Citrus Sinensis ID: 021442

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYAESS
cccccccccccHHHHHHHHHHHHHccccEEEEccccccEEEEEcccccccccHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccEEEEccccHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccEEccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccHHccccccEEEcccccccccEEEEEccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcc
cccccccccccHHHHHHHHHHHHHHcccEEEEEccccccEEEEEccccEEcHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccEEEEEcccHHHHHHHHHHHccccccccccccccccHEHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccEccccccEEEEcEEEEEccccccEEEEcEEEEEEcccccccccEEEEEccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHEccc
mfpnhipnpedkTAMALTRAAVLEnnadlgvvfdtdvdrsgvvdnkgnpingDKLIALMSAIVLkehpgttivtdarTSMALTKFITdrggnhclyrvgyrNVIDKGVHLNEDGIETHLMMEtsghgalkenyflddgAYMVVKIIIQMVRMklegsdegIGSLIKDLEEPLESIELRMNIisepryakakGSEAIEEFRKYIEEGRlqgweldscgdcwvsegclvdsnespaaIDARMYRakvtdeehgqyGWIHLRqsihnpniavnvqsmvpggcrSITKSLRDKFLLASGMDKVLDISQIEKYAESS
mfpnhipnpedKTAMALTRAAVLENNADLgvvfdtdvdrsgvvdnkgnpingdKLIALMSAIVLKEHpgttivtdartSMALTKFItdrggnhcLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRmniisepryakakgseAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLasgmdkvldisQIEKYAESS
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYAESS
****************LTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDIS*********
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVR*************IKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYA***
MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYAESS
*FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYAES*
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MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARMYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVLDISQIEKYAESS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query312 2.2.26 [Sep-21-2011]
P45632469 Phosphomannomutase OS=Azo yes no 0.522 0.347 0.322 1e-19
Q88BD4465 Phosphomannomutase/phosph yes no 0.448 0.301 0.376 9e-18
P26276463 Phosphomannomutase/phosph yes no 0.567 0.382 0.303 1e-16
Q88C93463 Phosphomannomutase/phosph yes no 0.564 0.380 0.306 2e-16
P26341456 Phosphomannomutase OS=Sal yes no 0.493 0.337 0.303 2e-14
Q01411456 Phosphomannomutase OS=Sal N/A no 0.496 0.339 0.305 3e-14
P40391460 Phosphoglucomutase OS=Nei yes no 0.448 0.304 0.315 1e-13
P24175456 Phosphomannomutase OS=Esc N/A no 0.5 0.342 0.301 2e-13
O85343456 Phosphomannomutase OS=Esc N/A no 0.538 0.368 0.293 2e-13
P40390460 Phosphoglucomutase OS=Nei yes no 0.599 0.406 0.274 4e-13
>sp|P45632|EXOC_AZOBR Phosphomannomutase OS=Azospirillum brasilense GN=exoC PE=3 SV=2 Back     alignment and function desciption
 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 23/186 (12%)

Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P  +  +   +AAV E+  D+G+ FD D DR G +D+ G  + GD+L+A+ +A
Sbjct: 208 FPNHHPDPTVEKNLVDLKAAVAEHGCDIGIGFDGDGDRIGAIDHLGRVVWGDQLVAIYAA 267

Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            VLK HPG TI+ D + S  L   I   GGN  +++ G+  +  K   + E G  + L  
Sbjct: 268 DVLKSHPGATIIADVKASQTLFDEIARLGGNPLMWKTGHSLLKAK---MAETG--SPLAG 322

Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRM- 179
           E SGH    + ++  DD  Y  V++I                 L+  L +PL  +  R+ 
Sbjct: 323 EMSGHIFFADKWYGFDDALYCAVRLI----------------GLVSKLNQPLSELRDRLP 366

Query: 180 NIISEP 185
           ++++ P
Sbjct: 367 DVVNTP 372

Azospirillum brasilense (taxid: 192)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 8
>sp|Q88BD4|ALGC_PSESM Phosphomannomutase/phosphoglucomutase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algC PE=3 SV=1 Back     alignment and function description
>sp|P26276|ALGC_PSEAE Phosphomannomutase/phosphoglucomutase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=algC PE=1 SV=4 Back     alignment and function description
>sp|Q88C93|ALGC_PSEPK Phosphomannomutase/phosphoglucomutase OS=Pseudomonas putida (strain KT2440) GN=algC PE=3 SV=1 Back     alignment and function description
>sp|P26341|MANB_SALTY Phosphomannomutase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=manB PE=3 SV=2 Back     alignment and function description
>sp|Q01411|MANB_SALMO Phosphomannomutase OS=Salmonella montevideo GN=manB PE=3 SV=1 Back     alignment and function description
>sp|P40391|PGM_NEIMB Phosphoglucomutase OS=Neisseria meningitidis serogroup B (strain MC58) GN=pgm PE=3 SV=2 Back     alignment and function description
>sp|P24175|MANB_ECOLI Phosphomannomutase OS=Escherichia coli (strain K12) GN=manB PE=3 SV=1 Back     alignment and function description
>sp|O85343|MANB_ECO57 Phosphomannomutase OS=Escherichia coli O157:H7 GN=manB PE=3 SV=1 Back     alignment and function description
>sp|P40390|PGM_NEIGO Phosphoglucomutase OS=Neisseria gonorrhoeae GN=pgm PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
255573758 620 phosphoglucomutase, putative [Ricinus co 0.996 0.501 0.855 1e-162
224101859 554 predicted protein [Populus trichocarpa] 0.996 0.561 0.848 1e-160
225424281 617 PREDICTED: phosphomannomutase/phosphoglu 0.996 0.504 0.832 1e-158
356576034 619 PREDICTED: phosphomannomutase/phosphoglu 0.996 0.502 0.826 1e-156
357475239 621 Phosphoglucosamine mutase [Medicago trun 0.996 0.500 0.823 1e-154
534982 583 phosphoglucomutase [Spinacia oleracea] 0.993 0.531 0.790 1e-149
15223252 615 phosphoglucomutase-like protein [Arabido 0.987 0.500 0.799 1e-149
297838899 615 hypothetical protein ARALYDRAFT_476213 [ 0.987 0.500 0.792 1e-148
449522169 575 PREDICTED: phosphomannomutase/phosphoglu 0.996 0.540 0.781 1e-148
449466867 616 PREDICTED: phosphomannomutase/phosphoglu 0.996 0.504 0.781 1e-148
>gi|255573758|ref|XP_002527800.1| phosphoglucomutase, putative [Ricinus communis] gi|223532835|gb|EEF34610.1| phosphoglucomutase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 266/311 (85%), Positives = 295/311 (94%)

Query: 1   MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
           MFPNHIPNPEDKTAMALTRAAVL+N+ADLG+VFDTDVDRSGVVDNKGNPINGDKLIALMS
Sbjct: 306 MFPNHIPNPEDKTAMALTRAAVLDNSADLGIVFDTDVDRSGVVDNKGNPINGDKLIALMS 365

Query: 61  AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
           AIVL+EHPGTTIVTDARTSMAL++FITDRGG HCLYRVGYRNVIDKGVHLNEDGIE HLM
Sbjct: 366 AIVLREHPGTTIVTDARTSMALSRFITDRGGQHCLYRVGYRNVIDKGVHLNEDGIEAHLM 425

Query: 121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           METSGHGALKENYFLDDGAYMVVKIII+MVRMKL GSDEGIGSLIKDLEEP E IELRMN
Sbjct: 426 METSGHGALKENYFLDDGAYMVVKIIIEMVRMKLAGSDEGIGSLIKDLEEPREVIELRMN 485

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240
           +ISEPR+AKAK  E IE+FR +IEEG+L+GWELD CGDCWVS+GCLVDSN++PAA+DA M
Sbjct: 486 VISEPRHAKAKAVEVIEKFRNFIEEGKLEGWELDYCGDCWVSDGCLVDSNDTPAAVDAYM 545

Query: 241 YRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKVL 300
           YR KV+DEEHGQ+GW+HLRQSIHNPNIAVN+QSMVPG C+S+T+ LRDKFL+ASG+DK L
Sbjct: 546 YRTKVSDEEHGQHGWVHLRQSIHNPNIAVNMQSMVPGACQSMTEVLRDKFLVASGIDKFL 605

Query: 301 DISQIEKYAES 311
           DI+QI+KYA +
Sbjct: 606 DITQIDKYANT 616

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224101859|ref|XP_002312448.1| predicted protein [Populus trichocarpa] gi|222852268|gb|EEE89815.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424281|ref|XP_002280911.1| PREDICTED: phosphomannomutase/phosphoglucomutase [Vitis vinifera] gi|297737677|emb|CBI26878.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576034|ref|XP_003556140.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Glycine max] Back     alignment and taxonomy information
>gi|357475239|ref|XP_003607905.1| Phosphoglucosamine mutase [Medicago truncatula] gi|355508960|gb|AES90102.1| Phosphoglucosamine mutase [Medicago truncatula] Back     alignment and taxonomy information
>gi|534982|emb|CAA53507.1| phosphoglucomutase [Spinacia oleracea] Back     alignment and taxonomy information
>gi|15223252|ref|NP_177239.1| phosphoglucomutase-like protein [Arabidopsis thaliana] gi|5902394|gb|AAD55496.1|AC008148_6 Putative phosphoglucomutase [Arabidopsis thaliana] gi|20260528|gb|AAM13162.1| putative phosphoglucomutase [Arabidopsis thaliana] gi|30725426|gb|AAP37735.1| At1g70820 [Arabidopsis thaliana] gi|332196999|gb|AEE35120.1| phosphoglucomutase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297838899|ref|XP_002887331.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] gi|297333172|gb|EFH63590.1| hypothetical protein ARALYDRAFT_476213 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449522169|ref|XP_004168100.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|449466867|ref|XP_004151147.1| PREDICTED: phosphomannomutase/phosphoglucomutase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query312
TAIR|locus:2014025615 AT1G70820 "AT1G70820" [Arabido 0.987 0.500 0.799 6.7e-136
UNIPROTKB|Q69TT2625 OSJNBa0026P23.2-1 "Os06g047620 0.990 0.494 0.679 2.3e-117
UNIPROTKB|A8J352503 CHLREDRAFT_119219 "Predicted p 0.679 0.421 0.525 1.1e-60
UNIPROTKB|Q7XHZ2543 P0475E07.126 "Putative phospho 0.634 0.364 0.528 3.8e-56
UNIPROTKB|Q88BD4465 algC "Phosphomannomutase/phosp 0.544 0.365 0.327 4e-19
UNIPROTKB|Q603M2463 MCA2782 "Phosphoglucomutase/ph 0.695 0.468 0.292 5.2e-17
UNIPROTKB|A6VEC9868 algC "Phosphomannomutase AlgC" 0.567 0.203 0.313 1.3e-16
TIGR_CMR|CBU_0294471 CBU_0294 "phosphomannomutase" 0.560 0.371 0.322 2.5e-15
UNIPROTKB|Q4K3S1465 algC "Phosphomannomutase/phosp 0.567 0.380 0.292 3.2e-15
UNIPROTKB|P24175456 cpsG "phosphomannomutase" [Esc 0.496 0.339 0.305 1.3e-12
TAIR|locus:2014025 AT1G70820 "AT1G70820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
 Identities = 247/309 (79%), Positives = 285/309 (92%)

Query:     1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
             MFPNHIPNPE+K AM  TRAAVLEN+ADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS
Sbjct:   302 MFPNHIPNPENKIAMQHTRAAVLENSADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 361

Query:    61 AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
             AIVLKEHPG+T+VTDARTSM LT+FIT+RGG HCLYRVGYRNVIDKGV LN+DGIETHLM
Sbjct:   362 AIVLKEHPGSTVVTDARTSMGLTRFITERGGRHCLYRVGYRNVIDKGVELNKDGIETHLM 421

Query:   121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
             METSGHGA+KEN+FLDDGAYMVVKIII+MVRM+L GS+EGIGSLI+DLEEPLE++ELR+N
Sbjct:   422 METSGHGAVKENHFLDDGAYMVVKIIIEMVRMRLAGSNEGIGSLIEDLEEPLEAVELRLN 481

Query:   181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM 240
             I+SEPR AKAKG EAIE FR+YIEEG+L+GWEL +CGDCWV+EGCLVDSN+ P+AIDA M
Sbjct:   482 ILSEPRDAKAKGIEAIETFRQYIEEGKLKGWELGTCGDCWVTEGCLVDSNDHPSAIDAHM 541

Query:   241 YRAKVTDEEHGQ-YGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASGMDKV 299
             YRA+V+DEE G+ YGW+H+RQSIHNPNIA+N+QSM+PGGC S+T+  RD+FL ASG+ + 
Sbjct:   542 YRARVSDEESGEEYGWVHMRQSIHNPNIALNMQSMLPGGCLSMTRIFRDQFLEASGVARF 601

Query:   300 LDISQIEKY 308
             LDIS  + Y
Sbjct:   602 LDISDFDNY 610
GO:0004610 "phosphoacetylglucosamine mutase activity" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS
GO:0006048 "UDP-N-acetylglucosamine biosynthetic process" evidence=IBA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016868 "intramolecular transferase activity, phosphotransferases" evidence=IEA;ISS
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0042631 "cellular response to water deprivation" evidence=RCA
UNIPROTKB|Q69TT2 OSJNBa0026P23.2-1 "Os06g0476200 protein" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A8J352 CHLREDRAFT_119219 "Predicted protein" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XHZ2 P0475E07.126 "Putative phosphoglucomutase, chloroplast" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q88BD4 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] Back     alignment and assigned GO terms
UNIPROTKB|Q603M2 MCA2782 "Phosphoglucomutase/phosphomannomutase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)] Back     alignment and assigned GO terms
UNIPROTKB|A6VEC9 algC "Phosphomannomutase AlgC" [Pseudomonas aeruginosa PA7 (taxid:381754)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0294 CBU_0294 "phosphomannomutase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q4K3S1 algC "Phosphomannomutase/phosphoglucomutase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|P24175 cpsG "phosphomannomutase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_VIII0563
phosphoglucosamine mutase family protein (EC-5.4.2.8) (554 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
PLN02371583 PLN02371, PLN02371, phosphoglucosamine mutase fami 1e-175
cd03089443 cd03089, PMM_PGM, The phosphomannomutase/phosphogl 3e-72
COG1109464 COG1109, {ManB}, Phosphomannomutase [Carbohydrate 2e-26
TIGR03990443 TIGR03990, Arch_GlmM, phosphoglucosamine mutase 1e-18
PRK15414456 PRK15414, PRK15414, phosphomannomutase CpsG; Provi 2e-16
PRK09542445 PRK09542, manB, phosphomannomutase/phosphoglucomut 8e-16
cd03084355 cd03084, phosphohexomutase, The alpha-D-phosphohex 8e-15
cd03087439 cd03087, PGM_like1, This archaeal PGM-like (phosph 4e-14
cd05802434 cd05802, GlmM, GlmM is a bacterial phosphoglucosam 1e-13
pfam02879103 pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphom 2e-12
TIGR01455443 TIGR01455, glmM, phosphoglucosamine mutase 3e-12
pfam02880112 pfam02880, PGM_PMM_III, Phosphoglucomutase/phospho 1e-11
PRK10887443 PRK10887, glmM, phosphoglucosamine mutase; Provisi 1e-11
PRK14314450 PRK14314, glmM, phosphoglucosamine mutase; Provisi 2e-11
PRK14323440 PRK14323, glmM, phosphoglucosamine mutase; Provisi 3e-10
cd05805441 cd05805, MPG1_transferase, GTP-mannose-1-phosphate 1e-09
PRK14324446 PRK14324, glmM, phosphoglucosamine mutase; Provisi 8e-09
cd05800461 cd05800, PGM_like2, This PGM-like (phosphoglucomut 2e-08
PRK14317465 PRK14317, glmM, phosphoglucosamine mutase; Provisi 2e-08
PRK14318448 PRK14318, glmM, phosphoglucosamine mutase; Provisi 7e-08
PRK14321449 PRK14321, glmM, phosphoglucosamine mutase; Provisi 1e-07
PRK14315448 PRK14315, glmM, phosphoglucosamine mutase; Provisi 2e-07
cd05803445 cd05803, PGM_like4, This PGM-like (phosphoglucomut 3e-07
PRK14316448 PRK14316, glmM, phosphoglucosamine mutase; Provisi 5e-07
PRK14319430 PRK14319, glmM, phosphoglucosamine mutase; Provisi 1e-05
PRK14322429 PRK14322, glmM, phosphoglucosamine mutase; Provisi 4e-05
cd05799487 cd05799, PGM2, This CD includes PGM2 (phosphogluco 3e-04
PRK14320443 PRK14320, glmM, phosphoglucosamine mutase; Provisi 4e-04
>gnl|CDD|215211 PLN02371, PLN02371, phosphoglucosamine mutase family protein Back     alignment and domain information 
 Score =  496 bits (1280), Expect = e-175
 Identities = 165/308 (53%), Positives = 207/308 (67%), Gaps = 31/308 (10%)

Query: 1   MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMS 60
           MFPNHIPNPEDK AM+ T  AVL N ADLG++FDTDVDRS VVD+ G  IN ++LIALMS
Sbjct: 301 MFPNHIPNPEDKAAMSATTQAVLANKADLGIIFDTDVDRSAVVDSSGREINRNRLIALMS 360

Query: 61  AIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLM 120
           AIVL+EHPGTTIVTD+ TS  LT FI  +GG H  ++ GY+NVIDKGV LN DG ETHLM
Sbjct: 361 AIVLEEHPGTTIVTDSVTSDGLTTFIEKKGGKHHRFKRGYKNVIDKGVRLNSDGEETHLM 420

Query: 121 METSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           +ETSGHGALKEN+FLDDGAY+ VKIII++VRM+  G+  G+G LI+DLEEPLE++ELR+ 
Sbjct: 421 IETSGHGALKENHFLDDGAYLAVKIIIELVRMRAAGAGGGLGDLIEDLEEPLEAVELRLK 480

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEE-GRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR 239
           I+ E +  KA G E +E  R  IE  G+L+G  ++  G                      
Sbjct: 481 ILDEGKDFKAYGEEVLEHLRNSIESDGKLEGAPVNYEG---------------------- 518

Query: 240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKF-----LLAS 294
               +V+DE  G  GW  LRQS+H+P I +N++S  PGG + +   +         L AS
Sbjct: 519 ---VRVSDEGEGFGGWFLLRQSLHDPVIPLNIESSSPGGAQKMALVVLTWLKEFAALDAS 575

Query: 295 GMDKVLDI 302
            +DK LDI
Sbjct: 576 ALDKFLDI 583

Length = 583
>gnl|CDD|100091 cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>gnl|CDD|224034 COG1109, {ManB}, Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|234431 TIGR03990, Arch_GlmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|185312 PRK15414, PRK15414, phosphomannomutase CpsG; Provisional Back     alignment and domain information
>gnl|CDD|236557 PRK09542, manB, phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information
>gnl|CDD|100086 cd03084, phosphohexomutase, The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100089 cd03087, PGM_like1, This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>gnl|CDD|100095 cd05802, GlmM, GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>gnl|CDD|217264 pfam02879, PGM_PMM_II, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Back     alignment and domain information
>gnl|CDD|130522 TIGR01455, glmM, phosphoglucosamine mutase Back     alignment and domain information
>gnl|CDD|217265 pfam02880, PGM_PMM_III, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Back     alignment and domain information
>gnl|CDD|236787 PRK10887, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184614 PRK14314, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184620 PRK14323, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100097 cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>gnl|CDD|184621 PRK14324, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100093 cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>gnl|CDD|237671 PRK14317, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|237672 PRK14318, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172797 PRK14321, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|237669 PRK14315, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100096 cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>gnl|CDD|237670 PRK14316, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|172795 PRK14319, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|184619 PRK14322, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information
>gnl|CDD|100092 cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>gnl|CDD|172796 PRK14320, glmM, phosphoglucosamine mutase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 312
PRK09542445 manB phosphomannomutase/phosphoglucomutase; Review 100.0
cd03089443 PMM_PGM The phosphomannomutase/phosphoglucomutase 100.0
PLN02371583 phosphoglucosamine mutase family protein 100.0
PRK14321449 glmM phosphoglucosamine mutase; Provisional 100.0
cd05800461 PGM_like2 This PGM-like (phosphoglucomutase-like) 100.0
cd05803445 PGM_like4 This PGM-like (phosphoglucomutase-like) 100.0
cd03087439 PGM_like1 This archaeal PGM-like (phosphoglucomuta 100.0
PRK15414456 phosphomannomutase CpsG; Provisional 100.0
cd05805441 MPG1_transferase GTP-mannose-1-phosphate guanyltra 100.0
cd03085548 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bid 100.0
cd05801522 PGM_like3 This bacterial PGM-like (phosphoglucomut 100.0
PTZ00150584 phosphoglucomutase-2-like protein; Provisional 100.0
PRK07564543 phosphoglucomutase; Validated 100.0
COG1109464 {ManB} Phosphomannomutase [Carbohydrate transport 100.0
PLN02307579 phosphoglucomutase 100.0
TIGR01132543 pgm phosphoglucomutase, alpha-D-glucose phosphate- 100.0
cd05799487 PGM2 This CD includes PGM2 (phosphoglucomutase 2) 100.0
PRK10887443 glmM phosphoglucosamine mutase; Provisional 100.0
cd03088459 ManB ManB is a bacterial phosphomannomutase (PMM) 100.0
PRK14315448 glmM phosphoglucosamine mutase; Provisional 100.0
cd03084355 phosphohexomutase The alpha-D-phosphohexomutase su 100.0
PRK14324446 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14317465 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14316448 glmM phosphoglucosamine mutase; Provisional 100.0
cd05802434 GlmM GlmM is a bacterial phosphoglucosamine mutase 100.0
TIGR01455443 glmM phosphoglucosamine mutase. This model describ 100.0
PRK14314450 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14323440 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14322429 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14320443 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14318448 glmM phosphoglucosamine mutase; Provisional 100.0
PRK14319430 glmM phosphoglucosamine mutase; Provisional 100.0
cd03086513 PGM3 PGM3 (phosphoglucomutase 3), also known as PA 100.0
KOG1220607 consensus Phosphoglucomutase/phosphomannomutase [C 100.0
PTZ00302585 N-acetylglucosamine-phosphate mutase; Provisional 100.0
PLN02895562 phosphoacetylglucosamine mutase 100.0
KOG0625558 consensus Phosphoglucomutase [Carbohydrate transpo 99.97
COG0033524 Pgm Phosphoglucomutase [Carbohydrate transport and 99.96
PF02880113 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase 99.93
KOG2537539 consensus Phosphoglucomutase/phosphomannomutase [C 99.71
PF0040873 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, 99.44
PF02879104 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, 99.08
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed Back     alignment and domain information 
Probab=100.00  E-value=1.4e-53  Score=418.97  Aligned_cols=244  Identities=25%  Similarity=0.356  Sum_probs=216.2

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeeEEEcCCCcccChhHHHHHHHHHHHHhCCCCEEEEcccCCH
Q 021442            1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM   80 (312)
Q Consensus         1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~aDlGia~DgDgDR~~ivD~~G~~l~~d~~~~Ll~~~ll~~~~~~~Vv~~v~sS~   80 (312)
                      +||+++|||+.+++|+.+.+.|++.+||+||++||||||++++|++|+++++|++++|+++++++++++..||.|++||+
T Consensus       201 ~Fp~~~p~P~~~~~l~~l~~~v~~~~adlGia~DgD~DR~~ivd~~G~~l~~d~~~~l~~~~~l~~~~~~~vv~~v~ss~  280 (445)
T PRK09542        201 TFPNHEANPLDPANLVDLQAFVRETGADIGLAFDGDADRCFVVDERGQPVSPSAVTALVAARELAREPGATIIHNLITSR  280 (445)
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHHcCCCEEEEECCCCceEEEECCCCCCccHHHHHHHHHHHHHHHCCCCeEEEeeccch
Confidence            59999999998899999999999999999999999999999999999999999999999999998877778999999999


Q ss_pred             HHHHHHHHcCCcEEEeecchHHHHHHHhccCcCCcceeEEeecccCccCCCCcccCCHHHHHHHHHHHHHHHHhcCCCCC
Q 021442           81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMKLEGSDEG  160 (312)
Q Consensus        81 ~l~~ia~~~G~~v~~t~vG~~~i~~~~~~~~~~~~~~~~ggE~sG~~~~~~~~~~~Dgi~aal~ll~ell~~~~~~~~~~  160 (312)
                      +++++|+++|+++++|||||+|++++|.+.++     +||||+|||++|+++++++|||+++++++ +|++.    ++++
T Consensus       281 ~~~~~a~~~g~~~~~t~vG~~~i~~~m~~~~~-----~~ggE~sgg~~f~~~~~~~Dgi~a~~~ll-e~l~~----~~~~  350 (445)
T PRK09542        281 AVPELVAERGGTPVRTRVGHSFIKALMAETGA-----IFGGEHSAHYYFRDFWGADSGMLAALHVL-AALGE----QDRP  350 (445)
T ss_pred             hHHHHHHHcCCeEEEecCcHHHHHHHHHHhCC-----cEEEeeeccEEecCcCCCCcHHHHHHHHH-HHHHh----cCCC
Confidence            99999999999999999999999999998764     89999999999999999999999999775 99987    6899


Q ss_pred             HHHHHHHhhhhhcceeEEEEeecCchhhHhHHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccCcCc
Q 021442          161 IGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDARM  240 (312)
Q Consensus       161 lsell~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DG  240 (312)
                      |+++++.+|++|  ...+++|++..      ++++|++|.+.+.+.                         ..+++++||
T Consensus       351 l~~l~~~~~~~~--~~~~~~~~~~~------~~~~~~~l~~~~~~~-------------------------~~~~~~~DG  397 (445)
T PRK09542        351 LSELMADYQRYA--ASGEINSTVAD------APARMEAVLKAFADR-------------------------IVSVDHLDG  397 (445)
T ss_pred             HHHHHHhhhhcC--cccceeecCCC------HHHHHHHHHHHhhhc-------------------------cCCceecce
Confidence            999999998754  22356666532      245888887665420                         014568999


Q ss_pred             eEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhhHHHHHHHHHHHHhhh
Q 021442          241 YRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLA  293 (312)
Q Consensus       241 lki~~~~~~~~~~~wvliRpSgTEP~iriy~Ea~~~~~a~~l~~~~~~~~~~~  293 (312)
                      +|+.|     ++++|++||||||||++|||+||+++++++++++++.+ .|+.
T Consensus       398 vki~~-----~dg~WvliRpSgTEP~lriy~Ea~~~e~~~~l~~~~~~-~v~~  444 (445)
T PRK09542        398 VTVDL-----GDGSWFNLRASNTEPLLRLNVEARTEEEVDALVDEVLA-IIRA  444 (445)
T ss_pred             EEEEe-----cCCcEEEEEecCCCcEEEEEEEeCCHHHHHHHHHHHHH-Hhhc
Confidence            99998     44569999999999999999999999999999999999 7754

>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e Back     alignment and domain information
>PLN02371 phosphoglucosamine mutase family protein Back     alignment and domain information
>PRK14321 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria Back     alignment and domain information
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes Back     alignment and domain information
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PRK15414 phosphomannomutase CpsG; Provisional Back     alignment and domain information
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity Back     alignment and domain information
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes Back     alignment and domain information
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>PTZ00150 phosphoglucomutase-2-like protein; Provisional Back     alignment and domain information
>PRK07564 phosphoglucomutase; Validated Back     alignment and domain information
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02307 phosphoglucomutase Back     alignment and domain information
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific Back     alignment and domain information
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1) Back     alignment and domain information
>PRK10887 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate Back     alignment and domain information
>PRK14315 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates Back     alignment and domain information
>PRK14324 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14317 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14316 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily Back     alignment and domain information
>TIGR01455 glmM phosphoglucosamine mutase Back     alignment and domain information
>PRK14314 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14323 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14322 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14320 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14318 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>PRK14319 glmM phosphoglucosamine mutase; Provisional Back     alignment and domain information
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway Back     alignment and domain information
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional Back     alignment and domain information
>PLN02895 phosphoacetylglucosamine mutase Back     alignment and domain information
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02880 PGM_PMM_III: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; InterPro: IPR005846 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00408 PGM_PMM_IV: Phosphoglucomutase/phosphomannomutase, C-terminal domain; InterPro: IPR005843 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
3rsm_A463 Crystal Structure Of S108c Mutant Of PmmPGM Length 8e-18
2fkf_A462 PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMON 9e-18
1p5d_X463 Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Lengt 9e-18
1k2y_X463 Crystal Structure Of Phosphomannomutase/phosphogluc 9e-18
2fkm_X462 Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisph 9e-18
2h4l_X463 Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 9e-18
3bkq_X463 Structure Of The P368g Mutant Of PmmPGM IN COMPLEX 1e-17
1k35_A463 Crystal Structure Of Phosphomannomutase/phosphogluc 3e-17
3uw2_A485 X-Ray Crystal Structure Of PhosphoglucomutasePHOSPH 1e-14
1wqa_A455 Crystal Structure Of Pyrococcus Horikoshii Phosphom 1e-07
>pdb|3RSM|A Chain A, Crystal Structure Of S108c Mutant Of PmmPGM Length = 463 Back     alignment and structure 
Iteration: 1

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P     +    A V   NADLG+ FD D DR GVV N G  I  D+L+ L + 
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269
Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K   + E G    L  
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETG--ALLAG 324
Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           E SGH   KE +F  DDG Y   + +++++      S+    +   D+  P    E+ + 
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAAR-LLEILSQDQRDSEHVFSAFPSDISTP----EINIT 379
Query: 181 IISEPRYA 188
           +  + ++A
Sbjct: 380 VTEDSKFA 387
>pdb|2FKF|A Chain A, PhosphomannomutasePHOSPHOGLUCOMUTASE FROM PSEUDOMONAS AERUGINOSA WITH Alpha-D-Glucose 1,6-Bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|1P5D|X Chain X, Enzyme-Ligand Complex Of P. Aeruginosa PmmPGM Length = 463 Back     alignment and structure
>pdb|1K2Y|X Chain X, Crystal Structure Of Phosphomannomutase/phosphoglucomutase S108a Mutant From P. Aeruginosa Length = 463 Back     alignment and structure
>pdb|2FKM|X Chain X, Pmm/pgm S108d Mutant With Alpha-d-glucose 1,6-bisphosphate Bound Length = 462 Back     alignment and structure
>pdb|2H4L|X Chain X, Complex Of PmmPGM WITH RIBOSE 1-Phosphate Length = 463 Back     alignment and structure
>pdb|3BKQ|X Chain X, Structure Of The P368g Mutant Of PmmPGM IN COMPLEX WITH ITS SUBSTRATE Length = 463 Back     alignment and structure
>pdb|1K35|A Chain A, Crystal Structure Of Phosphomannomutase/phosphoglucomutase From P.aeruginosa Length = 463 Back     alignment and structure
>pdb|3UW2|A Chain A, X-Ray Crystal Structure Of PhosphoglucomutasePHOSPHOMANNOMUTASE Family Protein (Bth_i1489)from Burkholderia Thailandensis Length = 485 Back     alignment and structure
>pdb|1WQA|A Chain A, Crystal Structure Of Pyrococcus Horikoshii PhosphomannomutasePHOSPHOGLUCOMUTASE COMPLEXED WITH MG2+ Length = 455 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query312
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 5e-34
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 6e-33
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 2e-20
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 7e-16
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 4e-15
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 1e-12
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 6e-12
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 7e-08
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 1e-07
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 1e-06
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 2e-05
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 1e-04
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Length = 463 Back     alignment and structure
 Score =  128 bits (324), Expect = 5e-34
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 2   FPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSA 61
           FPNH P+P     +    A V   NADLG+ FD D DR GVV N G  I  D+L+ L + 
Sbjct: 210 FPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAK 269

Query: 62  IVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMM 121
            V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K   + E G    L  
Sbjct: 270 DVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKK---MKETGAL--LAG 324

Query: 122 ETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDLEEPLESIELRMN 180
           E SGH   KE +F  DDG Y   +++  + +            +       + + E+ + 
Sbjct: 325 EMSGHVFFKERWFGFDDGIYSAARLLEILSQ-----DQRDSEHVFSAFPSDISTPEINIT 379

Query: 181 IISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELD----SCGDCW 220
           +  + ++A       IE  ++  + G      LD         W
Sbjct: 380 VTEDSKFA------IIEALQRDAQWGEGNITTLDGVRVDYPKGW 417
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Length = 485 Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Length = 455 Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Length = 464 Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Length = 455 Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Length = 469 Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Length = 443 Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Length = 524 Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Length = 561 Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Length = 570 Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Length = 544 Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Length = 572 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
3uw2_A485 Phosphoglucomutase/phosphomannomutase family PROT; 100.0
1p5d_X463 PMM, phosphomannomutase; alpha/beta protein, phosp 100.0
2f7l_A455 455AA long hypothetical phospho-sugar mutase; phos 100.0
1wqa_A455 Phospho-sugar mutase; alpha-beta protein, unphosph 100.0
1tuo_A464 Putative phosphomannomutase; thermus thermophilus 100.0
3pmg_A561 Alpha-D-glucose-1,6-bisphosphate; phosphoglucomuta 100.0
3na5_A570 Phosphoglucomutase; isomerase, metal binding; HET: 100.0
4hjh_A481 Phosphomannomutase; structural genomics, niaid, na 100.0
3pdk_A469 Phosphoglucosamine mutase; 4-domain architecture, 100.0
3i3w_A443 Phosphoglucosamine mutase; csgid, IDP02164, isomer 100.0
1kfi_A572 Phosphoglucomutase 1; parafusin, phosphoprotein PP 100.0
2z0f_A524 Putative phosphoglucomutase; isomerase, magnesium, 100.0
2dka_A544 Phosphoacetylglucosamine mutase; isomerase; 1.93A 100.0
1wjw_A112 Phosphoacetylglucosamine mutase; carbohydrate meta 99.52
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis} Back     alignment and structure
Probab=100.00  E-value=1.2e-53  Score=421.66  Aligned_cols=247  Identities=24%  Similarity=0.425  Sum_probs=218.1

Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHhcCCcEEEEecCCCCeeEEEcCCCcccChhHHHHHHHHHHHHhCCCCEEEEcccCCH
Q 021442            1 MFPNHIPNPEDKTAMALTRAAVLENNADLGVVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLKEHPGTTIVTDARTSM   80 (312)
Q Consensus         1 ~Fp~~~P~P~~~~~l~~l~~~v~~~~aDlGia~DgDgDR~~ivD~~G~~l~~d~~~~Ll~~~ll~~~~~~~Vv~~v~sS~   80 (312)
                      +||+++|||+.+++|+.+.+.|++.+||+||++||||||++++|++|++++||++++|+++++++++++..||.|++||.
T Consensus       231 ~Fp~~~p~P~~~~~l~~l~~~v~~~~aDlgia~DgDaDR~~vvd~~G~~i~gd~~~alla~~ll~~~~~~~vv~~v~ss~  310 (485)
T 3uw2_A          231 NFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTR  310 (485)
T ss_dssp             TCCSSCSCTTSGGGGHHHHHHHHHSSCCEEEEECTTSSCEEEECTTSCBCCHHHHHHHHHHHHHHHSTTCEEEEETTSCT
T ss_pred             CCCCCCcCCCCHHHHHHHHHHHHhhCCCEEEEECCCCCeEEEEeCCCceECHHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence            59999999999999999999999999999999999999999999999999999999999999999988888999999999


Q ss_pred             HHHHHHHHcCCcEEEeecchHHHHHHHhccCcCCcceeEEeecccCccCCCCcc-cCCHHHHHHHHHHHHHHHHhcCCCC
Q 021442           81 ALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALKENYF-LDDGAYMVVKIIIQMVRMKLEGSDE  159 (312)
Q Consensus        81 ~l~~ia~~~G~~v~~t~vG~~~i~~~~~~~~~~~~~~~~ggE~sG~~~~~~~~~-~~Dgi~aal~ll~ell~~~~~~~~~  159 (312)
                      .++++++++|+++++|+|||+||+++|.+.++     +||||+|||++|+++++ ++||++++++++ ++++.    .+ 
T Consensus       311 ~l~~~~~~~g~~~~~t~vG~k~i~~~m~~~~~-----~~ggE~SG~~~f~~~~~~~~Dgi~aal~ll-e~la~----~~-  379 (485)
T 3uw2_A          311 NLARWVREKGGEPLMWKTGHSLVKAKLRETGA-----PLAGEMSGHVFFKDRWYGFDDGLYTGARLL-EILAR----VA-  379 (485)
T ss_dssp             HHHHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSCEEETTTTCSSBCHHHHHHHHH-HHHTT----SS-
T ss_pred             HHHHHHHHcCCEEEEEcCChHHHHHHHHhhcc-----cceecccCcEeeccccCCCCcHHHHHHHHH-HHHHh----cC-
Confidence            99999999999999999999999999999874     89999999999999764 699999999765 99987    57 


Q ss_pred             CHHHHHHHhhhhhcceeEEEEeecCchhhHhHHHHHHHHHHhhhhhcccCCccccccCccccccccccCCCCCCcccCcC
Q 021442          160 GIGSLIKDLEEPLESIELRMNIISEPRYAKAKGSEAIEEFRKYIEEGRLQGWELDSCGDCWVSEGCLVDSNESPAAIDAR  239 (312)
Q Consensus       160 ~lsell~~lp~~~~~~~~~i~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D  239 (312)
                      +|++++++||++|.+...+++|++..      +.++|++|.+..+   +++                     ..+++.+|
T Consensus       380 ~lsel~~~lp~~~~~~~~~v~~~~~~------~~~~~~~l~~~~~---~~~---------------------~~~~~~~D  429 (485)
T 3uw2_A          380 DPSALLNGLPNAVSTPELQLKLEEGE------NVKLIDKLRADAK---FDG---------------------ADEVVTID  429 (485)
T ss_dssp             CHHHHHHTSCCCEECCCEEC------------CTHHHHHHHHSCC---CTT---------------------CSEEECSS
T ss_pred             CHHHHHHHhhHhhCCceEEEeCCchh------HHHHHHHHHhhhc---ccc---------------------cccccccc
Confidence            99999999998876655677777532      2478999977542   111                     13467899


Q ss_pred             ceEEEEeecccCCceEEEEecCCCCccEEEEEEeCChhhHHHHHHHHHHHHhhhcc
Q 021442          240 MYRAKVTDEEHGQYGWIHLRQSIHNPNIAVNVQSMVPGGCRSITKSLRDKFLLASG  295 (312)
Q Consensus       240 Glki~~~~~~~~~~~wvliRpSgTEP~iriy~Ea~~~~~a~~l~~~~~~~~~~~~~  295 (312)
                      |+|+.+      ++||++||||||||++|||+||++++.++++++++.+ +|+...
T Consensus       430 Gvrv~~------~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~-~i~~~~  478 (485)
T 3uw2_A          430 GLRVEY------PDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRR-ALKAAK  478 (485)
T ss_dssp             SEEEEE------TTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHH-HHHHHS
T ss_pred             eEEEEe------CCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHH-HHHHhc
Confidence            999999      8899999999999999999999999999999999999 888764
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X* Back     alignment and structure
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii} Back     alignment and structure
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus} Back     alignment and structure
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A* Back     alignment and structure
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A* Back     alignment and structure
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV} Back     alignment and structure
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis} Back     alignment and structure
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp} Back     alignment and structure
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A Back     alignment and structure
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus} Back     alignment and structure
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A* Back     alignment and structure
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 312
d1p5dx3109 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglu 1e-11
d1p5dx2104 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglu 8e-08
d1kfia2118 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphop 7e-05
d3pmga2113 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (O 0.001
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Length = 109 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 52  GDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLN 111
            D+L+ L +  V+  +PG  I+ D + +  L   I+  GG   +++ G+  +  K     
Sbjct: 2   PDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETG 61

Query: 112 EDGIETHLMMETSGHGALKENYFLDDGAYMVVKIIIQMVRMK 153
                  L  E SGH   KE +F  D        +++++   
Sbjct: 62  -----ALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQD 98
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Length = 104 Back     information, alignment and structure
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Length = 118 Back     information, alignment and structure
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 113 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query312
d1p5dx3109 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.92
d3pmga3117 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.86
d1kfia3120 Exocytosis-sensitive phosphoprotein, pp63/parafusi 99.84
d1p5dx496 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.82
d1p5dx2104 Phosphomannomutase/phosphoglucomutase {Pseudomonas 99.45
d1wjwa_112 Phosphoacetylglucosamine mutase {Mouse (Mus muscul 99.38
d3pmga2113 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 99.36
d1kfia2118 Exocytosis-sensitive phosphoprotein, pp63/parafusi 98.81
d3pmga4141 Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) 98.73
d1kfia4129 Exocytosis-sensitive phosphoprotein, pp63/parafusi 98.66
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglucomutase, first 3 domains
superfamily: Phosphoglucomutase, first 3 domains
family: Phosphoglucomutase, first 3 domains
domain: Phosphomannomutase/phosphoglucomutase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.6e-25  Score=176.57  Aligned_cols=108  Identities=24%  Similarity=0.457  Sum_probs=100.8

Q ss_pred             ChhHHHHHHHHHHHHhCCCCEEEEcccCCHHHHHHHHHcCCcEEEeecchHHHHHHHhccCcCCcceeEEeecccCccCC
Q 021442           51 NGDKLIALMSAIVLKEHPGTTIVTDARTSMALTKFITDRGGNHCLYRVGYRNVIDKGVHLNEDGIETHLMMETSGHGALK  130 (312)
Q Consensus        51 ~~d~~~~Ll~~~ll~~~~~~~Vv~~v~sS~~l~~ia~~~G~~v~~t~vG~~~i~~~~~~~~~~~~~~~~ggE~sG~~~~~  130 (312)
                      .||++++|+++++++++|+..||.|++||+.++++++++|+++++|+||+++|.++|++.++     +||||+|||++|+
T Consensus         1 ~gD~il~lla~~~l~~~~~~~VV~~v~~s~~i~~~~~~~g~~~~~t~vG~~~v~~~m~~~~a-----~~GGE~SGh~~~~   75 (109)
T d1p5dx3           1 YPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGA-----LLAGEMSGHVFFK   75 (109)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTSCTHHHHHHHHTTCEEEEECSSHHHHHHHHHHHCC-----SEEECTTSBEEET
T ss_pred             CcHHHHHHHHHHHHHHCCCCeEEEeChhHhhHHHHHHHcCCccceecCChHHHHHHHhhcCC-----cEEecccceEEec
Confidence            48999999999999999998999999999999999999999999999999999999999885     8999999999999


Q ss_pred             CCcc-cCCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHh
Q 021442          131 ENYF-LDDGAYMVVKIIIQMVRMKLEGSDEGIGSLIKDL  168 (312)
Q Consensus       131 ~~~~-~~Dgi~aal~ll~ell~~~~~~~~~~lsell~~l  168 (312)
                      ++++ ++|||+++++++ ++++.    ++++|+|+++++
T Consensus        76 ~~~~~~~Dgi~~al~~l-e~l~~----~~~~lsel~~~f  109 (109)
T d1p5dx3          76 ERWFGFDDGIYSAARLL-EILSQ----DQRDSEHVFSAF  109 (109)
T ss_dssp             TTTCSSBCHHHHHHHHH-HHHHT----CSSCHHHHHHTS
T ss_pred             cCCCCCChHHHHHHHHH-HHHHH----cCCCHHHHHhcC
Confidence            8776 699999999776 99987    699999999864
>d3pmga3 c.84.1.1 (A:304-420) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p5dx2 c.84.1.1 (X:155-258) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia2 c.84.1.1 (A:206-323) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure
>d3pmga4 d.129.2.1 (A:421-561) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1kfia4 d.129.2.1 (A:444-572) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]} Back     information, alignment and structure