHHHHHHHhcccccchhHHHHHHHH--HH
Confidence            99999999999999988864333    2888877666555       444444444333321 11    11  111  11


Q ss_pred             CCCCCHHHHHHcCccceecCCCChh
Q 021410          152 GAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      -+.-++..|.+.|++|.|+++.+..
T Consensus       480 ~~~~~p~~aa~~~~vD~vIdP~~TR  504 (531)
T 3n6r_B          480 ERFANPFVASERGFVDEVIQPRSTR  504 (531)
T ss_dssp             HHHSSSHHHHHHTSSSEECCGGGHH
T ss_pred             HHhcCHHHHHhcCccCcccCHHHHH
Confidence            1224566788999999999988754

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=94.92  E-value=0.13  Score=49.13  Aligned_cols=144  Identities=15%  Similarity=0.152  Sum_probs=88.6

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      -+++++-.....+.++.+++. ++-+|.|.=. ..|..|.+-.             .....+..-+++..+.+..+|+|+
T Consensus       361 G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E-------------~~Gi~~~ga~~l~a~~~~~VP~is  425 (548)
T 2bzr_A          361 GCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQE-------------YNGIIRRGAKLLYAYGEATVPKIT  425 (548)
T ss_dssp             GCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHH-------------HhhHHHHHHHHHHHHhCCCCCEEE
Confidence            468999999999999888754 4555655443 2244443322             112234455677778889999999


Q ss_pred             EEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhcC-hH------H-H---HHHHh--cCC
Q 021410           91 ILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-GH------L-G---EFLAL--TGA  153 (312)
Q Consensus        91 av~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~-g~------~-a---~~l~l--tg~  153 (312)
                      .|-|.|.|||+.-..    .+|+++|.+++++       ++.++-|++..+.+.- ..      . +   .++.-  .-.
T Consensus       426 vI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i-------~Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~~~  498 (548)
T 2bzr_A          426 VITRKAYGGAYCVMGSKDMGCDVNLAWPTAQI-------AVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDT  498 (548)
T ss_dssp             EEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHH
T ss_pred             EEeCCcchHHHHHhccccCCCCEEEEcCCCEE-------EecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHHHh
Confidence            999999988765432    3888777766555       4444444444443321 00      1 1   11111  111


Q ss_pred             CCCHHHHHHcCccceecCCCChh
Q 021410          154 KLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       154 ~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      .-++..+.+.|+||.|+++.+..
T Consensus       499 ~~~p~~~a~~g~iD~II~p~~tR  521 (548)
T 2bzr_A          499 LVNPYVAAERGYVGAVIPPSHTR  521 (548)
T ss_dssp             HSBSHHHHHTTSSSEECCGGGHH
T ss_pred             hCCHHHHHhcCCCceeeCHHHHH
Confidence            23557799999999999987654

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=94.38  E-value=0.38  Score=45.92  Aligned_cols=144  Identities=11%  Similarity=0.003  Sum_probs=88.0

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      .+++++-.....+.++.+++. ++-+|.|.-.++ |..|.+-             +.....+..-+++..+....+|+|+
T Consensus       366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~-------------E~~Gi~~~gAk~~~a~~~a~vP~it  430 (555)
T 3u9r_B          366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNITG-FMVGQKY-------------EAGGIAKHGAKLVTAVACARVPKFT  430 (555)
T ss_dssp             SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEECC-BCCSHHH-------------HHTTHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CccCHHHHHHHHHHHHHHhcC-CCCEEEEecCcC-CCCCHHH-------------HHHHHHHHHHHHHHHHHhCCCCEEE
Confidence            568889898988888887753 466677665432 4444322             1122344566788889999999999


Q ss_pred             EEccceecccceee----cCCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-------Ch----H--H-HH--HHH-
Q 021410           91 ILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-------PG----H--L-GE--FLA-  149 (312)
Q Consensus        91 av~G~a~GgG~~la----l~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-------~g----~--~-a~--~l~-  149 (312)
                      .|-|.+.|||..-.    +.+|+++|.++++++       +..+-|++..+...       .|    .  . +.  ++. 
T Consensus       431 vi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~-------Vmgpegaa~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  503 (555)
T 3u9r_B          431 VLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIG-------VMGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILE  503 (555)
T ss_dssp             EEEEEEETTHHHHTTCGGGCCSEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             EEeCCccchhhHhhcCccCCCCeEEEcCCcEEE-------cCCHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHH
Confidence            99999988864332    247888876666655       44333444333210       00    0  0 00  000 


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCChh
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      .--+..++..|.+.|++|.|+++.+..
T Consensus       504 ~y~~~~~p~~aa~r~~vD~vIdP~~TR  530 (555)
T 3u9r_B          504 QYEHQGHPYYSSARLWDDGVIDPAQTR  530 (555)
T ss_dssp             HHHHHHSHHHHHHTTSSSCBCCGGGHH
T ss_pred             HHHHhCCHHHHhhccccCcccChHHHH
Confidence            001124677777899999999988754

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=93.95  E-value=0.2  Score=48.25  Aligned_cols=141  Identities=13%  Similarity=0.139  Sum_probs=90.3

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      .+++++-...-.+.++.+++- ++-+|.|.=. ..|..|.+-.             .....+...+++..+.++.+|.|+
T Consensus       387 G~l~~~~a~Kaarfi~lcd~f-~iPlv~lvDt-pGf~~G~~aE-------------~~Gi~~~gAk~l~a~a~a~VP~it  451 (588)
T 3gf3_A          387 GKLYRQGLIKMNEFVTLCARD-RIPLIWLQDT-TGIDVGDEAE-------------KAELLGLGQSLIYSIENSKLPSLE  451 (588)
T ss_dssp             TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHHHCSCEEE
T ss_pred             CCcCHHHHHHHHHHHHHhhhc-CCCeEEEecC-CCCCCCHHHH-------------HHHHHHHHHHHHHHHHhCCCCEEE
Confidence            468899999999999988764 4666666543 3455553322             123445566788889999999999


Q ss_pred             EEccceecccceeecCC-------CeEEEeCceeEecCCCcccccCCCchHHHhhhc-C------h-----------HHH
Q 021410           91 ILNGVTMGGGAGVSIPG-------TFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------G-----------HLG  145 (312)
Q Consensus        91 av~G~a~GgG~~lal~~-------D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~------g-----------~~a  145 (312)
                      .|-|.+.|||. +++++       |+++|.+       ...+++.++-|++..+.+. +      |           ...
T Consensus       452 vI~g~~~Ggg~-~am~~~~~~~~~~~~~awp-------~A~~sVm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (588)
T 3gf3_A          452 ITIRKASAAAH-YVLGGPQGNNTNVFSIGTG-------ACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMI  523 (588)
T ss_dssp             EESSEEETTHH-HHTTCTTCTTTEEEEEECT-------TCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHH
T ss_pred             EEcCCccHHHH-HHhcccccCCccceEEECC-------CceEEeCCHHHHHHHHhhhHHhhhhccccccchHHHHHHHHH
Confidence            99999988765 44443       2555554       4555555444444333321 1      1           001


Q ss_pred             HHHHhcCCCCCHHHHHHcCccceecCCCChhH
Q 021410          146 EFLALTGAKLNGAEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       146 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~  177 (312)
                      .++-   +..++.-|.+.|+||.|+++.+...
T Consensus       524 ~~y~---~~~~p~~aA~r~~vD~VIdP~~TR~  552 (588)
T 3gf3_A          524 QMYT---DKSRPKYCTEKGMVDEIVDMTEVRP  552 (588)
T ss_dssp             HHHH---HTTSHHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHH---HhCCHHHHHhcCCCCeeeCHHHHHH
Confidence            1111   1347888999999999999888654

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=93.13  E-value=0.43  Score=45.35  Aligned_cols=150  Identities=16%  Similarity=0.176  Sum_probs=94.4

Q ss_pred             ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      =|+|. ..-+++++-.....+.++.+++. ++-+|.|.=..+ |..|.+-.             .....+..-+++..+.
T Consensus       338 an~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~E-------------~~gi~~~~Ak~l~a~a  402 (530)
T 3iav_A          338 ANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVPG-FLPGVDQE-------------HDGIIRRGAKLIFAYA  402 (530)
T ss_dssp             EECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCCHHHH-------------HTTHHHHHHHHHHHHH
T ss_pred             EecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCCC-CCccHHHH-------------HhhHHHHHHHHHHHHH
Confidence            35554 22469999999999999887764 466666654432 55554321             1234566677888899


Q ss_pred             hCCCcEEEEEccceecccceeecC-----CCeEEEeCceeEecCCCcccccCCCchHHHhhhc-C-----hHH--HHHHH
Q 021410           83 THLKPHVAILNGVTMGGGAGVSIP-----GTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P-----GHL--GEFLA  149 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal~-----~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~-----g~~--a~~l~  149 (312)
                      +..+|+|+.|-|.+.|||. ++++     +|+++|.++++++       +.++-|++..+.+. +     ...  -.++.
T Consensus       403 ~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~-------Vm~~egaa~il~r~~~~~~~~d~~~~~~~~~  474 (530)
T 3iav_A          403 EATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAEATRARLI  474 (530)
T ss_dssp             HCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTSTTTSTTCTTCHHHHHHHH
T ss_pred             hCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEe-------cCCHHHHHHHHhhhhhhhcccCHHHHHHHHH
Confidence            9999999999999998765 4443     6888777666554       44434443333221 1     001  11111


Q ss_pred             --hcCCCCCHHHHHHcCccceecCCCChh
Q 021410          150 --LTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       150 --ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                        +.-+.-++..|.+.|+||.|+++.+..
T Consensus       475 ~~y~~~~~~p~~aa~~~~vD~VIdP~~TR  503 (530)
T 3iav_A          475 QEYEDALLNPYTAAERGYVDAVIMPSDTR  503 (530)
T ss_dssp             HHHHHHHSSSHHHHHTTSSSEECCGGGHH
T ss_pred             HHHHHhcCCHHHHHhcCCCCcccCHHHHH
Confidence              111123677888999999999988754

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=93.02  E-value=0.035  Score=54.59  Aligned_cols=35  Identities=14%  Similarity=0.069  Sum_probs=32.1

Q ss_pred             hCCCcEEEEEccceecccceeecCCCeEEEeCcee
Q 021410           83 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV  117 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~  117 (312)
                      ....|+|+.|.|+|.|||..+...||++|+.+++.
T Consensus       244 ~~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~  278 (758)
T 3k8x_A          244 YHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQP  278 (758)
T ss_dssp             HTTSCEEEEECSCEETHHHHHHHHTCEEEEETTCC
T ss_pred             hcCCCEEEEEccCCchHHHHHHhhCCEEEEECCce
Confidence            35789999999999999999999999999999864

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=91.35  E-value=0.071  Score=52.85  Aligned_cols=37  Identities=11%  Similarity=0.075  Sum_probs=33.5

Q ss_pred             CCCcEEEEEccceecccceeecCCCeEEEeCceeEec
Q 021410           84 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT  120 (312)
Q Consensus        84 ~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~  120 (312)
                      ..+|+|+.|.|.|.|||..++..||++|+.+++.+.+
T Consensus       258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~l  294 (793)
T 2x24_A          258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIIL  294 (793)
T ss_dssp             HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEES
T ss_pred             CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEe
Confidence            4699999999999999999999999999999876554

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=86.89  E-value=1.5  Score=43.17  Aligned_cols=107  Identities=14%  Similarity=0.171  Sum_probs=70.4

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      ..++++-.....+.++.+++-.++-+|.|.-. ..|..|.+-.             .....+...+++..+.++.+|+|+
T Consensus       447 G~l~pe~a~KaArfI~lcd~~f~iPLv~LvDt-pGf~~G~~aE-------------~~Gi~k~gAkll~A~a~a~VP~it  512 (758)
T 3k8x_A          447 QVWHPNSAFKTAQAINDFNNGEQLPMMILANW-RGFSGGQRDM-------------FNEVLKYGSFIVDALVDYKQPIII  512 (758)
T ss_dssp             TEECHHHHHHHHHHHHHHHHTSCCCEEECCCC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCEEEEecC-CCCCCCHHHH-------------HccHHHHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999887345666665433 4466664322             223445566788899999999999


Q ss_pred             EEc--cceecccceeecC----CCeEEEeCceeEecCCCcccccCCCchHHHh
Q 021410           91 ILN--GVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYL  137 (312)
Q Consensus        91 av~--G~a~GgG~~lal~----~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l  137 (312)
                      .|-  |.+.||++ +++.    +|+     .-.|..|...+|+.++-|++..+
T Consensus       513 VI~RkGe~~GGA~-~am~~~~~ad~-----~~v~Awp~A~isVM~pEgaa~Il  559 (758)
T 3k8x_A          513 YIPPTGELRGGSW-VVVDPTINADQ-----MEMYADVNARAGVLEPQGMVGIK  559 (758)
T ss_dssp             EECTTCEEETHHH-HTTCGGGSTTT-----EEEEEETTCEEESSCHHHHHHHH
T ss_pred             EEecCCccchHHH-HHhCcccCCCH-----HHHhcCCCCEEEccCHHHHHHHH
Confidence            998  99988766 5554    444     11444555555665555544433

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=84.31  E-value=4  Score=40.51  Aligned_cols=94  Identities=13%  Similarity=0.081  Sum_probs=62.5

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      ..++++-.....+.++.++. .++-+|.|.=. ..|..|.+-             +.....+...+++..+..+.+|+|+
T Consensus       462 G~l~~~~a~KaarfI~~cd~-f~iPlv~LvDt-pGf~~G~~a-------------E~~Gi~~~gAkll~A~a~a~VP~it  526 (793)
T 2x24_A          462 QVWFPDSAYKTAQAIKDFNR-EKLPLMIFANW-RGFSGGMKD-------------MYDQVLKFGAYIVDGLRKYRQPVLI  526 (793)
T ss_dssp             TEECHHHHHHHHHHHHHHHT-TTCCEEEECCB-CEECCSHHH-------------HHTTHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CcccHHHHHHHHHHHHHhcc-CCCCEEEEecC-CCCCCCHHH-------------HHhhHHHHHHHHHHHHHhcCCCEEE
Confidence            46999999999999999975 45666666443 345555332             2223455666788899999999999


Q ss_pred             EE--ccceecccceee---cCCCe--EEEeCceeEe
Q 021410           91 IL--NGVTMGGGAGVS---IPGTF--RVACGKTVFA  119 (312)
Q Consensus        91 av--~G~a~GgG~~la---l~~D~--~ia~~~a~f~  119 (312)
                      .|  .|.+.||++.+.   +..|+  ++|.++++++
T Consensus       527 vI~r~Ge~~GGa~~~~~~~~~~d~~ev~Awp~A~~~  562 (793)
T 2x24_A          527 YIPPYAEVRGGSWAVMDTSINPLCIEMYADRESRAS  562 (793)
T ss_dssp             EECTTCEEEHHHHHTTCGGGSTTTEEEEEETTCEEE
T ss_pred             EEecCCcccchhHHhhhcccCccHHHHhhhccCEEE
Confidence            99  898877654322   23454  4555444443

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=83.33  E-value=0.79  Score=39.50  Aligned_cols=92  Identities=13%  Similarity=-0.031  Sum_probs=54.6

Q ss_pred             hhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHH
Q 021410          138 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID  216 (312)
Q Consensus       138 ~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (312)
                      .+.+... |.++.|-.+.++..+..    +.      +   .++.   ++..+|.+++..|+.++...............
T Consensus       167 g~~i~A~eA~~~GLV~~vv~~~~~~----~~------~---~a~~---la~~~p~a~~~~K~~l~~~~~~~~~~~~~e~~  230 (267)
T 3hp0_A          167 TKPISVQEASEWGLIDAFDAESDVL----LR------K---HLLR---LRRLNKKGIAHYKQFMSSLDHQVSRAKATALT  230 (267)
T ss_dssp             CCCBCHHHHHHHTSSSCBCSCTTHH----HH------H---HHHH---HTTSCHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHCCCcceecCCHHHH----HH------H---HHHH---HHhCCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            3555666 88988888887643322    11      1   2333   45678999999999887643222222223345


Q ss_pred             HHHhhcC-CCCHHHHHHHHHcccCCCCchH
Q 021410          217 IVDKCFG-LDTVEEIIDSLESEASLINDPW  245 (312)
Q Consensus       217 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~  245 (312)
                      .+..++. .+..|++.++++|+.|.+.+.|
T Consensus       231 ~~~~~~~s~d~~Eg~~AF~ekr~P~~~~~~  260 (267)
T 3hp0_A          231 ANQDMFSDPQNQMGIIRYVETGQFPWEDQE  260 (267)
T ss_dssp             HHHHHTTSTTHHHHHHHHTTSCCC------
T ss_pred             HHHHHhCCHHHHHHHHHHHhcCCCCCCCCC
Confidence            6777885 5566778888999987765543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	7e-28
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	9e-19
d1dcia_	275	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	4e-15
d1hzda_	266	c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T	4e-14
d2f6qa1	245	c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C	2e-13
d1q52a_	297	c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter	6e-12
d1pjha_	266	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	7e-11
d1nzya_	269	c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps	7e-10
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	9e-09
d2fw2a1	258	c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Hum	6e-07
d2a7ka1	230	c.14.1.3 (A:1-230) Carbapenem biosynthes protein C	1e-05
d1szoa_	249	c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus	2e-05
d1sg4a1	249	c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d	3e-05
d1wz8a1	263	c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TT	5e-05
d1ef8a_	261	c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Esc	2e-04

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  106 bits (266), Expect = 7e-28
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 7/162 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
                 +     S    +    KP +A +NG  +GGG  +++      A  K  F  PE 
Sbjct: 78  --FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 135

Query: 124 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACG 164
           L+G  P AG +  L+   G  L   + LTG +++  +    G
Sbjct: 136 LLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 177

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 81.7 bits (200), Expect = 9e-19
 Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 1/167 (0%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
            LN P   N L+  M   L +     E DP +  V + G G+AF AG D+  L      G
Sbjct: 13  FLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELG 72

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             EE      +L    + + T+ KP VA +NG  + GGAG+++     V   +      E
Sbjct: 73  A-EENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTE 131

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 169
             IGF     +   +  +     + L LTG  +   E  A GL    
Sbjct: 132 VKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI 178

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.7 bits (174), Expect = 4e-15
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 7/147 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78

Query: 64  L-------EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
                      +D          ++    KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138

Query: 117 VFATPETLIGFHPDAGASFYLSHLPGH 143
            F   E  +G   D G    L  + G+
Sbjct: 139 FFQVKEVDVGLAADVGTLQRLPKVIGN 165

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (166), Expect = 4e-14
 Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 3/170 (1%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           +NR    N+L+ N+   L+K   A ++D  +  + ++         G          +  
Sbjct: 21  INRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD---LKERAKMS 77

Query: 64  LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 123
             E   F   + + I  +     P +A ++G+ +GGG  +++    RVA         ET
Sbjct: 78  SSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVET 137

Query: 124 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSE 173
            +   P  G +  L    G       +  A++   +         + + +
Sbjct: 138 KLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQ 187

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (161), Expect = 2e-13
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 1/137 (0%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           + NRP   NA+NT M  ++ +  KA   D +I  V + G+G  + +G D+ +       G
Sbjct: 17  MFNRPKKKNAINTEMYHEIMRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGG 75

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             E+ K+    L  F+       KP +A++NG  +G    +        A  +  F TP 
Sbjct: 76  VEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPF 135

Query: 123 TLIGFHPDAGASFYLSH 139
           + +G  P+  +S+    
Sbjct: 136 SHLGQSPEGCSSYTFPK 152

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 62.8 bits (151), Expect = 6e-12
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--- 60
            NRP   NA   +   +L ++       P++G V + G+G +   GG             
Sbjct: 35  FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRG 94

Query: 61  -----------QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 98
                         ++  +     +     L+    K  + ++NG   G
Sbjct: 95  RSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAG 143

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.3 bits (142), Expect = 7e-11
 Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 9/181 (4%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
           L  P  LNAL       L +L +  + + ++ F  ++ SGR F +G D   +        
Sbjct: 20  LINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDT 79

Query: 64  LEECK-------DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 116
            +          +F             H K  +  LNG  +G  A +        +    
Sbjct: 80  NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDK 139

Query: 117 VFATPETLIGFHPD--AGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 174
           V+                          +      +         M   G  +       
Sbjct: 140 VYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPS 199

Query: 175 L 175
            
Sbjct: 200 S 200

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

 Score = 56.3 bits (134), Expect = 7e-10
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 1/141 (0%)

Query: 4   LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QG 62
           +  P   NAL+     ++       E D ++G V + G+  AFCAG  +  +       G
Sbjct: 18  IKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAG 77

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
             +  +      +  I+ +    +P +A +NGV  GGG G+S+     +      F    
Sbjct: 78  VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137

Query: 123 TLIGFHPDAGASFYLSHLPGH 143
             IG   D   S+ L+ + G 
Sbjct: 138 HTIGIGNDTATSYSLARIVGM 158

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 53.2 bits (126), Expect = 9e-09
 Identities = 46/281 (16%), Positives = 86/281 (30%), Gaps = 28/281 (9%)

Query: 5   NRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 64
            +  ++N  N     +L +   A + D ++  V +      F  G DI            
Sbjct: 24  LKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDA 83

Query: 65  EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL 124
           E                     P VA +NG+ +GGG  + +   FRV         PE  
Sbjct: 84  ELI-AGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVK 142

Query: 125 IGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK 184
           +G +P  G +  L  L G                +     +A+      +  L    +  
Sbjct: 143 LGIYPGFGGTVRLPRLIGV---------------DNAVEWIASGKENRAEDALKVSAVDA 187

Query: 185 LVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDP 244
           +VT D  +  A L+     +  + +    R   ++K                E  +  + 
Sbjct: 188 VVTAD-KLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAI----------EQMMAFET 236

Query: 245 WCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYR 285
             G          P  ++  +++I++      D+ L  E  
Sbjct: 237 AKGFVAGQAGPNYPAPVEA-IKTIQKAANFGRDKALEVEAA 276

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (111), Expect = 6e-07
 Identities = 33/167 (19%), Positives = 52/167 (31%), Gaps = 1/167 (0%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           +  R +  NALNT +  ++     +   D +   +         C       + H  N  
Sbjct: 17  LSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDR 76

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 122
                 +   T+ +F+       KP V  +NG  +G GA +        A  K  F TP 
Sbjct: 77  N-TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPY 135

Query: 123 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 169
           T  G  PD  +S     + G       L   +   A           
Sbjct: 136 TTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQ 182

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

 Score = 43.7 bits (101), Expect = 1e-05
 Identities = 7/58 (12%), Positives = 20/58 (34%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
          L+ P+  N  +  +   +         D ++  V + G      + G   +    +++
Sbjct: 15 LDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSR 72

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 12/69 (17%), Positives = 20/69 (28%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
          ++         +    +L   F     D     V + G+G +FC   D  S         
Sbjct: 28 VHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDW 87

Query: 64 LEECKDFFR 72
           E   +  R
Sbjct: 88 DEIIFEGQR 96

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 3e-05
 Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 63
             P  +N+L+     +L    +  END +   V +        + G  ++     +   
Sbjct: 19 FKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAH 77

Query: 64 LEECKDFFRTLY 75
                  + L+
Sbjct: 78 YAGYWKAVQELW 89

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Length = 263

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

 Score = 41.8 bits (96), Expect = 5e-05
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 3   ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 62
           I  R   LNA+   +   L ++++  E    +  V ++G G  F AGG    +       
Sbjct: 23  ITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASH 82

Query: 63  KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 99
           +       F      +       +P VA +  V +G 
Sbjct: 83  E--ALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGA 117

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Length = 261

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (91), Expect = 2e-04
 Identities = 9/58 (15%), Positives = 15/58 (25%)

Query: 4  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 61
           N    LNAL+      L +             +    SG    + G  +       +
Sbjct: 19 FNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGR 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	100.0
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	100.0
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	100.0
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	100.0
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	100.0
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	100.0
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	100.0
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	100.0
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	100.0
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	100.0
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	100.0
d2cbya1	179	Clp protease, ClpP subunit {Mycobacterium tubercul	98.4
d1yg6a1	183	Clp protease, ClpP subunit {Escherichia coli [TaxI	98.39
d2f6ia1	190	Clp protease, ClpP subunit {Plasmodium falciparum	98.27
d1y7oa1	192	Clp protease, ClpP subunit {Streptococcus pneumoni	98.26
d1tg6a1	193	Clp protease, ClpP subunit {Human (Homo sapiens),	98.12
d2f9ya1	316	Acetyl-coenzyme A carboxylase carboxyl transferase	97.75
d2f9yb1	263	Acetyl-coenzyme A carboxylase carboxyl transferase	97.7
d1on3a1	253	Methylmalonyl-CoA carboxyltransferase (transcarbox	97.69
d1vrga1	251	Propionyl-CoA carboxylase complex B subunit, PccB	97.44
d1xnya1	258	Propionyl-CoA carboxylase complex B subunit, PccB	97.29
d2a7sa1	258	Propionyl-CoA carboxylase complex B subunit, PccB	97.28
d1pixa2	287	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	97.24
d2a7sa2	271	Propionyl-CoA carboxylase complex B subunit, PccB	96.75
d1on3a2	264	Methylmalonyl-CoA carboxyltransferase (transcarbox	96.2
d1pixa3	299	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	95.97
d1vrga2	264	Propionyl-CoA carboxylase complex B subunit, PccB	95.85
d1uyra1	333	Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc	94.52
d1xnya2	263	Propionyl-CoA carboxylase complex B subunit, PccB	94.05
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	84.7
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	80.49

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-57  Score=396.59  Aligned_cols=240  Identities=22%  Similarity=0.242  Sum_probs=220.9

Q ss_pred             CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||+| ||+++|++|.+|+.+|.++++.++.| ++++|||||.|++||+|+|++++.......+......+...+++++.
T Consensus        14 ~i~l~~rp~~~Nals~~~~~el~~al~~~~~d-~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (258)
T d2fw2a1          14 QIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVN   92 (258)
T ss_dssp             EEEECCSSSSTTCBCHHHHHHHHHHHHHHHHS-SCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcccCCCCHHHHHHHHHHHHHHHcC-CCEEEEEecCccccccccccchhhhcccccccchhhHHHHHHHHHHH
Confidence            47887 79999999999999999999999987 46999999999999999999998765444334445567788889999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++++++||+||++++++|++||+++|++|++|++++++|++|.. +.+|++||++++|+
T Consensus        93 ~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~  172 (258)
T d2fw2a1          93 TFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAR  172 (258)
T ss_dssp             HHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTTCCEEEHH
T ss_pred             hhhccceeeeeecccccccccccccccccccceecccceeeccccccccccccccccchhhcCccccchhhccCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|||++++.+.+.++                                                        
T Consensus       173 eA~~~Glv~~vv~~~~l~~~a~~~--------------------------------------------------------  196 (258)
T d2fw2a1         173 EACAKGLVSQVFLTGTFTQEVMIQ--------------------------------------------------------  196 (258)
T ss_dssp             HHHHTTSCSEEECSTTHHHHHHHH--------------------------------------------------------
T ss_pred             cccccccccccccccccccccchh--------------------------------------------------------
Confidence            999999999999999987544433                                                        


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                 +++|++.||.+++.+|++++.....+++++++.|.+.+..++.   |+|++|||++|++||+
T Consensus       197 -----------a~~i~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~Egi~af~EKR~  255 (258)
T d2fw2a1         197 -----------IKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWS---SAQGIESMLKYVENKI  255 (258)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHSSC
T ss_pred             -----------hhhhhhhhHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                       7899999999999999999999888999999999999999998   9999999999999986

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.2e-57  Score=399.13  Aligned_cols=235  Identities=24%  Similarity=0.328  Sum_probs=215.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...    .  ....+...+..++..
T Consensus        19 ~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~----~--~~~~~~~~~~~~~~~   92 (260)
T d1mj3a_          19 LIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNR----T--FQDCYSGKFLSHWDH   92 (260)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTC----C--HHHHHHC--CCGGGG
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccchhhhhhcc----c--hhhhhHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999999987532    1  122344455667788


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +.+++++|++|+|+|
T Consensus        93 ~~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~~a~~l~l~g~~~~a~e  172 (260)
T d1mj3a_          93 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD  172 (260)
T ss_dssp             GGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred             hccCCCeEEEEEcCeEeHHHHHHHHHCCEEEEcCCCEEECchhccCcCCcccHHHHHHHHhCHHHHHHHHHcCcccCchh
Confidence            9999999999999999999999999999999999999999999999999999999999999998 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++|||++|++++++.+.+..                                                          
T Consensus       173 A~~~Glv~~v~~~~~~~~~a~~----------------------------------------------------------  194 (260)
T d1mj3a_         173 AKQAGLVSKIFPVETLVEEAIQ----------------------------------------------------------  194 (260)
T ss_dssp             HHHHTSCSEEECTTTHHHHHHH----------------------------------------------------------
T ss_pred             hccCCCceeeeccccccccccc----------------------------------------------------------
Confidence            9999999999999988654443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               .+++++..+|.+++.+|++++.....+++++++.|.+.+..++.   |+|++||+++|++||+
T Consensus       195 ---------~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~~~~~~---s~d~~egi~aFleKR~  254 (260)
T d1mj3a_         195 ---------CAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFA---TDDRREGMSAFVEKRK  254 (260)
T ss_dssp             ---------HHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGG---SHHHHHHHHHHHTTSC
T ss_pred             ---------ccccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                     37899999999999999999999999999999999999999998   9999999999999986

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-56  Score=393.75  Aligned_cols=241  Identities=21%  Similarity=0.243  Sum_probs=222.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|.|++.+..    ........+...++.++.
T Consensus        18 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~----~~~~~~~~~~~~~~~~~~   93 (266)
T d1hzda_          18 VLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAK----MSSSEVGPFVSKIRAVIN   93 (266)
T ss_dssp             EEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTT----SCHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccccccccccc----ccchhhhhhhhHHHHHHH
Confidence            5899999999999999999999999999999999999999998 68999999998753    234556667788889999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +.++++||+.++|+
T Consensus        94 ~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~  173 (266)
T d1hzda_          94 DIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGK  173 (266)
T ss_dssp             HHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHH
T ss_pred             HHhcCCcccccccccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHHHHHHhhhccCCccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|||++++.+...                                                          
T Consensus       174 eA~~~Glv~~vv~~~~l~~~~~----------------------------------------------------------  195 (266)
T d1hzda_         174 EAKAVGLISHVLEQNQEGDAAY----------------------------------------------------------  195 (266)
T ss_dssp             HHHHHTSCSEEECCCTTSCHHH----------------------------------------------------------
T ss_pred             HhhcccccccccChhhhhhHHH----------------------------------------------------------
Confidence            9999999999999988754322                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                           +++.+.+++++..||.+++.+|++++.+...+++++++.|...+..++.   |+|++||++||++||+
T Consensus       196 -----~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~---s~d~~Eg~~AF~eKR~  260 (266)
T d1hzda_         196 -----RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIP---TKDRLEGLLAFKEKRP  260 (266)
T ss_dssp             -----HHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTT---CHHHHHHHHHHTTTSC
T ss_pred             -----HHHHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                 2344568899999999999999999999999999999999999999988   9999999999999996

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-55  Score=386.43  Aligned_cols=239  Identities=24%  Similarity=0.255  Sum_probs=220.1

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++++|||||.|+.||+|+|++.+.... ..+......+....+.++..
T Consensus        11 ~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~   89 (253)
T d1uiya_          11 VVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVT-ELGAEENYRHSLSLMRLFHR   89 (253)
T ss_dssp             EEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHT-TSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhcc-ccCcccccchhhhhhhhhhH
Confidence            58999999999999999999999999999999999999999999999999999876543 33455556667778889999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++|||||++++++|++||.++|++| +|++++|++++|.. +++|++||++|+|+|
T Consensus        90 i~~~~kpvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~-~~~~~~l~~~~g~~~a~~l~l~g~~~~a~e  168 (253)
T d1uiya_          90 VYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVA-ALVSVILVRAVGEKAAKDLLLTGRLVEARE  168 (253)
T ss_dssp             HHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCC-HHHHHHHHHHSCHHHHHHHHHHCCEEEHHH
T ss_pred             HhcCCCCEEEEeCeEEehhhHHHHhhhhhhhhhhhhHHhhhhccccccc-ccchhhhhcccCHHHHHHHhhcCcCCCHHH
Confidence            9999999999999999999999999999999999999999999999877 56788899999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+..                                                          
T Consensus       169 A~~~Glv~~v~~~~~~~~~a~~----------------------------------------------------------  190 (253)
T d1uiya_         169 AKALGLVNRIAPPGKALEEAKA----------------------------------------------------------  190 (253)
T ss_dssp             HHHHTSCSEEECTTCHHHHHHH----------------------------------------------------------
T ss_pred             HHHhCCCcccccccccchhHHH----------------------------------------------------------
Confidence            9999999999999998754443                                                          


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                               +++++++.||.+++.+|+++++....+++++++.|.+.+..++.   |+|++||++||++||+
T Consensus       191 ---------~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~---s~d~~egi~af~eKR~  250 (253)
T d1uiya_         191 ---------LAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRE---TGDLAEGIRAFFEKRP  250 (253)
T ss_dssp             ---------HHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHTTSC
T ss_pred             ---------HHHhhcccchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                     48899999999999999999999999999999999999999888   9999999999999996

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.3e-56  Score=391.61  Aligned_cols=237  Identities=17%  Similarity=0.184  Sum_probs=216.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||| ||++.|++|.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....  ...+....+....++++..
T Consensus        22 ~itl-rp~~~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~--~~~~~~~~~~~~~~~~~~~   98 (263)
T d1wz8a1          22 EITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMR--ASHEALLRVFWEARDLVLG   98 (263)
T ss_dssp             EEEE-CCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHH--HCHHHHHHHHHHHHHHHHH
T ss_pred             EEEE-CCCCCCCCCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhc--ccccccccchhhhhHHHHH
Confidence            4889 899999999999999999999999999999999999999999999999986542  2345566777778899999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++|.. +.+++++|++++|+|
T Consensus        99 i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~~G~~~a~~l~l~g~~i~a~e  178 (263)
T d1wz8a1          99 PLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEE  178 (263)
T ss_dssp             HHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHH
T ss_pred             hhhhhcceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccchhH
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+.                                                           
T Consensus       179 A~~~Glv~~vv~~~~l~~~a~-----------------------------------------------------------  199 (263)
T d1wz8a1         179 AERLGLVALAVEDEKVYEKAL-----------------------------------------------------------  199 (263)
T ss_dssp             HHHHTSSSEEECGGGHHHHHH-----------------------------------------------------------
T ss_pred             HHhcCCcccccchhhhhHHHH-----------------------------------------------------------
Confidence            999999999999988765444                                                           


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                              +.+++|++.||.+++.+|+++++.....+ +.++.|.......+.   |+|++||++||++||+
T Consensus       200 --------~~a~~la~~~~~al~~~K~~l~~~~~~~~-~~~~~e~~~~~~~~~---s~d~~Egi~Af~eKR~  259 (263)
T d1wz8a1         200 --------EVAERLAQGPKEALHHTKHALNHWYRSFL-PHFELSLALEFLGFS---GKELEEGLKALKEKRP  259 (263)
T ss_dssp             --------HHHHHHHTSCHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHGGG---SHHHHHHHHHHHTTSC
T ss_pred             --------HHHHHhhccHHHHHHHHHHHHHHHHhChH-HHHHHHHHHHHHHcc---CHHHHHHHHHHhCCCC
Confidence                    34899999999999999999998877665 458889999888887   9999999999999996

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-54  Score=385.71  Aligned_cols=241  Identities=20%  Similarity=0.253  Sum_probs=215.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCC---h----HHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK---L----EECKDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---~----~~~~~~~~~   73 (312)
                      +||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|+.++........   .    .....+...
T Consensus        16 ~itlnrP~~~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (275)
T d1dcia_          16 HVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISR   95 (275)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhcccccccccccchhhhhccchhh
Confidence            589999999999999999999999999999999999999999999999999998875432221   1    122344555


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH--HHHHHhc
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--GEFLALT  151 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~--a~~l~lt  151 (312)
                      ++.++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|..  +.+++++
T Consensus        96 ~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~~~~~g~~~~~~~ll~~  175 (275)
T d1dcia_          96 YQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFT  175 (275)
T ss_dssp             HHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCEEEEEeeEeehhhHHHHhhcCchhhccCccccchhccccccccccccccccccccccccccccccc
Confidence            67888899999999999999999999999999999999999999999999999999999999999999954  5689999


Q ss_pred             CCCCCHHHHHHcCccceecCCCCh-hHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHH
Q 021410          152 GAKLNGAEMMACGLATHYSVSEKL-PLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI  230 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (312)
                      |+.++|+||+++||||+|+|+++. .....                                                  
T Consensus       176 g~~~~a~eA~~~Glv~~v~~~~~~l~~~~~--------------------------------------------------  205 (275)
T d1dcia_         176 ARKMMADEALDSGLVSRVFPDKDVMLNAAF--------------------------------------------------  205 (275)
T ss_dssp             CCEEEHHHHHHHTSSSEEESSHHHHHHHHH--------------------------------------------------
T ss_pred             ccccchhhhccCCCceeeeehhhhhhhccc--------------------------------------------------
Confidence            999999999999999999987653 22222                                                  


Q ss_pred             HHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccC
Q 021410          231 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNK  310 (312)
Q Consensus       231 ~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r  310 (312)
                                       +.+++|++.+|.+++.+|+.++++...+++++++.|.+.+..++.   ++|++|||+||++||
T Consensus       206 -----------------~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~d~~Egi~AfleKR  265 (275)
T d1dcia_         206 -----------------ALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQ---TQDIIKSVQAAMEKK  265 (275)
T ss_dssp             -----------------HHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTS---SHHHHHHHHHHHTTC
T ss_pred             -----------------ccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCC
Confidence                             347899999999999999999999999999999999999999998   999999999999999


Q ss_pred             C
Q 021410          311 H  311 (312)
Q Consensus       311 ~  311 (312)
                      +
T Consensus       266 ~  266 (275)
T d1dcia_         266 D  266 (275)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=100.00  E-value=8.1e-55  Score=385.39  Aligned_cols=241  Identities=21%  Similarity=0.257  Sum_probs=217.6

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhc-cCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... ....+....+...++.++.
T Consensus        15 ~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (269)
T d1nzya_          15 EITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIH   94 (269)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhcccccchhhHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999999999999998742110 0112223334455678889


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++|||||++++++|++||.++|++|++|+++++++++|.. ++++++||+.|+|+
T Consensus        95 ~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~~~a~~l~ltg~~i~a~  174 (269)
T d1nzya_          95 KIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPE  174 (269)
T ss_dssp             HHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHH
T ss_pred             HHHhhcchhehhhhhhcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccChhhhhhccccccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       175 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  197 (269)
T d1nzya_         175 EAKDWGLVSRVYPKDEFREVAWK---------------------------------------------------------  197 (269)
T ss_dssp             HHHHHTSCSCEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHcCCccccccccccccchhh---------------------------------------------------------
Confidence            99999999999998777654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                .+++|++.||.+++.+|+.+++....+++++++.|.+.+...+.   ++|++|||++|++||+
T Consensus       198 ----------~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---~~~~~e~v~aflekrk  257 (269)
T d1nzya_         198 ----------VARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVT---HPHFMPCLTRFLDGHR  257 (269)
T ss_dssp             ----------HHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH---STTHHHHHHHHHTTCC
T ss_pred             ----------hhhhhhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHCCCC
Confidence                      37899999999999999999999999999999999999999998   9999999999999986

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.1e-52  Score=378.26  Aligned_cols=278  Identities=15%  Similarity=0.161  Sum_probs=221.8

Q ss_pred             CEEec-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln-~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +|+|| ||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...... ............++++.
T Consensus        19 ~i~ln~~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~~~~~~~~~~   97 (310)
T d1wdka4          19 ELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKL-PDAELIAGNLEANKIFS   97 (310)
T ss_dssp             EEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTS-CHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccc-cchhhhhhhhHHHHHHH
Confidence            58998 89999999999999999999999999999999999999999999999998765422 23333344455778899


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +.+++++|+.++|+
T Consensus        98 ~l~~~~kPvIaav~G~a~GgG~elal~cD~ria~~~a~f~~pe~~~Gl~P~~gg~~~L~r~iG~~~a~~lll~g~~~~a~  177 (310)
T d1wdka4          98 DFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAE  177 (310)
T ss_dssp             HHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred             HhhcCCccceeeccccccccccccchhhhhhhccccceecccccccCCCccccchhhhhhhhhhhhhhhhhccccccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHH-hhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      ||+++||||+|+|++++.+.+.++ .+++..++......+.. ......                  +.++....+ +  
T Consensus       178 eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~-~--  235 (310)
T d1wdka4         178 DALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPK-LEKLKL------------------NAIEQMMAF-E--  235 (310)
T ss_dssp             HHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHHGGG-GSCCSC------------------CHHHHHHHH-H--
T ss_pred             HHhhccCccEEccHHHHHHHHHHHHHHHHhcccchhhhhhhh-cccccc------------------cchhhhHHH-H--
Confidence            999999999999999998877777 44444443322211111 111110                  111111110 0  


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                            .+.....++...+.| +...+.+.+..+...+++++|+.|.+.|.+++.   |++.++++++|+++|.
T Consensus       236 ------~~~~~~~~~~~~~~p-A~~~~l~~v~~~~~~~~~~~L~~E~~~f~~l~~---t~~a~~~i~aF~~kr~  299 (310)
T d1wdka4         236 ------TAKGFVAGQAGPNYP-APVEAIKTIQKAANFGRDKALEVEAAGFAKLAK---TSASNCLIGLFLNDQE  299 (310)
T ss_dssp             ------HHHHHHHHHHCTTCH-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHH
T ss_pred             ------HhhhhhhhhccCCCh-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHhhhh
Confidence                  011112333333444 555578899999999999999999999999998   9999999999998873

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-53  Score=367.96  Aligned_cols=230  Identities=22%  Similarity=0.269  Sum_probs=205.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||+++|++|.+|+.+|.++++.++.|+.+ +||++|.|++||+|+|++++..............+...+++++..
T Consensus        15 ~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (245)
T d2f6qa1          15 KIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC   93 (245)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhcccccccccccchhhhHHHHHHhh
Confidence            5899999999999999999999999999999887 899999999999999999986543222223344455667788899


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAE  159 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~e  159 (312)
                      +.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +++++++|+.++|+|
T Consensus        94 i~~~~kpvIa~v~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~e  173 (245)
T d2f6qa1          94 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE  173 (245)
T ss_dssp             HHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHH
T ss_pred             hhhcCCceEEEECCccccccccchhhhhhhhhhccCeEecccccCCCCccccchhhcccccccchhhhhccccccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999 999999999999999


Q ss_pred             HHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcccC
Q 021410          160 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEAS  239 (312)
Q Consensus       160 A~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  239 (312)
                      |+++||||+|+|++++.+.+..+                                                         
T Consensus       174 A~~~Glv~~vv~~~~l~~~a~~~---------------------------------------------------------  196 (245)
T d2f6qa1         174 ACAQGLVTEVFPDSTFQKEVWTR---------------------------------------------------------  196 (245)
T ss_dssp             HHHTTSCSEEECTTTHHHHHHHH---------------------------------------------------------
T ss_pred             ccccccccccCCcchHHHHHHHH---------------------------------------------------------
Confidence            99999999999999987655443                                                         


Q ss_pred             CCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhh
Q 021410          240 LINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYE  301 (312)
Q Consensus       240 ~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~e  301 (312)
                                ++++++.||.+++.+|++++......+++.++.|...+..+|.   |+|+++
T Consensus       197 ----------a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~---s~d~~n  245 (245)
T d2f6qa1         197 ----------LKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWL---SDECTN  245 (245)
T ss_dssp             ----------HHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHT---SHHHHC
T ss_pred             ----------HHHHHcCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhc---CcccCC
Confidence                      7899999999999999999999888999999999999999998   998863

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.1e-54  Score=378.59  Aligned_cols=235  Identities=18%  Similarity=0.215  Sum_probs=203.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC--CCceeccCCchhHHHhhccCChHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--GRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI   78 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~--g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (312)
                      +||||||+++|++|.+|+.+|.+++++++ ++++++|||+|.  |++||+|+||+++.....+  .   ..+...+++++
T Consensus        16 ~Itlnrp~~~Nal~~~~~~~l~~al~~~~-~~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~--~---~~~~~~~~~~~   89 (261)
T d1ef8a_          16 VIEFNYGRKLNALSKVFIDDLMQALSDLN-RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRD--P---LSYDDPLRQIT   89 (261)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHTC-STTCCEEEEECCTTCSEEECCSCSTTC-----C--T---TCTTSHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHh-CCCCEEEEEeccccchhhcccccccccccCCcc--c---cccccchhhhH
Confidence            58999999999999999999999999997 457999999986  4799999999988653211  1   12344566788


Q ss_pred             HHHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCH
Q 021410           79 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNG  157 (312)
Q Consensus        79 ~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a  157 (312)
                      ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++|++|.. +.++++||+.|+|
T Consensus        90 ~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~Gl~~~~~~~~~l~r~~g~~~a~~~~l~g~~~~a  169 (261)
T d1ef8a_          90 RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITA  169 (261)
T ss_dssp             HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEH
T ss_pred             HHHHhCchhhhhcccccccchhhhhhhhhhhhhhhHhHHHhhhhcccccccccccccccccccCccccccccccCceEcH
Confidence            899999999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             HHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHcc
Q 021410          158 AEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESE  237 (312)
Q Consensus       158 ~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (312)
                      +||+++||||+++|++++.+.+.                                                         
T Consensus       170 ~eA~~~Glv~~vv~~~~~~~~a~---------------------------------------------------------  192 (261)
T d1ef8a_         170 QRALAVGILNHVVEVEELEDFTL---------------------------------------------------------  192 (261)
T ss_dssp             HHHHHTTSCSEEECHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHHcCCcceeeechhhhhhhH---------------------------------------------------------
Confidence            99999999999999887764443                                                         


Q ss_pred             cCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCH--HHHHHHHHHHHHHhhhcCCCCChhhhhheeeccCC
Q 021410          238 ASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTF--DECLVREYRMSLQGVSRLISGDFYEVSNFQILNKH  311 (312)
Q Consensus       238 ~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l--~~~l~~e~~~~~~~~~~~~~~d~~eg~~a~l~~r~  311 (312)
                                +++++|++.||.+++.+|+.++......+  ...++.+...+..++.   |+|++||++||++||+
T Consensus       193 ----------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---s~D~~Egi~AfleKR~  255 (261)
T d1ef8a_         193 ----------QMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYD---SEDYQEGMNAFLEKRK  255 (261)
T ss_dssp             ----------HHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHT---SHHHHHHHHHHHTTSC
T ss_pred             ----------HHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhC---CHHHHHHHHHHhCCCC
Confidence                      34899999999999999999987765443  4556666666777777   9999999999999996

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.1e-52  Score=372.42  Aligned_cols=240  Identities=16%  Similarity=0.202  Sum_probs=197.5

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeC-------CCceeccCCchhHHHhhcc-------CChHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-------GRAFCAGGDIVSLYHFMNQ-------GKLEE   66 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~-------g~~F~aG~Dl~~~~~~~~~-------~~~~~   66 (312)
                      +||||||+++|+||.+|+.+|.+++++++.|+++|+|||||.       |+.||+|.|++........       ...+.
T Consensus        32 ~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~~~~~~~~~~~~~~~~~~  111 (297)
T d1q52a_          32 RVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDV  111 (297)
T ss_dssp             EEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC-----------------------
T ss_pred             EEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhcccccccccccccchhhh
Confidence            599999999999999999999999999999999999999997       4678888898765432111       01112


Q ss_pred             HHHHHHHHHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHH-
Q 021410           67 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-  144 (312)
Q Consensus        67 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-  144 (312)
                      .......++.++..|.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|++|++++|+|++|.. 
T Consensus       112 ~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~p~~~~~~~L~r~iG~~~  191 (297)
T d1q52a_         112 ARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKF  191 (297)
T ss_dssp             ------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCCSTTTHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCeEEEEEcceeeeccchhhhhhhccccccccccceeeeeccccccccccccccccccCccc
Confidence            2233344667888899999999999999999999999999999999875 57999999999999999999999999999 


Q ss_pred             HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCC
Q 021410          145 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL  224 (312)
Q Consensus       145 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (312)
                      +.++++||+.++|+||+++||||+|+|++++.+.+.++                                          
T Consensus       192 a~~llltg~~~~a~eA~~~Glv~~vv~~~el~~~~~~~------------------------------------------  229 (297)
T d1q52a_         192 AREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQW------------------------------------------  229 (297)
T ss_dssp             HHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHHHH------------------------------------------
T ss_pred             eeeccccccccchHhhhhhccccccCchHHhhHHHHHH------------------------------------------
Confidence            99999999999999999999999999999887554433                                          


Q ss_pred             CCHHHHHHHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 021410          225 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN  304 (312)
Q Consensus       225 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~  304 (312)
                                               ++++++.||.+++.+|++++... .++.+....|.+.+..++.   |+|++||++
T Consensus       230 -------------------------a~~l~~~~~~a~~~~K~~~~~~~-~~~~~~~~~~~~~~~~~~~---s~d~~Egv~  280 (297)
T d1q52a_         230 -------------------------AAEINAKSPQAQRMLKFAFNLLD-DGLVGQQLFAGEATRLAYM---TDEAVEGRD  280 (297)
T ss_dssp             -------------------------HHHHHTSCHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHHHT---SHHHHHHHH
T ss_pred             -------------------------hhhhccCCHHHHHHHHHHHHHhh-cChHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence                                     79999999999999999998754 4555555667777777776   999999999


Q ss_pred             eeeccCC
Q 021410          305 FQILNKH  311 (312)
Q Consensus       305 a~l~~r~  311 (312)
                      ||++||+
T Consensus       281 AF~eKR~  287 (297)
T d1q52a_         281 AFLQKRP  287 (297)
T ss_dssp             HHHTTSC
T ss_pred             HHhCCCC
Confidence            9999986

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=100.00  E-value=8.6e-51  Score=351.21  Aligned_cols=215  Identities=15%  Similarity=0.221  Sum_probs=193.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCC-CceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.| ++||+|.|++++....   ..+....+...+.+++.
T Consensus        12 ~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~---~~~~~~~~~~~~~~~~~   88 (230)
T d2a7ka1          12 VITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLS---RSEDIEEWIDRVIDLYQ   88 (230)
T ss_dssp             EEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC----CHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhcccccccccc---cccccccchhhhhhhhh
Confidence            5899999999999999999999999999999999999999987 7999999999986432   24456677788889999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+ .+|++++|.. ++++++||+.++|+
T Consensus        89 ~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~-~~l~~~iG~~~a~~l~l~g~~~~a~  167 (230)
T d2a7ka1          89 AVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGA-AILGFTHGFSTMQEIIYQCQSLDAP  167 (230)
T ss_dssp             HHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHH-HHHHHHHCHHHHHHHHHHCCCBCHH
T ss_pred             cccchhcceeeecccccccccccchhccchhhccccchhhhccccccccccccc-cccccccccccccccccccccchHH
Confidence            999999999999999999999999999999999999999999999999988765 5799999998 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.+                                                         
T Consensus       168 eA~~~Glv~~vv~~~~l~~~a~~---------------------------------------------------------  190 (230)
T d2a7ka1         168 RCVDYRLVNQVVESSALLDAAIT---------------------------------------------------------  190 (230)
T ss_dssp             HHHHHTCCSEEECHHHHHHHHHH---------------------------------------------------------
T ss_pred             HHHHhhhcccCCChHHHHHHHHH---------------------------------------------------------
Confidence            99999999999998777654443                                                         


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHH
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRM  286 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~  286 (312)
                                .+++|++.||.+++.+|+.+++.....+++.++.|..+
T Consensus       191 ----------~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~a~  228 (230)
T d2a7ka1         191 ----------QAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAV  228 (230)
T ss_dssp             ----------HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHHHHh
Confidence                      37899999999999999999998888888888777543

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=3.7e-51  Score=357.59  Aligned_cols=229  Identities=15%  Similarity=0.159  Sum_probs=210.2

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCC-ceeccCCchhHHHhhccCChHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY   79 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (312)
                      +||||||+ .|++|.+|+.+|.++++.+++|+++++|||+|.|+ +||+|+|++++.    .........+...+++++.
T Consensus        16 ~itln~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~----~~~~~~~~~~~~~~~~~~~   90 (249)
T d1sg4a1          16 VMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMC----GRSPAHYAGYWKAVQELWL   90 (249)
T ss_dssp             EEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGS----SCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCC-cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEeccccccccc----ccccccccccchhhHHHHH
Confidence            58999997 69999999999999999999999999999999984 799999999874    2345666778888889999


Q ss_pred             HHhhCCCcEEEEEccceecccceeecCCCeEEEeCceeE--ecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCC
Q 021410           80 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF--ATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  156 (312)
Q Consensus        80 ~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f--~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~  156 (312)
                      .+.++||||||+|||+|+|||++|+++||+||++++++|  ++||+++|++|++|++++|++++|.. ++++++||++++
T Consensus        91 ~l~~~~kpvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~  170 (249)
T d1sg4a1          91 RLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFP  170 (249)
T ss_dssp             HHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBC
T ss_pred             hhhcCccccchhhcccccccccccccccccceeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999876  78999999999999999999999999 999999999999


Q ss_pred             HHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHc
Q 021410          157 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLES  236 (312)
Q Consensus       157 a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  236 (312)
                      |++|+++||||+++|++++.+.+.++                                                      
T Consensus       171 a~~A~~~Glv~~v~~~~~l~~~a~~~------------------------------------------------------  196 (249)
T d1sg4a1         171 PAEALQVGIVDQVVPEEQVQSTALSA------------------------------------------------------  196 (249)
T ss_dssp             HHHHHHHTSSSEEECGGGHHHHHHHH------------------------------------------------------
T ss_pred             HHHHHhhccccccCChHHHHHHHHHH------------------------------------------------------
Confidence            99999999999999988877544433                                                      


Q ss_pred             ccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhhcCCCCChhhhhh
Q 021410          237 EASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVSRLISGDFYEVSN  304 (312)
Q Consensus       237 ~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~~~d~~eg~~  304 (312)
                                   ++++++.||.+++.+|+++++.....+.+.++.|.+.+...+.   +++++++|+
T Consensus       197 -------------a~~l~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~---~e~~~~~le  248 (249)
T d1sg4a1         197 -------------IAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFIS---KDSIQKSLQ  248 (249)
T ss_dssp             -------------HHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHT---SHHHHHHHT
T ss_pred             -------------HHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhC---CHHHHHhcC
Confidence                         7899999999999999999999888999999999999998887   888998875

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-49  Score=350.46  Aligned_cols=231  Identities=16%  Similarity=0.119  Sum_probs=197.4

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccC-------ChHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG-------KLEECKDFFRT   73 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-------~~~~~~~~~~~   73 (312)
                      +||||||+++|++|.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++.......       .......+...
T Consensus        17 ~Itlnrp~~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (266)
T d1pjha_          17 IIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVAR   96 (266)
T ss_dssp             EEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHH
T ss_pred             EEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhccccccccccchhhHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999986432111       12234456667


Q ss_pred             HHHHHHHHhhCCCcEEEEEccceecccceeecCCCeEEEeC-ceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhc
Q 021410           74 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT  151 (312)
Q Consensus        74 ~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~lt  151 (312)
                      ...++..+.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++++|++|.. +.+|++|
T Consensus        97 ~~~~~~~l~~~~kP~IAav~G~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r~~g~~~a~~lllt  176 (266)
T d1pjha_          97 NVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMF  176 (266)
T ss_dssp             HHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHT
T ss_pred             HHHHHHHHHhcchhhhhhhhcccccccccchhccchhhhhhccccccccccccccccccccccccccccccchhhhhhcc
Confidence            77888999999999999999999999999999999999965 689999999999999999999999999999 9999999


Q ss_pred             CCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHH
Q 021410          152 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEII  231 (312)
Q Consensus       152 g~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (312)
                      |+.++|+||+++||||+|+++++....  ++                                                 
T Consensus       177 g~~~~a~eA~~~Glv~~v~~~~~~~~~--~~-------------------------------------------------  205 (266)
T d1pjha_         177 NKPFKYDIMCENGFISKNFNMPSSNAE--AF-------------------------------------------------  205 (266)
T ss_dssp             TCCEEHHHHHHTTCCSEECCCCTTCHH--HH-------------------------------------------------
T ss_pred             CCcCCHHHHHHCCCEeEeeCchhhhHH--HH-------------------------------------------------
Confidence            999999999999999999987765421  11                                                 


Q ss_pred             HHHHcccCCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHhhh
Q 021410          232 DSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREYRMSLQGVS  292 (312)
Q Consensus       232 ~~l~~~~~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~  292 (312)
                                ..+.+.++++++...++.++..+|++++......+..++..|.+...+.|.
T Consensus       206 ----------~~~~~~~l~~~~~~~~~~s~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~f~  256 (266)
T d1pjha_         206 ----------NAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNESLKYWV  256 (266)
T ss_dssp             ----------HHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence                      001233457788889999999999999988888888888888887776665

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=100.00  E-value=6.5e-48  Score=336.84  Aligned_cols=212  Identities=17%  Similarity=0.229  Sum_probs=189.8

Q ss_pred             CEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHH
Q 021410            1 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL   80 (312)
Q Consensus         1 ~itln~p~~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (312)
                      +||||||++.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|++++.    ..+.+....+...++.++..
T Consensus        25 ~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~----~~~~~~~~~~~~~~~~l~~~  100 (249)
T d1szoa_          25 LVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFN----LGTPHDWDEIIFEGQRLLNN  100 (249)
T ss_dssp             EEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSC----CSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEeeecccccccccchhhhhh----cccccchhhhhhhhhhhhhh
Confidence            58999999999999999999999999999999999999999999999999999874    33456667777788899999


Q ss_pred             HhhCCCcEEEEEccceecccceeecCCCeEEEeCceeEe-cCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHH
Q 021410           81 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGA  158 (312)
Q Consensus        81 l~~~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~-~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~  158 (312)
                      +.++||||||+|||+|. ||++|+++||+||++++++|. +||+++|++|++|++++++|++|.. ++++++||++++++
T Consensus       101 i~~~~~pvIa~v~g~~~-GG~~l~l~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~~a~~l~ltg~~~~a~  179 (249)
T d1szoa_         101 LLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDAR  179 (249)
T ss_dssp             HHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHH
T ss_pred             cccCcccceeeeccccc-cccccccccccccccCCcEEEEeeccccccccccccccccccccCccceeeecccCCCCCHH
Confidence            99999999999999885 577999999999999999995 7999999999999999999999999 99999999999999


Q ss_pred             HHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHHHHhhcCCCCHHHHHHHHHccc
Q 021410          159 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEA  238 (312)
Q Consensus       159 eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  238 (312)
                      ||+++||||+|+|++++.+.+.                                                          
T Consensus       180 eA~~~Glv~~vv~~~~l~~~a~----------------------------------------------------------  201 (249)
T d1szoa_         180 TALDYGAVNEVLSEQELLPRAW----------------------------------------------------------  201 (249)
T ss_dssp             HHHHHTSCSEEECHHHHHHHHH----------------------------------------------------------
T ss_pred             HHHHhCCcCcccCHHHHHHHHH----------------------------------------------------------
Confidence            9999999999999877764433                                                          


Q ss_pred             CCCCchHHHHHHHHHHhcCchHHHHHHHHHHhhhcCCHHHHHHHHH
Q 021410          239 SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGRFQTFDECLVREY  284 (312)
Q Consensus       239 ~~~~~~~a~~~~~~i~~~~p~a~~~~k~~l~~~~~~~l~~~l~~e~  284 (312)
                               +.++++++.||.+++.+|+++++.....+++.++.+.
T Consensus       202 ---------~~a~~la~~~~~a~~~~K~~l~~~~~~~~e~~l~~~l  238 (249)
T d1szoa_         202 ---------ELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGL  238 (249)
T ss_dssp             ---------HHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence                     3489999999999999999998877666666665544

>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.40  E-value=6.4e-07  Score=71.82  Aligned_cols=134  Identities=16%  Similarity=0.131  Sum_probs=86.6

Q ss_pred             CCHHHHHHHHHHHHHhhcC---CCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           13 LNTNMGAKLNKLFKAWEND---PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d---~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      +|.++..++...|..++.+   ..+.+ .|.      |.|+|+...                   ..++..|..++.||.
T Consensus        22 I~~~~~~~~i~~l~~l~~~~~~~~I~l-~In------S~GG~v~~g-------------------l~i~d~i~~~~~~v~   75 (179)
T d2cbya1          22 VNDEIANRLCAQILLLAAEDASKDISL-YIN------SPGGSISAG-------------------MAIYDTMVLAPCDIA   75 (179)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEE-EEE------ECCBCHHHH-------------------HHHHHHHHHCSSCEE
T ss_pred             ECHHHHHHHHHHHHHHhccCCCCeEEE-Eee------CCCCCHHHH-------------------HHHHHHHHhhcccee
Confidence            6788888888877555433   22333 334      456666432                   134455677899999


Q ss_pred             EEEccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHH----Hhh-----------hcChH--H-HHHHH
Q 021410           90 AILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF----YLS-----------HLPGH--L-GEFLA  149 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~----~l~-----------r~~g~--~-a~~l~  149 (312)
                      ..+.|.|.+.|.-+.+++|  .|++.++++|.+.....|......-..    .+.           +..|.  . -...+
T Consensus        76 t~~~G~aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~~~i~~~~  155 (179)
T d2cbya1          76 TYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADS  155 (179)
T ss_dssp             EEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             eehhhhhhhHHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhh
Confidence            9999999999999999999  899999999999887655532111110    010           01111  1 23344


Q ss_pred             hcCCCCCHHHHHHcCccceecCC
Q 021410          150 LTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      -.-..++|+||+++||||+|+..
T Consensus       156 ~~d~~l~a~EA~~~GliDeIi~~  178 (179)
T d2cbya1         156 DRDRWFTAAEALEYGFVDHIITR  178 (179)
T ss_dssp             HTTCEEEHHHHHHHTSCSEECSC
T ss_pred             cCCceecHHHHHHcCCCcEEecC
Confidence            45666999999999999999864

>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=4.8e-07  Score=72.87  Aligned_cols=132  Identities=16%  Similarity=0.123  Sum_probs=89.6

Q ss_pred             CCHHHHHHHHHHHHHhhcCCCce--EEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           13 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      +|.++...+...+..++.++..+  .|.|.      |.|+|+..-                   ..++..|..++.|+..
T Consensus        25 I~~~~~~~~i~~l~~l~~~~~~~~I~l~In------S~GG~v~~g-------------------~~i~d~i~~~~~~v~t   79 (183)
T d1yg6a1          25 VEDHMANLIVAQMLFLEAENPEKDIYLYIN------SPGGVITAG-------------------MSIYDTMQFIKPDVST   79 (183)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE------ECCBCHHHH-------------------HHHHHHHHHSSSCEEE
T ss_pred             ECHHHHHHHHHHHHHhhhhccCCceEEEEe------CCCccHHHH-------------------HHHHHHHHhCCCCEEE
Confidence            67888888888887776433222  23333      456665432                   2345667789999999


Q ss_pred             EEccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHHHhh-------hc-----------Ch--HH-HHH
Q 021410           91 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFYLS-------HL-----------PG--HL-GEF  147 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~-------r~-----------~g--~~-a~~  147 (312)
                      .+.|.|.+.|.-+.+++|  .|++.++++|.+.+...|..   |...-+.       ++           .|  .. ...
T Consensus        80 v~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~---G~~~~i~~~~~~~~~~~~~~~~~~~~~tg~~~e~i~~  156 (183)
T d1yg6a1          80 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQ---GQATDIEIHAREILKVKGRMNELMALHTGQSLEQIER  156 (183)
T ss_dssp             EEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEE---EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred             EEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccc---cCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence            999999999999999988  79999999999988876653   2221111       10           01  11 122


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCC
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      ++-.-..++|+||+++||||+|+..
T Consensus       157 ~~~~d~~lta~EAl~~GliD~Ii~~  181 (183)
T d1yg6a1         157 DTERDRFLSAPEAVEYGLVDSILTH  181 (183)
T ss_dssp             HTSSCEEEEHHHHHHHTSSSEECCC
T ss_pred             HhccCccccHHHHHHcCCCcEEecc
Confidence            2223334799999999999999964

>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Plasmodium falciparum [TaxId: 5833]

Probab=98.27  E-value=4e-06  Score=67.63  Aligned_cols=131  Identities=13%  Similarity=0.075  Sum_probs=89.3

Q ss_pred             CCHHHHHHHHHHHHHhhcC--CCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           13 LNTNMGAKLNKLFKAWEND--PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d--~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      +|.++..++...+..++..  .++.+. |.      |.|+|+...                   ..++..+..++.||..
T Consensus        27 Id~~~~~~~i~~l~~l~~~~~~~I~l~-IN------S~GG~v~~g-------------------~ai~d~i~~~~~~v~t   80 (190)
T d2f6ia1          27 INKKTADELISQLLYLDNINHNDIKIY-IN------SPGGSINEG-------------------LAILDIFNYIKSDIQT   80 (190)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCCSCEEEE-EE------ECCBCHHHH-------------------HHHHHHHHHSSSCEEE
T ss_pred             eCHHHHHHHHHHHHHHhccCCCCeEEE-Ee------CchhhhhHH-------------------HHHHHHHHhhCCceEE
Confidence            6888888888888777543  224333 22      566776432                   2345556778999999


Q ss_pred             EEccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHHHhh------------------hcChH--H-HHH
Q 021410           91 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFYLS------------------HLPGH--L-GEF  147 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~------------------r~~g~--~-a~~  147 (312)
                      .+.|.|.+.|.-++++++  .|++.++++|.+.....|..   |...-+.                  +.-|.  . -..
T Consensus        81 v~~G~aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~---G~~~di~~~~~~l~~~~~~~~~i~a~~tg~~~~~i~~  157 (190)
T d2f6ia1          81 ISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAF---GHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEK  157 (190)
T ss_dssp             EEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC-----------CHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred             EEeccccchhHHHHHhCCCCccccCCCcEEEEcccccccC---CcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            999999999999999988  69999999999999877763   2211111                  11111  1 122


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCC
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      .+-.-..++|+||+++||||+|+++
T Consensus       158 ~~~~d~~l~a~EAl~~GliD~Ii~~  182 (190)
T d2f6ia1         158 DSDRDYYMNALEAKQYGIIDEVIET  182 (190)
T ss_dssp             HHHTTCEECHHHHHHHTSCSEECCC
T ss_pred             hccCCeeecHHHHHHcCCCcEEccc
Confidence            3334455999999999999999964

>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.26  E-value=3e-06  Score=68.56  Aligned_cols=134  Identities=11%  Similarity=0.087  Sum_probs=86.5

Q ss_pred             CCHHHHHHHHHHHHHhhcC-C--CceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           13 LNTNMGAKLNKLFKAWEND-P--NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d-~--~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      +|.++...+...+..++.+ +  .+. +.|.+      .|+|+..-                   ..++..|..++.||.
T Consensus        33 I~~~~~~~~~~~l~~l~~~~~~~~I~-l~InS------~GG~v~~g-------------------lai~d~i~~~~~~v~   86 (192)
T d1y7oa1          33 VEDNMANSVIAQLLFLDAQDSTKDIY-LYVNT------PGGSVSAG-------------------LAIVDTMNFIKADVQ   86 (192)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEE-EEEEE------CCBCHHHH-------------------HHHHHHHHHSSSCEE
T ss_pred             EchHHHHHHHHHHHHhhhhcccCcee-eeecC------CCCCHHHH-------------------HHHHHHHHhcCcceE
Confidence            6788888888877766532 2  233 33344      45555321                   234556778999999


Q ss_pred             EEEccceecccceeecC--CCeEEEeCceeEecCCCcccccCCCchH--H----Hhhh---cC--------h--HH-HHH
Q 021410           90 AILNGVTMGGGAGVSIP--GTFRVACGKTVFATPETLIGFHPDAGAS--F----YLSH---LP--------G--HL-GEF  147 (312)
Q Consensus        90 aav~G~a~GgG~~lal~--~D~~ia~~~a~f~~pe~~~G~~p~~g~~--~----~l~r---~~--------g--~~-a~~  147 (312)
                      ..+.|.|.+.|.-|.++  +|-|++.++++|.+.....|........  .    .+-+   .+        |  .. ...
T Consensus        87 t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~~~~tg~~~~~i~~  166 (192)
T d1y7oa1          87 TIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHA  166 (192)
T ss_dssp             EEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             EEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            99999999999888775  5799999999999999887764321111  0    0111   11        1  11 234


Q ss_pred             HHhcCCCCCHHHHHHcCccceecCC
Q 021410          148 LALTGAKLNGAEMMACGLATHYSVS  172 (312)
Q Consensus       148 l~ltg~~i~a~eA~~~Glv~~vv~~  172 (312)
                      .+-.-..++|+||+++||||+|+..
T Consensus       167 ~~~rd~~lsa~EAleyGliD~Ii~~  191 (192)
T d1y7oa1         167 DAERDNWMSAQETLEYGFIDEIMAN  191 (192)
T ss_dssp             HHHSCCCBCHHHHHHHTSCSEECCC
T ss_pred             hhcCCceecHHHHHHcCCCcEEecC
Confidence            4455667999999999999999864

>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.12  E-value=7.8e-06  Score=66.00  Aligned_cols=130  Identities=13%  Similarity=0.103  Sum_probs=87.7

Q ss_pred             CCHHHHHHHHHHHHHhhcC---CCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           13 LNTNMGAKLNKLFKAWEND---PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        13 l~~~~~~~L~~~l~~~~~d---~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      +|.++...+...+..++..   ..+.+.+ .+      .|+|+..-                   ..++..|..++.||.
T Consensus        35 I~~~~~~~~i~~l~~l~~~~~~~~I~l~I-nS------~GG~v~~g-------------------~~i~d~i~~~~~~V~   88 (193)
T d1tg6a1          35 IDDSVASLVIAQLLFLQSESNKKPIHMYI-NS------PGGVVTAG-------------------LAIYDTMQYILNPIC   88 (193)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEE-EE------CCBCHHHH-------------------HHHHHHHHHSCSCEE
T ss_pred             EchHHHHHHHHHHHHhcccCCCcEEEEEe-ec------CcccHHHH-------------------HHHHHHHHhhcCceE
Confidence            6778888888777666533   2344333 44      45554321                   234556778999999


Q ss_pred             EEEccceecccceeecCCC--eEEEeCceeEecCCCcccccCCCchHHHhh-------hc-----------Ch--HH-HH
Q 021410           90 AILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFYLS-------HL-----------PG--HL-GE  146 (312)
Q Consensus        90 aav~G~a~GgG~~lal~~D--~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~-------r~-----------~g--~~-a~  146 (312)
                      ..+.|.|.+.|.-+.+++|  .|++.++++|.+.....|..   |-..-+.       ++           .|  .. ..
T Consensus        89 tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~---G~~~di~~~~~el~~~~~~i~~i~a~~Tg~~~~~i~  165 (193)
T d1tg6a1          89 TWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGAR---GQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIE  165 (193)
T ss_dssp             EEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCC---SSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred             EEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCC---cCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence            9999999999999999999  59999999999988876653   2211111       00           01  11 12


Q ss_pred             HHHhcCCCCCHHHHHHcCccceecC
Q 021410          147 FLALTGAKLNGAEMMACGLATHYSV  171 (312)
Q Consensus       147 ~l~ltg~~i~a~eA~~~Glv~~vv~  171 (312)
                      .++-.-..++|+||+++||||+|+.
T Consensus       166 ~~~~rD~~lta~EAl~yGliD~Ii~  190 (193)
T d1tg6a1         166 SAMERDRYMSPMEAQEFGILDKVLV  190 (193)
T ss_dssp             HHHSSCEEECHHHHHHHTSCSEECS
T ss_pred             HHhccCccCCHHHHHHcCCCCEEcc
Confidence            3333334499999999999999985

>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=0.0001  Score=63.52  Aligned_cols=138  Identities=12%  Similarity=-0.005  Sum_probs=96.0

Q ss_pred             CCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 021410           11 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA   90 (312)
Q Consensus        11 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Ia   90 (312)
                      -+++++-+..-.+.++.++.- ++-+|-|-=.     .|+....         ..+.......+.+.+..+..+.+|+|+
T Consensus       130 G~~~p~~~rKa~r~~~~a~~~-~~Pii~~vDt-----pG~~~g~---------~~E~~g~~~~~a~~~~~~~~~~vP~i~  194 (316)
T d2f9ya1         130 GMPAPEGYRKALRLMQMAERF-KMPIITFIDT-----PGAYPGV---------GAEERGQSEAIARNLREMSRLGVPVVC  194 (316)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-----SCSCCSH---------HHHHTTHHHHHHHHHHHHHTCSSCEEE
T ss_pred             ccccHHHHHHHHHHHHHHHHc-CcceEEEEec-----CcccCCc---------ccccccHHHHHHHHHHHHHhCCCceEE
Confidence            457888888888888888865 3555555443     3443321         111222345566778889999999999


Q ss_pred             EEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCcccee
Q 021410           91 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHY  169 (312)
Q Consensus        91 av~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~v  169 (312)
                      .|-|.+.|||......+|.+++-++++++.      +.|.++++..+...--.. +.+.    ..+++++.+++|+||+|
T Consensus       195 vv~g~g~~gga~a~~~~d~v~m~~~a~~sv------ispEg~AsILwkd~~~a~eaAea----lklta~dL~~lgiIDeI  264 (316)
T d2f9ya1         195 TVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSI  264 (316)
T ss_dssp             EEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCC
T ss_pred             EEEhhhhchhhhhhhhhhHHHHHhhhHHhh------ccchhhhhHhhccchhhcchHHH----HhhhhHHHHHcCchhhc
Confidence            999999999998888899999999999983      345555544433222222 3332    35789999999999999


Q ss_pred             cCCC
Q 021410          170 SVSE  173 (312)
Q Consensus       170 v~~~  173 (312)
                      +|..
T Consensus       265 I~EP  268 (316)
T d2f9ya1         265 IPEP  268 (316)
T ss_dssp             CCCS
T ss_pred             ccCC
Confidence            9743

>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=0.00018  Score=60.54  Aligned_cols=131  Identities=12%  Similarity=0.166  Sum_probs=81.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      ..-+++....+.+.++++.+.++. +-+|.++-     |.|..+.+-.        .....+ .........+....+|+
T Consensus       108 ~gGS~g~~~~~Ki~~a~e~A~~~~-lPlI~~~~-----sgG~r~~e~~--------~sl~~~-~~~~~~~~~~~~~~vP~  172 (263)
T d2f9yb1         108 MGGSMGSVVGARFVRAVEQALEDN-CPLICFSA-----SGGARMQEAL--------MSLMQM-AKTSAALAKMQERGLPY  172 (263)
T ss_dssp             TTTCBCTHHHHHHHHHHHHHHHHT-CCEEEEEE-----ESSBCGGGTH--------HHHHHH-HHHHHHHHHHHHTTCCE
T ss_pred             hccccccchhhHHhHHHHHHHHcC-CCeEEEec-----CCCccccccc--------chhhcc-hhHHHHHHHHHhCCCce
Confidence            456678888888888888877653 45666654     4555554321        111122 22233334455678999


Q ss_pred             EEEEccceecccc-eeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCC-----CHHHHHH
Q 021410           89 VAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL-----NGAEMMA  162 (312)
Q Consensus        89 Iaav~G~a~GgG~-~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i-----~a~eA~~  162 (312)
                      |+++.|+|.||+. .+++.+|++++.+.+.+++.-.               +++     + ..+|+.+     +++-..+
T Consensus       173 I~v~~g~~~GG~aa~~~~~~d~i~~~~~s~i~~aGP---------------~vv-----e-~~~ge~~~e~~g~a~~~~~  231 (263)
T d2f9yb1         173 ISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGP---------------RVI-----E-QTVREKLPPGFQRSEFLIE  231 (263)
T ss_dssp             EEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCH---------------HHH-----H-HHHTSCCCTTTTBHHHHGG
T ss_pred             EEEecCCcchHHHhhhhhcCceEeeecceeeeccCH---------------HHH-----h-hhcCCcCChhhccHHHHHh
Confidence            9999999999875 5788888888887776654211               111     1 1233333     3444457


Q ss_pred             cCccceecCCCCh
Q 021410          163 CGLATHYSVSEKL  175 (312)
Q Consensus       163 ~Glv~~vv~~~~l  175 (312)
                      .|+||.++++++.
T Consensus       232 ~G~iD~vv~~ee~  244 (263)
T d2f9yb1         232 KGAIDMIVRRPEM  244 (263)
T ss_dssp             GTCCSEECCHHHH
T ss_pred             CCCCCEEECCHHH
Confidence            8999999976554

>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=97.69  E-value=0.00036  Score=58.31  Aligned_cols=130  Identities=15%  Similarity=0.173  Sum_probs=82.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++...-..+..+.+.+.++. +-+|.+.-     |.|+.+.+-        ......+...+..+ ..+.. .+|+
T Consensus       101 ~GGS~g~~~~~K~~~a~e~A~~~~-lPlV~l~~-----sgG~r~~eg--------~~~l~~~~~~~~~~-~~ls~-~vP~  164 (253)
T d1on3a1         101 MGGSAGETQSTKVVETMEQALLTG-TPFLFFYD-----SGGARIQEG--------IDSLSGYGKMFFAN-VKLSG-VVPQ  164 (253)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEE-----ECSBCGGGT--------HHHHHHHHHHHHHH-HHHTT-TSCE
T ss_pred             hcccceecccchhhhhHHHHhhcC-CCeEEEEe-----cCCCccccc--------ceeccccceehHHH-HHHhc-cceE
Confidence            445677888888888888887654 44555544     455555431        11122222222222 23333 5999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHH-------HH
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE-------MM  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~e-------A~  161 (312)
                      |+++.|+|.||+.....+||++|+++++.+++.                    |+...+ ..+|+.++.+|       +.
T Consensus       165 i~vv~Gp~~GG~a~~~~~~d~vi~~~~a~i~~a--------------------GP~vVe-~~~ge~~~~eelGga~~h~~  223 (253)
T d1on3a1         165 IAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIK-SVTGEDVTADELGGAEAHMA  223 (253)
T ss_dssp             EEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHH-HHHCCCCCHHHHHSHHHHHH
T ss_pred             EEEEecCcccceeeccchhhheeccccceEEec--------------------Ccchhh-hhhCCcCChHhccCHHHhhh
Confidence            999999999999999999999999987665542                    111111 13566666543       34


Q ss_pred             HcCccceecCCCCh
Q 021410          162 ACGLATHYSVSEKL  175 (312)
Q Consensus       162 ~~Glv~~vv~~~~l  175 (312)
                      ..|.+|.++++++.
T Consensus       224 ~sG~iD~v~~~e~~  237 (253)
T d1on3a1         224 ISGNIHFVAEDDDA  237 (253)
T ss_dssp             TTCCCSEEESSHHH
T ss_pred             ccccceEEECCHHH
Confidence            57999999987654

>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=97.44  E-value=0.00052  Score=57.24  Aligned_cols=129  Identities=16%  Similarity=0.186  Sum_probs=82.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++......+.++++.+.+.. +-+|.+..     |.|..+.+-..        ....+.+ +..... ...-.+|+
T Consensus        98 ~gGs~g~~~~~K~~r~~e~A~~~~-~P~I~~~d-----sgG~r~~e~~~--------~l~~~~~-~~~~~~-~~s~~iP~  161 (251)
T d1vrga1          98 MGGSLGEMHAKKIVKLLDLALKMG-IPVIGIND-----SGGARIQEGVD--------ALAGYGE-IFLRNT-LASGVVPQ  161 (251)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEE-----ECSBCGGGTHH--------HHHHHHH-HHHHHH-HHTTTSCE
T ss_pred             hhcccchHHHHHHHHHHHHHHHcC-CCEEEEEc-----CCCcccccccc--------ccccchH-HHHHHH-HHCCCCCE
Confidence            445677777888888888777654 45566655     45666543211        1112222 122222 22457999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------H
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------M  161 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------~  161 (312)
                      |+++.|+|.||+......||++|+.++.      ..+++.             |+...+ ..+|+.++.+|.       .
T Consensus       162 I~vv~G~~~gG~a~~~~~~d~~im~~~~------a~i~~a-------------Gp~vv~-~~~ge~~~~eelGga~~h~~  221 (251)
T d1vrga1         162 ITVIAGPCAGGAVYSPALTDFIVMVDQT------ARMFIT-------------GPNVIK-AVTGEEISQEDLGGAMVHNQ  221 (251)
T ss_dssp             EEEEEEEEBGGGGHHHHHSSEEEEETTT------CBCBSS-------------CHHHHH-HHHCCCCCHHHHHBHHHHHH
T ss_pred             EEEEccCccccceehhhhCceEEEEccc------eeEEec-------------Cchhhh-hhcCCcCChHHccchhhhhh
Confidence            9999999999999999999999987643      112221             122122 257888888775       4


Q ss_pred             HcCccceecCCC
Q 021410          162 ACGLATHYSVSE  173 (312)
Q Consensus       162 ~~Glv~~vv~~~  173 (312)
                      +.|.+|.+++++
T Consensus       222 ~sG~~D~v~~de  233 (251)
T d1vrga1         222 KSGNAHFLADND  233 (251)
T ss_dssp             TSCCCSEEESSH
T ss_pred             ccccceEEECCH
Confidence            579999999865

>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.29  E-value=0.0025  Score=53.18  Aligned_cols=128  Identities=18%  Similarity=0.177  Sum_probs=82.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++......+.++++.+.++. +-+|.|.-.     .|+.+.+-..        ....+.. +......+ .-.+|+
T Consensus       100 ~gGS~g~~~~~K~~r~~e~A~~~~-lPlI~l~ds-----gGarm~e~~~--------~~~~~~~-~~~~~~~~-s~~vP~  163 (258)
T d1xnya1         100 FGGALGEVYGQKIVKVMDFALKTG-CPVVGINDS-----GGARIQEGVA--------SLGAYGE-IFRRNTHA-SGVIPQ  163 (258)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECC-----CSBCGGGTHH--------HHHHHHH-HHHHHHHT-TTTSCE
T ss_pred             hcCccchhhHHHHHHHHHHHHHcC-CceEEEecC-----CCcccCcccc--------cccchhH-HHHHHHHH-cCCCCE
Confidence            556788888888999998888754 566777664     4444443211        1111111 22222222 346999


Q ss_pred             EEEEccceecccceeecCCCeEEEeC-ceeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~-~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------  160 (312)
                      |+++.|+|.||+......||++|+.+ .+.+++.                    |+...+ ..+|+.++.+|+       
T Consensus       164 I~vv~G~~~gG~a~~~~~~~~vim~~~~a~i~~a--------------------GP~vv~-~~~ge~i~~eelgga~~h~  222 (258)
T d1xnya1         164 ISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK-TVTGEDVGFEELGGARTHN  222 (258)
T ss_dssp             EEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH-HHHCCCCCHHHHHBHHHHH
T ss_pred             EEEEcCCcChhHHHHHHhccchhhcccceEEEec--------------------CHHHHH-HHhcCccChHHhccHHHHH
Confidence            99999999999999999999988876 3333321                    222112 257888888774       


Q ss_pred             HHcCccceecCCC
Q 021410          161 MACGLATHYSVSE  173 (312)
Q Consensus       161 ~~~Glv~~vv~~~  173 (312)
                      ..-|++|.+++++
T Consensus       223 ~~sG~~d~v~~de  235 (258)
T d1xnya1         223 STSGVAHHMAGDE  235 (258)
T ss_dssp             HTSSCCSEEESSH
T ss_pred             hcCCeeEEEeCCH
Confidence            4579999999754

>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.28  E-value=0.0014  Score=54.68  Aligned_cols=128  Identities=16%  Similarity=0.188  Sum_probs=82.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-+++......+.++.+.+.++. +-+|.+.-     |+|+.+.+-.       . ....+.. +.... ......+|+
T Consensus       101 ~gGS~g~~~g~K~~ra~e~A~~~~-lP~I~l~d-----sgGar~~eg~-------~-~~~~~~~-~~~~~-~~~~~~vP~  164 (258)
T d2a7sa1         101 FGGSLGEVYGEKIVKVQELAIKTG-RPLIGIND-----GAGARIQEGV-------V-SLGLYSR-IFRNN-ILASGVIPQ  164 (258)
T ss_dssp             GGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEC-----CCSBCGGGCT-------H-HHHHHHH-HHHHH-HHHTTTSCE
T ss_pred             eCCccchhhhhHHHHHHHHHHhcC-CceEEEec-----cCCccccccc-------c-cccchhh-HHHHH-HHHcCCCCE
Confidence            456678888889999888887764 55666654     4555554311       1 1111111 22222 223457999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCc-eeEecCCCcccccCCCchHHHhhhcChHHHHHHHhcCCCCCHHHH-------
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-------  160 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~-a~f~~pe~~~G~~p~~g~~~~l~r~~g~~a~~l~ltg~~i~a~eA-------  160 (312)
                      |++|.|+|.||+......||++|+.++ +.+       ++.             |+...+ ..+|+.++.+|.       
T Consensus       165 I~~v~G~~~gG~a~~~~~~d~~vm~~~~a~i-------~~a-------------GP~vV~-~~~ge~~~~eeLGga~~h~  223 (258)
T d2a7sa1         165 ISLIMGAAAGGHVYSPALTDFVIMVDQTSQM-------FIT-------------GPDVIK-TVTGEEVTMEELGGAHTHM  223 (258)
T ss_dssp             EEEECSCCBSGGGHHHHHSSEEEEEBTTBBC-------BSS-------------CHHHHH-HHHCCCCCHHHHHBHHHHH
T ss_pred             EEEEecCcccHHHHHHHhccceEeecCceEE-------Ecc-------------ChhHHH-HhcCCccChhhccCHhHhh
Confidence            999999999999999999999998763 333       221             222112 247888887753       


Q ss_pred             HHcCccceecCCC
Q 021410          161 MACGLATHYSVSE  173 (312)
Q Consensus       161 ~~~Glv~~vv~~~  173 (312)
                      .+.|.+|.+++++
T Consensus       224 ~~sG~~D~v~~de  236 (258)
T d2a7sa1         224 AKSGTAHYAASGE  236 (258)
T ss_dssp             HTSCCCSEEESSH
T ss_pred             hhccccceEeCCH
Confidence            4579999999854

>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=97.24  E-value=0.00048  Score=58.55  Aligned_cols=151  Identities=14%  Similarity=0.059  Sum_probs=86.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcE
Q 021410            9 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH   88 (312)
Q Consensus         9 ~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~   88 (312)
                      +.-++++.....+.++++.+.+.. +-+|.|.-     |.|+.+..-......  ...   +.+.+ .-...+....+|+
T Consensus       116 ~gGs~~~~~~~K~~r~~~lA~~~~-lP~I~l~d-----s~Ga~~~~~~e~~~~--~~~---~g~~~-~~~a~ls~~~VP~  183 (287)
T d1pixa2         116 LAGAWVPGQAECLLRASDTAKTLH-VPLVYVLN-----CSGVKFDEQEKVYPN--RRG---GGTPF-FRNAELNQLGIPV  183 (287)
T ss_dssp             TTTEECTTHHHHHHHHHHHHHHHT-CCEEEEEC-----CCEECGGGHHHHSSS--TTS---TTHHH-HHHHHHHHTTCCE
T ss_pred             ccccchhhHHHHHHHHHHhhhhcC-CCEEEEec-----CCcccCCcchhhccc--hhh---HHHHH-HHHHHHhhcCCCe
Confidence            456788888888888888887653 55666654     445555432111100  000   01111 1123455678999


Q ss_pred             EEEEccceecccceeecCCCeEEEeCceeEecCC--CcccccCCCchHHHhhhcChHH-HHHHHhcCCCCCHHHHH--Hc
Q 021410           89 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE--TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMM--AC  163 (312)
Q Consensus        89 Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe--~~~G~~p~~g~~~~l~r~~g~~-a~~l~ltg~~i~a~eA~--~~  163 (312)
                      |++|-|.|.|||...+++||++++.+++.+.+.-  +--+..+..+........+... ...  .+-+.+.+.+.+  ..
T Consensus       184 Isvv~G~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~~~~~~~~~ei~~~~ge~--~~~eeLGGa~~H~~~s  261 (287)
T d1pixa2         184 IVGIYGTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRT--GKTEPPGAVDIHYTET  261 (287)
T ss_dssp             EEEECSEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHTT--CCCCCSSBHHHHTTTS
T ss_pred             EEEecCCccccceeccccceeEEecCCeEEEEECHHHhcccchhhhhhhhhHHHHHhhhccc--ccccccccHHHhhhhc
Confidence            9999999999998888888888888888776632  2222333222211111111111 111  234455555544  57


Q ss_pred             CccceecCCC
Q 021410          164 GLATHYSVSE  173 (312)
Q Consensus       164 Glv~~vv~~~  173 (312)
                      |.+|.+++++
T Consensus       262 G~~d~v~~~e  271 (287)
T d1pixa2         262 GFMREVYASE  271 (287)
T ss_dssp             CCSCEEESSH
T ss_pred             ccceeecCCH
Confidence            9999999864

>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.75  E-value=0.011  Score=49.29  Aligned_cols=152  Identities=16%  Similarity=0.191  Sum_probs=96.2

Q ss_pred             EecCCCC-CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410            3 ILNRPSA-LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL   81 (312)
Q Consensus         3 tln~p~~-~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (312)
                      .-|+|.. ..+++.+-.....+.++.++.. ++-+|.|.-. ..|..|.+-.             .....+...+++..+
T Consensus        75 ian~~~~~~G~~~~~~~~Ka~rfi~lc~~~-~iPlv~l~dt-pGf~~G~~~E-------------~~g~~~~ga~~~~a~  139 (271)
T d2a7sa2          75 VANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQE-------------YNGIIRRGAKLLYAY  139 (271)
T ss_dssp             EEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HHCHHHHHHHHHHHH
T ss_pred             EeccccccCCCcCHHHHHHHHHHHHHHHHh-CCceEEeech-hhhhhhccHH-------------HhhHHHHHHHHHHHH
Confidence            3466653 2579999999999999988764 4667777553 2344443222             223455566888899


Q ss_pred             hhCCCcEEEEEccceeccccee----ecCCCeEEEeCceeEecCCCcccccCCCchHHHhhh-cChH-----------H-
Q 021410           82 GTHLKPHVAILNGVTMGGGAGV----SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGH-----------L-  144 (312)
Q Consensus        82 ~~~~kp~Iaav~G~a~GgG~~l----al~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r-~~g~-----------~-  144 (312)
                      ..+.+|.|+.|-|.+.|+|...    .+.+|+++|.++++++       +.++-|+...+.+ .+..           . 
T Consensus       140 a~~~vP~isvi~~~~~G~~~~am~~~~~~~d~~~AwP~A~ig-------vMgpegaa~v~~~~~l~~~~~~~~~~~~~~~  212 (271)
T d2a7sa2         140 GEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLRL  212 (271)
T ss_dssp             HHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTTTTTTGGGTSSCCTTSSTT
T ss_pred             HhCCCCeEEEEeCCccchhhhhhcccccccceEEEecceeEe-------ecCHHHHHHHHHHHhhhhhhhcccchHHHHH
Confidence            9999999999999999987432    2346777766666554       4433333332322 2211           0 


Q ss_pred             HHHHHhcCCCCCHHHHHHcCccceecCCCChh
Q 021410          145 GEFLALTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       145 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      ....-+.-..-++..+.+.|++|.|+++.+..
T Consensus       213 ~~~~e~~e~~~~p~~aa~~g~iD~VIdP~dTR  244 (271)
T d2a7sa2         213 RLQQEYEDTLVNPYVAAERGYVDAVIPPSHTR  244 (271)
T ss_dssp             HHHHHHHTTTSBSHHHHHHTSSSEECCGGGHH
T ss_pred             HHHHHHHHHhcCHHHHHHcCCCCeeECHHHHH
Confidence            11111223334677888999999999987754

>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=96.20  E-value=0.012  Score=48.88  Aligned_cols=151  Identities=16%  Similarity=0.106  Sum_probs=94.3

Q ss_pred             ecCCCC-CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPSA-LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~~-~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      =|+|.. ..+++++-.....+.++.++.- ++-+|.|.=. ..|..|-+-.             .....+...+++.++.
T Consensus        73 an~~~~~~G~~~~~~a~Kaarfi~lc~~~-~iPlv~l~D~-pGf~~G~~~E-------------~~g~i~~ga~~~~a~a  137 (264)
T d1on3a2          73 ANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQE-------------YGGIIRHGAKMLYAYS  137 (264)
T ss_dssp             EECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHHHHH
T ss_pred             eccchhcccccChHHHHHHHHHHHHHHhc-CCceEEEecc-ccccccHHHH-------------HHHHHHHHHHHHHHHH
Confidence            456653 5678999999999999888874 4666766553 2344443322             2234566678889999


Q ss_pred             hCCCcEEEEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-C----hHHH--HH-H-H
Q 021410           83 THLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P----GHLG--EF-L-A  149 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~----g~~a--~~-l-~  149 (312)
                      ++.+|.|+.|=|.+.|+|..-..    ..|++++       .|-..+|..++-|+...+-+. +    ....  .+ + -
T Consensus       138 ~~~vP~itvi~rkayG~g~~am~g~~~~~d~~~a-------WP~A~~~vMg~Egaa~v~~~~el~a~~~~~~~~~~~~~e  210 (264)
T d1on3a2         138 EATVPKITVVLRKAYGGSYLAMCNRDLGADAVYA-------WPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEE  210 (264)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEE-------CTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHH
T ss_pred             cCCCCEEEEEeccccCccccccccccCChhheee-------HHhhHhhhccHHHHHHHHHhhhhhhhhhhhhhhHHHHHH
Confidence            99999999999999998754333    3455555       455555665544444433321 1    0000  00 0 0


Q ss_pred             hcCCCCCHHHHHHcCccceecCCCChh
Q 021410          150 LTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       150 ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      +.-+.-++..+.+.|.+|.|+++.+..
T Consensus       211 ~~~~~~~p~~aA~~g~iD~VIdP~eTR  237 (264)
T d1on3a2         211 YQNAFNTPYVAAARGQVDDVIDPADTR  237 (264)
T ss_dssp             HHHHHSSHHHHHHTTSSSEECCGGGHH
T ss_pred             HHHHhcCHHHHHHcCCCCeeECHHHHH
Confidence            111223567788899999999987754

>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=95.97  E-value=0.05  Score=45.86  Aligned_cols=148  Identities=16%  Similarity=0.044  Sum_probs=90.5

Q ss_pred             CCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHhhCCCcEE
Q 021410           10 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV   89 (312)
Q Consensus        10 ~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~I   89 (312)
                      .-+++.+-.....+.++.+++.. +-+|.|.=. ..|-.|-+-.             .....+...+++..+.++.+|.|
T Consensus        96 ~G~l~~~~a~K~~rfi~lc~~~~-iPlv~l~D~-pGf~~g~~~E-------------~~g~~r~ga~~~~a~~~~~VP~i  160 (299)
T d1pixa3          96 GGKLYRQGLVKMNEFVTLCARDR-LPIVWIQDT-TGIDVGNDAE-------------KAELLGLGQSLIYSIQTSHIPQF  160 (299)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHTT-CCEEEEECC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHTCCCCEE
T ss_pred             CCccCHHHHHHHHHHHHHHHHcC-CeEEEEEeC-CCcccchHHH-------------hhhHHHHHHHHHHHHHhhcceeE
Confidence            45688999999999999988753 556666442 2355443221             12244556678888999999999


Q ss_pred             EEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhh-hcChHH-----------H--HHHHh-
Q 021410           90 AILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHL-----------G--EFLAL-  150 (312)
Q Consensus        90 aav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~-r~~g~~-----------a--~~l~l-  150 (312)
                      +.|=|.+.|||.....    ..|+++     .+..|..++|+.++-++...+- +.+...           .  .++.- 
T Consensus       161 svi~r~~~G~a~~am~g~~~~~~~~~-----~~awP~aeigvMg~E~aa~vl~~~el~~~~~~~~~~~e~~e~~~~~~~~  235 (299)
T d1pixa3         161 EITLRKGTAAAHYVLGGPQGNDTNAF-----SIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA  235 (299)
T ss_dssp             EEECSEEETTHHHHTTCTTCTTTEEE-----EEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred             EEEecccccccccccccCccCcccce-----ecCCCccccccccchhhheeehhhhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence            9999999998854322    233332     1234556667665444443332 211100           0  11100 


Q ss_pred             cCCCCCHHHHHHcCccceecCCCChhH
Q 021410          151 TGAKLNGAEMMACGLATHYSVSEKLPL  177 (312)
Q Consensus       151 tg~~i~a~eA~~~Glv~~vv~~~~l~~  177 (312)
                      .-+.-++..+.+.|+||.|+++.+...
T Consensus       236 ~~~~~sp~~aAs~~~iD~IIDP~dTR~  262 (299)
T d1pixa3         236 FYTKSRPKVCAELGLVDEIVDMNKIRG  262 (299)
T ss_dssp             HHHTTSHHHHHHHTSSSEECCTTTHHH
T ss_pred             HHHhcCHHHHHHhCCcCeeECHHHHHH
Confidence            012347788899999999999988654

>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=95.85  E-value=0.02  Score=47.53  Aligned_cols=152  Identities=13%  Similarity=0.116  Sum_probs=94.2

Q ss_pred             EecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHH
Q 021410            3 ILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL   81 (312)
Q Consensus         3 tln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   81 (312)
                      .-|+|. ...+++.+-.....+.++.++.. ++-.|.|.-. ..|..|.+-.             .....+...+++..+
T Consensus        72 ian~~~~~~G~~~~~~a~Kaa~fi~lc~~~-~iPli~l~Dt-pGf~~G~~~E-------------~~g~~~~ga~~~~a~  136 (264)
T d1vrga2          72 VANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQE-------------HGGIIRHGAKLLYAY  136 (264)
T ss_dssp             EEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHHHH
T ss_pred             EeccccccccchhhhhHHHHHHHHHHHHHh-CCceEEEeec-ccccccHHHH-------------HHhHHHHHHHHHHHH
Confidence            345665 23569999999999999988865 3666666553 2344443222             123455667888999


Q ss_pred             hhCCCcEEEEEccceecccceee----cCCCeEEEeCceeEecCCCcccccCCCchHHHhhhc-C----hH-H-HHHH--
Q 021410           82 GTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P----GH-L-GEFL--  148 (312)
Q Consensus        82 ~~~~kp~Iaav~G~a~GgG~~la----l~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~-~----g~-~-a~~l--  148 (312)
                      .++.+|.|+.|=|.+.|+|..-.    +.+|++++-+++++       |+..+-++...+.+. +    .. . ...+  
T Consensus       137 a~~~vP~i~viir~~yG~g~~am~~~~~~~d~~~awP~a~~-------~vm~pe~aa~v~~~~~l~~~~~~~~~~~~~~~  209 (264)
T d1vrga2         137 SEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKLIE  209 (264)
T ss_dssp             HHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHH
T ss_pred             hcCCCCEEEEEeCCcccHHhhhccCCccCCCeeeeccceeE-------EecCHHHhhhhhhhhhhhhhhCcHHHHHHHHH
Confidence            99999999999999999875322    24777776655555       444333333333221 1    00 0 0000  


Q ss_pred             HhcCCCCCHHHHHHcCccceecCCCChh
Q 021410          149 ALTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       149 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      .+.-+.-++-.+...|++|.|+++.+..
T Consensus       210 ~~~e~~~~~~~aa~~g~iD~VIdP~dTR  237 (264)
T d1vrga2         210 EYKQQFANPYIAASRGYVDMVIDPRETR  237 (264)
T ss_dssp             HHHHHTSSHHHHHHTTSSSEECCGGGHH
T ss_pred             HHHHHhcCHHHHHHcCCCCeeECHHHHH
Confidence            0111223677888999999999987754

>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.52  E-value=0.0056  Score=52.46  Aligned_cols=37  Identities=14%  Similarity=0.073  Sum_probs=33.3

Q ss_pred             CCCcEEEEEccceecccceeecCCCeEEEeCceeEec
Q 021410           84 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT  120 (312)
Q Consensus        84 ~~kp~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~  120 (312)
                      -.+|+|++|.|.|+|+|..++..||++|+.+++.+.+
T Consensus       239 ~~iptis~v~G~~vG~gAyl~~L~d~vIm~~~s~i~l  275 (333)
T d1uyra1         239 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIIL  275 (333)
T ss_dssp             HHSCEEEEESSCEETHHHHHHHHTCCEEEETTCCEES
T ss_pred             CCCCEEEEEeCCccccceeecccccEEEEeCCceEEe
Confidence            4699999999999999999999999999999876543

>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.05  E-value=0.15  Score=42.05  Aligned_cols=149  Identities=15%  Similarity=0.150  Sum_probs=93.0

Q ss_pred             ecCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEeCCCceeccCCchhHHHhhccCChHHHHHHHHHHHHHHHHHh
Q 021410            4 LNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG   82 (312)
Q Consensus         4 ln~p~-~~Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   82 (312)
                      -|+|. ...+++++-.....+.++.++.. ++-+|.|.-. ..|-.|.+-.             .....+...+++..+.
T Consensus        71 a~~~~~~~G~~~~~~a~Ka~~fi~lc~~~-~iPli~l~d~-pGf~~G~~~E-------------~~g~~~~ga~~~~a~a  135 (263)
T d1xnya2          71 ANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDV-PGFLPGVDQE-------------HDGIIRRGAKLIFAYA  135 (263)
T ss_dssp             EECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHHHHH
T ss_pred             ecccceecCCcchhhHHHHHHHHHHHHHh-CCceEEeecc-cccccchhHH-------------HHhHHHHHHHHHHHHH
Confidence            45554 33579999999999999988875 3666666553 2244443222             2234566678889999


Q ss_pred             hCCCcEEEEEccceecccceeec----CCCeEEEeCceeEecCCCcccccCCCchHHHhhhcCh-----------HH-HH
Q 021410           83 THLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-----------HL-GE  146 (312)
Q Consensus        83 ~~~kp~Iaav~G~a~GgG~~lal----~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g-----------~~-a~  146 (312)
                      ++.+|.|+.|-|.+.|||.....    ..|+++|.++++++       +.++-|+...+-+.-.           .. ..
T Consensus       136 ~~~vPkitvi~~~~~Gga~~~m~~~~~~~d~~~awP~a~~g-------vm~pe~aa~il~~~~~~~a~~~~~~~~~~~~~  208 (263)
T d1xnya2         136 EATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAEATRARLIQ  208 (263)
T ss_dssp             HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHSCCTTCSSSHHHHHH
T ss_pred             ccCCCeEEEEecCccccceeccCCcccCCcEEEEcchhhhh-------ccCHHHHHHHHHHHHHhhhccchHHHHHHHHH
Confidence            99999999999999998754422    35777776666554       4433333333322100           00 11


Q ss_pred             HHHhcCCCCCHHHHHHcCccceecCCCChh
Q 021410          147 FLALTGAKLNGAEMMACGLATHYSVSEKLP  176 (312)
Q Consensus       147 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~  176 (312)
                      ++  .-...++..+...|++|.|+++.+..
T Consensus       209 ~~--~~~~~~p~~aA~~g~iD~VIdP~dTR  236 (263)
T d1xnya2         209 EY--EDALLNPYTAAERGYVDAVIMPSDTR  236 (263)
T ss_dssp             HH--HHHHSSSHHHHHHTSSSEECCGGGHH
T ss_pred             HH--HHHhcCHHHHHHcccCCcccCHHHHH
Confidence            11  01123566788899999999988764

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.70  E-value=0.38  Score=39.31  Aligned_cols=125  Identities=11%  Similarity=0.063  Sum_probs=74.3

Q ss_pred             CeEEEeCceeEecCCCcccc--cCCC-ch-----HHHhhhcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHH
Q 021410          108 TFRVACGKTVFATPETLIGF--HPDA-GA-----SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI  178 (312)
Q Consensus       108 D~~ia~~~a~f~~pe~~~G~--~p~~-g~-----~~~l~r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~  178 (312)
                      |-+++-+..++++.-...|.  +|.. |.     ..+..+.+... |.++.+--+.++.++.           .+++.+.
T Consensus       129 ~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l-----------~~~~~~~  197 (266)
T d1hzda_         129 SAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQE-----------GDAAYRK  197 (266)
T ss_dssp             TCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTT-----------SCHHHHH
T ss_pred             CcEEeecccceeecCCccceeeehhhhHHHHHHhhhccCCccCHHHhhcccccccccChhhh-----------hhHHHHH
Confidence            45566667776654322222  2211 11     11223444555 7888777666655432           1234455


Q ss_pred             HHHH-hhhhcCCHHHHHHHHHHhccccCCCcc-hhhhHHHHHHhhcC-CCCHHHHHHHHHcccCCCCc
Q 021410          179 EEEL-GKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFG-LDTVEEIIDSLESEASLIND  243 (312)
Q Consensus       179 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~  243 (312)
                      +..+ .++...+|.+++..|+.++........ .+......+..++. .+..|++.++++||.|.+..
T Consensus       198 a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~G  265 (266)
T d1hzda_         198 ALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKG  265 (266)
T ss_dssp             HHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCCCC
T ss_pred             HHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5555 677889999999999998766543322 33334566777885 55667778889999876643

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=80.49  E-value=0.5  Score=38.50  Aligned_cols=89  Identities=10%  Similarity=-0.003  Sum_probs=58.0

Q ss_pred             hcChHH-HHHHHhcCCCCCHHHHHHcCccceecCCCChhHHHHHHhhhhcCCHHHHHHHHHHhccccCCCcchhhhHHHH
Q 021410          139 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI  217 (312)
Q Consensus       139 r~~g~~-a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (312)
                      +.+... |.++.+--+.++.++..+           +..+.++.+   +..+|.+++..|+.++................
T Consensus       172 ~~i~a~eA~~~Glv~~vv~~~~l~~-----------~a~~~a~~l---a~~~~~al~~~K~~l~~~~~~~~~~~~~e~~~  237 (263)
T d1wz8a1         172 EPLTGEEAERLGLVALAVEDEKVYE-----------KALEVAERL---AQGPKEALHHTKHALNHWYRSFLPHFELSLAL  237 (263)
T ss_dssp             CCEEHHHHHHHTSSSEEECGGGHHH-----------HHHHHHHHH---HTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             cccchhHHHhcCCcccccchhhhhH-----------HHHHHHHHh---hccHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            344555 888888778888776554           223345544   45689999999988765543333344444555


Q ss_pred             HHhhcC-CCCHHHHHHHHHcccCCC
Q 021410          218 VDKCFG-LDTVEEIIDSLESEASLI  241 (312)
Q Consensus       218 ~~~~~~-~~~~~~~~~~l~~~~~~~  241 (312)
                      ...++. .+..|++.+++|||.|.+
T Consensus       238 ~~~~~~s~d~~Egi~Af~eKR~P~f  262 (263)
T d1wz8a1         238 EFLGFSGKELEEGLKALKEKRPPEF  262 (263)
T ss_dssp             HHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred             HHHHccCHHHHHHHHHHhCCCCCCC
Confidence            666674 566677888899997654