Citrus Sinensis ID: 021414

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
ccccccccEEEEcccccccccccccccccccHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEcccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEEEEEEEccEEEEEEcccccccccccc
cccccccccEEccccHccHccccccccccEEEEEcccccccccHcccccEEccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccEEEEEEccccccHHHHcccccccEEEEEEHHHccccccccccHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHcccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEEEEEc
mstasinnWCLTSVSQAQSSliksstlrpsivarlnspasppslirnepvfaapapiinpnwredmaNQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAqlqtpsdtkafdSVERIKEGFIHFkrekyeknpALYSELakgqspkymvfacsdsrvcpshvldfqpgeafvvrnvanivppydqtkyagVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMsftfdgnnstdfiedwvltehgdkpfgdqctycekeAVNVSlsnlltypfvreGLVNKTLALKGGYYDFVNGSFElwgldfslspplsv
mstasinnwcLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEqitaqlqtpsdtkafdsVERIKEGfihfkrekyekNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLdfslspplsv
MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYeeaiealkkllkekedlkPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKyagvgaaveyavLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*******NWCLT*************************************VFAAPAPIINPNW***************************************************SVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFS*******
********WC******************************************APAP************************************************************RIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLS*
MSTASINNWCLTSV**********STLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
*************************TLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWRxxxxxxxxxxxxxxxxxxxxxxxxxKPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
P27141321 Carbonic anhydrase, chlor N/A no 0.987 0.959 0.716 1e-127
P27140347 Carbonic anhydrase, chlor yes no 0.996 0.896 0.709 1e-126
P16016319 Carbonic anhydrase, chlor N/A no 0.967 0.946 0.694 1e-123
P17067328 Carbonic anhydrase, chlor N/A no 0.993 0.945 0.681 1e-122
P46510330 Carbonic anhydrase OS=Fla N/A no 0.977 0.924 0.682 1e-119
P46511330 Carbonic anhydrase OS=Fla N/A no 0.871 0.824 0.740 1e-119
P46512330 Carbonic anhydrase 1 OS=F N/A no 0.871 0.824 0.740 1e-118
P46281329 Carbonic anhydrase OS=Fla N/A no 0.875 0.829 0.725 1e-118
P42737259 Carbonic anhydrase 2, chl no no 0.791 0.953 0.756 1e-111
P46513190 Carbonic anhydrase 2 (Fra N/A no 0.570 0.936 0.696 2e-73
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  454 bits (1167), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/325 (71%), Positives = 264/325 (81%), Gaps = 17/325 (5%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPS---LIRNEPVFAAPAPI 57
           MSTASIN+ CLT +S AQ+SL K +  RP   ARL++ +S  S   LIRNEPVFAAP PI
Sbjct: 1   MSTASINS-CLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPI 56

Query: 58  INPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVER 117
           INP  RE+MA +SYE+AI AL+KLL EK +L P+AAA+V+QITA+LQ+   +K FD VE 
Sbjct: 57  INPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEH 116

Query: 118 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNV 177
           +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+
Sbjct: 117 MKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNI 176

Query: 178 ANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIE 237
           AN+VP YD+T+Y+GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMS   DG+ ST FIE
Sbjct: 177 ANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIE 236

Query: 238 DWVLT----------EHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKG 287
           DWV            EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKG
Sbjct: 237 DWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKG 296

Query: 288 GYYDFVNGSFELWGLDFSLSPPLSV 312
           G+YDFVNG FELWGL+F LSP LSV
Sbjct: 297 GHYDFVNGGFELWGLEFGLSPSLSV 321
Reversible hydration of carbon dioxide.
Nicotiana tabacum (taxid: 4097)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Back     alignment and function description
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2 Back     alignment and function description
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Back     alignment and function description
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Back     alignment and function description
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Back     alignment and function description
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Back     alignment and function description
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
339958979321 chloroplast carbonic anhydrase [Dimocarp 0.996 0.968 0.816 1e-150
1354517320 carbonic anhydrase [Populus tremula x Po 0.987 0.962 0.759 1e-137
1354515320 carbonic anhydrase [Populus tremula x Po 0.987 0.962 0.756 1e-137
118489443321 unknown [Populus trichocarpa x Populus d 0.990 0.962 0.753 1e-137
225452452335 PREDICTED: carbonic anhydrase, chloropla 0.996 0.928 0.735 1e-137
224055529332 predicted protein [Populus trichocarpa] 0.990 0.930 0.753 1e-136
255567325326 carbonic anhydrase, putative [Ricinus co 0.996 0.953 0.746 1e-136
112292669324 chloroplast carbonic anhydrase [Pachysan 0.996 0.959 0.732 1e-131
20502881326 carbonic anhydrase [Gossypium hirsutum] 0.993 0.950 0.719 1e-129
387157286321 carbonic anhydrase, partial [Solanum tub 0.987 0.959 0.72 1e-128
>gi|339958979|gb|AEK25173.1| chloroplast carbonic anhydrase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/322 (81%), Positives = 283/322 (87%), Gaps = 11/322 (3%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINP 60
           MSTASIN+  LTS+  +QSSL K +TLRP+I ARLNS  SPPSLIRNEPVFAAPAPIINP
Sbjct: 1   MSTASINSCSLTSLFSSQSSL-KRATLRPTISARLNSSPSPPSLIRNEPVFAAPAPIINP 59

Query: 61  NWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPSDTKAFDSVERIKE 120
            WREDMAN+SYEEAIEALKKLL EK++LKPVAAAKVEQITAQLQT +D K FD+VER+K+
Sbjct: 60  TWREDMANKSYEEAIEALKKLLSEKDELKPVAAAKVEQITAQLQTTADGKPFDAVERMKD 119

Query: 121 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 180
           GFIHFKREKYEKNPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVANI
Sbjct: 120 GFIHFKREKYEKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANI 179

Query: 181 VPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDW- 239
           VPPYDQ KYAGVGAAVEYAVLHLKV  IVVIGHSACGGIKGLMSFTF+G NSTDFIEDW 
Sbjct: 180 VPPYDQIKYAGVGAAVEYAVLHLKVQEIVVIGHSACGGIKGLMSFTFEGANSTDFIEDWV 239

Query: 240 ---------VLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYY 290
                    VL EHG  PF  QCTYCEK AV+VS+ NLL+YPFVR+GLV KTLALKGGYY
Sbjct: 240 KIGLPAKGSVLAEHGGVPFEQQCTYCEKAAVSVSIGNLLSYPFVRDGLVKKTLALKGGYY 299

Query: 291 DFVNGSFELWGLDFSLSPPLSV 312
           DFVNGSFELW ++F LSPPLSV
Sbjct: 300 DFVNGSFELWSVEFGLSPPLSV 321

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|1354517|gb|AAB65822.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|1354515|gb|AAC49785.1| carbonic anhydrase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|118489443|gb|ABK96524.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|225452452|ref|XP_002277957.1| PREDICTED: carbonic anhydrase, chloroplastic [Vitis vinifera] gi|296087661|emb|CBI34917.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224055529|ref|XP_002298524.1| predicted protein [Populus trichocarpa] gi|222845782|gb|EEE83329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255567325|ref|XP_002524642.1| carbonic anhydrase, putative [Ricinus communis] gi|223536003|gb|EEF37661.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|112292669|gb|ABI14813.1| chloroplast carbonic anhydrase [Pachysandra terminalis] Back     alignment and taxonomy information
>gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|387157286|dbj|BAM15483.1| carbonic anhydrase, partial [Solanum tuberosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
TAIR|locus:2084198347 CA1 "carbonic anhydrase 1" [Ar 1.0 0.899 0.633 1e-100
TAIR|locus:2185460331 CA2 "carbonic anhydrase 2" [Ar 0.791 0.746 0.656 1.3e-84
TAIR|locus:2016109280 BCA4 "beta carbonic anhydrase 0.785 0.875 0.521 1.3e-66
TAIR|locus:2034797258 BCA3 "beta carbonic anhydrase 0.788 0.953 0.496 1.1e-62
TAIR|locus:2134218302 BCA5 "beta carbonic anhydrase 0.628 0.649 0.429 8.7e-40
TAIR|locus:2196292290 BCA6 "beta carbonic anhydrase 0.634 0.682 0.385 2.8e-34
TIGR_CMR|GSU_2307211 GSU_2307 "carbonic anhydrase" 0.576 0.853 0.369 1.9e-26
TIGR_CMR|CBU_0139206 CBU_0139 "carbonic anhydrase" 0.596 0.902 0.345 6.6e-26
UNIPROTKB|P0ABE9219 cynT "carbonic anhydrase monom 0.567 0.808 0.341 9e-22
TIGR_CMR|CJE_0288211 CJE_0288 "carbonic anhydrase" 0.599 0.886 0.33 1e-20
TAIR|locus:2084198 CA1 "carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
 Identities = 213/336 (63%), Positives = 236/336 (70%)

Query:     1 MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
             MSTA ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNE
Sbjct:     1 MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60

Query:    49 PVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--P 106
             PVFAAPAPII P W E+M  ++Y                   VAAAKVEQITA LQT   
Sbjct:    61 PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120

Query:   107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
             SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF
Sbjct:   121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180

Query:   167 QPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFT 226
             QPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSF 
Sbjct:   181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFP 240

Query:   227 FDGNNSTDFIEDWV----------LTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVRE 276
              DGNNSTDFIEDWV          ++E GD  F DQC  CE+EAVNVSL+NLLTYPFVRE
Sbjct:   241 LDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVRE 300

Query:   277 GLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 312
             GLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct:   301 GLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336
GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0015976 "carbon utilization" evidence=IEA;ISS
GO:0009579 "thylakoid" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009535 "chloroplast thylakoid membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0010319 "stromule" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP;RCA
GO:0016020 "membrane" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IDA
GO:0010037 "response to carbon dioxide" evidence=IGI
GO:0010119 "regulation of stomatal movement" evidence=IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0006098 "pentose-phosphate shunt" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009814 "defense response, incompatible interaction" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019684 "photosynthesis, light reaction" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2185460 CA2 "carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016109 BCA4 "beta carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034797 BCA3 "beta carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134218 BCA5 "beta carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196292 BCA6 "beta carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2307 GSU_2307 "carbonic anhydrase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0139 CBU_0139 "carbonic anhydrase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P0ABE9 cynT "carbonic anhydrase monomer" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0288 CJE_0288 "carbonic anhydrase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P16016CAHC_SPIOL4, ., 2, ., 1, ., 10.69490.96790.9467N/Ano
P46512CAH1_FLALI4, ., 2, ., 1, ., 10.74030.87170.8242N/Ano
P46510CAHX_FLABI4, ., 2, ., 1, ., 10.68230.97750.9242N/Ano
P46511CAHX_FLABR4, ., 2, ., 1, ., 10.74030.87170.8242N/Ano
P17067CAHC_PEA4, ., 2, ., 1, ., 10.68180.99350.9451N/Ano
P46281CAHX_FLAPR4, ., 2, ., 1, ., 10.72530.8750.8297N/Ano
P27140CAHC_ARATH4, ., 2, ., 1, ., 10.70910.99670.8962yesno
P27141CAHC_TOBAC4, ., 2, ., 1, ., 10.71690.98710.9595N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.983
4th Layer4.2.1.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00020732001
RecName- Full=Carbonic anhydrase; EC=4.2.1.1; (324 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020318001
SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_2, whole genome shotgu [...] (164 aa)
•    •• 0.917
GSVIVG00003051001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (814 aa)
      • 0.512
PsbP2
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (238 aa)
   •  • 0.508
GSVIVG00030064001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (778 aa)
      • 0.507
GSVIVG00024166001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (842 aa)
      • 0.506
GSVIVG00021049001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in ca [...] (760 aa)
      • 0.506

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
PLN03014347 PLN03014, PLN03014, carbonic anhydrase 1e-161
PLN03019330 PLN03019, PLN03019, carbonic anhydrase 1e-130
PLN00416258 PLN00416, PLN00416, carbonate dehydratase 1e-117
cd00884190 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) 5e-96
PLN03006301 PLN03006, PLN03006, carbonate dehydratase 2e-56
smart00947154 smart00947, Pro_CA, Carbonic anhydrase 2e-53
PLN02154290 PLN02154, PLN02154, carbonic anhydrase 3e-50
pfam00484149 pfam00484, Pro_CA, Carbonic anhydrase 2e-49
cd00382119 cd00382, beta_CA, Carbonic anhydrases (CA) are zin 3e-47
COG0288207 COG0288, CynT, Carbonic anhydrase [Inorganic ion t 9e-45
cd00883182 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) 7e-35
cd03378154 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) 5e-24
PRK10437220 PRK10437, PRK10437, carbonic anhydrase; Provisiona 4e-18
cd03379142 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) 5e-08
PRK15219245 PRK15219, PRK15219, carbonic anhydrase; Provisiona 5e-07
>gnl|CDD|178588 PLN03014, PLN03014, carbonic anhydrase Back     alignment and domain information 
 Score =  452 bits (1163), Expect = e-161
 Identities = 238/336 (70%), Positives = 264/336 (78%), Gaps = 24/336 (7%)

Query: 1   MSTASINNWCLTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNE 48
           MSTA ++ + LTS+S +QSSL K S    S VA L            +S  S P+LIRNE
Sbjct: 1   MSTAPLSGFFLTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNE 60

Query: 49  PVFAAPAPIINPNWREDMANQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQT--P 106
           PVFAAPAPII P W E+M  ++Y+EAIEALKKLL EKE+LK VAAAKVEQITA LQT   
Sbjct: 61  PVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTS 120

Query: 107 SDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDF 166
           SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF
Sbjct: 121 SDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDF 180

Query: 167 QPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFT 226
           QPG+AFVVRN+AN+VPP+D+ KY GVGAA+EYAVLHLKV NIVVIGHSACGGIKGLMSF 
Sbjct: 181 QPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFP 240

Query: 227 FDGNNSTDFIEDW----------VLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVRE 276
            DGNNSTDFIEDW          V++E GD  F DQC  CE+EAVNVSL+NLLTYPFVRE
Sbjct: 241 LDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVRE 300

Query: 277 GLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 312
           GLV  TLALKGGYYDFV G+FELWGL+F LS   SV
Sbjct: 301 GLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336

Length = 347
>gnl|CDD|166660 PLN03019, PLN03019, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177809 PLN00416, PLN00416, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|238449 cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|178583 PLN03006, PLN03006, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|214929 smart00947, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215111 PLN02154, PLN02154, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|215941 pfam00484, Pro_CA, Carbonic anhydrase Back     alignment and domain information
>gnl|CDD|238224 cd00382, beta_CA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|223365 COG0288, CynT, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|238448 cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|239473 cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|182460 PRK10437, PRK10437, carbonic anhydrase; Provisional Back     alignment and domain information
>gnl|CDD|239474 cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>gnl|CDD|237927 PRK15219, PRK15219, carbonic anhydrase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
PLN03014347 carbonic anhydrase 100.0
PLN03019330 carbonic anhydrase 100.0
PLN00416258 carbonate dehydratase 100.0
PLN03006301 carbonate dehydratase 100.0
PLN02154290 carbonic anhydrase 100.0
cd00884190 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-c 100.0
PRK10437220 carbonic anhydrase; Provisional 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 100.0
PRK15219245 carbonic anhydrase; Provisional 100.0
cd00883182 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-c 100.0
COG0288207 CynT Carbonic anhydrase [Inorganic ion transport a 100.0
cd03378154 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-c 100.0
cd00382119 beta_CA Carbonic anhydrases (CA) are zinc-containi 100.0
PF00484153 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Ca 100.0
cd03379142 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-c 100.0
KOG1578276 consensus Predicted carbonic anhydrase involved in 98.41
>PLN03014 carbonic anhydrase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-96  Score=705.74  Aligned_cols=311  Identities=77%  Similarity=1.191  Sum_probs=284.1

Q ss_pred             CCcccccceeecccccccccccccCCCCc-eEEEeec------------CCCCCCCcccCCccccCCCcccCcchhhHhh
Q 021414            1 MSTASINNWCLTSVSQAQSSLIKSSTLRP-SIVARLN------------SPASPPSLIRNEPVFAAPAPIINPNWREDMA   67 (312)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (312)
                      |||++|||||+||++++++++++ .++|| ++||+|+            |+++||+||||+||||||+|||||+|+|||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~   79 (347)
T PLN03014          1 MSTAPLSGFFLTSLSPSQSSLQK-LSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMG   79 (347)
T ss_pred             CccccccceeccccCcccccccc-cccCCcceEEEeccccccccccCCCCCCCCchhhcCCccccCCCcccCchhHhhhc
Confidence            99999999999999999999977 78899 8999996            1133899999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhhhhcCcchhHhhhhHHHHHhhcCCC--CCChHHHHHHHHHHHHHHHhhhccCChhhHHhhhcCCC
Q 021414           68 NQSYEEAIEALKKLLKEKEDLKPVAAAKVEQITAQLQTPS--DTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQS  145 (312)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~~t~~l~~~~--~~~p~~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~  145 (312)
                      ++|||+||++|+|||+||++|+++|++||+++|+||++..  .+.+++++++|++||++|+++.+..++++|+++++||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lerL~~GN~rF~~~~~~~~~~~~~~La~GQ~  159 (347)
T PLN03014         80 TEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQS  159 (347)
T ss_pred             hhhHHHHHHHHHhhcccccccchHHHHhHHHHHHHHhcccCCCCCCcCHHHHHHHHHHHHHhhccccCHHHHHhhccCCC
Confidence            9999999999999999999999999999999999998632  35689999999999999999999999999999999999


Q ss_pred             CcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCccchhhHHHHHHHHHhcCcceEEEeccCCcchhhhcccc
Q 021414          146 PKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSF  225 (312)
Q Consensus       146 PkalVItCsDSRV~Pe~il~~~pGD~FVvRNaGN~V~~~d~~~~~~v~aSLEyAV~~L~Vk~IVV~GHSdCGai~Aa~~~  225 (312)
                      |+++||+||||||+|+.+||++|||+||+||+||+|+++|...|++++++|||||.+|||++|||||||+||||+|+++.
T Consensus       160 P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~~~  239 (347)
T PLN03014        160 PKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSF  239 (347)
T ss_pred             CCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhCCCEEEEeCCCCchHHHHHHhc
Confidence            99999999999999999999999999999999999999876556678899999999999999999999999999999876


Q ss_pred             ccCCCCCchhHHHHHhh----------hcCCCCcccccchhHHHHHHHHHHHhhcChHHHhhhhCCceEEEEEEEEccCC
Q 021414          226 TFDGNNSTDFIEDWVLT----------EHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG  295 (312)
Q Consensus       226 ~~~g~~~~~~I~~wl~~----------~~~~l~~~e~~~~~e~~nV~~qv~~L~~~P~v~~~v~~g~L~V~G~vYDi~TG  295 (312)
                      .+++....++|+.|+..          +.....+.+++..++++||++||++|++||+|++++++|+|.||||+||++||
T Consensus       240 ~~~g~~~~~~I~~wl~~i~pA~~~v~~~~~~~~~~d~~~~~ekeNV~~qV~nL~t~P~V~eav~~G~L~I~G~~YDi~TG  319 (347)
T PLN03014        240 PLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKG  319 (347)
T ss_pred             cccccccchhHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCc
Confidence            55555556899999842          12333455666778899999999999999999999999999999999999999


Q ss_pred             eEEEEeccCCCCCCCCC
Q 021414          296 SFELWGLDFSLSPPLSV  312 (312)
Q Consensus       296 ~v~~v~~~~~~~~~~~~  312 (312)
                      +|++|+.+++++|++++
T Consensus       320 ~V~~l~~~~~~~~~~~~  336 (347)
T PLN03014        320 AFELWGLEFGLSETSSV  336 (347)
T ss_pred             eEEEeccccccCCcccc
Confidence            99999999999999875

>PLN03019 carbonic anhydrase Back     alignment and domain information
>PLN00416 carbonate dehydratase Back     alignment and domain information
>PLN03006 carbonate dehydratase Back     alignment and domain information
>PLN02154 carbonic anhydrase Back     alignment and domain information
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PRK10437 carbonic anhydrase; Provisional Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15219 carbonic anhydrase; Provisional Back     alignment and domain information
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4 Back     alignment and domain information
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1ekj_A221 The X-Ray Crystallographic Structure Of Beta Carbon 2e-89
1ddz_A 496 X-Ray Structure Of A Beta-Carbonic Anhydrase From T 8e-14
3qy1_A223 1.54a Resolution Crystal Structure Of A Beta-Carbon 1e-13
2w3q_A243 Structure And Inhibition Of The Co2-Sensing Carboni 1e-13
2w3n_A239 Structure And Inhibition Of The Co2-Sensing Carboni 1e-13
3e3g_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant G41a 2e-13
3e24_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant W39f 4e-13
3e28_A229 H. Influenzae Beta-carbonic Anhydrase, Variant Y181 6e-13
2a8c_A229 Haemophilus Influenzae Beta-Carbonic Anhydrase Leng 6e-13
3mf3_A221 Cobalt(Ii)-Substituted Haemophilus Influenzae B-Car 6e-13
1i6p_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 2e-12
1i6o_A220 Crystal Structure Of E. Coli Beta Carbonic Anhydras 2e-12
3e2x_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant V47a 2e-12
3e1v_A229 H. Influenzae Beta-Carbonic Anhydrase, Variant D44n 2e-12
3ucj_A227 Coccomyxa Beta-Carbonic Anhydrase In Complex With A 7e-12
3eyx_A216 Crystal Structure Of Carbonic Anhydrase Nce103 From 2e-09
1ym3_A215 Crystal Structure Of Carbonic Anhydrase Rv3588c Fro 1e-07
2a5v_A213 Crystal Structure Of M. Tuberculosis Beta Carbonic 1e-07
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic Anhydrase From The C3 Dicot Pisum Sativum Length = 221 Back     alignment and structure 
Iteration: 1

 Score =  325 bits (834), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 155/210 (73%), Positives = 168/210 (80%), Gaps = 10/210 (4%)
Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 172
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 12  EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 71
Query: 173 VVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 232
           VVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 72  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 131
Query: 233 TDFIEDW----------VLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 282
           TDFIE+W          V  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 132 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 191
Query: 283 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 312
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 192 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red Alga, Porphyridium Purpureum R-1 Length = 496 Back     alignment and structure
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic Anhydrase From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 Length = 223 Back     alignment and structure
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 243 Back     alignment and structure
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic Anhydrase Can2 From The Pathogenic Fungus Cryptococcus Neoformans Length = 239 Back     alignment and structure
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a Length = 229 Back     alignment and structure
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f Length = 229 Back     alignment and structure
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f Length = 229 Back     alignment and structure
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Length = 229 Back     alignment and structure
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic Anhydrase Length = 221 Back     alignment and structure
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase (Ecca) Length = 220 Back     alignment and structure
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a Length = 229 Back     alignment and structure
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n Length = 229 Back     alignment and structure
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Acetazolamide Length = 227 Back     alignment and structure
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From Saccharomyces Cerevisiae Length = 216 Back     alignment and structure
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From Mycobacterium Tuberculosis Length = 215 Back     alignment and structure
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic Anhydrase, Rv3588c, Tetrameric Form Length = 213 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 4e-95
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 1e-77
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 7e-77
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 1e-75
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 2e-74
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 9e-74
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 3e-71
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 3e-69
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 5e-66
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 1e-37
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 6e-31
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 2e-29
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 2e-29
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Length = 221 Back     alignment and structure
 Score =  279 bits (716), Expect = 4e-95
 Identities = 165/218 (75%), Positives = 180/218 (82%), Gaps = 10/218 (4%)

Query: 105 TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVL 164
           +       ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVL
Sbjct: 4   SSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVL 63

Query: 165 DFQPGEAFVVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMS 224
           DFQPGEAFVVRNVAN+VPPYDQ KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+S
Sbjct: 64  DFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLS 123

Query: 225 FTFDGNNSTDFIEDW----------VLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFV 274
           F FDG  STDFIE+W          V  +HGD PF + CT+CEKEAVN SL NLLTYPFV
Sbjct: 124 FPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFV 183

Query: 275 REGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV 312
           REGLVNKTLALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 184 REGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 221
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Length = 243 Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Length = 223 Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Length = 216 Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Length = 227 Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Length = 229 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Length = 496 Back     alignment and structure
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Length = 215 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Length = 170 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Length = 204 Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} Length = 166 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Length = 172 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
1ekj_A221 Beta-carbonic anhydrase; rossman fold domain, stra 100.0
1ym3_A215 Carbonic anhydrase (carbonate dehydratase) (carbo 100.0
3qy1_A223 Carbonic anhydrase; structural genomics, center fo 100.0
2w3q_A243 Carbonic anhydrase 2; lyase, inhibition, sulfonami 100.0
3e3i_A229 Carbonic anhydrase 2, beta carbonic anhydrase; all 100.0
3eyx_A216 Carbonic anhydrase; rossmann fold, cytoplasm, lyas 100.0
3ucj_A227 Carbonic anhydrase; alpha/beta, strand exchange, l 100.0
1ddz_A 496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ddz_A496 Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A 100.0
1ylk_A172 Hypothetical protein RV1284/MT1322; homodimer, alp 100.0
3las_A166 Putative carbonic anhydrase; zinc binding, LYAS; H 100.0
1g5c_A170 Beta-carbonic anhydrase; zinc, hepes, lyase; HET: 100.0
3teo_A204 Carbon disulfide hydrolase; beta carbonic anhydras 100.0
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1 Back     alignment and structure
Probab=100.00  E-value=4.2e-59  Score=425.07  Aligned_cols=204  Identities=81%  Similarity=1.347  Sum_probs=180.0

Q ss_pred             CChHHHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCcc
Q 021414          109 TKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTK  188 (312)
Q Consensus       109 ~~p~~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~PkalVItCsDSRV~Pe~il~~~pGD~FVvRNaGN~V~~~d~~~  188 (312)
                      ++|++++++|++||++|+++++..++++|++|++||+|+++||+||||||+|+.+||++|||+||+||+||+|+++|.+.
T Consensus         8 ~~p~~~l~~L~~gN~~f~~~~~~~~~~~~~~La~gQ~P~~lvi~CsDSRV~pe~i~~~~pGdlFVvRNaGN~V~~~d~~~   87 (221)
T 1ekj_A            8 IPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAK   87 (221)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHhcCcccCHHHHHhhccCCCCcEEEEEeCCCCCCHHHHhCCCCCcEEEEeccCcccCcccccc
Confidence            68999999999999999999988899999999999999999999999999999999999999999999999999987654


Q ss_pred             chhhHHHHHHHHHhcCcceEEEeccCCcchhhhccccccCCCCCchhHHHHHhhh----------cCCCCcccccchhHH
Q 021414          189 YAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTE----------HGDKPFGDQCTYCEK  258 (312)
Q Consensus       189 ~~~v~aSLEyAV~~L~Vk~IVV~GHSdCGai~Aa~~~~~~g~~~~~~I~~wl~~~----------~~~l~~~e~~~~~e~  258 (312)
                      ++++++||||||.+|||++|||||||+||||+|+++..+.+....++++.|+...          ...+++.+++..+++
T Consensus        88 ~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~~~~~~~~~~~~~i~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (221)
T 1ekj_A           88 YAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEK  167 (221)
T ss_dssp             CHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHhcCCCEEEEEccCCCCceeeecccccccccchHHHHHHHHhhhhHHHHHHhhccCCCHHHHHHHHHH
Confidence            5578899999999999999999999999999999876655544567999998421          223333344566788


Q ss_pred             HHHHHHHHHhhcChHHHhhhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 021414          259 EAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  312 (312)
Q Consensus       259 ~nV~~qv~~L~~~P~v~~~v~~g~L~V~G~vYDi~TG~v~~v~~~~~~~~~~~~  312 (312)
                      +||+.|+++|++||+|++++++|+|.||||+||+.||++++|++++..+++++|
T Consensus       168 ~nV~~~v~~L~~~p~v~~~~~~g~l~v~G~~ydi~tG~v~~~~~~~~~~~~~~~  221 (221)
T 1ekj_A          168 EAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  221 (221)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHHHHHhCHHHHHHHHcCCcEEEEEEEECCCCeEEEEecCCCCCccccC
Confidence            999999999999999999999999999999999999999999999999999986
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A Back     alignment and structure
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A Back     alignment and structure
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A Back     alignment and structure
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A Back     alignment and structure
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae} Back     alignment and structure
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium purpureum} SCOP: c.53.2.1 c.53.2.1 Back     alignment and structure
>1ylk_A Hypothetical protein RV1284/MT1322; homodimer, alpha/beta-fold, structural proteomics in spine, structural genomics, unknown function; 2.00A {Mycobacterium tuberculosis} Back     alignment and structure
>3las_A Putative carbonic anhydrase; zinc binding, LYAS; HET: GOL; 1.40A {Streptococcus mutans} SCOP: c.53.2.0 Back     alignment and structure
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1 Back     alignment and structure
>3teo_A Carbon disulfide hydrolase; beta carbonic anhydrase fold, carbon disulfide hydrolysis; HET: PE3; 2.40A {Acidianus SP} PDB: 3ten_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 312
d1ekja_210 c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum 8e-67
d1ddza2239 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red 2e-57
d1ddza1242 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red a 2e-48
d1i6pa_214 c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia 7e-48
d1g5ca_169 c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Me 3e-32
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Length = 210 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

 Score =  206 bits (524), Expect = 8e-67
 Identities = 165/210 (78%), Positives = 179/210 (85%), Gaps = 10/210 (4%)

Query: 113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAF 172
           ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAF
Sbjct: 1   EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAF 60

Query: 173 VVRNVANIVPPYDQTKYAGVGAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNS 232
           VVRNVAN+VPPYDQ KYAG GAA+EYAVLHLKVSNIVVIGHSACGGIKGL+SF FDG  S
Sbjct: 61  VVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS 120

Query: 233 TDFIEDW----------VLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKT 282
           TDFIE+W          V  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKT
Sbjct: 121 TDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKT 180

Query: 283 LALKGGYYDFVNGSFELWGLDFSLSPPLSV 312
           LALKGGYYDFV GSFELWGL+F LS   SV
Sbjct: 181 LALKGGYYDFVKGSFELWGLEFGLSSTFSV 210
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 239 Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Length = 242 Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Length = 214 Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 169 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d1ekja_210 beta-carbonic anhydrase {Pea (Pisum sativum) [TaxI 100.0
d1ddza2239 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1i6pa_214 beta-carbonic anhydrase {Escherichia coli [TaxId: 100.0
d1ddza1242 beta-carbonic anhydrase {Red alga (Porphyridium pu 100.0
d1g5ca_169 beta-carbonic anhydrase {Archaeon Methanobacterium 100.0
>d1ekja_ c.53.2.1 (A:) beta-carbonic anhydrase {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Resolvase-like
superfamily: beta-carbonic anhydrase, cab
family: beta-carbonic anhydrase, cab
domain: beta-carbonic anhydrase
species: Pea (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=1.3e-58  Score=414.82  Aligned_cols=200  Identities=83%  Similarity=1.381  Sum_probs=181.2

Q ss_pred             HHHHHHHHHHHHHHhhhccCChhhHHhhhcCCCCcEEEEeecCCCCChhhhcCCCCCceEEEEcccccCCCCCCccchhh
Q 021414          113 DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKYAGV  192 (312)
Q Consensus       113 ~~l~~Ll~GN~rF~~~~~~~~p~~~~~La~gQ~PkalVItCsDSRV~Pe~il~~~pGD~FVvRNaGN~V~~~d~~~~~~v  192 (312)
                      +++++|++||+||+++++.+++++|++|++||+|+++|||||||||+|+.+||.+|||+||+||+||+|+++|...+.++
T Consensus         1 ~a~e~l~~G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~C~DSRv~~e~if~~~~GdlfvvRnaGn~v~~~~~~~~~~~   80 (210)
T d1ekja_           1 EASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGT   80 (210)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCCCSEEEEEECCGGGCHHHHSCCCTTSEEEEEEGGGCCCCSCTTTCHHH
T ss_pred             ChHHHHHHHHHHHHhCccccCHHHHHHHhcCCCCceEEEeccccCCChhhhccCCCCcEEEEeccCCccCccccccchhh
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999876656678


Q ss_pred             HHHHHHHHHhcCcceEEEeccCCcchhhhccccccCCCCCchhHHHHHhhh----------cCCCCcccccchhHHHHHH
Q 021414          193 GAAVEYAVLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVLTE----------HGDKPFGDQCTYCEKEAVN  262 (312)
Q Consensus       193 ~aSLEyAV~~L~Vk~IVV~GHSdCGai~Aa~~~~~~g~~~~~~I~~wl~~~----------~~~l~~~e~~~~~e~~nV~  262 (312)
                      ++|||||+.+|||++|||||||+||||+|+++....+....+++..|+...          ..+.+..+..+.++++||+
T Consensus        81 ~~sleyav~~l~v~~IVVlGHt~CGav~Aa~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~nV~  160 (210)
T d1ekja_          81 GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVN  160 (210)
T ss_dssp             HHHHHHHHHTSCCSEEEEEEESSCHHHHHHHHCCCSSCCCSSSHHHHHGGGHHHHHHHHHHSTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhcCCceEEEEEcCcchHHHHHhhhhhhccCccCchHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999987766666677889998321          1233334455678899999


Q ss_pred             HHHHHhhcChHHHhhhhCCceEEEEEEEEccCCeEEEEeccCCCCCCCCC
Q 021414          263 VSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFSLSPPLSV  312 (312)
Q Consensus       263 ~qv~~L~~~P~v~~~v~~g~L~V~G~vYDi~TG~v~~v~~~~~~~~~~~~  312 (312)
                      .|+++|++||+|++++++|+|.||||+||++||+|++|+.+++.++++++
T Consensus       161 ~~v~~L~~~p~I~~~v~~g~l~I~G~vYDi~tG~v~~~~~~~g~~~~~~~  210 (210)
T d1ekja_         161 ASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV  210 (210)
T ss_dssp             HHHHHHTTSHHHHHHHHTTSCEEEEEEEETTTTEEEEEEECCCCCCCCCC
T ss_pred             HHHHHHHcCHHHHHHHHcCCeEEEEEEEECCCcEEEEEeccCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999986
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]} Back     information, alignment and structure
>d1g5ca_ c.53.2.1 (A:) beta-carbonic anhydrase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure