Citrus Sinensis ID: 021455

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQDQRMIIMEESQQHDQKVDHSGSSNLQVFSSSSIQTKKMNNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHcHHHHHHcccccHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccHHHHHcccccccEEEEEcccccccccccccccccccccccccccHcccccHccccccccccccccccccccccccccccccEEcccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHcccEEEccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccEEcHHHHEEEccccccHHccccccHHHHHHHHHHHHcccEcc
Coil and Loop (DISEMBL)
mtpvhlnpphdsdpfqlaeeqkddqhlhllhssshnraasssvswtnfQDQRMIIMEESqqhdqkvdhsgssnlqvfssssiqtkkmnnitnnklpirkrevgegttsengssssgkwMSSKIRLMHKMInsssnstaTHELAVKVTQKLQYhqlhdnsevnsfnssnsnntmracsdcnttttplwrsgprgpkslcnacGIRQRKARRAMQAAAAVETGtiaatggspfaKIKLqikdkkprtshvsqnkkqyrtldpdpthqyqsqRKLCFKDFAIALSknsalkqvfPQDVEEAAILLMELSCGFIHS
Flexible Loop (DISEMBL)
mtpvhlnpphdsdPFQLAEEQKDDQHLHLLHSsshnraasssvSWTNFQDQRMIIMEESQQHDQKVDHSGSSNLQVFssssiqtkkmnnitnnklpirkrevgegttsengssssgkWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTtttplwrsgprgpkslCNACGIRQRKARRAMQAAAAVEtgtiaatggspfAKIKlqikdkkprtshvsqnkkqyrtldpdpthqYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Low Complexity Region (SEG)
MTPVHLNPPHDSDPFQLAEEQKDDQhlhllhssshnraasssvsWTNFQDQRMIIMEESQQHDQKVDHSGSSNLQVFSSSSIQTKKMNNITNNKLPIRKREVgegttsengssssgkwmsskIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDnsevnsfnssnsnnTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIrqrkarramqaaaavetgtiaatggSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Disordered region (IsUnstruct)
******************************************************************************************************************************************************************************************W*********LCNACGIR***********AAVETGTIAAT*******************************************RKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFI**
Disordered Region (DISOPRED)
*TP******************************************************************************************************************************************************************************DCNTTTTPLWRSGPRGPKSLCNACGIRQ*******************************************************************************************EAAILLMELSCGFIHS
Disordered Region (DISEMBL)
********PHDSDPFQLAEEQKDDQHLHLLHSS***********WTNFQDQRMIIMEE**************NLQVFSSSSIQTKKMNNITNNKLPIRKREV****************MSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGI***************ETGTIAATGGSPFAKIKLQI**************KQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Disordered Region (DISPRO)
**PVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQ***************************************************************************************************************************MRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVE*************************************************QRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQDQRMIIMEESQQHDQKVDHSGSSNLQVFSSSSIQTKKMNNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q9SZI6	352	Putative GATA transcripti	yes	no	0.634	0.562	0.383	3e-26
Q9FJ10	139	GATA transcription factor	no	no	0.362	0.812	0.310	5e-13
Q8LC59	120	GATA transcription factor	no	no	0.182	0.475	0.561	1e-12
Q6QPM2	211	GATA transcription factor	no	no	0.182	0.270	0.543	4e-12
Q9ZPX0	208	GATA transcription factor	no	no	0.189	0.283	0.5	1e-11
Q8LC79	295	GATA transcription factor	no	no	0.141	0.149	0.659	1e-11
Q8LG10	149	GATA transcription factor	no	no	0.134	0.281	0.642	2e-11
Q9LIB5	190	GATA transcription factor	no	no	0.391	0.642	0.325	4e-11
Q6DBP8	303	GATA transcription factor	no	no	0.208	0.214	0.446	7e-11
Q8VZP4	308	GATA transcription factor	no	no	0.176	0.178	0.490	2e-10

>sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=2 SV=1

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 128/253 (50%), Gaps = 55/253 (21%)

Query: 94  KLPIRKRE-------VGEGTTSENGSSSSGKWMSSKIRLMHK--MINSSSNSTATHELAV 144
           KL I+K++       + +    +   ++S KW+SSK+RLM K   I ++S+S+  H    
Sbjct: 119 KLTIKKKDNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQH---- 174

Query: 145 KVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIR 204
             T   Q   L ++   N +N+   +  +R CSDCNTT TPLWRSGPRGPKSLCNACGIR
Sbjct: 175 --TNNDQSSNLSNSERQNGYNN---DCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229

Query: 205 QRKARRAMQAAAAVETGTIAATGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTH 264
           QRKARRA  A A       A +G SP          KK   +    +   Y+ L P P  
Sbjct: 230 QRKARRAAMATATAT----AVSGVSPPVM-------KKKMQNKNKISNGVYKILSPLPLK 278

Query: 265 QYQSQR--------------------------KLCFKDFAIALSKNSALKQVFPQDVEEA 298
               +R                           + F D A+ LSK+SA +QVFPQD +EA
Sbjct: 279 VNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKEA 338

Query: 299 AILLMELSCGFIH 311
           AILLM LS G +H
Sbjct: 339 AILLMALSHGMVH 351

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FJ10|GAT16_ARATH GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 35/148 (23%)

Query: 165 NSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIA 224
           N+++ N+  + C+DC T+ TPLWR GP GPKSLCNACGIR RK RR              
Sbjct: 27  NNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRR-------------- 72

Query: 225 ATGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKN 284
             GG+                     NKK  ++       ++    K    D  I     
Sbjct: 73  --GGT-------------------EDNKKLKKSSSGGGNRKFGESLKQSLMDLGIRKRST 111

Query: 285 SALKQVFPQDVEEAAILLMELSCGFIHS 312
              ++    + E+AA+LLM LS G +++
Sbjct: 112 VEKQRQKLGEEEQAAVLLMALSYGSVYA 139

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC59|GAT23_ARATH GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 37/57 (64%)

Query: 155 LHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRA 211
           L  +S   S        T+R CS+C TT TP+WR GP GPKSLCNACGIR RK RR+
Sbjct: 7   LSCSSSYVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6QPM2|GAT19_ARATH GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 39/57 (68%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSP 230
           R C++C+TT+TPLWR+GPRGPKSLCNACGIR +K  R    A    +G  +   G P
Sbjct: 75  RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAAGVP 131

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZPX0|GAT20_ARATH GATA transcription factor 20 OS=Arabidopsis thaliana GN=GATA20 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 5/64 (7%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAK 233
           R C+ C+TT+TPLWR+GP+GPKSLCNACGIR +K  R   A     +G     GGS  A+
Sbjct: 92  RRCASCDTTSTPLWRNGPKGPKSLCNACGIRFKKEERRATARNLTISG-----GGSSAAE 146

Query: 234 IKLQ 237
           + ++
Sbjct: 147 VPVE 150

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC79|GAT18_ARATH GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 35/44 (79%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAA 217
           R C++C+TT+TPLWR+GPRGPKSLCNACGIR +K  R   AA  
Sbjct: 152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATG 195

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG10|GAT15_ARATH GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 171 NTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAM 212
           N  ++C+ C T+ TPLWR GP GPKSLCNACGIR RK RR +
Sbjct: 38  NEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTL 79

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LIB5|GAT17_ARATH GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 50/172 (29%)

Query: 171 NTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSP 230
           +T R C DC T  TPLWR GP GPKSLCNACGI+ RK R+A     + E           
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEK---------- 88

Query: 231 FAKIKLQIKDKKPRTSHVS-------QNKKQYRT-LDPDPTHQYQSQRKLC--------- 273
                     KK R S+ +       +N K+Y+  +  D         K+C         
Sbjct: 89  ----------KKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSS 138

Query: 274 -------FKD--FAIALSKNSAL--KQVFPQDVEE--AAILLMELSCGFIHS 312
                  F D  F + + K SA+  K+++ +  EE  AA+LLM LSC  +++
Sbjct: 139 SNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 38/65 (58%)

Query: 162 NSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETG 221
           ++  +SNS+  +R C+ C TT TP WR GP GPK+LCNACG+R R  R   +   A    
Sbjct: 208 STLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPT 267

Query: 222 TIAAT 226
            I A 
Sbjct: 268 FIPAV 272

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 155 LHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 209
           L  ++E ++  SS S+  +R C+ C T TTP WR GP GPK+LCNACG+R +  R
Sbjct: 199 LITHTESSTLESSKSDGIVRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGR 253

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
118487597	303	unknown [Populus trichocarpa]	0.926	0.953	0.493	5e-54
225429550	306	PREDICTED: putative GATA transcription f	0.932	0.950	0.483	4e-52
224088836	234	predicted protein [Populus trichocarpa]	0.625	0.833	0.593	2e-47
118489347	303	unknown [Populus trichocarpa x Populus d	0.929	0.957	0.467	1e-45
118488977	306	unknown [Populus trichocarpa x Populus d	0.942	0.960	0.453	2e-45
356554076	306	PREDICTED: putative GATA transcription f	0.929	0.947	0.395	1e-39
147805325	211	hypothetical protein VITISV_032017 [Viti	0.663	0.981	0.5	2e-39
255550794	186	conserved hypothetical protein [Ricinus	0.583	0.978	0.571	6e-39
255546095	312	hypothetical protein RCOM_1046780 [Ricin	0.833	0.833	0.401	1e-38
356556282	315	PREDICTED: putative GATA transcription f	0.705	0.698	0.394	2e-34

>gi|118487597|gb|ABK95624.1| unknown [Populus trichocarpa]

 Score =  217 bits (553), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 161/326 (49%), Positives = 199/326 (61%), Gaps = 37/326 (11%)

Query: 1   MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQD------QRMI 54
           MTP +LNP   S PF    + +++Q+L L  S   ++AA+S    TNF +      QR  
Sbjct: 1   MTPAYLNPASSSFPFV---DLREEQNLQLFLSP--HQAATSLSGPTNFFNTSAHDHQRET 55

Query: 55  IMEESQQHD-QKVD-----HSGSSN-LQVFSSSSIQTKKMNNITNNKLPIRKREVGEGTT 107
              ES+QHD Q+VD     H GSS+  Q   +        +N++++K+     E GE   
Sbjct: 56  KPGESRQHDNQEVDMYNISHGGSSSSFQPEVNDHNYNSNFHNLSSSKMEDGAEESGE--- 112

Query: 108 SENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSS 167
                 SS KWM SK+RLM KM NS  N + T  + +K   K    Q  +N   +S   S
Sbjct: 113 ------SSVKWMPSKMRLMQKMTNS--NCSETDHMPMKFMLKFHNQQYQNNEINSS---S 161

Query: 168 NSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATG 227
           NSN+ +R CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKARRAM AAAA   GT+ A  
Sbjct: 162 NSNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIE 221

Query: 228 GSPFAK-IKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSA 286
            S   +  K+  K KK RT+HVSQNKK    L   P    QSQ+KLCFK+ A++LSKN A
Sbjct: 222 ASSSTRSTKVNNKVKKSRTNHVSQNKK----LSKPPESSLQSQKKLCFKNLALSLSKNPA 277

Query: 287 LKQVFPQDVEEAAILLMELSCGFIHS 312
           L+QV P DVEEAAILLMELSCGFIHS
Sbjct: 278 LQQVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429550|ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera] gi|296081660|emb|CBI20665.3| unnamed protein product [Vitis vinifera]

 Score =  211 bits (536), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 158/327 (48%), Positives = 199/327 (60%), Gaps = 36/327 (11%)

Query: 1   MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSH-NRAASSSVSWTNF-----QDQRMI 54
           MTPV LN    S PF   E ++D QH  LL S++  +  ASSS    +F     Q QR  
Sbjct: 1   MTPVFLNT-SSSSPFPALELKEDHQHFQLLFSTNPPSYQASSSHPCPSFFNSSTQSQRGD 59

Query: 55  -IMEESQQHDQKVD----HSGSSNLQVFSSSSI-QTKKMNNITNNKLPIRKREVGEGTTS 108
               + QQH+ K D    H G    QVFSSSS+ Q    +N +++KL + K+E G+    
Sbjct: 60  HSPRDPQQHEDKDDKYISHGGCGESQVFSSSSLLQPMADDNKSSHKLSVFKKEEGD---- 115

Query: 109 ENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSN 168
             G+ S+ KWMSSK+RLM KM+NS   +        K+ QK++ HQ  DN  +N FNSSN
Sbjct: 116 -EGNKSTEKWMSSKMRLMRKMMNSDCTT-------AKIEQKVEDHQQWDN--INEFNSSN 165

Query: 169 --SNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVET-GTIAA 225
             SN  +R CSDCNTT TPLWRSGPRGPKSLCNACGIRQRKARRAM AAAA    GT   
Sbjct: 166 NTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAAANGTAVG 225

Query: 226 TGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNS 285
           T  SP  K+KL  K+KK  TS+V Q KK  +           +++KLCF+DF  ++ KNS
Sbjct: 226 TEISPM-KMKLPNKEKKMHTSNVGQQKKLCKP-----PCPPPTEKKLCFEDFTSSICKNS 279

Query: 286 ALKQVFPQDVEEAAILLMELSCGFIHS 312
             ++VFP+D EEAAILLM LSC  ++S
Sbjct: 280 GFRRVFPRDEEEAAILLMALSCDLVYS 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088836|ref|XP_002308561.1| predicted protein [Populus trichocarpa] gi|222854537|gb|EEE92084.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/209 (59%), Positives = 144/209 (68%), Gaps = 14/209 (6%)

Query: 109 ENGSSSSG----KWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSF 164
           E+G+  SG    KWM SK+RLM KM NS  N + T  + +K   K    Q  +N   +S 
Sbjct: 35  EDGAEESGESSVKWMPSKMRLMQKMTNS--NCSETDHMPMKFMLKFHNQQYQNNEINSS- 91

Query: 165 NSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIA 224
             SNSN+ +R CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKARRAM AAAA   GT+ 
Sbjct: 92  --SNSNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVI 149

Query: 225 ATGGSPFAK-IKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSK 283
           A   S   +  K+  K KK RT+HVSQNKK    L   P    QSQ+KLCFK+ A++LSK
Sbjct: 150 AIEASSSTRSTKVNNKVKKSRTNHVSQNKK----LSKPPESSLQSQKKLCFKNLALSLSK 205

Query: 284 NSALKQVFPQDVEEAAILLMELSCGFIHS 312
           N AL+QV P DVEEAAILLMELSCGFIHS
Sbjct: 206 NPALQQVLPHDVEEAAILLMELSCGFIHS 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489347|gb|ABK96478.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 193/325 (59%), Gaps = 35/325 (10%)

Query: 1   MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNF----QDQRMIIM 56
           MTPV+LNP   S PF    + K++QHL L  S   ++AA+S    TNF     DQR   +
Sbjct: 1   MTPVYLNPASSSFPFV---DLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRESKL 55

Query: 57  EESQQHD-QKVDHSG-----SSNLQVFSSSSIQ--TKKMNNITN-NKLPIRKREVGEGTT 107
            ES+QHD  +VD        SS+ ++F SSS Q      ++ +N +KL   K E G    
Sbjct: 56  AESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDSNFHKLFSSKTEDG---- 111

Query: 108 SENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSS 167
           +E    SS  WM S++  M +M NS  N + T    +K   K    Q  +N       +S
Sbjct: 112 TEGSGDSSVNWMPSRMTTMQEMSNS--NRSETDHQPMKFMLKFHNQQCQNNDI-----NS 164

Query: 168 NSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATG 227
           +SN+ +R CSDCNTT+TPLWRSGPRGPKSLCNACGI   + R+A +A AA E G + +  
Sbjct: 165 SSNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGI---RQRKARRAMAAAENGAVISVE 221

Query: 228 GSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSAL 287
            S   K K+  K KK RTSHV Q KK      P+P    QSQ+KLCFK+ A++LSKN AL
Sbjct: 222 ASSSTKSKVNSKVKKLRTSHVVQGKK-LSNKPPNPP--LQSQKKLCFKNLALSLSKNPAL 278

Query: 288 KQVFPQDVEEAAILLMELSCGFIHS 312
           +QV P DVEEAAILLMELSCGFIHS
Sbjct: 279 RQVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488977|gb|ABK96296.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 191/324 (58%), Gaps = 30/324 (9%)

Query: 1   MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNF----QDQRMIIM 56
           MTPV+LNP   S PF    + K++QHL L  S   ++AA+S    TNF     DQR   +
Sbjct: 1   MTPVYLNPASSSFPFV---DLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRESKL 55

Query: 57  EESQQHD-QKVDHSG-----SSNLQVFSSSSIQ--TKKMNNITNNKLPIRKREVGEGTTS 108
            ES+QHD  +VD        SS+ ++F SSS Q      ++  +N   +   +  +GT  
Sbjct: 56  AESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDDSNFHKLFSSKTEDGT-- 113

Query: 109 ENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSN 168
           E    SS  WM S++  M +M  ++SN + T    +K   K    Q  +N    +   S+
Sbjct: 114 EGSGDSSVNWMPSRMTTMQEM--TTSNRSETDHQPMKFMLKFHNQQCQNNVNDIN---SS 168

Query: 169 SNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGG 228
           SN+ +R CSDCNTT+TPLWRSGPRGPKSLCNACGI   + R+A +A AA E G + +   
Sbjct: 169 SNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGI---RQRKARRAMAAAENGAVISVEA 225

Query: 229 SPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALK 288
           S   K K+  K KK RTSHV Q KK      P+P    QSQ+KLCFK+ A++LSKN  L+
Sbjct: 226 SSSTKSKVNSKVKKLRTSHVVQGKK-LSNKPPNPP--LQSQKKLCFKNLALSLSKNPVLR 282

Query: 289 QVFPQDVEEAAILLMELSCGFIHS 312
           QV P DVEEAAILLMELSCGFIHS
Sbjct: 283 QVLPHDVEEAAILLMELSCGFIHS 306

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554076|ref|XP_003545375.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/326 (39%), Positives = 177/326 (54%), Gaps = 36/326 (11%)

Query: 1   MTPVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQDQRMI------ 54
           MTP  LNPP  S   Q  + Q       L + S +N+   +   + N  D R        
Sbjct: 1   MTPYSLNPPGPS--IQAGQNQ-------LFNISPNNQDCRT---FFNIFDPRQTSIEIGG 48

Query: 55  IMEESQQHDQKVDHSGSSNLQVFSSSSI-QTKKMNNITNNKLPIRKREVGEGTTSENGSS 113
           + E  +Q D+ + H GSS+    S +   +T  M +  ++    R+    E  +  N   
Sbjct: 49  LRENYRQDDKMILHDGSSSNCNSSFNISPETVVMVDPLSSACD-RRNLPSEEESKNNDHG 107

Query: 114 SSGKWMSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNN-- 171
           S  KWMSSK+RLM KM+  S   + T + A+  + + Q HQ  ++   +  +  N+N   
Sbjct: 108 SGNKWMSSKMRLMKKMMRPSI--SPTTDKAINSSPRFQNHQGLESRRYSQRSPRNNNGSS 165

Query: 172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPF 231
           T R CSDCNT+TTPLWR+GP+GPKSLCNACGIRQRKARRAM  AA      IA       
Sbjct: 166 TPRVCSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKARRAMAEAANGLVTPIAC------ 219

Query: 232 AKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQ---RKL-CFKDFAIAL-SKNSA 286
            K +L  K+KK R +H +Q K +Y++     T    S    RKL  F +FAI+L S NS 
Sbjct: 220 EKTRLHNKEKKSRMNHFAQFKNKYKSTTTTTTTTVGSSEGVRKLEYFNNFAISLRSNNSD 279

Query: 287 LKQVFPQD-VEEAAILLMELSCGFIH 311
            +Q+FP+D V EAA+LLM+LSCGF+H
Sbjct: 280 FEQMFPRDEVAEAALLLMDLSCGFVH 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805325|emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/226 (50%), Positives = 148/226 (65%), Gaps = 19/226 (8%)

Query: 88  NNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSKIRLMHKMINSSSNSTATHELAVKVT 147
           +N +++KL + K+E G+      G+ S+ KWMSSK+RLM KM+NS   +        K+ 
Sbjct: 4   DNKSSHKLSVFKKEEGD-----EGNKSTEKWMSSKMRLMRKMMNSDCTT-------AKIE 51

Query: 148 QKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           QK++ HQ  DN    + +++ SN  +R CSDCNTT TPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 52  QKVEDHQQWDNINEXNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 111

Query: 208 ARRAMQAAAAVET-GTIAATGGSPFAKIKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQY 266
           ARRAM AAAA    GT   T  SP  K+KL  K+KK  TS+V Q KK  +          
Sbjct: 112 ARRAMAAAAAAAANGTAVGTEISPM-KMKLPNKEKKMHTSNVGQQKKLCKP-----PCPP 165

Query: 267 QSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIHS 312
            +++KLCF+DF  ++ KNS  ++VFP+D EEAAILLM LSC  ++S
Sbjct: 166 PTEKKLCFEDFTSSICKNSGFRRVFPRDEEEAAILLMALSCDLVYS 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550794|ref|XP_002516445.1| conserved hypothetical protein [Ricinus communis] gi|223544265|gb|EEF45786.1| conserved hypothetical protein [Ricinus communis]

 Score =  167 bits (423), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/196 (57%), Positives = 136/196 (69%), Gaps = 14/196 (7%)

Query: 119 MSSKIRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHD--NSEVNSFNSSNSNNTMRAC 176
           M SK+R+M KM+NS  N    ++  VK T K Q HQ +   N+E+NS + SN NN +R C
Sbjct: 1   MPSKMRIMQKMMNS--NCFEFNDKPVKFTVKFQDHQQYQATNNEINS-SCSNGNNNIRVC 57

Query: 177 SDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAKIKL 236
           SDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAM AAAA+   T +            
Sbjct: 58  SDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAIAMETSSTKAA-------- 109

Query: 237 QIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQR-KLCFKDFAIALSKNSALKQVFPQDV 295
           ++K+KK RT H SQ KK  +  D  P    Q Q+ K+ FK+ A++LS NSAL++VFP+DV
Sbjct: 110 KVKEKKSRTGHASQCKKLCKPPDHPPPPYNQGQKPKVSFKNLALSLSNNSALQRVFPEDV 169

Query: 296 EEAAILLMELSCGFIH 311
           EEAA LLMELSCGFIH
Sbjct: 170 EEAATLLMELSCGFIH 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546095|ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus communis] gi|223546563|gb|EEF48061.1| hypothetical protein RCOM_1046780 [Ricinus communis]

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 169/316 (53%), Gaps = 56/316 (17%)

Query: 3   PVHLNPPHDSDPFQLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQDQRMIIMEESQQH 62
           P+ +NPP +    ++    K+ Q LH  H    N  AS   SW    D R+I        
Sbjct: 45  PIFINPPQE----EVGYYHKELQPLH--HQEVDNIYASHGRSW----DHRII-------- 86

Query: 63  DQKVDHSGSSNLQVFSSSSIQTKKMNNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSK 122
                                  K  N    +L + K+E    +  +   +SS KWMSSK
Sbjct: 87  -----------------------KNENENGQELSVCKKEDKSTSIEDQRDNSSVKWMSSK 123

Query: 123 IRLMHKM------INSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRAC 176
           +RLM KM      +N++ ++++ H+L  K  +K +   L D+    +  S NSNNT+R C
Sbjct: 124 MRLMRKMMTTDQTVNTTQHTSSMHKLEDK--EKSRSLPLQDDYSSKNL-SDNSNNTIRVC 180

Query: 177 SDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAKIKL 236
           SDCNTT TPLWRSGPRGPKSLCNACGIRQRKARRA+ AA A   GTI A   +     K+
Sbjct: 181 SDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRALAAAQASANGTIFAPDTAAMKTNKV 240

Query: 237 QIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQRKLCFKDF-AIALSKNSALKQVFPQDV 295
           Q K+K+   SH+   K+   T          S++KLCF+D  +  LSKNSA +Q+FPQD 
Sbjct: 241 QNKEKRTNNSHLPFKKRCKFT-----AQSRGSRKKLCFEDLSSTILSKNSAFQQLFPQDE 295

Query: 296 EEAAILLMELSCGFIH 311
           +EAAILLM LS G +H
Sbjct: 296 KEAAILLMALSYGLVH 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556282|ref|XP_003546455.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 140/256 (54%), Gaps = 36/256 (14%)

Query: 75  QVFSSSSIQTKKMNNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSKIRLMHKMINSSS 134
           Q    SS  ++K  N ++ KL + K+E  +   +  G  +S KWM  K+R+M +++ S  
Sbjct: 70  QKIVPSSGLSEKDENKSDLKLRVWKKE--DKCENFQGEDNSTKWMPLKMRMMRRLMVSDQ 127

Query: 135 NSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNN---------TMRACSDCNTTTTP 185
             +   E  +  +QK++Y +   NS ++   + +SN          T+R CSDC+TT TP
Sbjct: 128 TGSDDTEGMISNSQKIKYEE--KNSPLSPLGTDDSNYNSSSNHSNITVRVCSDCHTTKTP 185

Query: 186 LWRSGPRGPKSLCNACGIRQRKARRAMQAAAAVETGTIAATGGSPFAKIKLQIKDKKPRT 245
           LWRSGP+GPKSLCNACGIRQRK RRA+ AAA        + G +P    K Q+  KK  T
Sbjct: 186 LWRSGPKGPKSLCNACGIRQRKVRRAIAAAA-------TSNGTNPVEAEKSQV--KKGNT 236

Query: 246 SHVSQNKKQYRTLDPDPTHQYQSQRKL---------CFKDFAIALSKNSALKQVFPQDVE 296
            H    K +      +   Q +  RKL          F+D  + LSKN AL+QVFPQD +
Sbjct: 237 LHSKGMKSKT-----EGAQQMKKNRKLGARYRKRFGAFEDLTVRLSKNFALQQVFPQDEK 291

Query: 297 EAAILLMELSCGFIHS 312
           EAAILLM LS G +H 
Sbjct: 292 EAAILLMALSYGLLHG 307

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2120845	352	CGA1 "cytokinin-responsive gat	0.435	0.386	0.420	3.9e-24
TAIR|locus:2170277	398	GNC "GATA, nitrate-inducible,	0.099	0.077	0.903	2e-22
TAIR|locus:2155919	139	GATA16 "GATA transcription fac	0.096	0.215	0.733	1.4e-14
TAIR|locus:2093678	190	GATA17 "GATA transcription fac	0.102	0.168	0.75	3.6e-14
TAIR|locus:2148558	120	GATA23 "GATA transcription fac	0.102	0.266	0.75	4.9e-14
TAIR|locus:504955441	197	AT4G16141 [Arabidopsis thalian	0.102	0.162	0.718	8.8e-13
TAIR|locus:2083388	149	GATA15 "GATA transcription fac	0.096	0.201	0.7	4.7e-12
TAIR|locus:2115195	211	GATA19 "GATA transcription fac	0.285	0.421	0.350	2.2e-11
TAIR|locus:2062095	208	GATA20 "GATA transcription fac	0.096	0.144	0.766	1.6e-09
TAIR|locus:2077932	295	MNP "MONOPOLE" [Arabidopsis th	0.096	0.101	0.8	5.8e-09

TAIR|locus:2120845 CGA1 "cytokinin-responsive gata factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 66/157 (42%), Positives = 78/157 (49%)

Query:   173 MRACSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXXXXXXXXXXXXXSPFA 232
             +R CSDCNTT TPLWRSGPRGPKSLCNACGI                          P  
Sbjct:   198 IRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVS---PPVM 254

Query:   233 KIKLQIKDK---------KPRTSHVSQNKK----QYRTLDPDPTHQ-----YQSQRKLCF 274
             K K+Q K+K          P    V+  K+    +   L  D   Q       S   + F
Sbjct:   255 KKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYF 314

Query:   275 KDFAIALSKNSALKQVFPQDVEEAAILLMELSCGFIH 311
              D A+ LSK+SA +QVFPQD +EAAILLM LS G +H
Sbjct:   315 DDLALLLSKSSAYQQVFPQDEKEAAILLMALSHGMVH 351

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2170277 GNC "GATA, nitrate-inducible, carbon metabolism-involved" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
 Identities = 28/31 (90%), Positives = 29/31 (93%)

Query:   173 MRACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             +R CSDCNTT TPLWRSGPRGPKSLCNACGI
Sbjct:   229 IRVCSDCNTTKTPLWRSGPRGPKSLCNACGI 259

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010255 "glucose mediated signaling pathway" evidence=IMP

GO:0051171 "regulation of nitrogen compound metabolic process" evidence=IEP;IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2155919 GATA16 "GATA transcription factor 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query:   174 RACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             + C+DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    36 KTCADCGTSKTPLWRGGPVGPKSLCNACGI 65

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2093678 GATA17 "GATA transcription factor 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
 Identities = 24/32 (75%), Positives = 24/32 (75%)

Query:   172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             T R C DC T  TPLWR GP GPKSLCNACGI
Sbjct:    40 TKRTCVDCGTIRTPLWRGGPAGPKSLCNACGI 71

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2148558 GATA23 "GATA transcription factor 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query:   172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             T+R CS+C TT TP+WR GP GPKSLCNACGI
Sbjct:    24 TIRCCSECKTTKTPMWRGGPTGPKSLCNACGI 55

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

GO:0048527 "lateral root development" evidence=IMP

TAIR|locus:504955441 AT4G16141 [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query:   172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             T + C DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    35 TKKTCVDCGTSRTPLWRGGPAGPKSLCNACGI 66

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2083388 GATA15 "GATA transcription factor 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query:   174 RACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             ++C+ C T+ TPLWR GP GPKSLCNACGI
Sbjct:    41 KSCAICGTSKTPLWRGGPAGPKSLCNACGI 70

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2115195 GATA19 "GATA transcription factor 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 34/97 (35%), Positives = 45/97 (46%)

Query:   174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXXXXXXXXXXXXXSPFAK 233
             R C++C+TT+TPLWR+GPRGPKSLCNACGI                          P   
Sbjct:    75 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAAGVPTL- 133

Query:   234 IKLQIKDKKPRTSHVSQNKKQYRTLDPDPTHQYQSQR 270
                   D +   ++   N  QY +  P   HQ+ +QR
Sbjct:   134 ------DHQASANYYYNNNNQYASSSPWH-HQHNTQR 163

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2062095 GATA20 "GATA transcription factor 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 23/30 (76%), Positives = 28/30 (93%)

Query:   174 RACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             R C+ C+TT+TPLWR+GP+GPKSLCNACGI
Sbjct:    92 RRCASCDTTSTPLWRNGPKGPKSLCNACGI 121

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2077932 MNP "MONOPOLE" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query:   174 RACSDCNTTTTPLWRSGPRGPKSLCNACGI 203
             R C++C+TT+TPLWR+GPRGPKSLCNACGI
Sbjct:   152 RRCANCDTTSTPLWRNGPRGPKSLCNACGI 181

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IEP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048446 "petal morphogenesis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013019801 SubName- Full=Putative uncharacterized protein; (234 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	5e-17
pfam00320	36	pfam00320, GATA, GATA zinc finger	3e-16
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	8e-14

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 73.2 bits (180), Expect = 5e-17
 Identities = 22/42 (52%), Positives = 28/42 (66%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAA 215
           R+CS+C TT TPLWR GP G K+LCNACG+  +K     +  
Sbjct: 4   RSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGLKRPL 45

Length = 52

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 70.8 bits (174), Expect = 3e-16
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 176 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR 210
           CS+C TT TPLWR GP G ++LCNACG+  RK   
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGL 35

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 64.7 bits (158), Expect = 8e-14
 Identities = 22/41 (53%), Positives = 27/41 (65%)

Query: 175 ACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQAA 215
           ACS+C TTTTPLWR GP G  +LCNACG+  +K       +
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHGVMRPLS 41

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.45
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.44
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.44
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	98.68
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	97.93
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	83.37

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.45  E-value=1.6e-14  Score=106.56  Aligned_cols=39  Identities=56%  Similarity=1.099  Sum_probs=35.0

Q ss_pred             ccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHHH
Q 021455          175 ACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQ  213 (312)
Q Consensus       175 ~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~~  213 (312)
                      .|+||++++||+||+||.|..+|||||||||++....++
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~~~~rp   39 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHGVMRP   39 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhcCCCCC
Confidence            599999999999999998889999999999999664444

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.44  E-value=2.4e-14  Score=104.59  Aligned_cols=40  Identities=55%  Similarity=1.121  Sum_probs=36.6

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHH
Q 021455          172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRA  211 (312)
Q Consensus       172 ~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~  211 (312)
                      .++.|+||+++.||+||+||.|+..|||||||||+++.+.
T Consensus         2 ~~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~~   41 (52)
T smart00401        2 SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGL   41 (52)
T ss_pred             CCCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCCC
Confidence            4788999999999999999999889999999999996654

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.44  E-value=2.3e-14  Score=97.73  Aligned_cols=35  Identities=54%  Similarity=1.225  Sum_probs=28.1

Q ss_pred             cccCCCCCCCccccCCCCCcccchhHHHHHHHhhH
Q 021455          176 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR  210 (312)
Q Consensus       176 CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k  210 (312)
                      |++|++++||+||+||.|..+|||||||+|+++++
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~~   35 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYGK   35 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHSS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhCC
Confidence            89999999999999999987799999999999764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=98.68  E-value=7.5e-09  Score=88.14  Aligned_cols=37  Identities=68%  Similarity=1.423  Sum_probs=35.1

Q ss_pred             CcccccCCCCCCCccccCCCCCcccchhHHHHHHHhh
Q 021455          173 MRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  209 (312)
Q Consensus       173 ~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~  209 (312)
                      ...|.+|+++.||+||+++.|++.+|||||++|++..
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~  235 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGG  235 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcC
Confidence            6899999999999999999998899999999999975

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=97.93  E-value=1.6e-06  Score=88.20  Aligned_cols=40  Identities=43%  Similarity=0.926  Sum_probs=35.6

Q ss_pred             CCcccccCCCCCCCccccCCC-----CCcccchhHHHHHHHhhHHH
Q 021455          172 TMRACSDCNTTTTPLWRSGPR-----GPKSLCNACGIRQRKARRAM  212 (312)
Q Consensus       172 ~~r~CsnC~Tt~TP~WRrGP~-----G~~~LCNACGL~~rk~~k~~  212 (312)
                      ...+|.||.|+.||+|||+..     | -+|||||||+|+.+.+.+
T Consensus       157 ~~~vc~Nc~t~stPlwrR~~~~~s~~~-n~lcnaCgl~~klhg~~r  201 (498)
T COG5641         157 QPHVCSNCKTTSTPLWRRASSESSLPG-NNLCNACGLYLKLHGSPR  201 (498)
T ss_pred             ccchhccccccCCccccccccccccCC-ccccccccccccccCCcC
Confidence            445999999999999999999     6 599999999999977666

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=83.37  E-value=0.88  Score=47.57  Aligned_cols=39  Identities=36%  Similarity=0.653  Sum_probs=31.5

Q ss_pred             CCCcccccCCCCCCCcc-ccCCCC-CcccchhHHHHHHHhh
Q 021455          171 NTMRACSDCNTTTTPLW-RSGPRG-PKSLCNACGIRQRKAR  209 (312)
Q Consensus       171 ~~~r~CsnC~Tt~TP~W-RrGP~G-~~~LCNACGL~~rk~~  209 (312)
                      ..++.|-+|+|++.-+| .-||.| .+.||-.|=+||+|..
T Consensus       384 ~~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKKyg  424 (693)
T KOG3554|consen  384 QDGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKKYG  424 (693)
T ss_pred             CCCCcccccccccccceeccCCCCccchhhHHHHHHHHHhc
Confidence            44889999999999999 345444 4679999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	312
2vus_I	43	Crystal Structure Of Unliganded Nmra-Area Zinc Fing		3e-04

>pdb|2VUS|I Chain I, Crystal Structure Of Unliganded Nmra-Area Zinc Finger Complex Length = 43

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 176 CSDCNTTTTPLWRSGPRGPKSLCNACGI 203
           C++C T TTPLWR  P G + LCNACG+
Sbjct: 4   CTNCFTQTTPLWRRNPEG-QPLCNACGL 30

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	312
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	7e-14
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	5e-13
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	4e-11
3dfx_A	63	Trans-acting T-cell-specific transcription factor	1e-09
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 64.5 bits (157), Expect = 7e-14
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 167 SNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           S+ N     CS+C+ T T  WR+        CNAC I QRK
Sbjct: 2   SHMNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRK 42

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 61.7 bits (150), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 5   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 37

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 56.3 bits (136), Expect = 4e-11
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 176 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 4   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 34

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 52.7 bits (126), Expect = 1e-09
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 167 SNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR 210
           S +     +C++C TTTT LWR    G   +CNACG+  +    
Sbjct: 1   SAARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNI 43

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 51.2 bits (122), Expect = 4e-09
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 167 SNSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR 210
           +   N    C++C T TTPLWR  P G + LCNACG+  +    
Sbjct: 3   NGEQNGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHGV 45

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 9e-08
 Identities = 51/361 (14%), Positives = 95/361 (26%), Gaps = 133/361 (36%)

Query: 16  QLAEEQKDDQHLHLLHSSSHNRAASSSVSWTNFQDQRMIIMEESQQHDQKVDH------- 68
            +  EQ+    +  ++    +R  + +  +  +   R+    + +Q   ++         
Sbjct: 97  PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 69  ----SGSSNL--QVFSSSSIQTKKMNNITNNKLPIRKREVGEGTTSENGSSSSGKWMSSK 122
               SG + +   V  S  +Q K    I                           W++ K
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIF--------------------------WLNLK 190

Query: 123 IRLMHKMINSSSNSTATHELAVKVTQKLQYHQLHDNSEVNSFNSSNSNNTMRACSDCNTT 182
                        +  + E  +++ QKL  +Q+  N    S    +S+N           
Sbjct: 191 -------------NCNSPETVLEMLQKL-LYQIDPNWTSRS---DHSSNIKLRIHSIQAE 233

Query: 183 TTPLWRSGPRGPKSL------CNA---------CGI----RQRKARRAMQAAAAV----- 218
              L +S       L       NA         C I    R ++    + AA        
Sbjct: 234 LRRLLKS-KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 219 ---------ETGTI--------------AATGGSPF--AKIKLQIKDKKPR---TSHVSQ 250
                    E  ++                   +P   + I   I+D         HV+ 
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 251 NKKQ------YRTLDPDPTHQYQSQRKLCFKDFAIALSKNSALKQVFPQDVEEAAILLME 304
           +K           L+P         RK  F   ++           FP       ILL  
Sbjct: 353 DKLTTIIESSLNVLEPA------EYRK-MFDRLSV-----------FPPSAHIPTILLSL 394

Query: 305 L 305
           +
Sbjct: 395 I 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.65
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.63
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.59
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.57
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.54
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.41
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.24

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.65  E-value=7.3e-17  Score=121.97  Aligned_cols=43  Identities=35%  Similarity=0.781  Sum_probs=38.0

Q ss_pred             CCCCCCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHH
Q 021455          168 NSNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRA  211 (312)
Q Consensus       168 ~s~~~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~  211 (312)
                      ++......|.+|++++||+||+||+|+ +|||||||+|++++..
T Consensus         2 ~~~~~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~~~~~   44 (63)
T 3dfx_A            2 AARRAGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKLHNIN   44 (63)
T ss_dssp             CCCCTTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHHHSSC
T ss_pred             CCCCCCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHHcCCC
Confidence            456678899999999999999999996 9999999999995543

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.63  E-value=1.4e-16  Score=121.20  Aligned_cols=43  Identities=42%  Similarity=0.859  Sum_probs=37.3

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHHH
Q 021455          170 NNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQ  213 (312)
Q Consensus       170 ~~~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~~  213 (312)
                      .+..+.|++|+|++||+||+||+|. +|||||||||+++.+.++
T Consensus         6 ~~~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~~~~~~RP   48 (66)
T 4gat_A            6 QNGPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGVVRP   48 (66)
T ss_dssp             SSSSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHHHHCSCCC
T ss_pred             CCCCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHHHcCCCCc
Confidence            4568999999999999999999996 999999999998544333

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.59  E-value=1.6e-16  Score=112.05  Aligned_cols=38  Identities=45%  Similarity=0.964  Sum_probs=34.2

Q ss_pred             cccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHH
Q 021455          174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAM  212 (312)
Q Consensus       174 r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~  212 (312)
                      +.|++|++++||+||+||+|+ +|||||||||+++++.+
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~~R   39 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGVVR   39 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHHHHSSCC
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHHHhCCCC
Confidence            679999999999999999996 99999999999965443

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.57  E-value=3.7e-16  Score=111.62  Aligned_cols=38  Identities=42%  Similarity=0.974  Sum_probs=34.4

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhH
Q 021455          172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR  210 (312)
Q Consensus       172 ~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k  210 (312)
                      ..+.|++|++++||+||+||+|+ +|||||||||+++.+
T Consensus         3 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   40 (46)
T 1gnf_A            3 EARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQ   40 (46)
T ss_dssp             CSCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHHHTCS
T ss_pred             CCCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHHHcCC
Confidence            46789999999999999999996 999999999999543

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.54  E-value=2.2e-15  Score=116.26  Aligned_cols=45  Identities=36%  Similarity=0.529  Sum_probs=34.2

Q ss_pred             CCCCCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHHH
Q 021455          169 SNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQ  213 (312)
Q Consensus       169 s~~~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~~  213 (312)
                      +......|+||+|++||+||+|+.+..+|||||||||+++.+.++
T Consensus         4 ~~~~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~~~~~~RP   48 (71)
T 2kae_A            4 MNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRP   48 (71)
T ss_dssp             ----CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHHSCCC
T ss_pred             CCCCCCcCCccCCCCCCccccCCCCCCccchHHHHHHHHhCCCCC
Confidence            456789999999999999999543334999999999999665544

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.41  E-value=9.1e-14  Score=115.00  Aligned_cols=44  Identities=34%  Similarity=0.761  Sum_probs=38.1

Q ss_pred             CCCCCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHHH
Q 021455          169 SNNTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMQ  213 (312)
Q Consensus       169 s~~~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~~  213 (312)
                      .......|++|+|+.||+||+||+| ++|||||||||+++...++
T Consensus        55 ~~~~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~rp   98 (115)
T 4hc9_A           55 ARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNINRP   98 (115)
T ss_dssp             CCCTTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSCCC
T ss_pred             cccccccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCCCC
Confidence            3455789999999999999999999 8999999999999655444

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.24  E-value=6.1e-12  Score=104.05  Aligned_cols=36  Identities=44%  Similarity=1.024  Sum_probs=31.7

Q ss_pred             CCCcccccCCCCCCCccccCCCCCcccchhHHHHHHH
Q 021455          171 NTMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK  207 (312)
Q Consensus       171 ~~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk  207 (312)
                      ..++.|.||+++.||+||+||+| .+|||||||||++
T Consensus         3 ~~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~Kl   38 (115)
T 4hc9_A            3 HMGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHKM   38 (115)
T ss_dssp             ---CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCcceECCCC-CCcCcchhhhhhh
Confidence            35789999999999999999999 7999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	7e-13
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	1e-10
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	3e-08

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.7 bits (145), Expect = 7e-13
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 35

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 53.3 bits (128), Expect = 1e-10
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 176 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 207
           C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 33

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.7 bits (113), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 174 RACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARR 210
             CS+C T+TT LWR  P G   +CNACG+  +  + 
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV 40

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.64
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.63
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.62

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=1.7e-17  Score=113.62  Aligned_cols=36  Identities=44%  Similarity=1.031  Sum_probs=33.4

Q ss_pred             CcccccCCCCCCCccccCCCCCcccchhHHHHHHHhh
Q 021455          173 MRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  209 (312)
Q Consensus       173 ~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~  209 (312)
                      .++|++|++++||+||+||.| ++|||||||||+++.
T Consensus         2 ~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~G   37 (39)
T d1y0ja1           2 ARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMNG   37 (39)
T ss_dssp             CCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHSC
T ss_pred             cCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHhC
Confidence            678999999999999999999 699999999999853

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.63  E-value=1.6e-17  Score=115.35  Aligned_cols=37  Identities=46%  Similarity=1.007  Sum_probs=33.1

Q ss_pred             ccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHH
Q 021455          175 ACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAM  212 (312)
Q Consensus       175 ~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~  212 (312)
                      .|+||++++||+||+||+| ++|||||||||+++.+.|
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~g~~R   38 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHGVVR   38 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHHSSCC
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHcCCCC
Confidence            5999999999999999999 799999999999854433

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.62  E-value=1.1e-16  Score=120.16  Aligned_cols=40  Identities=40%  Similarity=0.874  Sum_probs=35.1

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchhHHHHHHHhhHHH
Q 021455          172 TMRACSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAM  212 (312)
Q Consensus       172 ~~r~CsnC~Tt~TP~WRrGP~G~~~LCNACGL~~rk~~k~~  212 (312)
                      .+.+|+||+|++||+||+||.| .+|||||||||+++...+
T Consensus         3 ~g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~~R   42 (66)
T d3gata_           3 AGTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQVNR   42 (66)
T ss_dssp             TTCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCSCC
T ss_pred             CCCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCCcC
Confidence            4678999999999999999999 699999999999954433