Citrus Sinensis ID: 021470
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 312 | 2.2.26 [Sep-21-2011] | |||||||
| P52581 | 312 | Isoflavone reductase homo | N/A | no | 1.0 | 1.0 | 0.666 | 1e-129 | |
| E1U332 | 308 | Isoflavone reductase-like | N/A | no | 0.977 | 0.990 | 0.471 | 5e-77 | |
| P52577 | 310 | Isoflavone reductase homo | no | no | 0.971 | 0.977 | 0.482 | 5e-76 | |
| P52578 | 308 | Isoflavone reductase homo | N/A | no | 0.971 | 0.983 | 0.458 | 3e-75 | |
| P52579 | 310 | Isoflavone reductase homo | N/A | no | 0.977 | 0.983 | 0.474 | 7e-75 | |
| P52580 | 309 | Isoflavone reductase homo | N/A | no | 0.967 | 0.977 | 0.457 | 6e-69 | |
| Q00016 | 318 | Isoflavone reductase OS=C | N/A | no | 0.967 | 0.949 | 0.421 | 8e-65 | |
| P52576 | 318 | Isoflavone reductase OS=P | N/A | no | 0.971 | 0.952 | 0.403 | 7e-64 | |
| P52575 | 318 | Isoflavone reductase OS=M | N/A | no | 0.971 | 0.952 | 0.403 | 2e-63 | |
| Q15GI3 | 323 | Isoeugenol synthase 1 OS= | N/A | no | 0.955 | 0.922 | 0.404 | 4e-61 |
| >sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 208/312 (66%), Positives = 270/312 (86%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M KSKVL++GGTGY+G+R+VKASL GHET++L RPEIG+DIEK+Q+LLSFK+QGA LV
Sbjct: 1 MGKSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEIGLDIEKLQILLSFKKQGAILVE 60
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
SF+D++SLV+AVKLVDVVIC +SGVH RSH +L QLKLV+AIK+AGN+KRFLPSEFG D
Sbjct: 61 ASFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFLPSEFGMD 120
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
PA M +A+EPGRVTFD+KM VRKAIE+A IPFTY+SANCFAGYF G L Q ++LP +D
Sbjct: 121 PALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMKTLLPPRDK 180
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
V+L GDGN K +Y+DEDD+A YT+K I+DPRTLN+T+YLRPP+NIL+ +E++E WE+LIG
Sbjct: 181 VLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLRPPENILTHKELIEKWEELIG 240
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
K L+K+SIS+++FL+++K ++A QVG+ H+YH+ YEGCLTNFEIG G EAS+LYPE+
Sbjct: 241 KQLEKNSISEKDFLSTLKGLDFASQVGVGHFYHIFYEGCLTNFEIGENGEEASELYPEVN 300
Query: 301 YTTVEEYLRRYL 312
YT +++YL+ Y+
Sbjct: 301 YTRMDQYLKVYV 312
|
Lupinus albus (taxid: 3870) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: - |
| >sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/312 (47%), Positives = 212/312 (67%), Gaps = 7/312 (2%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+K+K+LIIGGTGY+GK +V+AS H T+ L R D K +++ FK G +++G
Sbjct: 3 DKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTILTG 62
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
D++SLV A+K VDVVI + + Q+ Q+K++ AIKEAGNVKRF PS+FGTD
Sbjct: 63 DLYDHESLVKAIKQVDVVISTVGQL-----QLADQVKIIAAIKEAGNVKRFFPSDFGTD- 116
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
+A+EP + +F+ K +R+AIE GIP+T+VSAN FAGY L L QP P +D V
Sbjct: 117 VDRCHAVEPAKSSFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKV 176
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
++LGDGN KA++ +E+DI YT+KA++D RTLN+ +Y++PPKNI S E+V WEK IGK
Sbjct: 177 IILGDGNAKAVFNEENDIGTYTIKAVDDARTLNKILYIKPPKNIYSFNELVALWEKKIGK 236
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPEIK 300
TL+K + +E+ L ++E + + + + +G LTNF+I GVEAS+LYP++K
Sbjct: 237 TLEKIYVPEEQVLKQIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVK 296
Query: 301 YTTVEEYLRRYL 312
YTTVEEYL +++
Sbjct: 297 YTTVEEYLDQFV 308
|
Olea europaea (taxid: 4146) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 284 bits (727), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 203/313 (64%), Gaps = 10/313 (3%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+L+IGGTGY+GK LV+AS GH T+ L R D K + + SFK+ G ++ G
Sbjct: 4 EKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHG 63
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
ND++SLV A+K VDVVI + S QIL Q K++ AIKEAGNVKRFLPSEFG D
Sbjct: 64 DLNDHESLVKAIKQVDVVISTVG-----SMQILDQTKIISAIKEAGNVKRFLPSEFGVD- 117
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ--PGSILPSKD 179
+A+EP + F K+ +R+ IE GIP+TY CF GY+L L Q PG P +D
Sbjct: 118 VDRTSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRD 177
Query: 180 SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239
V +LGDGN KA+ E+DIA YT+KA++DPRTLN+ +Y++P N LS E+V WEK I
Sbjct: 178 KVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKI 237
Query: 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPE 298
GK+L+K+ + +E+ L S++E V L+ H + TN I GVEAS+LYP+
Sbjct: 238 GKSLEKTHLPEEQLLKSIQESPIPINVVLS-INHAVFVNGDTNISIEPSFGVEASELYPD 296
Query: 299 IKYTTVEEYLRRY 311
+KYT+V+EYL +
Sbjct: 297 VKYTSVDEYLSYF 309
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 207/312 (66%), Gaps = 9/312 (2%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
KSK+L IGGTGY+GK +V+AS GH+T+VL R + K +++ +FK G V G
Sbjct: 4 KSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGD 63
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILL-QLKLVDAIKEAGNVKRFLPSEFGTDP 121
D++SLV A+K VDVVI + H +L Q+KL+ AIKEAGNVKRF PSEFG D
Sbjct: 64 LYDHESLVKAIKQVDVVISTVG------HALLADQVKLIAAIKEAGNVKRFFPSEFGNDV 117
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
++ +A+EP + F+ K +R+ +E GIPFTYV+ FAGY L L QPG+ P D V
Sbjct: 118 DRV-HAVEPAKAAFNTKAQIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDKV 176
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
V+LG GN KA++ E+DI YT+ A++DP+TLN+ +Y++PP NI++ E+V WEK GK
Sbjct: 177 VILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTGK 236
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPEIK 300
L++ + +E+ L +++E + VGL+ Y+ +G TNFEI GVEAS++YP++K
Sbjct: 237 NLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVK 296
Query: 301 YTTVEEYLRRYL 312
YT ++E L +Y+
Sbjct: 297 YTPIDEILNQYV 308
|
Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 280 bits (717), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 205/312 (65%), Gaps = 7/312 (2%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+LIIGGTGY+GK LV+ S GH T+ L R + EK +++ +FK G L+ G
Sbjct: 5 EKSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFG 64
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
++ +SL+ A+K VDVVI + G Q Q+ ++ AIKEAGN+KRFLPSEFG D
Sbjct: 65 DISNQESLLKAIKQVDVVISTVGG-----QQFTDQVNIIKAIKEAGNIKRFLPSEFGFD- 118
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
A A+EP F K+ +R+ IE GIP+TYV N FA +FL L Q + P +D V
Sbjct: 119 VDHARAIEPAASLFALKVRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKV 178
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
V+ GDGNPKAIYV E+DIA YT++A++DPRTLN+T+++RPP NILS E+V WE IGK
Sbjct: 179 VIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGK 238
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEI-GNEGVEASQLYPEIK 300
TL+K +S+E+ L ++E + L + V G NFE+ GVEA++LYP++K
Sbjct: 239 TLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVK 298
Query: 301 YTTVEEYLRRYL 312
YTTV+E+ +++
Sbjct: 299 YTTVDEFYNKFV 310
|
Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (666), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 193/315 (61%), Gaps = 13/315 (4%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+L++GGTGYLG+ +V AS LGH T L R D K +L SF++ G L+ G
Sbjct: 4 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 63
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
D SLV+AVK DVVI + S QI Q +LVDAIKEAGNVKRF PSEFG D
Sbjct: 64 DLYDQASLVSAVKGADVVISVLG-----SMQIADQSRLVDAIKEAGNVKRFFPSEFGLD- 117
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSIL---PSK 178
+EP + K+ +R+A E AGIP+TY A FAG+ GL + G +L P
Sbjct: 118 VDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGF---GLPKVGQVLAPGPPA 174
Query: 179 DSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238
D V+LGDG+ KA++V+E DIA YT+ A +DPR N+ +Y++PP N LS E++ WEK
Sbjct: 175 DKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKK 234
Query: 239 IGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIG-NEGVEASQLYP 297
GKT ++ + +E L ++E + L + G T FEI +GV+AS+LYP
Sbjct: 235 TGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYP 294
Query: 298 EIKYTTVEEYLRRYL 312
++KYTTV+EYL R+L
Sbjct: 295 DVKYTTVDEYLNRFL 309
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 247 bits (631), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 197/323 (60%), Gaps = 21/323 (6%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV------------QMLLS 50
++++L++G TG +G+ +V AS+ G+ TY L R G DI K ++L S
Sbjct: 4 QNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPG-DINKPSLVAAANPESKEELLQS 62
Query: 51 FKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVK 110
FK G L+ G ND+++LV A+K VD VIC + IL Q+K++ AIKEAGNVK
Sbjct: 63 FKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRL-----LILDQVKIIKAIKEAGNVK 117
Query: 111 RFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ 170
RF PSEFG D + +A++P R FD+K +R+ +E G+P+TY+ + F GYFL L Q
Sbjct: 118 RFFPSEFGLDVDRH-DAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQ 176
Query: 171 PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQRE 230
+ P +D V++LGDGN K YV E D+ YT++A NDPRTLN+ +++R P N L+ E
Sbjct: 177 FDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNE 236
Query: 231 VVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIG-NEG 289
VV WEK IGKTL+KS IS+E+ L + + L Y+ +G +EI +
Sbjct: 237 VVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKGDAV-YEIDPAKD 295
Query: 290 VEASQLYPEIKYTTVEEYLRRYL 312
EA LYP++KYTT +EYL +++
Sbjct: 296 AEAYDLYPDVKYTTADEYLDQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. Cicer arietinum (taxid: 3827) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (623), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 197/322 (61%), Gaps = 19/322 (5%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR-----------PEIGVDIEKVQMLLSF 51
++K+LI+G TG +G+ +V AS+ G+ TY L R E K ++L ++
Sbjct: 4 ENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKNY 63
Query: 52 KEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKR 111
+ G L+ G ND+++LVNA+K VD VICA + I Q+K++ AIKEAGNVKR
Sbjct: 64 QASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIED-----QVKVIKAIKEAGNVKR 118
Query: 112 FLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQP 171
F PSEFG D + +A+EP R F++K +R+ +E G+P+TY+ + F GYFL L Q
Sbjct: 119 FFPSEFGLDVDRH-DAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQI 177
Query: 172 GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREV 231
+ P +D VV+LGDGN + YV E D+ YT++A NDP TLN+ +++R P N L+ EV
Sbjct: 178 DATDPPRDKVVILGDGNVRGAYVTEADVGTYTIRAANDPNTLNKAVHIRLPNNYLTANEV 237
Query: 232 VETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIG-NEGV 290
+ WEK IGKTL+K+ +S+E+ L ++ ++ L Y+ +G +EI + V
Sbjct: 238 IALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKGDAV-YEIDPAKDV 296
Query: 291 EASQLYPEIKYTTVEEYLRRYL 312
EA YP++KYTT +EYL +++
Sbjct: 297 EAYDAYPDVKYTTADEYLNQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 203/322 (63%), Gaps = 19/322 (5%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG-VDIEKV----------QMLLSF 51
++K+LI+G TG +G+ +V AS+ G+ TY L R G V+ K+ +++ ++
Sbjct: 4 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELIDNY 63
Query: 52 KEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKR 111
+ G L+ G ND+++LV A+K VD+VICA + I Q+K++ AIKEAGNVK+
Sbjct: 64 QSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIED-----QVKIIKAIKEAGNVKK 118
Query: 112 FLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQP 171
F PSEFG D + A+EP R F++K +R+ IE G+P+TY+ + F GYFL L Q
Sbjct: 119 FFPSEFGLDVDRH-EAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQL 177
Query: 172 GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREV 231
+ P +D VV+LGDGN K YV E D+ +T++A NDP TLN+ +++R P+N L+Q EV
Sbjct: 178 DTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNEV 237
Query: 232 VETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIG-NEGV 290
+ WEK IGKTL+K+ +S+E+ L ++E ++ L Y+ +G +EI + +
Sbjct: 238 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDI 296
Query: 291 EASQLYPEIKYTTVEEYLRRYL 312
EAS+ YP++ YTT +EYL +++
Sbjct: 297 EASEAYPDVTYTTADEYLNQFV 318
|
Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa. Medicago sativa (taxid: 3879) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 5 |
| >sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (598), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 191/309 (61%), Gaps = 11/309 (3%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP-EIGVDIEKVQMLLSFKEQGAKLVSG 61
K K+LI+G TGYLGK +VKAS++LGH TY P + D K+Q+L F+ G + G
Sbjct: 5 KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYG 64
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
+++ LV K VD+VI ++ Q L QLK+++AIKEAGN+KRF+PSEFG +
Sbjct: 65 ELSEHDKLVAVFKEVDIVISTLA-----VPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEV 119
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
++ A+ + D+K +R+A E AGIPFT+VSAN YF+ L P + V
Sbjct: 120 DRV-RALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQ---KSEQV 175
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ G G+ KA+ E+D+A YT+KA +DPR NR + ++PPKNI+SQ ++V +WEK G
Sbjct: 176 TIYGSGDAKAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGS 235
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPEIK 300
TL+ + IS++E + + N+ + + +++ G +FE+ + +EAS+LYP
Sbjct: 236 TLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYN 295
Query: 301 YTTVEEYLR 309
YT+V+EYL+
Sbjct: 296 YTSVDEYLK 304
|
Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices. Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 312 | ||||||
| 225440211 | 312 | PREDICTED: isoflavone reductase homolog | 1.0 | 1.0 | 0.881 | 1e-163 | |
| 224138336 | 313 | phenylcoumaran benzylic ether reductase | 0.993 | 0.990 | 0.848 | 1e-157 | |
| 388496426 | 312 | unknown [Lotus japonicus] | 1.0 | 1.0 | 0.826 | 1e-154 | |
| 359806198 | 312 | uncharacterized protein LOC100780465 [Gl | 1.0 | 1.0 | 0.814 | 1e-153 | |
| 158263573 | 330 | (+)-pinoresinol-(+)-lariciresinol reduct | 0.993 | 0.939 | 0.822 | 1e-152 | |
| 255557643 | 313 | Isoflavone reductase, putative [Ricinus | 0.996 | 0.993 | 0.810 | 1e-149 | |
| 449453441 | 319 | PREDICTED: isoflavone reductase homolog | 0.993 | 0.971 | 0.816 | 1e-149 | |
| 158997688 | 315 | (+)-pinoresinol-(+)-lariciresinol reduct | 0.993 | 0.984 | 0.797 | 1e-148 | |
| 449500110 | 375 | PREDICTED: isoflavone reductase homolog | 0.993 | 0.826 | 0.816 | 1e-148 | |
| 68146501 | 326 | pinoresinol-lariciresinol reductase [Lin | 0.987 | 0.944 | 0.796 | 1e-147 |
| >gi|225440211|ref|XP_002283648.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/312 (88%), Positives = 294/312 (94%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
MEKSKVLIIGGTGYLG+RLVKASLA HETYVL RP++GVDIEKVQMLLSFKEQGA+LV
Sbjct: 1 MEKSKVLIIGGTGYLGRRLVKASLAQAHETYVLQRPDMGVDIEKVQMLLSFKEQGARLVL 60
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
GSFND+QSLV+AVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGN+KRFLPSEFGTD
Sbjct: 61 GSFNDHQSLVDAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNIKRFLPSEFGTD 120
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
PA+M NAMEPGRVTFDDKMVVRKAI+DAGIPFTYVSANCFAGYFLGGLCQPGSILPS+D
Sbjct: 121 PARMENAMEPGRVTFDDKMVVRKAIQDAGIPFTYVSANCFAGYFLGGLCQPGSILPSRDH 180
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
VVLLGDGN KAIYVDEDDIAMYT+K I+DPRTLN+T+YLRPP+NILSQREVVE WEKLIG
Sbjct: 181 VVLLGDGNQKAIYVDEDDIAMYTIKTIDDPRTLNKTLYLRPPQNILSQREVVEVWEKLIG 240
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
K L KSSISKEEFLA+MK QNYA QVGLTHYYHVCYEGCL NFEIG+E EASQLYPEI
Sbjct: 241 KQLHKSSISKEEFLATMKTQNYAEQVGLTHYYHVCYEGCLANFEIGDEAEEASQLYPEIN 300
Query: 301 YTTVEEYLRRYL 312
YTTV EY++RYL
Sbjct: 301 YTTVHEYMKRYL 312
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138336|ref|XP_002326577.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222833899|gb|EEE72376.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/310 (84%), Positives = 291/310 (93%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
KSKVL+IGGTGYLGKRLVKASL GHETYVL+RPEIGVDIEKVQMLLSFKEQGA LV GS
Sbjct: 4 KSKVLVIGGTGYLGKRLVKASLGQGHETYVLYRPEIGVDIEKVQMLLSFKEQGAHLVQGS 63
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 122
FND +SLV+AVKLVDVVICA+SGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA
Sbjct: 64 FNDQRSLVDAVKLVDVVICAVSGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 123
Query: 123 KMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV 182
KM NAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPG I+PS++ V
Sbjct: 124 KMENAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGHIIPSREHVS 183
Query: 183 LLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
+LG+G +AIYVDEDDIAMYT+K ++DPRTLN+T+Y+RPP NILSQREVV+ WEKLIGK
Sbjct: 184 ILGNGKERAIYVDEDDIAMYTIKTVDDPRTLNKTLYIRPPNNILSQREVVQIWEKLIGKE 243
Query: 243 LQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYT 302
L+KS+IS EEFLA M+EQ+YA QVGLTHYYHVCYEGCLTNFEIG+EG EAS+LYPE+KYT
Sbjct: 244 LRKSTISSEEFLACMREQDYAEQVGLTHYYHVCYEGCLTNFEIGDEGEEASELYPEVKYT 303
Query: 303 TVEEYLRRYL 312
TVE+Y++RYL
Sbjct: 304 TVEKYMKRYL 313
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388496426|gb|AFK36279.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/312 (82%), Positives = 289/312 (92%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
MEKSKVLI+GGTGYLGKRLVKA L GHETYVL RP+IGVDIE+VQ+LLSFKEQGAKLV
Sbjct: 1 MEKSKVLIVGGTGYLGKRLVKACLTQGHETYVLQRPDIGVDIERVQLLLSFKEQGAKLVK 60
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
GSFND+QSLVNAVKLVDVVICA SGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD
Sbjct: 61 GSFNDHQSLVNAVKLVDVVICATSGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
PA+M +A+EPGRVTFDDKMVVRKAI++A IPFTY+SANCFAGYFLGGLCQPGSI+PSK+S
Sbjct: 121 PARMEHALEPGRVTFDDKMVVRKAIQEANIPFTYISANCFAGYFLGGLCQPGSIIPSKES 180
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
VVL GDG+ KAIYVDEDDIAMYT+K I+DPRTLN+T+Y+ PPKNILSQREVV+ WEKLIG
Sbjct: 181 VVLFGDGDIKAIYVDEDDIAMYTIKTIDDPRTLNKTVYITPPKNILSQREVVQIWEKLIG 240
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
K L+KSSIS E+FL+S++ Q YA QVGL HYYHVC+EGCLTNFEIG E VEA +LYPEIK
Sbjct: 241 KELEKSSISAEQFLSSLEGQAYAEQVGLIHYYHVCFEGCLTNFEIGEEEVEACELYPEIK 300
Query: 301 YTTVEEYLRRYL 312
YTTV +Y++RY+
Sbjct: 301 YTTVHDYMKRYV 312
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806198|ref|NP_001241204.1| uncharacterized protein LOC100780465 [Glycine max] gi|255642064|gb|ACU21298.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/312 (81%), Positives = 291/312 (93%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
MEKS+VLI+GGTGY+GKRLVKASLA GHET+VLHRPEIGVDIEKVQ+LLSFKEQGA+LVS
Sbjct: 1 MEKSRVLIVGGTGYIGKRLVKASLAQGHETFVLHRPEIGVDIEKVQLLLSFKEQGARLVS 60
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
GSFND++SLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGN+KRFLPSEFGTD
Sbjct: 61 GSFNDHKSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNIKRFLPSEFGTD 120
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
PA+MA+A+EPGRVTFDDKMVVRKAI++A IPFTY+SANCFAGYFLGGLCQPG I+P DS
Sbjct: 121 PARMAHALEPGRVTFDDKMVVRKAIQEAHIPFTYISANCFAGYFLGGLCQPGFIIPPMDS 180
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
V+L GDGN KAIYVDEDDIAMYT+K I+DPRT N+T+Y+RPP+NILSQREVV+ WEKLIG
Sbjct: 181 VILFGDGNVKAIYVDEDDIAMYTIKTIDDPRTRNKTVYIRPPENILSQREVVQIWEKLIG 240
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
K L KSSIS ++FL+SM+ Q Y QVG+ HYYHVC+EGCLTNFEIG EGVEA LYP+IK
Sbjct: 241 KELHKSSISAQQFLSSMEGQPYEQQVGMGHYYHVCFEGCLTNFEIGEEGVEACGLYPQIK 300
Query: 301 YTTVEEYLRRYL 312
YTTV+++++RY+
Sbjct: 301 YTTVQDFMKRYV 312
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|158263573|gb|ABW24501.1| (+)-pinoresinol-(+)-lariciresinol reductase [Linum usitatissimum] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/310 (82%), Positives = 286/310 (92%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
KSKVL+IGGTGYLGKRLV ASLA GHETYVL RPEIGVDIEK+Q+LLSFK+ GA LVSGS
Sbjct: 21 KSKVLVIGGTGYLGKRLVTASLAAGHETYVLQRPEIGVDIEKIQLLLSFKKAGASLVSGS 80
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 122
FNDY+SLV+AVKLVDVVICA+SGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA
Sbjct: 81 FNDYRSLVDAVKLVDVVICAVSGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 140
Query: 123 KMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV 182
M NAMEPGRVTFDDKMVVRKAIE+AGIPFTY+SANCFAGYFLGGLCQPG ILPS++ V
Sbjct: 141 TMENAMEPGRVTFDDKMVVRKAIEEAGIPFTYISANCFAGYFLGGLCQPGFILPSREQVT 200
Query: 183 LLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
LLGDGN KA+YVDEDDIA YT+K I+DPRTLN+T+Y++PPKN+LSQREVV WEK IGK
Sbjct: 201 LLGDGNQKAVYVDEDDIARYTIKMIDDPRTLNKTVYIKPPKNVLSQREVVGIWEKYIGKE 260
Query: 243 LQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYT 302
L+K+++S EEFLA MKEQ+YA QVGLTHYYHVCYEGCLTNFEIG+E EA++LYPE+ YT
Sbjct: 261 LKKTTLSVEEFLAMMKEQDYAEQVGLTHYYHVCYEGCLTNFEIGDEAGEATKLYPEVGYT 320
Query: 303 TVEEYLRRYL 312
TV EY++RY+
Sbjct: 321 TVVEYMKRYV 330
|
Source: Linum usitatissimum Species: Linum usitatissimum Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255557643|ref|XP_002519851.1| Isoflavone reductase, putative [Ricinus communis] gi|223540897|gb|EEF42455.1| Isoflavone reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/311 (81%), Positives = 283/311 (90%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+KSKVLI+GGTGYLGKRLVKASL+LGHETYV HR EIGVDI+KVQMLLSFK++G LV G
Sbjct: 3 KKSKVLIVGGTGYLGKRLVKASLSLGHETYVFHRAEIGVDIDKVQMLLSFKKKGCHLVQG 62
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SF+D++SLV+AVKLVDVVICAISGVHIRSHQILLQLKLV AIKEAGNVKRFLPSEFGTDP
Sbjct: 63 SFDDHKSLVDAVKLVDVVICAISGVHIRSHQILLQLKLVQAIKEAGNVKRFLPSEFGTDP 122
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
A+M NAMEPGRVTFDDKMV+R+AIE+A IP TYVSANCFAGYFLGGLCQPG I+PS+D V
Sbjct: 123 ARMENAMEPGRVTFDDKMVIRRAIEEAEIPHTYVSANCFAGYFLGGLCQPGHIIPSEDHV 182
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
LLGD N KAIYV+EDDIA+YT+K I+DPRTLN+T+Y+RP +NILSQREVVETWE+LIGK
Sbjct: 183 TLLGDANQKAIYVEEDDIAIYTLKTIDDPRTLNKTLYIRPSENILSQREVVETWERLIGK 242
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L KS+I K+ FL S+K Q+YA QVGLTHYYHVCYEGCL NFEIG EG EA+ LYPE+KY
Sbjct: 243 ELHKSTIPKDVFLESIKGQDYAEQVGLTHYYHVCYEGCLANFEIGEEGEEATGLYPEVKY 302
Query: 302 TTVEEYLRRYL 312
TTVEEYL RYL
Sbjct: 303 TTVEEYLTRYL 313
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449453441|ref|XP_004144466.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/311 (81%), Positives = 283/311 (90%), Gaps = 1/311 (0%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-IEKVQMLLSFKEQGAKLVSG 61
KSKVLIIGGTGYLGKRLVKASL LGHETYVL R EIGVD IEKV++LLSFK++GA L+ G
Sbjct: 9 KSKVLIIGGTGYLGKRLVKASLKLGHETYVLQRQEIGVDHIEKVELLLSFKKKGAHLICG 68
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SFND+ +LV A+KLVDVVI +ISGVHIRSH ILLQL LV AIKEAGNVKRFLPSEFGTDP
Sbjct: 69 SFNDHNTLVKAIKLVDVVISSISGVHIRSHHILLQLNLVRAIKEAGNVKRFLPSEFGTDP 128
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
A+M +AMEPGRVTFDDKMVVRKAIE+A IPFTY+SANCFAGYFLGGLCQPGSILPSKD V
Sbjct: 129 ARMEDAMEPGRVTFDDKMVVRKAIEEAKIPFTYISANCFAGYFLGGLCQPGSILPSKDHV 188
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+LLGDGN KAIYVDEDDIAMYTMK+I+D RTLN+T+Y+RPPKNILSQREVVE WEKLIGK
Sbjct: 189 LLLGDGNQKAIYVDEDDIAMYTMKSIDDCRTLNKTVYIRPPKNILSQREVVEIWEKLIGK 248
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L K+SIS +EFLA+MK+Q+YA QVGL+HYYHVCYEGCL NFEIG +G EA LYPE+ Y
Sbjct: 249 QLIKTSISSQEFLANMKDQDYAAQVGLSHYYHVCYEGCLANFEIGKDGEEACNLYPEVDY 308
Query: 302 TTVEEYLRRYL 312
TTVEEY++RYL
Sbjct: 309 TTVEEYMKRYL 319
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|158997688|gb|ABW86959.1| (+)-pinoresinol-(+)-lariciresinol reductase [Linum corymbulosum] | Back alignment and taxonomy information |
|---|
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/311 (79%), Positives = 285/311 (91%), Gaps = 1/311 (0%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
E SKVL+IGGTGYLGKRLVKASL GH+TYV+HRPEIGVDIEKVQ+LLSFK QGA LVS
Sbjct: 6 ESSKVLVIGGTGYLGKRLVKASLDAGHDTYVMHRPEIGVDIEKVQLLLSFKMQGAHLVSA 65
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SF+D++SLV+AV LVDVVICAISGVHIRSHQILLQLKLV AIKEAGNVKRFLPSEFGTDP
Sbjct: 66 SFDDHRSLVDAVSLVDVVICAISGVHIRSHQILLQLKLVQAIKEAGNVKRFLPSEFGTDP 125
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
A+M +AMEPGRVTFDDKMVVR+AIE+A IPFTYVSANCFAGYFLGGLCQPGSILPS+D V
Sbjct: 126 ARMGDAMEPGRVTFDDKMVVRRAIEEAAIPFTYVSANCFAGYFLGGLCQPGSILPSRDHV 185
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
LLGDGN K +YVDE+DIA YT+KAI+DPRTLN+T+Y++PPKNILSQR+VV WEK IGK
Sbjct: 186 TLLGDGNQKGVYVDENDIAAYTLKAIDDPRTLNKTLYIKPPKNILSQRQVVGIWEKHIGK 245
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L K+ +S+++FLA+MKEQ+YA QVGLTHYYHVCYEGCLTNFE+ + EAS+LYP+++Y
Sbjct: 246 QLHKTLLSEQDFLAAMKEQDYAEQVGLTHYYHVCYEGCLTNFEV-EQDQEASKLYPDVRY 304
Query: 302 TTVEEYLRRYL 312
TTVEEYL+RY+
Sbjct: 305 TTVEEYLKRYV 315
|
Source: Linum corymbulosum Species: Linum corymbulosum Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449500110|ref|XP_004161007.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/311 (81%), Positives = 283/311 (90%), Gaps = 1/311 (0%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-IEKVQMLLSFKEQGAKLVSG 61
KSKVLIIGGTGYLGKRLVKASL LGHETYVL R EIGVD IEKV++LLSFK++GA L+ G
Sbjct: 65 KSKVLIIGGTGYLGKRLVKASLKLGHETYVLQRQEIGVDHIEKVELLLSFKKKGAHLICG 124
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SFND+ +LV A+KLVDVVI +ISGVHIRSH ILLQL LV AIKEAGNVKRFLPSEFGTDP
Sbjct: 125 SFNDHNTLVKAIKLVDVVISSISGVHIRSHHILLQLNLVRAIKEAGNVKRFLPSEFGTDP 184
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
A+M +AMEPGRVTFDDKMVVRKAIE+A IPFTY+SANCFAGYFLGGLCQPGSILPSKD V
Sbjct: 185 ARMEDAMEPGRVTFDDKMVVRKAIEEAKIPFTYISANCFAGYFLGGLCQPGSILPSKDHV 244
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+LLGDGN KAIYVDEDDIAMYTMK+I+D RTLN+T+Y+RPPKNILSQREVVE WEKLIGK
Sbjct: 245 LLLGDGNQKAIYVDEDDIAMYTMKSIDDCRTLNKTVYIRPPKNILSQREVVEIWEKLIGK 304
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L K+SIS +EFLA+MK+Q+YA QVGL+HYYHVCYEGCL NFEIG +G EA LYPE+ Y
Sbjct: 305 QLIKTSISSQEFLANMKDQDYAAQVGLSHYYHVCYEGCLANFEIGKDGEEACNLYPEVDY 364
Query: 302 TTVEEYLRRYL 312
TTVEEY++RYL
Sbjct: 365 TTVEEYMKRYL 375
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|68146501|emb|CAH60857.1| pinoresinol-lariciresinol reductase [Linum album] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/309 (79%), Positives = 285/309 (92%), Gaps = 1/309 (0%)
Query: 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
SKVL+IGGTGYLGKRLVKASL GH+TYV+HRPEIGVDIEKVQ+LLSFK QGA LVS SF
Sbjct: 19 SKVLVIGGTGYLGKRLVKASLDSGHDTYVMHRPEIGVDIEKVQLLLSFKMQGAHLVSASF 78
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAK 123
+D +SLV+AVKLVDVVICAISGVHIRSHQILLQLKLV+AIKEAGNVKRF+PSEFGTDPA+
Sbjct: 79 DDQRSLVDAVKLVDVVICAISGVHIRSHQILLQLKLVEAIKEAGNVKRFVPSEFGTDPAR 138
Query: 124 MANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL 183
M NAMEPGR+TFDDKMVVR+AIE+AGIPFTYVSANCFAGYFLGGLCQPG ILPS+D V L
Sbjct: 139 MENAMEPGRITFDDKMVVRRAIEEAGIPFTYVSANCFAGYFLGGLCQPGYILPSRDHVTL 198
Query: 184 LGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243
LGDG+ K +YVDEDD A YT++AI+DPRTLN+T+Y++PPKN+LSQREVV WEK IGK L
Sbjct: 199 LGDGDKKGVYVDEDDTAAYTLRAIDDPRTLNKTIYVKPPKNVLSQREVVGIWEKYIGKEL 258
Query: 244 QKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTT 303
QK+ +S+++FLA+M+EQNYA QVGLTHYYHVCYEGCL+NFE+ +E EAS+LYP++ YTT
Sbjct: 259 QKTILSEQDFLATMREQNYAEQVGLTHYYHVCYEGCLSNFEVDDEQ-EASKLYPDVHYTT 317
Query: 304 VEEYLRRYL 312
VEEYL+RY+
Sbjct: 318 VEEYLKRYV 326
|
Source: Linum album Species: Linum album Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 312 | ||||||
| TAIR|locus:2031730 | 317 | PRR1 "pinoresinol reductase 1" | 0.993 | 0.977 | 0.614 | 4.6e-105 | |
| TAIR|locus:2119455 | 317 | PRR2 "pinoresinol reductase 2" | 0.993 | 0.977 | 0.598 | 1.2e-99 | |
| TAIR|locus:2025192 | 310 | AT1G75280 [Arabidopsis thalian | 0.961 | 0.967 | 0.490 | 7.7e-71 | |
| TAIR|locus:2025197 | 318 | AT1G75290 [Arabidopsis thalian | 0.964 | 0.946 | 0.483 | 7e-70 | |
| TAIR|locus:2136383 | 308 | AT4G39230 [Arabidopsis thalian | 0.974 | 0.987 | 0.459 | 9.2e-68 | |
| TAIR|locus:2016482 | 310 | AT1G19540 [Arabidopsis thalian | 0.971 | 0.977 | 0.458 | 1.2e-63 | |
| TAIR|locus:2025167 | 322 | AT1G75300 [Arabidopsis thalian | 0.964 | 0.934 | 0.446 | 8.8e-63 | |
| TAIR|locus:2139494 | 306 | AT4G34540 [Arabidopsis thalian | 0.948 | 0.967 | 0.402 | 1.6e-54 | |
| UNIPROTKB|G4MWE1 | 332 | MGG_08352 "Isoflavone reductas | 0.942 | 0.885 | 0.262 | 2.1e-13 | |
| ASPGD|ASPL0000072559 | 359 | AN8815 [Emericella nidulans (t | 0.733 | 0.637 | 0.262 | 1.5e-11 |
| TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 191/311 (61%), Positives = 251/311 (80%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EK++VL++G TGY+GKR+V+A LA GHETYVL RPEIG++IEKVQ+ LSFK+ GA++V G
Sbjct: 8 EKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEIGLEIEKVQLFLSFKKLGARIVEG 67
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SF+D+QSLV+AVKLVDVV+ A+SGVH RSH IL+QLKLV+AIKEAGNVKRFLPSEFG DP
Sbjct: 68 SFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFLPSEFGMDP 127
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
+M +A+ PGR TFD KM VR+AIE AGIP+TYV CFA YF G L Q ++LP K+ V
Sbjct: 128 PRMGHALPPGRETFDQKMEVRQAIEAAGIPYTYVVGACFAAYFAGNLSQMVTLLPPKEKV 187
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ GDGN K ++ DEDDIA YT K +NDPRTLN+T+ +RPP N+L+Q E+V+ WEKL GK
Sbjct: 188 NIYGDGNVKVVFADEDDIAKYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTGK 247
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L+K++I+ ++FLA++++ Q G+ H+YH+ YEGCLT+ E+G E EAS LYP++KY
Sbjct: 248 ELEKTNIAAQDFLANIEQMEIPHQAGIGHFYHIFYEGCLTDHEVG-EDEEASSLYPDVKY 306
Query: 302 TTVEEYLRRYL 312
+++YLR +L
Sbjct: 307 KRMDDYLRMFL 317
|
|
| TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 186/311 (59%), Positives = 244/311 (78%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EK++VL++GGTG LG+R+V A LA GHETYVL RPEIGVDIEKVQ+LLSFK GA LV G
Sbjct: 8 EKTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEIGVDIEKVQLLLSFKRLGAHLVEG 67
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SF+D+QSLV+AVK VDVV+ A+SGVH R+H I +QLKLV AIKEAGNVKRFLPSEFG DP
Sbjct: 68 SFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFLPSEFGMDP 127
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
++M +AM PG TFD KM +R AI+ AGI TY+ CFA YF G L Q G++ P K+ V
Sbjct: 128 SRMGHAMPPGSETFDQKMEIRNAIKAAGISHTYLVGACFAAYFGGNLSQMGTLFPPKNKV 187
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ GDGN K ++VDEDD+A YT K +NDPRTLN+T+Y+RP NIL+Q E+V+ WEKL K
Sbjct: 188 DIYGDGNVKVVFVDEDDMAKYTAKTLNDPRTLNKTVYVRPTDNILTQMELVQIWEKLTEK 247
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
L+K+ +S +FLA ++++ + Q GL H+YH+ YEGCLT+ E+G++ EA++LYP++KY
Sbjct: 248 ELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCLTDHEVGDDE-EATKLYPDVKY 306
Query: 302 TTVEEYLRRYL 312
++EYL+ ++
Sbjct: 307 KRMDEYLKIFV 317
|
|
| TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 152/310 (49%), Positives = 204/310 (65%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+L+IGGTGY+GK LV+AS GH T+ L R D K + + SFK+ G ++ G
Sbjct: 4 EKSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHG 63
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
ND++SLV A+K VDVVI + S QIL Q K++ AIKEAGNVKRFLPSEFG D
Sbjct: 64 DLNDHESLVKAIKQVDVVISTVG-----SMQILDQTKIISAIKEAGNVKRFLPSEFGVDV 118
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ--PGSILPSKD 179
+ +A+EP + F K+ +R+ IE GIP+TY CF GY+L L Q PG P +D
Sbjct: 119 DR-TSAVEPAKSAFAGKIQIRRTIEAEGIPYTYAVTGCFGGYYLPTLVQFEPGLTSPPRD 177
Query: 180 SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239
V +LGDGN KA+ E+DIA YT+KA++DPRTLN+ +Y++P N LS E+V WEK I
Sbjct: 178 KVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKI 237
Query: 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPE 298
GK+L+K+ + +E+ L S++E V L+ + V G TN I GVEAS+LYP+
Sbjct: 238 GKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGD-TNISIEPSFGVEASELYPD 296
Query: 299 IKYTTVEEYL 308
+KYT+V+EYL
Sbjct: 297 VKYTSVDEYL 306
|
|
| TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 150/310 (48%), Positives = 205/310 (66%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+L+IGGTG++GK +++AS+ GH T L R D K + + +FK+ G L+ G
Sbjct: 4 EKSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLHG 63
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
ND++SLV A+K DVVI + S QIL Q K++ AIKEAGNVKRFLPSEFG D
Sbjct: 64 DLNDHESLVKAIKQADVVISTVG-----SMQILDQTKIISAIKEAGNVKRFLPSEFGMDV 118
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ--PGSILPSKD 179
K ++A+EP + F K+ R+ IE GIP+TY+ N FAGY+L L Q PG P +D
Sbjct: 119 DK-SSAVEPAKSAFGRKLQTRRDIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRD 177
Query: 180 SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239
V + GDGN KA+ E+DIA YT+KA++DPRTLN+T+Y+ PP N LS E+V WEK I
Sbjct: 178 KVKIFGDGNVKAVINKEEDIAAYTIKAVDDPRTLNKTLYINPPNNTLSMNEIVTLWEKKI 237
Query: 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPE 298
GK+++K +S+E+ S++E V L+ + V +G TNF I G EAS+LYP+
Sbjct: 238 GKSVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQTNFTIEPSFGFEASELYPD 297
Query: 299 IKYTTVEEYL 308
IKYT+++EYL
Sbjct: 298 IKYTSIDEYL 307
|
|
| TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 143/311 (45%), Positives = 200/311 (64%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
KSK+L IGGTGY+GK +V+AS GH T VL R + + +FK G + + G
Sbjct: 4 KSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLLGD 63
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 122
+D+ SLVN++K DVVI + G + HQ K++ AIKEAGNVKRF PSEFG D
Sbjct: 64 LDDHTSLVNSIKQADVVISTV-GHSLLGHQY----KIISAIKEAGNVKRFFPSEFGNDVD 118
Query: 123 KMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV 182
++ +EP + + K +R+ IE GIP+TYVS N FAGYFL L QPG+ +D V+
Sbjct: 119 RVFT-VEPAKSAYATKAKIRRTIEAEGIPYTYVSCNFFAGYFLPTLAQPGATSAPRDKVI 177
Query: 183 LLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
+LGDGNPKA++ E+DI YT+ A++DPRTLN+ +Y+RPP N S ++V WE IGKT
Sbjct: 178 VLGDGNPKAVFNKEEDIGTYTINAVDDPRTLNKILYIRPPMNTYSFNDLVSLWENKIGKT 237
Query: 243 LQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPEIKY 301
L++ + +E+ L + E + V L+ + V +G T+FEI GVEAS+LYP++KY
Sbjct: 238 LERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGHTSFEIEPSFGVEASELYPDVKY 297
Query: 302 TTVEEYLRRYL 312
TTV+E L +Y+
Sbjct: 298 TTVDEILNQYV 308
|
|
| TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 144/314 (45%), Positives = 199/314 (63%)
Query: 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
SK+L+IG TG +GK LV+ S GH T+ L R D K Q++ FK+ G ++ GS
Sbjct: 3 SKILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSL 62
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAK 123
+D +SLV A+K VDVVI A+ +IL Q ++DAIKE+GNVKRFLPSEFG D +
Sbjct: 63 SDKESLVKAIKQVDVVISAVGRFQT---EILNQTNIIDAIKESGNVKRFLPSEFGNDVDR 119
Query: 124 MANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLG--GLCQPGSILPSKDSV 181
A+EP F K +R+AIE A IP+TYV + CFAG F+ G C P +D V
Sbjct: 120 TV-AIEPTLSEFITKAQIRRAIEAAKIPYTYVVSGCFAGLFVPCLGQCHLRLRSPPRDKV 178
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ GN KAI E+DI YT+KA++DPRTLN+ +Y+ PP I+SQ ++V WE+ IGK
Sbjct: 179 SIYDTGNGKAIVNTEEDIVAYTLKAVDDPRTLNKILYIHPPNYIVSQNDMVGLWEEKIGK 238
Query: 242 TLQKSSISKEEFLASMKEQNYAGQ--VGLTHYYHVCYEGCLTNFEIGNE-GVEASQLYPE 298
TL+K+ +S+EE L +++E VGL H + + T+F I GVEAS+LYPE
Sbjct: 239 TLEKTYVSEEELLKTIQESKPPMDFLVGLIHT--ILVKSDFTSFTIDPSFGVEASELYPE 296
Query: 299 IKYTTVEEYLRRYL 312
+KYT+V+E+L R++
Sbjct: 297 VKYTSVDEFLNRFI 310
|
|
| TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 146/327 (44%), Positives = 207/327 (63%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
EKSK+L+IGGTGY+G+ +V+ S G+ T+ L R D K + + SFK+ G ++ G
Sbjct: 4 EKSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHG 63
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
ND++SLV A+K VDVVI I H QI Q K++ AIKEAGNVKRFLP+EFG D
Sbjct: 64 DLNDHESLVKAIKQVDVVISTIG--H---KQIFDQTKIISAIKEAGNVKRFLPAEFGID- 117
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ--PGSI----- 174
+ +A+EP + F K+ +R+AIE GIP+TYV +NC AG++L L Q G I
Sbjct: 118 VERTSAVEPAKSLFAGKVQIRRAIEAEGIPYTYVVSNCSAGFYLRTLLQFESGLISHTRD 177
Query: 175 ---------LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNI 225
+P +D V +LGDGN K + E+D+A Y +KA++D RTLN+T+Y+ PP NI
Sbjct: 178 KAIIFGDKNVPPRDKVTILGDGNAKVVINKEEDVAAYMIKAVDDLRTLNKTLYISPPNNI 237
Query: 226 LSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEI 285
LS E+V WEK IGK+L+K+ IS+E+ L S++ + + H V +G T+F I
Sbjct: 238 LSMNEMVTLWEKKIGKSLEKTHISEEQILKSIQVPIDVFK-SINHAVFV--KGDQTSFTI 294
Query: 286 GNE-GVEASQLYPEIKYTTVEEYLRRY 311
G EAS LYP++KYT+++EYL ++
Sbjct: 295 EPWFGEEASVLYPDVKYTSIDEYLSQF 321
|
|
| TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 124/308 (40%), Positives = 178/308 (57%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+KS+VLIIG TG LG L + S+ GH T+ L R D L S + G L+ G
Sbjct: 6 KKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSD-----KLKSLSDAGVTLLKG 60
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
S D SL AV VDVVI AI H+ ++L+++ IK+AG++KRF+P+E+G +P
Sbjct: 61 SLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRV-----IKQAGSIKRFIPAEYGANP 115
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
K + + K +R IE GIP+TY+ F L L QPG P D V
Sbjct: 116 DK-TQVSDLDHDFYSKKSEIRHMIESEGIPYTYICCGLFMRVLLPSLVQPGLQSPPTDKV 174
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ GDGN KA++V++ D+A +T+K I+DPRTLN+T+YL PP NI S ++VE WE I K
Sbjct: 175 TVFGDGNVKAVFVNDVDVAAFTIKTIDDPRTLNKTLYLSPPGNICSMNDLVELWEGKIEK 234
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGN-EGVEASQLYPEIK 300
L+K+ ++ + L +KE Y + + Y V +G T F+I + GV ++LYP++K
Sbjct: 235 KLEKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDHTYFDIESCGGVNGTELYPDVK 294
Query: 301 YTTVEEYL 308
Y TV E+L
Sbjct: 295 YMTVSEFL 302
|
|
| UNIPROTKB|G4MWE1 MGG_08352 "Isoflavone reductase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 87/332 (26%), Positives = 149/332 (44%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M KV+IIG TG G+ ++K L + ++ ++K Q + +E+G K+
Sbjct: 8 MSSPKVVIIGATGAHGREIIKGLLE-SPTKFDINTISRKASVDKPQNA-ALREKGVKVFG 65
Query: 61 -GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119
+ LVN ++ D V+ I + Q LVDA KEAG VKR PS F
Sbjct: 66 VDMLGPREELVNVLRGADAVVAPIDFDNFEE-----QKALVDACKEAG-VKRLTPSNFA- 118
Query: 120 DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSA-----NCFAGYFLGGLCQPGSI 174
P A + R T K I++ +P+T + N G I
Sbjct: 119 -PVMPAYNVMGMRET---KEATINYIKEQRVPYTIIDVAWWYQNLPFKIPSGRTDYMSEI 174
Query: 175 LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVET 234
L D ++G G+ + + I + + + DPRT+N+ Y+ +L+ +VVET
Sbjct: 175 L--NDDARIIGTGDVPIAFSNLRSIGTHVARILADPRTINK--YVHIWDEVLTMHQVVET 230
Query: 235 WEKLIGKTLQK---SSISKEEFLASMK--------EQNYAGQVGLTHY-YHVCYEGCLTN 282
E++ G+ +++ + EE +A K +Q+ ++ +T Y Y + G T
Sbjct: 231 LEEVSGEKVERVYNTQKDMEETMAKCKAKLAADPKDQDAGMELTVTQYFYSMGVRGDSTP 290
Query: 283 FEIGNE-G-VEASQLYPEIKYTTVEEYLRRYL 312
E+ + G +++ +LYP+IK +T+ EY + L
Sbjct: 291 -EVADYLGYLDSRRLYPDIKASTLREYYKTVL 321
|
|
| ASPGD|ASPL0000072559 AN8815 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 180 (68.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 68/259 (26%), Positives = 120/259 (46%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLH---RPEIGVDIEKVQMLLSFKEQGAK 57
M ++ VL+IG G G + A L L H T+ +H RP +K +L+ +++G
Sbjct: 1 MSRTTVLLIGAAGETGGSIA-AGL-LEHPTFEIHALIRPR---SAQK-PAVLALQDKGVH 54
Query: 58 LVSGSF-NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116
+ + + L A+ +DVVI + + Q+ + +A K+AG VKRF+P
Sbjct: 55 IRKCDLKSSEEELEKALSDIDVVISCVGSAEQQD-----QIPIANAAKKAG-VKRFIPCG 108
Query: 117 FGTDPAKMANAMEPGRVTF--DDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSI 174
F T PG + + D+K V I+ +P+T + + L + G +
Sbjct: 109 FIT-------VAPPGGIMWLRDEKEAVYNHIKQLHLPYTIIDVGWWYQLAYPRL-ESGKL 160
Query: 175 --LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVV 232
+ + ++GDGN D DI Y + I D RTLN+ ++ +L+Q E+
Sbjct: 161 DYAMTTSNNEIVGDGNTPLALTDLRDIGRYVARIITDDRTLNKMVFAY--NTVLTQNEIF 218
Query: 233 ETWEKLIGKTLQKSSISKE 251
E++ G+ + ++ IS+E
Sbjct: 219 GLLEEISGEQITRNYISEE 237
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P52581 | IFRH_LUPAL | 1, ., 3, ., 1, ., - | 0.6666 | 1.0 | 1.0 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00023330001 | SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (312 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 312 | |||
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 2e-97 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 5e-72 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 4e-21 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-18 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 4e-17 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 9e-13 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 9e-12 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 2e-11 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 2e-09 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 5e-09 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 2e-07 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-07 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 6e-07 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 8e-07 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 9e-07 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 4e-06 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 5e-06 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 5e-05 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 9e-05 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 1e-04 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 3e-04 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-04 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 5e-04 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 5e-04 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 6e-04 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 0.001 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 0.001 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 0.002 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 0.003 | |
| cd08947 | 224 | cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio | 0.004 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 286 bits (735), Expect = 2e-97
Identities = 108/238 (45%), Positives = 136/238 (57%), Gaps = 12/238 (5%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+L+ G TGY G +V+ASL GH L R K ++ S K G +LV G +D
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDP------KSELAKSLKAAGVELVEGDLDD 54
Query: 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMA 125
++SLV A+K VDVV S +I KL DA KEAG VK F+PSEFG D +
Sbjct: 55 HESLVEALKGVDVVFSVTGFW--LSKEIEDGKKLADAAKEAG-VKHFIPSEFGNDV-DRS 110
Query: 126 NAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG 185
N +EP FD K V + I GIP+T+V A F G FL L PG + P +D V LLG
Sbjct: 111 NGVEPAVPHFDSKAEVERYIRALGIPYTFVYAGFFMGNFLSNLAPPGDLAPPRDKVTLLG 170
Query: 186 DGNPKAIYV-DEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
GNPKA+ + DE+DI Y +K ++DPR L Y+RPP NILS E+ E W K IGKT
Sbjct: 171 PGNPKAVPLDDEEDIGTYVIKILDDPRKLK-GKYIRPPGNILSGNEIAELWSKKIGKT 227
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 5e-72
Identities = 101/307 (32%), Positives = 151/307 (49%), Gaps = 29/307 (9%)
Query: 5 KVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
K+ I G TG LG +V A LA G VL RP E F+ G K+V +
Sbjct: 1 KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNE-------FQPSGVKVVPVDY 53
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAK 123
++SLV A+K VD VI A+ G I QLKL+DA AG VKRF+PSEFG D +
Sbjct: 54 ASHESLVAALKGVDAVISALGGAAIGD-----QLKLIDAAIAAG-VKRFIPSEFGVDYDR 107
Query: 124 MANAMEPGRVTFDDKMVVRKAIEDA--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
+ P FD+K VR+ + G+P+TYVS F Y L L G + + +
Sbjct: 108 IGAL--PLLDLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPL--FGVVDLANRTA 163
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAI-NDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
+ GDG K + +DI +A+ + RTLNR +++ ++++Q E++ E++ G
Sbjct: 164 TIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAG--DVVTQNELIALVERVTG 221
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
+ +++ +S+EE L + E AG + Y + + L E +A Y +K
Sbjct: 222 RKFERTYVSEEELLEELIEAAPAGLLN----YVIAFLHGLGIGGGDVEKSDAE--YLGLK 275
Query: 301 YTTVEEY 307
TVEE
Sbjct: 276 VETVEEL 282
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 4e-21
Identities = 66/255 (25%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 7 LIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY 66
L+ G TG LG +V+ LA L R + EK + +F G ++ G ++D
Sbjct: 2 LVTGATGKLGTAVVELLLAKVASVVALVR-----NPEKAK---AFAADGVEVRQGDYDDP 53
Query: 67 QSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL-PSEFGTDPAKMA 125
++L A + VD ++ IS + +I +DA K+AG VK + S G D
Sbjct: 54 ETLERAFEGVDRLL-LISPSDL-EDRIQQHKNFIDAAKQAG-VKHIVYLSASGADEDSPF 110
Query: 126 NAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG 185
T K +E +GIP+T + F L SIL G
Sbjct: 111 LLARDHGAT-------EKYLEASGIPYTILRPGWFMDNLLE---FLPSILEEGTIYGPAG 160
Query: 186 DGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQK 245
DG K +VD DIA A+ +P + L P+ LS E+ + +GK ++
Sbjct: 161 DG--KVAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPE-ALSYAELAAILSEALGKPVRY 217
Query: 246 SSISKEEFLASMKEQ 260
+S +E +
Sbjct: 218 VPVSPDEAARELLAA 232
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 2e-18
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 28/219 (12%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
KVL++G TG +G+ +V+ L G++ L R + + L GA++V G
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRDP-----SQAEKLE---AAGAEVVVGDLT 52
Query: 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILL-----QLKLVDAIKEAGNVKRF-LPSEFG 118
D +SL A++ +D VI A + + L+DA K+AG VKRF L S G
Sbjct: 53 DAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSSIG 111
Query: 119 TDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSK 178
D K ++ +E D K + +G+ +T V G
Sbjct: 112 AD--KPSHPLEALGPYLDAKRKAEDYLRASGLDYTIVRP---GGLTDD--------PAGT 158
Query: 179 DSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217
VVL GDG + D+A +A++ P + +T
Sbjct: 159 GRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGKTF 197
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 4e-17
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 15/163 (9%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+LI+G TG++G+ L + L GHE +L R + L ++ +V G D
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVR--------NTKRLSKEDQEPVAVVEGDLRD 52
Query: 66 YQSLVNAVKLVDVVICAI----SGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
SL +AV+ VDVVI + +++A KEAG VK F+
Sbjct: 53 LDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG-VKHFIFISSLGAY 111
Query: 122 AKMANAMEPGRVTF--DDKMVVRKAIEDAGIPFTYVSANCFAG 162
+ EP + K + +A +P+T V G
Sbjct: 112 GDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 9e-13
Identities = 72/254 (28%), Positives = 126/254 (49%), Gaps = 36/254 (14%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+L+IG TG LG+++V+ +L G++ L R ++ K L KE GA+LV G +
Sbjct: 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVR-----NLRKASFL---KEWGAELVYGDLSL 54
Query: 66 YQSLVNAVKLVDVVICAISG-----VHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
++L + K V +I A + + + +L L++A K A +KRF+ F +
Sbjct: 55 PETLPPSFKGVTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFI---FFS- 109
Query: 121 PAKMANAMEPGRVTFDD-KMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ---PGSILP 176
+ NA + + K + + ++ +GIP+T AG+F G + Q P IL
Sbjct: 110 ---ILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFR---LAGFFQGLISQYAIP--IL- 160
Query: 177 SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWE 236
K + + + + Y+D D A + +K+++ P T N+T L PK+ S E++ E
Sbjct: 161 EKQPIWITNE-STPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSS-EIISLCE 218
Query: 237 KLIGKTLQKSSISK 250
+L G QK+ IS+
Sbjct: 219 QLSG---QKAKISR 229
|
Length = 317 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 9e-12
Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
K+L+ G TG++G +V+ LA GHE R + E G ++V G
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVR-----NPEAAA----ALAGGVEVVLGDL 51
Query: 64 NDYQSLVNAVKLVDVVIC----AISGVHIRSHQILLQLKLVDAIKEAGN-VKRFLP-SEF 117
D +SLV K VD V+ R+ Q+ +V A + AG VK + S
Sbjct: 52 RDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTA---VVRAAEAAGAGVKHGVSLSVL 108
Query: 118 GTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPS 177
G D A + K V A+ +GIP+T + F G
Sbjct: 109 GADAASPSAL-------ARAKAAVEAALRSSGIPYTTL----RRAAFYLGAGAAFIEAAE 157
Query: 178 KDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEK 237
+ ++ G + + DD+A A++ P T RT L P+ L+ E+ +
Sbjct: 158 AAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPE-ALTLAELASGLDY 216
Query: 238 LIGK 241
IG+
Sbjct: 217 TIGR 220
|
Length = 275 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-11
Identities = 40/161 (24%), Positives = 54/161 (33%), Gaps = 30/161 (18%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+ +IG TG G+RLVK LA GH+ L R G V D
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-----------APGVTPVQKDLFD 49
Query: 66 YQSLVNAVKLVDVVICAISGV--HIRSHQILLQLKLVDAIKEAGNVKRF--------LPS 115
L A+ VD V+ A + L+DA AG V+R
Sbjct: 50 LADLAEALAGVDAVVDAFGARPDDSDGVK-----HLLDAAARAG-VRRIVVVSAAGLYRD 103
Query: 116 EFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156
E GT A P K + + +G+ +T V
Sbjct: 104 EPGTFRLDDAPLFPP---YARAKAAAEELLRASGLDWTIVR 141
|
Length = 182 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 58/277 (20%), Positives = 103/277 (37%), Gaps = 56/277 (20%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI-EKVQMLLSFKEQGAKLVSGSF 63
K+LIIGGT ++GK LV+ LA GH+ V +R D+ E V+ +
Sbjct: 2 KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHI--------VGDRNDR 53
Query: 64 NDYQSLVNAVKLVDVVI--CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL-------- 113
+ + L+ DVV+ A + + +DA K G VK+++
Sbjct: 54 DALEELLGGED-FDVVVDTIAYTPRQVER--------ALDAFK--GRVKQYIFISSASVY 102
Query: 114 --PSEFGTDPAKMANAMEPGR-VTFD---DKMVV-RKAIEDAGIPFTYVSANCFAGYFLG 166
P T+ + G +D K IE A P+T V Y G
Sbjct: 103 LKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVR----PPYIYG 158
Query: 167 GLCQPGSILP----------SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
PG +++ GDG+ ++ D+A + A +P+ +
Sbjct: 159 ----PGDYTGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKAIGGI 214
Query: 217 MYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEF 253
+ + + + E++E K +GK + + ++
Sbjct: 215 FNITGDEAV-TWDELLEACAKALGKEAEIVHVEEDFL 250
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 48/259 (18%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
V + G TG++G+ +V G + V +R E V L V
Sbjct: 2 VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDL----GQVLFVEFDLR 57
Query: 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQL------KLVDAIKEAGNVKRFL----- 113
D +S+ A++ DVVI + ++ + + +L A KEAG V+R +
Sbjct: 58 DDESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHISAL 116
Query: 114 ------PSEFGTDPAKMANAMEPGRVTFDDKMVVRKAI----EDAGIPFTYVSANCFAGY 163
PS++ A+ A+ R F + +VR ++ ED + + F +
Sbjct: 117 GADANSPSKYLRSKAEGEEAV---REAFPEATIVRPSVVFGREDRFLNR-FAKLLAFLPF 172
Query: 164 FLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPK 223
P +YV D+A +A+ DP T +T L PK
Sbjct: 173 PPLIGGGQTKFQP---------------VYV--GDVAEAIARALKDPETEGKTYELVGPK 215
Query: 224 NILSQREVVETWEKLIGKT 242
+ + E+VE +L G+
Sbjct: 216 -VYTLAELVELLRRLGGRK 233
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 45/243 (18%), Positives = 81/243 (33%), Gaps = 46/243 (18%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVL-----HRPEIGVDIEKVQMLLSFKEQGAKLVS 60
+L+ GGTG++G LV+ L G+E VL I + L+ + +L++
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLA 60
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
D +++ V +L L+L++A + AG VKRF+ + +
Sbjct: 61 EVQPDA--VIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVFA--SSS 115
Query: 121 PAKMANAMEPGRVTFDDKMV-----------------VRKAIEDAGIPFTYVSANCF--A 161
A P + V G+ V F
Sbjct: 116 EVYGDVADPP----ITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLR--AVILRLFNVY 169
Query: 162 GYFLGGLCQPGSILP-------SKDSVVLLGDGNPKAIYVDEDDI--AMYTM-KAINDPR 211
G ++P ++LLGDG + ++ DD+ A+ + +
Sbjct: 170 GPGNPDP-FVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGE 228
Query: 212 TLN 214
N
Sbjct: 229 IYN 231
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 4e-07
Identities = 60/273 (21%), Positives = 98/273 (35%), Gaps = 52/273 (19%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
++L+ GG G++G LV+ LA GH+ L R G+D G + V
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD---------PLLSGVEFVVLDLT 52
Query: 65 DYQSLVNAVKLV-DVVIC--AISGVHI--RSHQILLQ-------LKLVDAIKEAGNVKRF 112
D + K V D VI A S V S L L++A + AG VKRF
Sbjct: 53 DRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRF 111
Query: 113 L----PSEFGTDPAKMANAMEPGRVTFDDK---------MVVRKAIEDAGIPFTYVSANC 159
+ S DP + + G + ++R G+P +
Sbjct: 112 VFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVIL---- 167
Query: 160 FAGYFLGGLCQPGS-----------ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208
G +P +L + +V+ GDG+ +V DD+A + A+
Sbjct: 168 RPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALE 227
Query: 209 DPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+P + ++ RE+ E + +G
Sbjct: 228 NPD--GGVFNIGSGTAEITVRELAEAVAEAVGS 258
|
Length = 314 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 36/171 (21%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K+ IIG TG G +V+ +LA GHE L R D K+ K+V G
Sbjct: 1 KIAIIGATGRTGSAIVREALARGHEVTALVR-----DPAKLPAEHE----KLKVVQGDVL 51
Query: 65 DYQSLVNAVKLVDVVICAISG--------VHIRSHQILLQLKLVDAIKEAGNVKRFL--- 113
D + + A++ D VI A+ +H + +V A+K AG VKR +
Sbjct: 52 DLEDVKEALEGQDAVISALGTRNDLSPTTLHSEGTR-----NIVSAMKAAG-VKRLIVVG 105
Query: 114 --------PSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156
P + +D + K + ++G+ +T V
Sbjct: 106 GAGSLDDRPKVTLVLDTLLFPPALRR--VAEDHARMLKVLRESGLDWTAVR 154
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 8e-07
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
KVL+ G TG++G +V+ L G E VL RP D ++ L ++V G
Sbjct: 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP--TSDRRNLEGL------DVEIVEGDLR 53
Query: 65 DYQSLVNAVKLVDVVI 80
D SL AV +
Sbjct: 54 DPASLRKAVAGCRALF 69
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 9e-07
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+L+ G TG+LG LV+A LA G+ L R +L ++V G D
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSG-----SDAVLL---DGLPVEVVEGDLTD 52
Query: 66 YQSLVNAVKLVDVV 79
SL A+K D V
Sbjct: 53 AASLAAAMKGCDRV 66
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 25/199 (12%)
Query: 52 KEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQ-LKLVDAIKEAGNVK 110
G ++V G +D +SL A+K V V + Q +VDA K AG V+
Sbjct: 42 AAPGVEVVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAG-VQ 100
Query: 111 RFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCF----AGYFLG 166
F+ S D K+ A+ FD K V + I +G+P T + F
Sbjct: 101 HFVFSSVP-DVEKLTLAVP----HFDSKAEVEEYIRASGLPATILRPAFFMENFLTPPAP 155
Query: 167 GLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNI- 225
+ G++ ++VL D + K +D DI DP N +
Sbjct: 156 QKMEDGTL-----TLVLPLDPDTKLPMIDVADIGPAVAAIFKDPAKFNGKTI-----ELA 205
Query: 226 ---LSQREVVETWEKLIGK 241
L+ E+ + K++GK
Sbjct: 206 GDELTPEEIAAAFSKVLGK 224
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 5e-06
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 24/249 (9%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
VL++G TGY+GK +V+ + G+ + R + G+ + + + GA++V G
Sbjct: 62 TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVT 121
Query: 65 DYQSLVNAVK----LVDVVICAI---SGVHIRSHQILLQ--LKLVDAIKEAGNVKRFLPS 115
D SL + VDVV+ + +G S +I Q +DA +E G L S
Sbjct: 122 DADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLS 181
Query: 116 EFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYF--LGGLCQPGS 173
K + ++ F+ ++ D+ ++ V F F LGG +
Sbjct: 182 AICVQ--KPLLEFQRAKLKFEAELQAL----DSDFTYSIVRPTAF---FKSLGGQVE--- 229
Query: 174 ILPSKDSVVLLGDGNPKAIY-VDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVV 232
I+ V+ GDG A + E D+A + + D +N+ + + P L+ E
Sbjct: 230 IVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQG 289
Query: 233 ETWEKLIGK 241
E +++GK
Sbjct: 290 EMLFRILGK 298
|
Length = 390 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 5e-05
Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 36/266 (13%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+L+ G TG +G ++ L G L R E+ L +GA++V G +D
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVR-----SDERAAAL---AARGAEVVVGDLDD 52
Query: 66 YQSLVNAVKLVDVVICAIS---GVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDP 121
L A+ VD V R + A++EAG VKR + S G DP
Sbjct: 53 PAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAG-VKRVVNLSSVGADP 111
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPS--KD 179
+ R + + + + AG+P ++ F S PS K
Sbjct: 112 ESPSG---LIRGHWL----MEQVLNWAGLPVVHLRPAWFME-------NLLSQAPSIRKA 157
Query: 180 SVV---LLGDGNPKAIYVDEDDIAMYTMKAINDP-RTLNRTMYLRPPKNILSQREVVETW 235
V+ GDG + + DDIA K + DP +R L P++ L+ E+
Sbjct: 158 GVLALPFPGDG--RLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPED-LTMNEIAAAL 214
Query: 236 EKLIGKTLQKSSISKEEFLASMKEQN 261
+++G+ ++ + +E++ A++
Sbjct: 215 SRVLGRPVRYVPVPEEQWEATLLSLG 240
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
KV + G TG++G +V+ +A GHE L R + G K+ + GA++ G
Sbjct: 2 KVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGA--AKL------EAAGAQVHRGDLE 53
Query: 65 DYQSLVNAVKLVDVVI 80
D L A D VI
Sbjct: 54 DLDILRKAAAEADAVI 69
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 8/85 (9%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
VL+ G G++G L + L GHE L +I +L + +SG
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRAL---DIYNSFNSWGLLDNAVHDRFHFISGDVR 57
Query: 65 DYQSLVNAVKLVDVV-----ICAIS 84
D + VK DVV + AI
Sbjct: 58 DASEVEYLVKKCDVVFHLAALIAIP 82
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 31/161 (19%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
KVLI+G G + + L + L + LL K +V G
Sbjct: 2 KVLILGANGEIAREATTMLLENSNVELTLF-------LRNAHRLLHLKSARVTVVEGDAL 54
Query: 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRF-----------L 113
+ L A++ DVV + G + +V A+K G VKR +
Sbjct: 55 NSDDLKAAMRGQDVVYANLGGTDLDQ----QAENVVQAMKAVG-VKRLIWTTSLGIYDEV 109
Query: 114 PSEFGT-DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFT 153
P +FG + + N + P R + IE++ + +T
Sbjct: 110 PGKFGEWNKEFIGNYLAPYRKSAA-------VIENSDLDYT 143
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
V + GGTG+LG+ LVK L G + VL R E + + + +++ G
Sbjct: 1 VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEG 56
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHR 35
K++I GGTG++G+ L + A GHE VL R
Sbjct: 1 KIVITGGTGFIGRALTRRLTAAGHEVVVLSR 31
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
+VL+ GG G++G LV+ L GHE VL G K + L K K + G
Sbjct: 1 RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTG----KKENLPEVKPN-VKFIEGDIR 55
Query: 65 DYQSLVNAVKLVDVVI--CAISGVH------IRSHQ--ILLQLKLVDAIKEAGNVKRF 112
D + + A + VD V A + V I+ H+ +L L L++A ++AG VKRF
Sbjct: 56 DDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKRF 112
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 17/116 (14%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-DIEKVQMLLSFKEQGAKLVSGSFN 64
L++GG+G+LG+ LV+ L G P + V DI L + +G
Sbjct: 2 CLVVGGSGFLGRHLVEQLLRRG-------NPTVHVFDIRPTFELDPSSSGRVQFHTGDLT 54
Query: 65 DYQSLVNAVKL--VDVVICAISGVHIRSHQILLQL------KLVDAIKEAGNVKRF 112
D Q L A +VV S H + + ++ +++A ++ G VK+
Sbjct: 55 DPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCG-VKKL 109
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 21/126 (16%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+VLI+GG G++G LV A L G + V G + G +
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIP----------PYELPLGGVDYIKGDY 50
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQ----------ILLQLKLVDAIKEAGNVKRFL 113
+ L +A+ +D VI S + + + ++L++A AG K
Sbjct: 51 ENRADLESALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIF 110
Query: 114 PSEFGT 119
S GT
Sbjct: 111 ASSGGT 116
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38
+L+ GG G++G LV+ L GHE V+ R ++
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDV 33
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.002
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
K+ IIG +G G R++K +L GHE T ++ K+ QG ++
Sbjct: 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNA------SKLAAR-----QGVTILQKDI 50
Query: 64 NDYQSLVNAVKLVDVVICAISG-------VHIRSHQILLQLKLVDAIKEAGNVKRFL 113
D SL + + D VI A +H +S + L++ A+K AG V R L
Sbjct: 51 FDLTSLASDLAGHDAVISAFGAGASDNDELHSKSIEALIE-----ALKGAG-VPRLL 101
|
Length = 211 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
+ LI G TG G L + L G+E + + R + +++ L K++ L G
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDR-ITLHYGDLT 59
Query: 65 DYQSLVNAVKLVD 77
D SL A++ V
Sbjct: 60 DSSSLRRAIEKVR 72
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.004
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 17/161 (10%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
+ + G TG G +++ LA G V + V+ + +QG ++ G +N
Sbjct: 1 IAVTGATGQQGGSVIRHLLAKGA------SQVRAV-VRNVEKAATLADQGVEVRQGDYNQ 53
Query: 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLK-LVDAIKEAGNVKRFLPSEFGTDPAKM 124
+ L A + I+G H + + Q K + DA + AG VK + G A+
Sbjct: 54 PELLQKAFAGASKLFI-ITGPHYDNTLEIKQGKNVADAARRAG-VKHIYST--GYAFAE- 108
Query: 125 ANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFL 165
E K+ V AI GIP+T++ + F+
Sbjct: 109 ----ESAIPLAHVKLAVEYAIRTTGIPYTFLRNGLYTENFV 145
|
Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 312 | |||
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.98 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.97 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.96 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.96 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.96 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.95 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.94 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.94 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.94 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.94 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.94 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.94 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.94 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.93 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.93 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.93 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.93 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.93 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.93 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.92 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.92 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.91 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.91 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.89 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.89 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.88 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.88 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.87 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.87 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.86 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.85 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.85 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.82 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.8 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.8 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.8 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.79 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.79 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.79 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.78 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.76 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.76 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.74 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.72 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.72 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.71 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.71 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.71 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.71 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.7 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.7 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.69 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.69 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.69 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.69 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.68 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.68 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.68 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.67 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.66 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.66 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.66 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.66 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.66 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.65 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.65 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.65 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.64 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.64 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.63 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.62 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.62 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.62 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.61 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.61 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.61 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.61 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.6 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.6 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.6 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.6 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.59 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.59 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.59 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.58 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.57 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.57 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.57 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.56 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.56 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.56 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.55 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.55 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.55 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.55 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.54 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.53 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.53 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.53 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.53 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.53 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.52 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.52 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.52 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.52 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.51 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.49 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.48 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.47 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.47 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.47 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.44 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.44 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.43 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.43 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.42 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.41 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.39 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.38 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.38 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.37 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.37 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.36 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.35 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.32 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.32 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.3 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.28 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.28 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.28 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.23 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.23 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.22 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.22 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.17 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.16 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.16 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.14 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.13 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.08 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.07 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.07 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 99.01 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.98 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.97 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.96 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.93 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.92 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.91 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.85 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.85 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.81 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.8 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.77 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.76 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.7 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.69 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.68 | |
| PLN00106 | 323 | malate dehydrogenase | 98.65 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.61 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.6 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.52 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.51 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.49 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.49 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.45 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.42 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.32 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.3 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.28 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.28 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.26 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.26 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.24 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.24 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.23 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.23 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.22 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 98.21 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.21 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 98.19 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.15 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.13 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.12 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.11 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.11 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.09 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.09 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.06 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.96 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.96 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.94 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.93 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.93 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.92 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.91 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 97.91 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.9 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.89 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.89 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.87 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.85 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.82 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.8 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.75 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.74 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.72 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 97.69 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.68 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.66 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.66 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.65 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.64 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.64 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.63 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.59 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.58 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 97.58 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 97.58 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.57 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 97.52 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.52 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.49 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.48 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.48 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.46 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.46 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.46 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.43 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.43 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.41 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.41 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.4 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.39 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.39 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.38 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.38 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.37 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.37 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.36 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.36 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.35 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.35 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.34 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.33 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.33 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 97.32 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.32 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.32 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.31 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.3 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.29 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 97.28 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.28 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.27 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.27 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.26 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.25 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.24 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.24 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.22 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.22 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.22 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 97.22 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.22 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.21 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.2 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.19 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.17 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.16 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.15 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.15 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.13 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 97.12 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 97.11 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.1 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.1 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.1 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.09 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.09 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 97.09 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 97.08 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.08 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.07 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 97.07 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 97.07 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.06 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 97.06 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.06 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.05 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.05 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.05 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.05 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.05 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.02 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 97.02 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 97.01 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.01 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.01 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.0 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.96 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.95 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.94 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.94 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.94 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.93 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.93 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.93 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.93 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.93 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.92 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.92 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.91 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.91 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.9 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.9 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.9 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.9 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 96.89 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.89 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.88 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.87 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.85 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.85 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.85 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.85 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.85 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.84 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.84 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.83 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.82 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.82 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.81 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 96.81 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.81 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.79 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.78 | |
| PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.78 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.78 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.76 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.76 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.74 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.74 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.73 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.72 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.71 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.71 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 96.7 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.69 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 96.68 | |
| PF10100 | 429 | DUF2338: Uncharacterized protein conserved in bact | 96.68 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 96.68 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.68 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 96.68 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.67 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.64 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 96.64 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.63 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.63 |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=261.06 Aligned_cols=270 Identities=17% Similarity=0.238 Sum_probs=207.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh------cc-CC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV------KL-VD 77 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~------~~-~d 77 (312)
+|+||||||++|++++++|+++|++|++++|+.+.. ...+++.+.+|+.|++++.+++ ++ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~-----------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS-----------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc-----------cCCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 589999999999999999999999999999984422 1357888899999999999999 57 99
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHh-CCCeEEE
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDA-GIPFTYV 155 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~-~~~~~i~ 155 (312)
.||++++.... ......+++++|+++| ++|||+ |+.+..... ..+...++++++. +++++++
T Consensus 70 ~v~~~~~~~~~---~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~------------~~~~~~~~~l~~~~gi~~til 133 (285)
T TIGR03649 70 AVYLVAPPIPD---LAPPMIKFIDFARSKG-VRRFVLLSASIIEKGG------------PAMGQVHAHLDSLGGVEYTVL 133 (285)
T ss_pred EEEEeCCCCCC---hhHHHHHHHHHHHHcC-CCEEEEeeccccCCCC------------chHHHHHHHHHhccCCCEEEE
Confidence 99999875432 2567889999999999 999998 554432111 1344567788875 9999999
Q ss_pred ecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHH
Q 021470 156 SANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETW 235 (312)
Q Consensus 156 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~ 235 (312)
||++|++++...+.... ......+ +.+.++.++++|+++|+|++++.++.++...++.|+++|+. .+|++|+++.+
T Consensus 134 Rp~~f~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~-~~s~~eia~~l 209 (285)
T TIGR03649 134 RPTWFMENFSEEFHVEA--IRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPE-LLTYDDVAEIL 209 (285)
T ss_pred eccHHhhhhcccccccc--cccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCc-cCCHHHHHHHH
Confidence 99999988743321111 1222333 34567888999999999999999999887677889998765 99999999999
Q ss_pred HHHhCCcceeecCCHHHHHHHHHhcCcccccc--ceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 236 EKLIGKTLQKSSISKEEFLASMKEQNYAGQVG--LTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 236 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
++++|+++++..+|.+++.+.+...|+|.... +..++.....|.. ... +.+. +.+.|.+|+||+||++++
T Consensus 210 ~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~---~~~--~~~~-~~~~G~~p~~~~~~~~~~ 281 (285)
T TIGR03649 210 SRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAE---VRL--NDVV-KAVTGSKPRGFRDFAESN 281 (285)
T ss_pred HHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcc---ccc--cchH-HHHhCcCCccHHHHHHHh
Confidence 99999999999999999999999999887654 3333333344442 111 1233 333589999999999975
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=261.01 Aligned_cols=229 Identities=26% Similarity=0.356 Sum_probs=184.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|||||||+|++++++|+++||+|++++|+ +++. ..+...+++++.+|+.|++++.++++++|+|||++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~-----~~~~---~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~ 72 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRN-----LRKA---SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAS 72 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-----hHHh---hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECC
Confidence 489999999999999999999999999999998 3333 22334589999999999999999999999999998
Q ss_pred CCCcc-----ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEec
Q 021470 84 SGVHI-----RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSA 157 (312)
Q Consensus 84 ~~~~~-----~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~ 157 (312)
+.... ...|+.++.+++++|+++| +++||+ |+++.... +..++..+|.++|+++++++++++++||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~-------~~~~~~~~K~~~e~~l~~~~l~~tilRp 144 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY-------PYIPLMKLKSDIEQKLKKSGIPYTIFRL 144 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc-------CCChHHHHHHHHHHHHHHcCCCeEEEee
Confidence 64321 2357888999999999999 999997 66654221 1245677999999999999999999999
Q ss_pred ccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHH
Q 021470 158 NCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEK 237 (312)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~ 237 (312)
+.+++++...+.... ..+.+..+ ..++..+++++++|+|++++.++.++...+++|+++|+. .+|++|+++.+++
T Consensus 145 ~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~-~~s~~el~~~~~~ 219 (317)
T CHL00194 145 AGFFQGLISQYAIPI---LEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPK-SWNSSEIISLCEQ 219 (317)
T ss_pred cHHhhhhhhhhhhhh---ccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCC-ccCHHHHHHHHHH
Confidence 988876543322111 22333433 445677899999999999999998877678899998664 9999999999999
Q ss_pred HhCCcceeecCCHHHH
Q 021470 238 LIGKTLQKSSISKEEF 253 (312)
Q Consensus 238 ~~g~~~~~~~~~~~~~ 253 (312)
.+|++..+..+|...+
T Consensus 220 ~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 220 LSGQKAKISRVPLFLL 235 (317)
T ss_pred HhCCCCeEEeCCHHHH
Confidence 9999988888887644
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-35 Score=239.06 Aligned_cols=230 Identities=32% Similarity=0.495 Sum_probs=185.7
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
|+|+||||.+|++++++|++.+++|++++|+.+ + ...+.++..+++++.+|+.|.+++.++|+|+|+||++.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-----~-~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-----S-DRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-----H-HHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-----h-hhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 799999999999999999999999999999842 2 1235566789999999999999999999999999999986
Q ss_pred CccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccccccc
Q 021470 86 VHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFL 165 (312)
Q Consensus 86 ~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~~~~~ 165 (312)
.. ........++++||+++| |++||+|+++..... .....|..+.+..|..+|+++++.+++|+++|||+|+++++
T Consensus 75 ~~--~~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~-~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~ 150 (233)
T PF05368_consen 75 SH--PSELEQQKNLIDAAKAAG-VKHFVPSSFGADYDE-SSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLL 150 (233)
T ss_dssp SC--CCHHHHHHHHHHHHHHHT--SEEEESEESSGTTT-TTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHH
T ss_pred ch--hhhhhhhhhHHHhhhccc-cceEEEEEecccccc-cccccccchhhhhhhhhhhhhhhccccceeccccchhhhhh
Confidence 54 344888999999999999 999999998876543 32334446677899999999999999999999999999987
Q ss_pred ccCCCCCccCCCCCeeEEeCCCCcceeee-eHHHHHHHHHHHhcCCccC--CceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 166 GGLCQPGSILPSKDSVVLLGDGNPKAIYV-DEDDIAMYTMKAINDPRTL--NRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~D~a~~~~~~l~~~~~~--~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
..+............+.+.++++....++ +.+|+|++++.++.+|... ++.+++. ++.+|++|+++.+++.+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~--~~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 151 PPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLA--GETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp TTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEG--GGEEEHHHHHHHHHHHHTSE
T ss_pred hhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeC--CCCCCHHHHHHHHHHHHCCc
Confidence 65444221112233677888888777775 9999999999999998655 5666664 46899999999999999999
Q ss_pred ceeec
Q 021470 243 LQKSS 247 (312)
Q Consensus 243 ~~~~~ 247 (312)
++|++
T Consensus 229 v~y~~ 233 (233)
T PF05368_consen 229 VKYVQ 233 (233)
T ss_dssp EEEEE
T ss_pred cEEeC
Confidence 98864
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-33 Score=220.31 Aligned_cols=238 Identities=24% Similarity=0.335 Sum_probs=183.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+||||||+|+||+|.+.+|++.|++|++++.-..+. .+. +.....+++++|+.|.+.+.+.|+ .+|+|+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~-~~~------v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViH 73 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH-KIA------LLKLQFKFYEGDLLDRALLTAVFEENKIDAVVH 73 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC-HHH------hhhccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence 5899999999999999999999999999998876665 222 212227899999999999999998 7999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCC----CCCCcccc---cccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSE----FGTDPAKM---ANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~----~g~~~~~~---~~~~~p~~~~~~~K~~~e~~ 144 (312)
+|+..... ..|+.++.+|+++|++++ |++||||| ||.+...+ +.|..|.+||+.+|.++|++
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~i 152 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEI 152 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHH
Confidence 99986642 378999999999999999 99999964 66554422 66778889999999999999
Q ss_pred HHH----hCCCeEEEecccccccc----c-------ccCCCCCcc--CCCCCeeEEeC------CCCcceeeeeHHHHHH
Q 021470 145 IED----AGIPFTYVSANCFAGYF----L-------GGLCQPGSI--LPSKDSVVLLG------DGNPKAIYVDEDDIAM 201 (312)
Q Consensus 145 ~~~----~~~~~~i~r~~~~~~~~----~-------~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~v~~~D~a~ 201 (312)
++. .+++++++|--...|.- + ..++..... .-+...+.++| +|...+++||+.|+|+
T Consensus 153 L~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~ 232 (329)
T COG1087 153 LRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLAD 232 (329)
T ss_pred HHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHH
Confidence 985 57999999933322211 1 111111000 02234466766 5678899999999999
Q ss_pred HHHHHhcCCccCC--ceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 202 YTMKAINDPRTLN--RTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 202 ~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
+.+.+++.-...+ .+||+ |.+.-+|..|+++.+.++.|++++++..+.
T Consensus 233 aH~~Al~~L~~~g~~~~~NL-G~G~G~SV~evi~a~~~vtg~~ip~~~~~R 282 (329)
T COG1087 233 AHVLALKYLKEGGSNNIFNL-GSGNGFSVLEVIEAAKKVTGRDIPVEIAPR 282 (329)
T ss_pred HHHHHHHHHHhCCceeEEEc-cCCCceeHHHHHHHHHHHhCCcCceeeCCC
Confidence 9999986432222 46666 688899999999999999999998877764
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-32 Score=234.81 Aligned_cols=238 Identities=21% Similarity=0.291 Sum_probs=185.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChH-HHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIE-KVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d 77 (312)
+++|+||||||+||++++++|+++|++|++++|+....... ...... ....+++++++|++|++++.++++ ++|
T Consensus 60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTK-KELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHh-hhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 57999999999999999999999999999999984322000 000000 113579999999999999999988 599
Q ss_pred EEEEcCCCCc-----cccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH--hC
Q 021470 78 VVICAISGVH-----IRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED--AG 149 (312)
Q Consensus 78 ~v~~~~~~~~-----~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~--~~ 149 (312)
+||||++... ....|...+.+++++|++.+ +++||+ |+.+... |...+..+|...|+.++. .+
T Consensus 139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~--------p~~~~~~sK~~~E~~l~~~~~g 209 (390)
T PLN02657 139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK--------PLLEFQRAKLKFEAELQALDSD 209 (390)
T ss_pred EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC--------cchHHHHHHHHHHHHHHhccCC
Confidence 9999987532 12367888999999999999 999887 6554321 234566799999999986 88
Q ss_pred CCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce-eeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCH
Q 021470 150 IPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA-IYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQ 228 (312)
Q Consensus 150 ~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~ 228 (312)
++++++||+.|++++...+ .. ...++++.++++++..+ ++||++|+|++++.++.++...+++|++.|+++.+|+
T Consensus 210 l~~tIlRp~~~~~~~~~~~-~~---~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~ 285 (390)
T PLN02657 210 FTYSIVRPTAFFKSLGGQV-EI---VKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTP 285 (390)
T ss_pred CCEEEEccHHHhcccHHHH-Hh---hccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCH
Confidence 9999999999987543211 11 13456666778877544 6799999999999999877667889999876668999
Q ss_pred HHHHHHHHHHhCCcceeecCCHHHHH
Q 021470 229 REVVETWEKLIGKTLQKSSISKEEFL 254 (312)
Q Consensus 229 ~e~~~~~~~~~g~~~~~~~~~~~~~~ 254 (312)
+|+++++.+.+|+++++..+|...+.
T Consensus 286 ~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 286 LEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred HHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 99999999999999999989887543
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=233.30 Aligned_cols=237 Identities=16% Similarity=0.120 Sum_probs=177.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhh---ccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSF---KEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l---~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
.+|+|+|||||||||++|++.|+++|++|++++|..... ..... ..... ...+++++.+|+.|.+.+.++++++|
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGY-QHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 468999999999999999999999999999999864332 11111 00100 11357889999999999999999999
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
+|||+|+.... ...|+.++.+++++|++.+ +++||+ |+ ||.....+ +.+..|..+|..+|..
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV 171 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence 99999986431 1278899999999999998 999987 43 65322211 3344565667779999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccC------CCC-CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGL------CQP-GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|.+++. .+++++++||+.++|+..... ... ......++++.+++++.+.++++|++|+|++++.++..
T Consensus 172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 251 (348)
T PRK15181 172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATT 251 (348)
T ss_pred HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 9988753 589999999999998753211 000 00123466778889999999999999999999887754
Q ss_pred Cc--cCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 210 PR--TLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 210 ~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+. ..+++||+. +++.+|++|+++.+.+.++.
T Consensus 252 ~~~~~~~~~yni~-~g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 252 NDLASKNKVYNVA-VGDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred ccccCCCCEEEec-CCCcEeHHHHHHHHHHHhCc
Confidence 32 246788886 55699999999999999874
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=212.34 Aligned_cols=281 Identities=17% Similarity=0.199 Sum_probs=206.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
|++|||||.||||+++++.++++. .+|+.++.-+-..+.+.. ......++..++++|+.|.+.+.++++ .+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l--~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL--ADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH--HhhhcCCCceEEeccccCHHHHHHHHHhcCCCeE
Confidence 589999999999999999999886 567888776554433332 122345699999999999999999998 69999
Q ss_pred EEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCccc-----ccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAK-----MANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~-----~~~~~~p~~~~~~~K~~ 140 (312)
+|+|+-++.. ..|+.++.+|++|+++.....+|++ | .||.-... ..+|..|.+||..+|+.
T Consensus 79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAa 158 (340)
T COG1088 79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAA 158 (340)
T ss_pred EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhh
Confidence 9999976532 3899999999999999882236765 4 36643221 26788998889889998
Q ss_pred HHHHHH----HhCCCeEEEecccccccc-ccc-CCCCC-ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 141 VRKAIE----DAGIPFTYVSANCFAGYF-LGG-LCQPG-SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 141 ~e~~~~----~~~~~~~i~r~~~~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
...+++ .+|++++|.|++.-+|+. .+. ++... ...+.+.+++++|+|.+.++|++++|-++++..++...+ .
T Consensus 159 sD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~-~ 237 (340)
T COG1088 159 SDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK-I 237 (340)
T ss_pred HHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc-C
Confidence 776665 479999999988777753 221 11111 122678899999999999999999999999999999987 4
Q ss_pred CceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCccccc
Q 021470 214 NRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEAS 293 (312)
Q Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 293 (312)
|++|++.|. +..+-.|+++.+++.+|+..+- ..+++..... ..|.-.+|.++.. ++.
T Consensus 238 GE~YNIgg~-~E~~Nlevv~~i~~~l~~~~~~----~~~li~~V~D----------------RpGHD~RYaid~~--Ki~ 294 (340)
T COG1088 238 GETYNIGGG-NERTNLEVVKTICELLGKDKPD----YRDLITFVED----------------RPGHDRRYAIDAS--KIK 294 (340)
T ss_pred CceEEeCCC-ccchHHHHHHHHHHHhCccccc----hhhheEeccC----------------CCCCccceeechH--HHh
Confidence 889999765 4889999999999999987551 1111111111 1344445666544 433
Q ss_pred ccCCCC-cccCHHHHHHhh
Q 021470 294 QLYPEI-KYTTVEEYLRRY 311 (312)
Q Consensus 294 ~~~~~~-~~~~~~e~~~~~ 311 (312)
+.+ +. +.++||+.|++.
T Consensus 295 ~eL-gW~P~~~fe~GlrkT 312 (340)
T COG1088 295 REL-GWRPQETFETGLRKT 312 (340)
T ss_pred hhc-CCCcCCCHHHHHHHH
Confidence 333 32 446999999875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.98 E-value=8e-31 Score=218.49 Aligned_cols=235 Identities=22% Similarity=0.259 Sum_probs=173.7
Q ss_pred EEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 7 LIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 7 lI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||||+||+|++|+++|+++| ++|+++++...... . ..+...+. +++++|++|++++.++++++|+|||+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~---~---~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A 74 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF---L---KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTA 74 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc---c---hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence 699999999999999999999 79999998754321 1 11223333 499999999999999999999999999
Q ss_pred CCCccc---------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcc-----cc-----cc--cCCCCCchhhhHHHH
Q 021470 84 SGVHIR---------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPA-----KM-----AN--AMEPGRVTFDDKMVV 141 (312)
Q Consensus 84 ~~~~~~---------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~-----~~-----~~--~~~p~~~~~~~K~~~ 141 (312)
+..... ..|+.+++|++++|++++ |+++|+ ||.+.... .. .. +..+...|..+|..+
T Consensus 75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~A 153 (280)
T PF01073_consen 75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALA 153 (280)
T ss_pred ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHH
Confidence 865421 279999999999999999 999998 54332111 00 11 122344566699999
Q ss_pred HHHHHHh-C--------CCeEEEecccccccccccCCCCCccC-CCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc---
Q 021470 142 RKAIEDA-G--------IPFTYVSANCFAGYFLGGLCQPGSIL-PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN--- 208 (312)
Q Consensus 142 e~~~~~~-~--------~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~--- 208 (312)
|+++.+. + +..++|||+.++|+.-..+....... ..+......++++...+++|++|+|.+++.+..
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~ 233 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL 233 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence 9998763 2 67889999999997544333221111 223355667778888999999999999987753
Q ss_pred C----CccCCceEEecCCCCcCC-HHHHHHHHHHHhCCccee-ecCC
Q 021470 209 D----PRTLNRTMYLRPPKNILS-QREVVETWEKLIGKTLQK-SSIS 249 (312)
Q Consensus 209 ~----~~~~~~~~~~~~~~~~~s-~~e~~~~~~~~~g~~~~~-~~~~ 249 (312)
+ ....|+.|+++ ++++.+ +.|+...+.+.+|.+.+. .++|
T Consensus 234 ~~~~~~~~~G~~y~it-d~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 234 EPGKPERVAGQAYFIT-DGEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred cccccccCCCcEEEEE-CCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 2 23567888987 456888 999999999999988664 5554
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-30 Score=212.52 Aligned_cols=232 Identities=19% Similarity=0.181 Sum_probs=169.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+++|+|||||||||++|++.||++||.|++.+|++.+ +++.+.+..++ ..+..++.+|+.|++++.++++|||+||
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~--~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED--EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch--hhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 4799999999999999999999999999999999665 34444556665 3458999999999999999999999999
Q ss_pred EcCCCCccc---------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCccc-----c-----cccCCC-------CCc
Q 021470 81 CAISGVHIR---------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAK-----M-----ANAMEP-------GRV 133 (312)
Q Consensus 81 ~~~~~~~~~---------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~-----~-----~~~~~p-------~~~ 133 (312)
|+|.+..+. +..+.+++|++++|++..+|+|+|+ ||....... . ++...+ ...
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~ 163 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW 163 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence 999987642 2568899999999999988999997 543221110 0 111111 112
Q ss_pred hhhhHHHHHHHH----HHhCCCeEEEecccccccccccCCCCCc----cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAI----EDAGIPFTYVSANCFAGYFLGGLCQPGS----ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~----~~~~~~~~i~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..+|+.. .+.+++.+.+.|+++.|+.+........ ....+. ...+. +....+||++|+|++.+.
T Consensus 164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~-~~~~~--n~~~~~VdVrDVA~AHv~ 240 (327)
T KOG1502|consen 164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL-AETYP--NFWLAFVDVRDVALAHVL 240 (327)
T ss_pred HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcc-cccCC--CCceeeEeHHHHHHHHHH
Confidence 334888777665 4568999999999999987765322211 012221 22222 344569999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++.|...|+ |.+. +...++.|+++++.+.+...
T Consensus 241 a~E~~~a~GR-yic~--~~~~~~~ei~~~l~~~~P~~ 274 (327)
T KOG1502|consen 241 ALEKPSAKGR-YICV--GEVVSIKEIADILRELFPDY 274 (327)
T ss_pred HHcCcccCce-EEEe--cCcccHHHHHHHHHHhCCCC
Confidence 9999987654 4554 33677999999999876543
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=214.92 Aligned_cols=234 Identities=16% Similarity=0.169 Sum_probs=175.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.|+|+|||||||||+++++.|+++||+|++++|..... . .. ....++++.+|+.|.+.+.++++++|+|||+
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~----~---~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 92 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH----M---SE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL 92 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc----c---cc-ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence 57999999999999999999999999999999863221 0 00 0124678899999999999989999999999
Q ss_pred CCCCcc-----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc-----c--c--ccCCCCCchhhhH
Q 021470 83 ISGVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK-----M--A--NAMEPGRVTFDDK 138 (312)
Q Consensus 83 ~~~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~-----~--~--~~~~p~~~~~~~K 138 (312)
++.... ...|+..+.+++++|++.+ +++||+ |+ ||..... . + .+..|...|..+|
T Consensus 93 Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK 171 (370)
T PLN02695 93 AADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 171 (370)
T ss_pred ccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHH
Confidence 975421 1257888999999999998 999986 43 5532110 0 1 1455666677799
Q ss_pred HHHHHHHHH----hCCCeEEEecccccccccccCC-----CCCc---cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 139 MVVRKAIED----AGIPFTYVSANCFAGYFLGGLC-----QPGS---ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 139 ~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
..+|++++. .+++++++||+.++|+...... ...+ ....+.++.+++++++.++|+|++|+++++..+
T Consensus 172 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~ 251 (370)
T PLN02695 172 LATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRL 251 (370)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHH
Confidence 999998754 6899999999999986422110 0000 001235677889999999999999999999998
Q ss_pred hcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecC
Q 021470 207 INDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSI 248 (312)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 248 (312)
+..+ .+++||+. +++.+|++|+++.+.+..|.+.++...
T Consensus 252 ~~~~--~~~~~nv~-~~~~~s~~el~~~i~~~~g~~~~i~~~ 290 (370)
T PLN02695 252 TKSD--FREPVNIG-SDEMVSMNEMAEIALSFENKKLPIKHI 290 (370)
T ss_pred Hhcc--CCCceEec-CCCceeHHHHHHHHHHHhCCCCCceec
Confidence 7765 35688886 456999999999999999976554433
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=215.25 Aligned_cols=232 Identities=17% Similarity=0.243 Sum_probs=171.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhh----ccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSF----KEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
.|+|||||||||||++|++.|+++ |++|++++|+. .+...+... ...+++++.+|+.|.+.+.++++++|
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~-----~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYN-----DKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCc-----hhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 468999999999999999999998 59999999873 222211111 12468999999999999999999999
Q ss_pred EEEEcCCCCcc----c------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccC------------
Q 021470 78 VVICAISGVHI----R------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAM------------ 128 (312)
Q Consensus 78 ~v~~~~~~~~~----~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~------------ 128 (312)
+|||+|+.... . ..|+.++.+++++|++++ ++||+ |+ ||...... +.|.
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~ 166 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKED 166 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccccc
Confidence 99999985321 0 167788999999998876 67776 43 55321100 1111
Q ss_pred ----------CCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCC---------CCC-----ccCCCCCe
Q 021470 129 ----------EPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLC---------QPG-----SILPSKDS 180 (312)
Q Consensus 129 ----------~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~---------~~~-----~~~~~~~~ 180 (312)
.|...|..+|..+|+++.. .+++++++||+.++|+...... ... .....+++
T Consensus 167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 246 (386)
T PLN02427 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP 246 (386)
T ss_pred ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence 1223566699999999864 5899999999999987532110 000 01134566
Q ss_pred eEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-TLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 181 ~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+.+++++++.++|+|++|+|++++.+++++. ..+++||+.++++.+|+.|+++.+.+.+|.
T Consensus 247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 7778888888999999999999999998764 356788886443589999999999999985
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.7e-29 Score=217.95 Aligned_cols=231 Identities=16% Similarity=0.187 Sum_probs=168.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|||||||||++|++.|+++|++|++++|..... ..+.. ......+++++.+|+.+. .+.++|+|||+|
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~-~~~~~--~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGR-KENLV--HLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc-HhHhh--hhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 7899999999999999999999999999999864322 11111 111234678888888664 356899999999
Q ss_pred CCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---c-----ccCCCCCchhhhHHHH
Q 021470 84 SGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---A-----NAMEPGRVTFDDKMVV 141 (312)
Q Consensus 84 ~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~-----~~~~p~~~~~~~K~~~ 141 (312)
+.... ...|+.++.+++++|++++ + ++|+ |+ ||.....+ + .|..|...|..+|..+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~a 270 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTA 270 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHH
Confidence 85431 1278999999999999998 6 5665 43 55422111 1 2444555676799999
Q ss_pred HHHHHH----hCCCeEEEeccccccccccc----CC-CCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 142 RKAIED----AGIPFTYVSANCFAGYFLGG----LC-QPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 142 e~~~~~----~~~~~~i~r~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
|++++. .+++++++|++.++|..... .. ........++.+.+++++++.++|+|++|+++++..+++.+.
T Consensus 271 E~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~- 349 (436)
T PLN02166 271 ETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH- 349 (436)
T ss_pred HHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-
Confidence 998864 58999999999888864221 10 000112346677788888899999999999999999987653
Q ss_pred CCceEEecCCCCcCCHHHHHHHHHHHhCCcceeec
Q 021470 213 LNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
+++||+++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 350 -~giyNIgs-~~~~Si~ela~~I~~~~g~~~~i~~ 382 (436)
T PLN02166 350 -VGPFNLGN-PGEFTMLELAEVVKETIDSSATIEF 382 (436)
T ss_pred -CceEEeCC-CCcEeHHHHHHHHHHHhCCCCCeee
Confidence 46889864 5599999999999999997765443
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-28 Score=211.10 Aligned_cols=228 Identities=21% Similarity=0.200 Sum_probs=165.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+++|+||||+||||++++++|+++|++|++++|+.... +......+. ..+++++.+|+.|.+++.++++++|+||
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP---KNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh---hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 57899999999999999999999999999999974321 111112221 1357889999999999999999999999
Q ss_pred EcCCCCccc-----cchhHhHHHHHHHHHHhCCCceeec-CC----CCCCccc----c-cc-------cCCCCCchhhhH
Q 021470 81 CAISGVHIR-----SHQILLQLKLVDAIKEAGNVKRFLP-SE----FGTDPAK----M-AN-------AMEPGRVTFDDK 138 (312)
Q Consensus 81 ~~~~~~~~~-----~~~~~~~~~l~~aa~~~~~v~~~v~-S~----~g~~~~~----~-~~-------~~~p~~~~~~~K 138 (312)
|+++..... ..|+.++.+++++|++++ +++||+ |+ ||..... . ++ +..|...|..+|
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK 165 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK 165 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence 999875422 368899999999999998 899886 43 3321110 0 11 222444566699
Q ss_pred HHHHHHHHH----hCCCeEEEecccccccccccCCCCCc----cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 139 MVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGS----ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 139 ~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
..+|+++.. .+++++++||+.++|+.......... ....+... .. ++..++|||++|+|++++.+++.+
T Consensus 166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~--~~~~~~~i~V~Dva~a~~~al~~~ 242 (342)
T PLN02214 166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAK-TY--ANLTQAYVDVRDVALAHVLVYEAP 242 (342)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-cC--CCCCcCeeEHHHHHHHHHHHHhCc
Confidence 999998864 48999999999999975432110000 00112211 22 345689999999999999999887
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.. ++.|++. ++ ..+++|+++.+.+.++
T Consensus 243 ~~-~g~yn~~-~~-~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 243 SA-SGRYLLA-ES-ARHRGEVVEILAKLFP 269 (342)
T ss_pred cc-CCcEEEe-cC-CCCHHHHHHHHHHHCC
Confidence 53 4578875 44 7899999999999986
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-28 Score=210.18 Aligned_cols=234 Identities=21% Similarity=0.283 Sum_probs=171.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC-CHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN-DYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~l~~~~~~~d~v~ 80 (312)
||+|||||||||||++|+++|++. |++|++++|+ ..+.. ..+...+++++.+|+. +.+.+.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~-----~~~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQ-----TDRLG--DLVNHPRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCc-----HHHHH--HhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 468999999999999999999987 6999999986 32221 1122357899999997 7788888889999999
Q ss_pred EcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cc-c-----C-CCCCchhh
Q 021470 81 CAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---AN-A-----M-EPGRVTFD 136 (312)
Q Consensus 81 ~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~-~-----~-~p~~~~~~ 136 (312)
|+++..... +.|+.++.+++++|++.+ ++||+ |+ ||.....+ +. + . .|...|..
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~ 151 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC 151 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH
Confidence 999854311 257888999999999887 57775 43 55322110 11 1 1 23345666
Q ss_pred hHHHHHHHHHH----hCCCeEEEecccccccccccCCCC----------C-ccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 137 DKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQP----------G-SILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 137 ~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+|..+|++++. .+++++++||+.++|+........ . .....++++.+.+++++.++|+|++|+++
T Consensus 152 sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~ 231 (347)
T PRK11908 152 SKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGID 231 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHH
Confidence 99999988864 689999999999888653221100 0 01134566677788889999999999999
Q ss_pred HHHHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCccee
Q 021470 202 YTMKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQK 245 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 245 (312)
++..++.++. ..+++||+.+++..+|++|+++.+.+.+|....+
T Consensus 232 a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~ 277 (347)
T PRK11908 232 ALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY 277 (347)
T ss_pred HHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc
Confidence 9999998763 3467899975445799999999999999965433
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=217.25 Aligned_cols=243 Identities=20% Similarity=0.207 Sum_probs=174.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCCh---------------HHHHHhhhhccCCCeEEEccCCCHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI---------------EKVQMLLSFKEQGAKLVSGSFNDYQ 67 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~l~~~~~~~v~~D~~d~~ 67 (312)
+|+||||||+||||++|+++|+++|++|++++|....... ++.+.+......+++++.+|+.|.+
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~ 126 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE 126 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence 5789999999999999999999999999998753211100 0111111111346899999999999
Q ss_pred HHHHHhc--cCCEEEEcCCCCcc-------------ccchhHhHHHHHHHHHHhCCCc-eeec-C---CCCCCcccc---
Q 021470 68 SLVNAVK--LVDVVICAISGVHI-------------RSHQILLQLKLVDAIKEAGNVK-RFLP-S---EFGTDPAKM--- 124 (312)
Q Consensus 68 ~l~~~~~--~~d~v~~~~~~~~~-------------~~~~~~~~~~l~~aa~~~~~v~-~~v~-S---~~g~~~~~~--- 124 (312)
.+.++++ ++|+|||+++.... ...|+.++.+++++|++.+ ++ +||+ | .||......
T Consensus 127 ~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~E~ 205 (442)
T PLN02572 127 FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIEEG 205 (442)
T ss_pred HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCccc
Confidence 9999998 58999999965321 1268999999999999998 75 7876 3 366421100
Q ss_pred ----------c---ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc------CCC---------C-
Q 021470 125 ----------A---NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG------LCQ---------P- 171 (312)
Q Consensus 125 ----------~---~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~------~~~---------~- 171 (312)
+ .+..|.++|..+|...|.+++. .+++++++||+.++|+.... +.. .
T Consensus 206 ~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~ 285 (442)
T PLN02572 206 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTA 285 (442)
T ss_pred ccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhH
Confidence 1 2445656777799999988754 58999999999999875321 000 0
Q ss_pred ----CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCC--ceEEecCCCCcCCHHHHHHHHHHH---hCCc
Q 021470 172 ----GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLN--RTMYLRPPKNILSQREVVETWEKL---IGKT 242 (312)
Q Consensus 172 ----~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~---~g~~ 242 (312)
......++.+.+++++++.++|+|++|++++++.+++++...+ .+|++. + +.+|+.|+++.+.+. +|.+
T Consensus 286 i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nig-s-~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 286 LNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQF-T-EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred HHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeC-C-CceeHHHHHHHHHHHHHhhCCC
Confidence 0011235567788999999999999999999999998653333 467774 4 489999999999999 8876
Q ss_pred ceeecC
Q 021470 243 LQKSSI 248 (312)
Q Consensus 243 ~~~~~~ 248 (312)
+.+...
T Consensus 364 ~~~~~~ 369 (442)
T PLN02572 364 VEVISV 369 (442)
T ss_pred CCeeeC
Confidence 555443
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=217.03 Aligned_cols=232 Identities=17% Similarity=0.185 Sum_probs=168.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.|+|||||||||||++|++.|+++|++|++++|..... .++. ...+...+++++.+|+.++. +.++|+|||+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~-~~~~--~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHl 190 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR-KENV--MHHFSNPNFELIRHDVVEPI-----LLEVDQIYHL 190 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc-hhhh--hhhccCCceEEEECCccChh-----hcCCCEEEEe
Confidence 37899999999999999999999999999998764322 1111 12233467889999987653 4689999999
Q ss_pred CCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc--c------ccCCCCCchhhhHHH
Q 021470 83 ISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM--A------NAMEPGRVTFDDKMV 140 (312)
Q Consensus 83 ~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~--~------~~~~p~~~~~~~K~~ 140 (312)
|+.... ...|+.++.+++++|++.+ + +||+ |+ ||...... + .|..+...|..+|..
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~ 268 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT 268 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence 985431 1278899999999999998 6 6665 43 54322111 1 133334456669999
Q ss_pred HHHHHHH----hCCCeEEEeccccccccccc----CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGG----LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+|+++.. .+++++++|++.++|+.... ... .......++++.+++++++.++++|++|+|+++..+++.+
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~- 347 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE- 347 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence 9998864 58999999999888864221 100 0011134567778888999999999999999999998765
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeec
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
.++.||+++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 348 -~~g~yNIgs-~~~~sl~Elae~i~~~~g~~~~i~~ 381 (442)
T PLN02206 348 -HVGPFNLGN-PGEFTMLELAKVVQETIDPNAKIEF 381 (442)
T ss_pred -CCceEEEcC-CCceeHHHHHHHHHHHhCCCCceee
Confidence 346889875 4599999999999999987655443
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=212.49 Aligned_cols=236 Identities=17% Similarity=0.173 Sum_probs=170.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
|++|||||||||||+++++.|+++|++++++.++.... . +......+ ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-G-NLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-c-chhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 46999999999999999999999998766554432111 0 01001111 12357889999999999999998 48999
Q ss_pred EEcCCCCccc----------cchhHhHHHHHHHHHHh---------CCCceeec-CC---CCCCcc-----cccccCCCC
Q 021470 80 ICAISGVHIR----------SHQILLQLKLVDAIKEA---------GNVKRFLP-SE---FGTDPA-----KMANAMEPG 131 (312)
Q Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~aa~~~---------~~v~~~v~-S~---~g~~~~-----~~~~~~~p~ 131 (312)
||+++..... ..|+.++.+++++|.+. + ++++|+ |+ ||.... ..+.+..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~ 157 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYAPS 157 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCCCC
Confidence 9999865321 27889999999999863 4 678876 43 553211 113344566
Q ss_pred CchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc--CCCCC-ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQPG-SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..+|.+++. .+++++++||+.++|+.... +.... .....+.++.+++++++.++|+|++|+++++.
T Consensus 158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~ 237 (355)
T PRK10217 158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237 (355)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence 6677799999888753 68999999999998875311 10000 11134556778899999999999999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
.++..+. .+++||+.+ ++.+|+.|+++.+++.+|+..
T Consensus 238 ~~~~~~~-~~~~yni~~-~~~~s~~~~~~~i~~~~~~~~ 274 (355)
T PRK10217 238 CVATTGK-VGETYNIGG-HNERKNLDVVETICELLEELA 274 (355)
T ss_pred HHHhcCC-CCCeEEeCC-CCcccHHHHHHHHHHHhcccc
Confidence 9988754 467888864 559999999999999999643
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=215.99 Aligned_cols=239 Identities=20% Similarity=0.168 Sum_probs=171.4
Q ss_pred CcEEEEE----cCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHH---HHHhhhhccCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLII----GGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEK---VQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
+++|||| |||||||+++++.|+++||+|++++|+......-+ ......+...+++++.+|+.|.+.+. ...+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~ 130 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAG 130 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCC
Confidence 4789999 99999999999999999999999999854210000 00112233457999999987733322 1247
Q ss_pred CCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCC---CcccccccCCCCCchhhhHHHHHHHHHHhCCC
Q 021470 76 VDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT---DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIP 151 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~---~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~ 151 (312)
+|+|||+++.. ...+++++++|+++| +++||+ |+.+. ....+.....+..+ ..+|..+|+++++.+++
T Consensus 131 ~d~Vi~~~~~~------~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p-~~sK~~~E~~l~~~~l~ 202 (378)
T PLN00016 131 FDVVYDNNGKD------LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKP-KAGHLEVEAYLQKLGVN 202 (378)
T ss_pred ccEEEeCCCCC------HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCC-cchHHHHHHHHHHcCCC
Confidence 99999997642 667899999999999 999997 54332 21111001111111 12899999999999999
Q ss_pred eEEEecccccccccccC-CCC-CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHH
Q 021470 152 FTYVSANCFAGYFLGGL-CQP-GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQR 229 (312)
Q Consensus 152 ~~i~r~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ 229 (312)
++++||+.++|+..... ... ......++++.+++++++.++++|++|+|++++.++.++...+++|+++++ +.+|+.
T Consensus 203 ~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~-~~~s~~ 281 (378)
T PLN00016 203 WTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSD-RAVTFD 281 (378)
T ss_pred eEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCC-CccCHH
Confidence 99999999998643211 000 001134556777788888899999999999999999987666788999754 489999
Q ss_pred HHHHHHHHHhCCcceeecCCHH
Q 021470 230 EVVETWEKLIGKTLQKSSISKE 251 (312)
Q Consensus 230 e~~~~~~~~~g~~~~~~~~~~~ 251 (312)
|+++.+.+.+|.+.++...+.+
T Consensus 282 el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 282 GMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred HHHHHHHHHhCCCCceeecCcc
Confidence 9999999999998766555543
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=206.72 Aligned_cols=213 Identities=17% Similarity=0.176 Sum_probs=156.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+||||||+||||+++++.|+++| +|++++|.. ..+.+|+.|.+.+.++++ ++|+|||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~-------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih 60 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS-------------------TDYCGDFSNPEGVAETVRKIRPDVIVN 60 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc-------------------ccccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999999 799888861 124689999999999988 5899999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc---ccccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~~~e~~ 144 (312)
+++..... ..|+.++.+++++|++.+ + ++|+ |+ |+..... .+++..|.+.|..+|..+|++
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~ 138 (299)
T PRK09987 61 AAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKA 138 (299)
T ss_pred CCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence 99876421 268889999999999998 6 5665 43 4432111 145566767777899999999
Q ss_pred HHHhCCCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCC--CCcceeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021470 145 IEDAGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGD--GNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
++....+++++|+++++|+....+..... ....++.+.++++ +.....+...+|+++++..++..+. .+++||+++
T Consensus 139 ~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~-~~giyni~~ 217 (299)
T PRK09987 139 LQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVA 217 (299)
T ss_pred HHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCC-CCCeEEeeC
Confidence 99888889999999998864322211111 1134556777776 4444445556677888777765543 246899875
Q ss_pred CCCcCCHHHHHHHHHHHhC
Q 021470 222 PKNILSQREVVETWEKLIG 240 (312)
Q Consensus 222 ~~~~~s~~e~~~~~~~~~g 240 (312)
+ +.+|+.|+++.+.+..+
T Consensus 218 ~-~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 218 S-GTTTWHDYAALVFEEAR 235 (299)
T ss_pred C-CCccHHHHHHHHHHHHH
Confidence 4 58999999999987643
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=206.72 Aligned_cols=237 Identities=18% Similarity=0.173 Sum_probs=168.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hh---ccCCCeEEEccCCCHHHHHHHhcc--CC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SF---KEQGAKLVSGSFNDYQSLVNAVKL--VD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l---~~~~~~~v~~D~~d~~~l~~~~~~--~d 77 (312)
++||||||+||||++++++|++.|++|++++|+......++...+. .. ...+++++++|+.|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999985421111111110 00 124689999999999999999984 69
Q ss_pred EEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCc---eeec-CC---CCCCccc---ccccCCCCCchhhh
Q 021470 78 VVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVK---RFLP-SE---FGTDPAK---MANAMEPGRVTFDD 137 (312)
Q Consensus 78 ~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~---~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~ 137 (312)
+|||+|+..... +.|+.++.+++++|++.+ ++ +||+ |+ ||..... .+.+..|.++|..+
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s 159 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAA 159 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHH
Confidence 999999964321 246778999999999987 64 6775 43 6643211 14455676777779
Q ss_pred HHHHHHHHHH----hCCCeEEEecccccccccc-cCCCCC----c-cCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 138 KMVVRKAIED----AGIPFTYVSANCFAGYFLG-GLCQPG----S-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 138 K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~-~~~~~~----~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|.+++. .+++++..|+...+++... .+.... . ....++ ...+++++++.++|+|++|++++++.+
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~ 239 (343)
T TIGR01472 160 KLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLM 239 (343)
T ss_pred HHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHH
Confidence 9999998864 4777777775444433211 111100 0 011232 234568889999999999999999999
Q ss_pred hcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 207 INDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
++.+. ++.||+. +++.+|++|+++.+.+.+|++..
T Consensus 240 ~~~~~--~~~yni~-~g~~~s~~e~~~~i~~~~g~~~~ 274 (343)
T TIGR01472 240 LQQDK--PDDYVIA-TGETHSVREFVEVSFEYIGKTLN 274 (343)
T ss_pred HhcCC--CccEEec-CCCceeHHHHHHHHHHHcCCCcc
Confidence 88753 3578886 56699999999999999997653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=226.73 Aligned_cols=231 Identities=20% Similarity=0.223 Sum_probs=169.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHH-HHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQS-LVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~-l~~~~~~~d~v~ 80 (312)
+|+|||||||||||++|+++|+++ |++|++++|..... . ..+...+++++.+|+.|.+. +.++++++|+||
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~----~---~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi 387 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI----S---RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL 387 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh----h---hhcCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence 579999999999999999999986 69999999974321 1 11223478999999998655 577889999999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---ccc------C-CCCCchhh
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANA------M-EPGRVTFD 136 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~------~-~p~~~~~~ 136 (312)
|+|+.... .+.|+.++.+++++|++.+ ++||+ |+ ||...... +.+ . .|...|..
T Consensus 388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~ 465 (660)
T PRK08125 388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSV 465 (660)
T ss_pred ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHH
Confidence 99986442 1267889999999999987 67775 43 55322111 111 1 12235666
Q ss_pred hHHHHHHHHHH----hCCCeEEEecccccccccccCC-----------CCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 137 DKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLC-----------QPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 137 ~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+|..+|++++. .+++++++||+.++|+...... ........++++.+++++++.++|+|++|+++
T Consensus 466 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~ 545 (660)
T PRK08125 466 SKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIE 545 (660)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHH
Confidence 99999999864 5899999999999886432110 00011134566777888899999999999999
Q ss_pred HHHHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 202 YTMKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++.+++++. ..+++|++.++.+.+|++|+++.+.+.+|.+
T Consensus 546 a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 546 ALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred HHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 9999998753 2466888864323799999999999999965
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-27 Score=205.37 Aligned_cols=244 Identities=17% Similarity=0.203 Sum_probs=171.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh---ccCCCeEEEccCCCHHHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF---KEQGAKLVSGSFNDYQSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~l~~~~~--~~d 77 (312)
+++|+||||||++|+++++.|+++|++|++++|..... .......... ...+++++.+|+.|++.+.++++ ++|
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS-EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch-HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 47999999999999999999999999999998764322 1111111111 12468899999999999999886 689
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc---ccccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~~ 140 (312)
+|||+++.... ...|+..+.+++++|++.+ +++||+ |+ ||..... .+.+..|..+|..+|..
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 162 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF 162 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999986431 1267888999999999988 888886 54 4432111 13455566677779999
Q ss_pred HHHHHHH-----hCCCeEEEeccccccccccc--------CC----CCCccCCCC--CeeEEeC------CCCcceeeee
Q 021470 141 VRKAIED-----AGIPFTYVSANCFAGYFLGG--------LC----QPGSILPSK--DSVVLLG------DGNPKAIYVD 195 (312)
Q Consensus 141 ~e~~~~~-----~~~~~~i~r~~~~~~~~~~~--------~~----~~~~~~~~~--~~~~~~~------~~~~~~~~v~ 195 (312)
+|++++. .+++++++|+..++|...+. .. ........+ ..+.+++ ++.+.++|+|
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 242 (352)
T PLN02240 163 IEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIH 242 (352)
T ss_pred HHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEE
Confidence 9999863 35778899987666532110 00 000000111 2344443 6788899999
Q ss_pred HHHHHHHHHHHhcC----CccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 196 EDDIAMYTMKAIND----PRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 196 ~~D~a~~~~~~l~~----~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++|+|++++.++.. +...+++||+++ ++.+|++|+++.+.+.+|.+.++...+
T Consensus 243 v~D~a~a~~~a~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 299 (352)
T PLN02240 243 VMDLADGHIAALRKLFTDPDIGCEAYNLGT-GKGTSVLEMVAAFEKASGKKIPLKLAP 299 (352)
T ss_pred HHHHHHHHHHHHhhhhhccCCCCceEEccC-CCcEeHHHHHHHHHHHhCCCCCceeCC
Confidence 99999998888754 233457888864 569999999999999999876655443
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=206.46 Aligned_cols=228 Identities=20% Similarity=0.246 Sum_probs=162.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|||||||||++++++|+++|++|++++|+.... ++........ ..+++++.+|++|++.+.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR--KKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch--HHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 47999999999999999999999999999999975432 1211111111 2468999999999999999999999999
Q ss_pred EcCCCCcc---------ccchhHhHHHHHHHHHHh-CCCceeec-CCCCC-----Ccc---c-c--cccC------CCCC
Q 021470 81 CAISGVHI---------RSHQILLQLKLVDAIKEA-GNVKRFLP-SEFGT-----DPA---K-M--ANAM------EPGR 132 (312)
Q Consensus 81 ~~~~~~~~---------~~~~~~~~~~l~~aa~~~-~~v~~~v~-S~~g~-----~~~---~-~--~~~~------~p~~ 132 (312)
|+|+.... .+.|+.++.+++++|++. + +++||+ |+.+. ... . . +... .+..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 161 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKN 161 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcccc
Confidence 99986421 125788999999999986 5 899887 54321 110 0 0 1111 1234
Q ss_pred chhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCC---c-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG---S-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..+|.++.. .+++++++||+.++|+......... . ....+... + +.+.++|+|++|+|++++
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~ 237 (322)
T PLN02986 162 WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHI 237 (322)
T ss_pred chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHH
Confidence 466699999877653 6899999999999987543211100 0 00112221 2 245679999999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.+++++... +.|++. . +.+|++|+++++.+.++
T Consensus 238 ~al~~~~~~-~~yni~-~-~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 238 KALETPSAN-GRYIID-G-PIMSVNDIIDILRELFP 270 (322)
T ss_pred HHhcCcccC-CcEEEe-c-CCCCHHHHHHHHHHHCC
Confidence 999987543 478884 3 48999999999999987
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=207.45 Aligned_cols=229 Identities=19% Similarity=0.212 Sum_probs=162.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|||||||||||++++++|+++|++|++++|+.... .+...+..+. ..+++++++|+.|++.+.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP--KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch--hhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 37899999999999999999999999999999974431 1221111111 2468899999999999999999999999
Q ss_pred EcCCCCcc----c-----cchhHhHHHHHHHHHHh-CCCceeec-CC-----CCCCcc---cc---cccCCC------CC
Q 021470 81 CAISGVHI----R-----SHQILLQLKLVDAIKEA-GNVKRFLP-SE-----FGTDPA---KM---ANAMEP------GR 132 (312)
Q Consensus 81 ~~~~~~~~----~-----~~~~~~~~~l~~aa~~~-~~v~~~v~-S~-----~g~~~~---~~---~~~~~p------~~ 132 (312)
|+++.... . ..|+.++.+++++|++. + +++||+ |+ |+.... .+ +.+..| ..
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~ 160 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL 160 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccc
Confidence 99986421 1 25789999999999987 6 899887 44 322110 00 111222 13
Q ss_pred chhhhHHHHHHHHH----HhCCCeEEEecccccccccccCCCCC---cc-CCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLCQPG---SI-LPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..+|+++. +.+++++++||+.++|+......... .. ...+.. .. ++..++|+|++|+|++++
T Consensus 161 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~Dva~a~~ 236 (322)
T PLN02662 161 WYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--TF--PNASYRWVDVRDVANAHI 236 (322)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--cC--CCCCcCeEEHHHHHHHHH
Confidence 45559999998875 36899999999999987543211100 00 011111 11 245689999999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
.+++++... +.|++. ++.+|++|+++.+.+.++.
T Consensus 237 ~~~~~~~~~-~~~~~~--g~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 237 QAFEIPSAS-GRYCLV--ERVVHYSEVVKILHELYPT 270 (322)
T ss_pred HHhcCcCcC-CcEEEe--CCCCCHHHHHHHHHHHCCC
Confidence 999887543 467775 3489999999999998764
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=203.03 Aligned_cols=212 Identities=18% Similarity=0.176 Sum_probs=161.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC--CEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV--DVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~--d~v~~~ 82 (312)
+|+|+||||++|++++++|+++|++|++++|+ .+|+.|.+++.++++++ |+|||+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~~ 57 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAIRPDAVVNT 57 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhCCCCEEEEC
Confidence 58999999999999999999999999999885 47899999999999865 999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~ 145 (312)
++..... ..|+..+.+++++|++.+ + ++|+ |+ |+.....+ +.+..|...|..+|..+|+++
T Consensus 58 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~ 135 (287)
T TIGR01214 58 AAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAI 135 (287)
T ss_pred CccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHH
Confidence 9864321 256788999999999888 5 6665 43 43321111 334455566667999999999
Q ss_pred HHhCCCeEEEecccccccccc-cCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCC
Q 021470 146 EDAGIPFTYVSANCFAGYFLG-GLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPK 223 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~ 223 (312)
+..+.+++++||+.++|.... .+..... ....++.+...+ +..+++++++|+++++..++..+...+++|++++++
T Consensus 136 ~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~ 213 (287)
T TIGR01214 136 RAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSG 213 (287)
T ss_pred HHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCC
Confidence 998999999999999876421 1110000 112334454444 456899999999999999998875567899997654
Q ss_pred CcCCHHHHHHHHHHHhCCcce
Q 021470 224 NILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 224 ~~~s~~e~~~~~~~~~g~~~~ 244 (312)
.+|+.|+++.+++.+|.+..
T Consensus 214 -~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 214 -QCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred -CcCHHHHHHHHHHHhCcccc
Confidence 99999999999999998754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=206.02 Aligned_cols=236 Identities=17% Similarity=0.145 Sum_probs=167.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--------cCCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--------EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--------~~~~~~v~~D~~d~~~l~~~ 72 (312)
|++++||||||+||||+++++.|+++|++|++++|+ .++.+.+..+. ..+++++.+|+.|.+++.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~-----~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~ 125 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDT-----QEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA 125 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence 346899999999999999999999999999999887 33332222221 12578899999999999999
Q ss_pred hccCCEEEEcCCCCcc----------ccchhHhHHHHHHHHHHh-CCCceeec-CC-----CCCC--cc--c-c-c----
Q 021470 73 VKLVDVVICAISGVHI----------RSHQILLQLKLVDAIKEA-GNVKRFLP-SE-----FGTD--PA--K-M-A---- 125 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~-~~v~~~v~-S~-----~g~~--~~--~-~-~---- 125 (312)
++++|.|||+++.... ...|+.++.+++++|++. + ++++|+ |+ ||.. .. . . +
T Consensus 126 i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~ 204 (367)
T PLN02686 126 FDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWS 204 (367)
T ss_pred HHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCC
Confidence 9999999999875421 125788899999999986 6 999887 43 3211 01 0 0 0
Q ss_pred ---ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 ---NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ---~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
.+..|..+|..+|..+|+++.. .+++++++||+.++|+...............+...+++++ ..+++|++|
T Consensus 205 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g--~~~~v~V~D 282 (367)
T PLN02686 205 DESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADG--LLATADVER 282 (367)
T ss_pred ChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCC--CcCeEEHHH
Confidence 1122334566699999998753 5899999999999987532111100001111223444544 357999999
Q ss_pred HHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 199 IAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 199 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
++++++.+++.+ ...+++| ++ +++.+|++|+++.+.+.+|.+....
T Consensus 283 va~A~~~al~~~~~~~~~~~y-i~-~g~~~s~~e~~~~i~~~~g~~~~~~ 330 (367)
T PLN02686 283 LAEAHVCVYEAMGNKTAFGRY-IC-FDHVVSREDEAEELARQIGLPINKI 330 (367)
T ss_pred HHHHHHHHHhccCCCCCCCcE-EE-eCCCccHHHHHHHHHHHcCCCCCcC
Confidence 999999999753 2245566 65 4569999999999999999875543
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=202.69 Aligned_cols=232 Identities=19% Similarity=0.267 Sum_probs=169.5
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhcc--CCEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKL--VDVV 79 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~--~d~v 79 (312)
+|+||||||++|++++++|+++| ++|+++.|.......++. ..+ ...+++++.+|+.|++++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENL---ADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhh---hhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 58999999999999999999987 789988774322111111 112 234788999999999999999987 9999
Q ss_pred EEcCCCCccc----------cchhHhHHHHHHHHHHhCCCc-eeec-CC---CCCCcc----cccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR----------SHQILLQLKLVDAIKEAGNVK-RFLP-SE---FGTDPA----KMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~-~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~~ 140 (312)
||+++..... ..|+.++.+++++|.+.+ .+ ++|+ |+ ||.... ....+..|...|..+|..
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~ 156 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAA 156 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHH
Confidence 9999865321 267888999999999875 33 6665 44 443211 113344555567779999
Q ss_pred HHHHHH----HhCCCeEEEeccccccccccc--CCCC-CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 141 VRKAIE----DAGIPFTYVSANCFAGYFLGG--LCQP-GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 141 ~e~~~~----~~~~~~~i~r~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
+|.+++ +.+++++++||+.++|+.... +... ......++.+.++++++..++|+|++|+++++..+++++. .
T Consensus 157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~-~ 235 (317)
T TIGR01181 157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR-V 235 (317)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC-C
Confidence 998876 358999999999988764211 1100 0011344567778888889999999999999999997653 4
Q ss_pred CceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 214 NRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++|+++++ +.+|+.|+++.+.+.+|.+
T Consensus 236 ~~~~~~~~~-~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 236 GETYNIGGG-NERTNLEVVETILELLGKD 263 (317)
T ss_pred CceEEeCCC-CceeHHHHHHHHHHHhCCC
Confidence 678899754 5899999999999999975
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-26 Score=198.32 Aligned_cols=243 Identities=20% Similarity=0.253 Sum_probs=169.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+|+||||||+||+++++.|+++|++|++++|..... ....+....+...++.++.+|+.|++.+.++++ ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch-HhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 4899999999999999999999999999998753322 111111122233467889999999999999886 6999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccC-CCCCchhhhHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAM-EPGRVTFDDKMVVRK 143 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~-~p~~~~~~~K~~~e~ 143 (312)
+++..... ..|+..+.+++++|++++ +++||+ |+ ||...... +.+. .|...|..+|..+|+
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~ 158 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence 99864321 257788999999999998 899886 44 44221110 2232 355566669999999
Q ss_pred HHHH-----hCCCeEEEecccccccccccC------------CCCCccCCC--CCeeEEeC------CCCcceeeeeHHH
Q 021470 144 AIED-----AGIPFTYVSANCFAGYFLGGL------------CQPGSILPS--KDSVVLLG------DGNPKAIYVDEDD 198 (312)
Q Consensus 144 ~~~~-----~~~~~~i~r~~~~~~~~~~~~------------~~~~~~~~~--~~~~~~~~------~~~~~~~~v~~~D 198 (312)
++++ .+++++++|++.+++..-... ......... ...+.+++ ++.+.++++|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (338)
T PRK10675 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_pred HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence 8874 267889999777665421100 000000011 12233333 5677899999999
Q ss_pred HHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 199 IAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 199 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+|++++.+++.. ...+++|++++ ++.+|++|+++.+.+.+|++.++...+
T Consensus 239 ~a~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T PRK10675 239 LADGHVAAMEKLANKPGVHIYNLGA-GVGSSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_pred HHHHHHHHHHhhhccCCCceEEecC-CCceeHHHHHHHHHHHhCCCCCeeeCC
Confidence 999999998752 22356888864 558999999999999999876655444
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-27 Score=202.19 Aligned_cols=231 Identities=19% Similarity=0.233 Sum_probs=160.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++||||||+||||+++++.|+++|++|++++|+.... .+........ ..+++++.+|+.|.+.+.++++++|+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV--KKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh--HHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 57999999999999999999999999999999974322 1111111111 1257889999999999999999999999
Q ss_pred EcCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeec-CCCCC---Ccc-c--c-cc----------cCCCCCc
Q 021470 81 CAISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT---DPA-K--M-AN----------AMEPGRV 133 (312)
Q Consensus 81 ~~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~---~~~-~--~-~~----------~~~p~~~ 133 (312)
|+++.... ...|+.++.+++++|++.+.+++||+ |+.+. ... . . ++ +..|..+
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 162 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM 162 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence 99985431 12578899999999998764678886 54321 100 0 0 11 0112335
Q ss_pred hhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCcc----CCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGSI----LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..+|.+++. ++++++++||+.++|+........... ...+.. ..++. ...++|+|++|+|++++.
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~r~~v~V~Dva~a~~~ 240 (351)
T PLN02650 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYSI-IKQGQFVHLDDLCNAHIF 240 (351)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccCc-CCCcceeeHHHHHHHHHH
Confidence 66699999987753 589999999999998754322111100 011111 11221 234799999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
+++++.. ++.| +++ ++.+|+.|+++.+.+.++
T Consensus 241 ~l~~~~~-~~~~-i~~-~~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 241 LFEHPAA-EGRY-ICS-SHDATIHDLAKMLREKYP 272 (351)
T ss_pred HhcCcCc-CceE-Eec-CCCcCHHHHHHHHHHhCc
Confidence 9987653 3466 544 458999999999999876
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-27 Score=202.26 Aligned_cols=234 Identities=20% Similarity=0.243 Sum_probs=168.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+||||+|++|+++++.|+++|++|++++|+.... ..+...+++++.+|+.|.+++.++++++|+|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a 72 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVA 72 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc--------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEec
Confidence 4899999999999999999999999999999974321 12234478999999999999999999999999999
Q ss_pred CCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCC-cccc---cccCCC---CCchhhhHHHHHHH
Q 021470 84 SGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTD-PAKM---ANAMEP---GRVTFDDKMVVRKA 144 (312)
Q Consensus 84 ~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~-~~~~---~~~~~p---~~~~~~~K~~~e~~ 144 (312)
+.... ...|+.++.+++++|++.+ ++++|+ |+ |+.. .... +.+..| ...|..+|..+|++
T Consensus 73 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~ 151 (328)
T TIGR03466 73 ADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA 151 (328)
T ss_pred eecccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence 75421 1267888999999999998 899886 43 4421 1100 222222 22455599999988
Q ss_pred HHH----hCCCeEEEecccccccccccCCCCC--ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021470 145 IED----AGIPFTYVSANCFAGYFLGGLCQPG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 145 ~~~----~~~~~~i~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
++. .+++++++||+.++|.......... +.....+..+... +...+++|++|+|+++..+++++. .+..|+
T Consensus 152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~a~a~~~~~~~~~-~~~~~~ 228 (328)
T TIGR03466 152 ALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV--DTGLNLVHVDDVAEGHLLALERGR-IGERYI 228 (328)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee--CCCcceEEHHHHHHHHHHHHhCCC-CCceEE
Confidence 875 4899999999999886432111100 0000011122222 234689999999999999998764 455665
Q ss_pred ecCCCCcCCHHHHHHHHHHHhCCcceeecCCHH
Q 021470 219 LRPPKNILSQREVVETWEKLIGKTLQKSSISKE 251 (312)
Q Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 251 (312)
+ + ++.+|++|+++.+.+.+|++.....+|..
T Consensus 229 ~-~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 259 (328)
T TIGR03466 229 L-G-GENLTLKQILDKLAEITGRPAPRVKLPRW 259 (328)
T ss_pred e-c-CCCcCHHHHHHHHHHHhCCCCCCCcCCHH
Confidence 5 4 45899999999999999988776667654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-27 Score=201.12 Aligned_cols=235 Identities=19% Similarity=0.182 Sum_probs=163.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.+++||||||+||||++++++|+++|++|++++|+.... .+......+.. .+++++.+|+.|++.+.++++++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ--KKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH--HHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 468999999999999999999999999999999885432 11111111211 358899999999999999999999999
Q ss_pred EcCCCCccc---------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCc----cc-c-c----------ccCCCC
Q 021470 81 CAISGVHIR---------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDP----AK-M-A----------NAMEPG 131 (312)
Q Consensus 81 ~~~~~~~~~---------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~----~~-~-~----------~~~~p~ 131 (312)
|+|+..... ..|+.++.+++++|.+.+.+++||+ |+ |+... .. . + .+..|.
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~ 165 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT 165 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence 999854211 2578889999999988633889886 43 44211 00 0 1 122345
Q ss_pred CchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCC----ccCCCCCeeEEeC-CC----CcceeeeeHHH
Q 021470 132 RVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG----SILPSKDSVVLLG-DG----NPKAIYVDEDD 198 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~----~~~~~~v~~~D 198 (312)
.+|..+|..+|.++.. .+++++++||+.++|+......... .....+..+.+.+ .+ +..++|+|++|
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 5677799999987764 5899999999999987532111100 0011222333332 11 22479999999
Q ss_pred HHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
++++++.+++.+.. ++.| +++ ++.+|+.|+++.+.+.++.
T Consensus 246 ~a~a~~~~~~~~~~-~~~~-~~~-~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 246 VCRAHIFLAEKESA-SGRY-ICC-AANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred HHHHHHHHhhCcCc-CCcE-EEe-cCCCCHHHHHHHHHHHCCC
Confidence 99999999987643 3456 433 4578999999999988763
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.9e-27 Score=217.83 Aligned_cols=237 Identities=17% Similarity=0.208 Sum_probs=176.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh--ccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV--KLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~--~~~d~ 78 (312)
.|+|||||||||||+++++.|+++ +++|++++|.......... .......+++++.+|+.|.+.+..++ .++|+
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l--~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNL--NPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhh--hhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 579999999999999999999998 5899999875321101110 01112357899999999999888776 48999
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc------ccccCCCCCchhhhH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK------MANAMEPGRVTFDDK 138 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~------~~~~~~p~~~~~~~K 138 (312)
|||+|+..... ..|+.++.+++++|++.+.+++||+ |+ ||..... .+.+..|.++|..+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 99999975421 2678899999999999875789987 43 5543211 133445667777799
Q ss_pred HHHHHHHHH----hCCCeEEEeccccccccccc--CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..+|++++. .+++++++||+.++|..... +.. .......++.+.+++++++.++|+|++|+|+++..++..+.
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~ 243 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 999998864 58999999999998864211 110 00111345677788889999999999999999999987653
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
.+++|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 244 -~~~vyni~~-~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 244 -VGHVYNIGT-KKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred -CCCEEEECC-CCeeEHHHHHHHHHHHhCCCC
Confidence 467888864 458999999999999999764
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=200.13 Aligned_cols=234 Identities=17% Similarity=0.205 Sum_probs=168.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
|+|||||||||||++++++|+++|++ |+++.|........+. ..+ ...+++++.+|+.|.+++.++++ ++|+|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL---ADVSDSERYVFEHADICDRAELDRIFAQHQPDAV 77 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH---HhcccCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence 48999999999999999999999975 5555553221101111 112 12457889999999999999997 48999
Q ss_pred EEcCCCCcc----------ccchhHhHHHHHHHHHHh--------CCCceeec-CC---CCCCc-------------ccc
Q 021470 80 ICAISGVHI----------RSHQILLQLKLVDAIKEA--------GNVKRFLP-SE---FGTDP-------------AKM 124 (312)
Q Consensus 80 ~~~~~~~~~----------~~~~~~~~~~l~~aa~~~--------~~v~~~v~-S~---~g~~~-------------~~~ 124 (312)
||+++.... ...|+.++.+++++|++. +.++++|+ |+ ||... ...
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 999986431 137899999999999875 12567775 43 55311 011
Q ss_pred cccCCCCCchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc--CCCCC-ccCCCCCeeEEeCCCCcceeeeeHH
Q 021470 125 ANAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQPG-SILPSKDSVVLLGDGNPKAIYVDED 197 (312)
Q Consensus 125 ~~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~ 197 (312)
+.+..|...|..+|..+|.+++. .+++++++|++.++|+.... +.... .....++.+.+++++++.++++|++
T Consensus 158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (352)
T PRK10084 158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (352)
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHH
Confidence 34556667777799999988864 58999999999888864211 11100 0113355677788899999999999
Q ss_pred HHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 198 DIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 198 D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
|+++++..+++.+. .++.|++. +++..|+.|+++.+++.+|..
T Consensus 238 D~a~a~~~~l~~~~-~~~~yni~-~~~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 238 DHARALYKVVTEGK-AGETYNIG-GHNEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHHHhcCC-CCceEEeC-CCCcCcHHHHHHHHHHHhccc
Confidence 99999999888653 46788886 455899999999999999964
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-27 Score=190.42 Aligned_cols=211 Identities=18% Similarity=0.148 Sum_probs=169.6
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~~ 82 (312)
+|||||++|++|..|++.|. .+++|++++|. ..|++|++.+.++++ .+|+|||+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~-----------------------~~Ditd~~~v~~~i~~~~PDvVIn~ 57 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRA-----------------------ELDITDPDAVLEVIRETRPDVVINA 57 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCc-----------------------cccccChHHHHHHHHhhCCCEEEEC
Confidence 49999999999999999998 66999999997 389999999999998 68999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCC---CCC----CcccccccCCCCCchhhhHHHHHHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGT----DPAKMANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~----~~~~~~~~~~p~~~~~~~K~~~e~~~ 145 (312)
|+..... .+|..+..+++++|.+.| .+.+..|+ |.. ++.+ +++..|.+-|+.+|...|..+
T Consensus 58 AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVFDG~~~~~Y~E-~D~~~P~nvYG~sKl~GE~~v 135 (281)
T COG1091 58 AAYTAVDKAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVFDGEKGGPYKE-TDTPNPLNVYGRSKLAGEEAV 135 (281)
T ss_pred ccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEecCCCCCCCCC-CCCCCChhhhhHHHHHHHHHH
Confidence 9987642 178999999999999999 66555563 221 2222 667778777777999999999
Q ss_pred HHhCCCeEEEecccccccccccCCCCCccC-CCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCC
Q 021470 146 EDAGIPFTYVSANCFAGYFLGGLCQPGSIL-PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKN 224 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~ 224 (312)
++.+....|+|.+++++..-.+|....+.. ..+..+.+.. ++..++++..|+|+++..++..... +++||+.+++
T Consensus 136 ~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~-~~~yH~~~~g- 211 (281)
T COG1091 136 RAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKE-GGVYHLVNSG- 211 (281)
T ss_pred HHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhcccc-CcEEEEeCCC-
Confidence 999999999999999987555554332222 3344555544 7788999999999999999988753 4499999877
Q ss_pred cCCHHHHHHHHHHHhCCccee
Q 021470 225 ILSQREVVETWEKLIGKTLQK 245 (312)
Q Consensus 225 ~~s~~e~~~~~~~~~g~~~~~ 245 (312)
..|+.|+++.+.+..|.+...
T Consensus 212 ~~Swydfa~~I~~~~~~~~~v 232 (281)
T COG1091 212 ECSWYEFAKAIFEEAGVDGEV 232 (281)
T ss_pred cccHHHHHHHHHHHhCCCccc
Confidence 789999999999999976543
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=196.31 Aligned_cols=227 Identities=25% Similarity=0.317 Sum_probs=172.4
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC-CEEEEcC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV-DVVICAI 83 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~-d~v~~~~ 83 (312)
+|||||||||||++|++.|+++||+|++++|...... ... .++.++.+|++|.+.+.++.+++ |+|||++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~a 72 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD--------PLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLA 72 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc--------ccc-cccceeeecccchHHHHHHHhcCCCEEEEcc
Confidence 5999999999999999999999999999999854331 111 57889999999998888888888 9999999
Q ss_pred CCCcc-----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCC-c---cccc-ccCCCCCchhhhHHHHHH
Q 021470 84 SGVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTD-P---AKMA-NAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 84 ~~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~-~---~~~~-~~~~p~~~~~~~K~~~e~ 143 (312)
+.... ...|+.++.+++++|++.+ ++++|+ |+ ++.. . ...+ .+..|..+|..+|..+|+
T Consensus 73 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~ 151 (314)
T COG0451 73 AQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQ 151 (314)
T ss_pred ccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHH
Confidence 97642 1378899999999999988 999987 43 2221 0 0102 345555546669999999
Q ss_pred HHHHh----CCCeEEEecccccccccccCCC-CCc---c--CCCCCe-eEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 144 AIEDA----GIPFTYVSANCFAGYFLGGLCQ-PGS---I--LPSKDS-VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 144 ~~~~~----~~~~~i~r~~~~~~~~~~~~~~-~~~---~--~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
.+... +++++++||+.++|+....... ... . ...+.+ ....++++..++++|++|+++++..+++++..
T Consensus 152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~ 231 (314)
T COG0451 152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG 231 (314)
T ss_pred HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC
Confidence 99863 5999999999888765332211 000 0 123333 55666778888999999999999999998864
Q ss_pred CCceEEecCCCC-cCCHHHHHHHHHHHhCCcce
Q 021470 213 LNRTMYLRPPKN-ILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 213 ~~~~~~~~~~~~-~~s~~e~~~~~~~~~g~~~~ 244 (312)
. .|++. ++. .+|.+|+++.+.+.+|.+..
T Consensus 232 ~--~~ni~-~~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 232 G--VFNIG-SGTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred c--EEEeC-CCCCcEEHHHHHHHHHHHhCCCCc
Confidence 4 77775 454 79999999999999998865
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=202.93 Aligned_cols=258 Identities=20% Similarity=0.177 Sum_probs=168.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
||||||||+|++|++|++.|.++|++|+++.|. ..|+.|.+.+.+.++ ++|+|||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~~pd~Vin 57 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAFKPDVVIN 57 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH--SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHhCCCeEec
Confidence 799999999999999999999999999999775 678999999999987 5899999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCC---CCCC----cccccccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGTD----PAKMANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~----~~~~~~~~~p~~~~~~~K~~~e~~ 144 (312)
|++..... ..|+..+.+++++|.+.+ ++.+.+|+ |+.. ..+ +++..|.+.|+.+|.++|+.
T Consensus 58 ~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~~li~~STd~VFdG~~~~~y~E-~d~~~P~~~YG~~K~~~E~~ 135 (286)
T PF04321_consen 58 CAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG-ARLIHISTDYVFDGDKGGPYTE-DDPPNPLNVYGRSKLEGEQA 135 (286)
T ss_dssp ------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-T-TS----SSHHHHHHHHHHHH
T ss_pred cceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-CcEEEeeccEEEcCCccccccc-CCCCCCCCHHHHHHHHHHHH
Confidence 99876521 278899999999999999 65555554 4322 222 55667777788899999999
Q ss_pred HHHhCCCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc---cCCceEEec
Q 021470 145 IEDAGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR---TLNRTMYLR 220 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~---~~~~~~~~~ 220 (312)
+++..-.+.|+|+++++|..-..+..... ....++.+.+.. +..+++++++|+|+++..++++.. ...++||++
T Consensus 136 v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~ 213 (286)
T PF04321_consen 136 VRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLS 213 (286)
T ss_dssp HHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE--
T ss_pred HHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEe
Confidence 99877799999999988872222221110 113455666655 667899999999999999998753 245799998
Q ss_pred CCCCcCCHHHHHHHHHHHhCCcc-eeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCC
Q 021470 221 PPKNILSQREVVETWEKLIGKTL-QKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEI 299 (312)
Q Consensus 221 ~~~~~~s~~e~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (312)
|++ .+|+.|+++.+.+.+|.+. .+.+++..++.... ..... ..++ ..++...+ ++
T Consensus 214 ~~~-~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~------------------~rp~~--~~L~--~~kl~~~~-g~ 269 (286)
T PF04321_consen 214 GPE-RVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAA------------------PRPRN--TSLD--CRKLKNLL-GI 269 (286)
T ss_dssp -BS--EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSS------------------GS-SB--E-B----HHHHHCT-TS
T ss_pred cCc-ccCHHHHHHHHHHHhCCCCceEEecccccCCCCC------------------CCCCc--cccc--HHHHHHcc-CC
Confidence 765 8999999999999999876 45565543220000 01111 1222 12555555 78
Q ss_pred cccCHHHHHHhhC
Q 021470 300 KYTTVEEYLRRYL 312 (312)
Q Consensus 300 ~~~~~~e~~~~~~ 312 (312)
++.+|+|.|++++
T Consensus 270 ~~~~~~~~l~~~~ 282 (286)
T PF04321_consen 270 KPPPWREGLEELV 282 (286)
T ss_dssp ---BHHHHHHHHH
T ss_pred CCcCHHHHHHHHH
Confidence 9999999998753
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-26 Score=196.25 Aligned_cols=236 Identities=15% Similarity=0.113 Sum_probs=165.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh---hccCCCeEEEccCCCHHHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS---FKEQGAKLVSGSFNDYQSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---l~~~~~~~v~~D~~d~~~l~~~~~--~~d 77 (312)
+++||||||+||||++++++|+++|++|++++|++......+.+.... ....+++++.+|+.|.+.+.++++ ++|
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999998754211111211100 012458899999999999999988 479
Q ss_pred EEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCc-----eeec-C---CCCCCcc--cccccCCCCCchhh
Q 021470 78 VVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVK-----RFLP-S---EFGTDPA--KMANAMEPGRVTFD 136 (312)
Q Consensus 78 ~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~-----~~v~-S---~~g~~~~--~~~~~~~p~~~~~~ 136 (312)
+|||+|+..... +.|+.++.+++++|++.+ ++ +||+ | .||.... ..+.+..|...|..
T Consensus 86 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~ 164 (340)
T PLN02653 86 EVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAV 164 (340)
T ss_pred EEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHH
Confidence 999999864321 267888999999999988 64 6765 3 3664322 11445566666777
Q ss_pred hHHHHHHHHHH----hCCCeEEEeccccccc-ccccCCCCCc-----cCCCCCeeE-EeCCCCcceeeeeHHHHHHHHHH
Q 021470 137 DKMVVRKAIED----AGIPFTYVSANCFAGY-FLGGLCQPGS-----ILPSKDSVV-LLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 ~K~~~e~~~~~----~~~~~~i~r~~~~~~~-~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..+|.+++. .+++++..|+...+++ ....+....+ ....+.... +.+++++.++|+|++|+|++++.
T Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~ 244 (340)
T PLN02653 165 AKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWL 244 (340)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHH
Confidence 99999998864 4666665554333322 1111111000 001233333 45888999999999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++.+. ++.||+. +++.+|+.|+++.+.+.+|.+
T Consensus 245 ~~~~~~--~~~yni~-~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 245 MLQQEK--PDDYVVA-TEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHhcCC--CCcEEec-CCCceeHHHHHHHHHHHcCCC
Confidence 998753 4678886 566999999999999999964
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-26 Score=195.82 Aligned_cols=236 Identities=17% Similarity=0.143 Sum_probs=168.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~ 78 (312)
|+.|+|+||||+||||+++++.|+++|++|++++|+.... +.....+ . ...+++++.+|+.|.+++.+++++ +|+
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~-~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS-PNLFELL-N-LAKKIEDHFGDIRDAAKLRKAIAEFKPEI 78 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc-hhHHHHH-h-hcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence 3458999999999999999999999999999999875432 1111111 1 123678899999999999999884 699
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCc----ccccccCCCCCchhhhHHH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDP----AKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~----~~~~~~~~p~~~~~~~K~~ 140 (312)
|||+++..... ..|+.++.+++++|++.+.++++|+ |+ |+... ...+.+..|..+|..+|..
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~ 158 (349)
T TIGR02622 79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKAC 158 (349)
T ss_pred EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence 99999854211 2678899999999987654678886 43 44321 1113345566677779999
Q ss_pred HHHHHHHh-----------CCCeEEEecccccccccc---cCCCCCcc-CCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 141 VRKAIEDA-----------GIPFTYVSANCFAGYFLG---GLCQPGSI-LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 141 ~e~~~~~~-----------~~~~~i~r~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|.+++.. +++++++||+.++|+... .+...... ...+..+. ++++++.++|+|++|++++++.
T Consensus 159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHH
Confidence 99888642 789999999999986421 11111011 12344444 5678889999999999999998
Q ss_pred HhcCC----ccCCceEEecCC-CCcCCHHHHHHHHHHHhC
Q 021470 206 AINDP----RTLNRTMYLRPP-KNILSQREVVETWEKLIG 240 (312)
Q Consensus 206 ~l~~~----~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g 240 (312)
+++.. ...++.||+.+. ++..|..|+++.+.+.++
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 87642 123568888532 369999999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-25 Score=191.77 Aligned_cols=240 Identities=23% Similarity=0.321 Sum_probs=169.8
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~~ 82 (312)
+|+||||||+||+++++.|+++|++|+++.|..... ..+...... ..+++++.+|+.+++++.++++ ++|+|||+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ 77 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS-PEALKRGER--ITRVTFVEGDLRDRELLDRLFEEHKIDAVIHF 77 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc-hhhhhhhcc--ccceEEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence 589999999999999999999999999887643322 222211111 1257889999999999999987 69999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc---ccccCCCCCchhhhHHHHHHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~~~e~~~ 145 (312)
++..... ..|+..+.+++++|.+.+ ++++|+ |+ |+..... .+.+..|...|..+|..+|.++
T Consensus 78 ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~ 156 (328)
T TIGR01179 78 AGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERIL 156 (328)
T ss_pred ccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHH
Confidence 9864321 267888999999999988 888886 33 3322111 1334445566777999999888
Q ss_pred HH-----hCCCeEEEecccccccccccCCCC-----C-cc-----CC--CCCeeEEe------CCCCcceeeeeHHHHHH
Q 021470 146 ED-----AGIPFTYVSANCFAGYFLGGLCQP-----G-SI-----LP--SKDSVVLL------GDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 146 ~~-----~~~~~~i~r~~~~~~~~~~~~~~~-----~-~~-----~~--~~~~~~~~------~~~~~~~~~v~~~D~a~ 201 (312)
+. .+++++++||+.++|......... . .. .. ....+..+ ++++..++|||++|+++
T Consensus 157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~ 236 (328)
T TIGR01179 157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD 236 (328)
T ss_pred HHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence 64 588999999998888643221100 0 00 00 11222222 35667789999999999
Q ss_pred HHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 202 YTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 202 ~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++..++... ...+++|++++ ++.+|++|+++.+++.+|++.++...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~n~~~-~~~~s~~ei~~~~~~~~g~~~~~~~~~ 285 (328)
T TIGR01179 237 AHLAALEYLLNGGESHVYNLGY-GQGFSVLEVIEAFKKVSGVDFPVELAP 285 (328)
T ss_pred HHHHHHhhhhcCCCcceEEcCC-CCcccHHHHHHHHHHHhCCCcceEeCC
Confidence 999998652 23467888875 459999999999999999887665433
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=210.26 Aligned_cols=243 Identities=14% Similarity=0.161 Sum_probs=173.8
Q ss_pred cEEEEEcCCchhhHHHHHHHH--hCCCeEEEEECCCCCCChHHHHH-hhhhccCCCeEEEccCCCH------HHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASL--ALGHETYVLHRPEIGVDIEKVQM-LLSFKEQGAKLVSGSFNDY------QSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~------~~l~~~~~ 74 (312)
|+|||||||||||+++++.|+ +.|++|++++|+.. ..+... ...+...+++++.+|+.|+ +.+.++ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQS---LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcch---HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 489999999999999999999 57899999999632 222211 1112225789999999883 556665 8
Q ss_pred cCCEEEEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc-----cccCCCCCchhhhH
Q 021470 75 LVDVVICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM-----ANAMEPGRVTFDDK 138 (312)
Q Consensus 75 ~~d~v~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~-----~~~~~p~~~~~~~K 138 (312)
++|+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ +|...... +.+..+..+|..+|
T Consensus 77 ~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK 155 (657)
T PRK07201 77 DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTK 155 (657)
T ss_pred CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHH
Confidence 99999999986542 1368999999999999998 899887 43 33221110 11222335677799
Q ss_pred HHHHHHHHH-hCCCeEEEecccccccccccCCCC---------Ccc--CCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 139 MVVRKAIED-AGIPFTYVSANCFAGYFLGGLCQP---------GSI--LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 139 ~~~e~~~~~-~~~~~~i~r~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+++|+++++ .+++++++||+.++|......... .+. ..........+.+....++++++|+++++..+
T Consensus 156 ~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~ 235 (657)
T PRK07201 156 FEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHL 235 (657)
T ss_pred HHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHH
Confidence 999999984 689999999999988532110000 000 01111233344556678999999999999999
Q ss_pred hcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc---eeecCCHHH
Q 021470 207 INDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL---QKSSISKEE 252 (312)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~---~~~~~~~~~ 252 (312)
+..+...+++|+++++ +.+|+.|+++.+.+.+|.+. ....+|...
T Consensus 236 ~~~~~~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~ 283 (657)
T PRK07201 236 MHKDGRDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGFV 283 (657)
T ss_pred hcCcCCCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChHH
Confidence 8876666789999765 49999999999999999887 556666643
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=190.27 Aligned_cols=206 Identities=24% Similarity=0.314 Sum_probs=159.7
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC--CEEEEcC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV--DVVICAI 83 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~--d~v~~~~ 83 (312)
|||+|||||+|++++++|+++|++|+.++|+..... ... ...+++++.+|+.|.+.+.+++++. |+|||++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~-~~~------~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSES-FEE------KKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGH-HHH------HHTTEEEEESETTSHHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccc-ccc------ccceEEEEEeeccccccccccccccCceEEEEee
Confidence 799999999999999999999999999999865431 111 1228899999999999999999865 9999999
Q ss_pred CCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc---cccCCCCCchhhhHHHHHHHHH
Q 021470 84 SGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM---ANAMEPGRVTFDDKMVVRKAIE 146 (312)
Q Consensus 84 ~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~~ 146 (312)
+.... ...|+..+.+++++|++.+ ++++|+ | .|+...... +.+..|..+|..+|...|++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~ 152 (236)
T PF01370_consen 74 AFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLR 152 (236)
T ss_dssp SSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 98631 1267889999999999999 788886 3 355442211 3344566667779999999887
Q ss_pred H----hCCCeEEEecccccccccccCCCCC------ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCce
Q 021470 147 D----AGIPFTYVSANCFAGYFLGGLCQPG------SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216 (312)
Q Consensus 147 ~----~~~~~~i~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~ 216 (312)
. .+++++++||+.++|+......... .....++++.++++++..++++|++|+|+++..+++++...+++
T Consensus 153 ~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~ 232 (236)
T PF01370_consen 153 DYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGI 232 (236)
T ss_dssp HHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEE
T ss_pred ccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCE
Confidence 4 4899999999999988711000000 01134566888999999999999999999999999998767889
Q ss_pred EEe
Q 021470 217 MYL 219 (312)
Q Consensus 217 ~~~ 219 (312)
||+
T Consensus 233 yNi 235 (236)
T PF01370_consen 233 YNI 235 (236)
T ss_dssp EEE
T ss_pred EEe
Confidence 887
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=192.38 Aligned_cols=219 Identities=19% Similarity=0.202 Sum_probs=163.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
+.++||||||+|+||+++++.|+++| ++|++++|+. .+.. ....+...+++++.+|+.|++.+.++++++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~-----~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDE-----LKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCCh-----hHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence 46899999999999999999999986 7899998873 2221 11222234688999999999999999999999
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED 147 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~ 147 (312)
|||+++..... ..|+.++.+++++|.+.+ +++||+ |+.. +..|..+|..+|..+|.+++.
T Consensus 78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~--------~~~p~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK--------AANPINLYGATKLASDKLFVA 148 (324)
T ss_pred EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC--------CCCCCCHHHHHHHHHHHHHHH
Confidence 99999864321 267889999999999988 889887 5422 223345677799999988753
Q ss_pred -------hCCCeEEEeccccccccc---ccCCCCCccCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCce
Q 021470 148 -------AGIPFTYVSANCFAGYFL---GGLCQPGSILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216 (312)
Q Consensus 148 -------~~~~~~i~r~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~ 216 (312)
.+++++++||+.++|+.. +.+... ...+. .+++ .+++..++|+|++|++++++.+++... .+.+
T Consensus 149 ~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~---~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~-~~~~ 223 (324)
T TIGR03589 149 ANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSL---KEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML-GGEI 223 (324)
T ss_pred HHhhccccCcEEEEEeecceeCCCCCcHHHHHHH---HHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC-CCCE
Confidence 578999999999998531 111111 01222 3444 356778899999999999999998753 3455
Q ss_pred EEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 217 MYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 217 ~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
| + +.+...++.|+++.+.+....
T Consensus 224 ~-~-~~~~~~sv~el~~~i~~~~~~ 246 (324)
T TIGR03589 224 F-V-PKIPSMKITDLAEAMAPECPH 246 (324)
T ss_pred E-c-cCCCcEEHHHHHHHHHhhCCe
Confidence 5 4 455579999999999997543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=177.24 Aligned_cols=178 Identities=25% Similarity=0.357 Sum_probs=141.0
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
|+|+||||++|+.++++|+++|++|++++|+ +++.+. ..+++++++|+.|++++.++++++|+||++++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~-----~~~~~~-----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRS-----PSKAED-----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESS-----GGGHHH-----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecC-----chhccc-----ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 7999999999999999999999999999999 554422 689999999999999999999999999999987
Q ss_pred CccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc---cccCCC-CCchhhhHHHHHHHHHHhCCCeEEEecccc
Q 021470 86 VHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM---ANAMEP-GRVTFDDKMVVRKAIEDAGIPFTYVSANCF 160 (312)
Q Consensus 86 ~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~---~~~~~p-~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~ 160 (312)
... +....+++++++++++ ++++|+ |+.+...... .....+ ...++..|...|+.+++.+++|+++||+.+
T Consensus 71 ~~~---~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~ 146 (183)
T PF13460_consen 71 PPK---DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWI 146 (183)
T ss_dssp TTT---HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEE
T ss_pred hcc---cccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEe
Confidence 654 3888999999999999 999886 6555433221 011111 135667999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 161 AGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+++... ........+....++|+.+|+|++++.++++
T Consensus 147 ~~~~~~------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 147 YGNPSR------------SYRLIKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EBTTSS------------SEEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred EeCCCc------------ceeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 987422 0111111445567999999999999998864
|
... |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=191.83 Aligned_cols=230 Identities=17% Similarity=0.191 Sum_probs=161.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+||||+||||+++++.|+++|++|++++|+.... . +........ ..+++++.+|++|.+++.++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR-K-KTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch-h-hHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 57999999999999999999999999999998875432 1 111111111 2368899999999999999999999999
Q ss_pred EcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCc-----c---cccccCCC------CC
Q 021470 81 CAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDP-----A---KMANAMEP------GR 132 (312)
Q Consensus 81 ~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~-----~---~~~~~~~p------~~ 132 (312)
|+++..... ..|+.++.+++++|.+...+++||+ |+ ++... . ..+.+..| ..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999864211 2578889999999988532678886 44 22111 0 00222222 23
Q ss_pred chhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCC---Cc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQP---GS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
+|..+|..+|.++.. .+++++++||+.++|+........ .+ ....++.. .+ ...++|+|++|+|++++
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~ 238 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHV 238 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHH
Confidence 466699999988764 589999999999998754321110 00 00112221 11 34478999999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
.+++.+.. ++.|++ +++ .+|++|+++.+.+.++.
T Consensus 239 ~~l~~~~~-~~~~ni-~~~-~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 239 KALETPSA-NGRYII-DGP-VVTIKDIENVLREFFPD 272 (325)
T ss_pred HHhcCccc-CceEEE-ecC-CCCHHHHHHHHHHHCCC
Confidence 99987653 457888 434 89999999999999874
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=207.88 Aligned_cols=199 Identities=20% Similarity=0.223 Sum_probs=157.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|||||||||++++++|+++|++|++++|+... . + ..+++++.+|+.|.+++.++++++|+|||++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~----~------~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlA 69 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD----S------W-PSSADFIAADIRDATAVESAMTGADVVAHCA 69 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh----h------c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECC
Confidence 489999999999999999999999999999997321 0 1 2368899999999999999999999999999
Q ss_pred CCCc-cccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccc
Q 021470 84 SGVH-IRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFA 161 (312)
Q Consensus 84 ~~~~-~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~ 161 (312)
+... ....|+.++.+++++|++.+ +++||+ |+.. |.++|+++.+++++++++||+.++
T Consensus 70 a~~~~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VY 129 (854)
T PRK05865 70 WVRGRNDHINIDGTANVLKAMAETG-TGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIF 129 (854)
T ss_pred CcccchHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEe
Confidence 8643 23578999999999999998 889887 5421 888999998899999999999999
Q ss_pred ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 162 GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
|+....+... .........++++..++|+|++|+++++..++..+...+++||++++ +.+|++|+++.+.+.
T Consensus 130 GP~~~~~i~~----ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg-~~~Si~EIae~l~~~ 201 (854)
T PRK05865 130 GRNVDNWVQR----LFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAP-GELTFRRIAAALGRP 201 (854)
T ss_pred CCChHHHHHH----HhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECC-CcccHHHHHHHHhhh
Confidence 8643322211 11112222344556779999999999999998765445678999754 589999999988764
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-25 Score=188.67 Aligned_cols=219 Identities=16% Similarity=0.140 Sum_probs=150.6
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHH-HHHHhc-----cC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQS-LVNAVK-----LV 76 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~-l~~~~~-----~~ 76 (312)
|||||||||||++|+++|++.|++++++.|+.... .+. ..++++|+.| .++ +.++++ ++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~--~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcc--hHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 79999999999999999999999888877764321 010 0112344444 333 333432 68
Q ss_pred CEEEEcCCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHH
Q 021470 77 DVVICAISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 77 d~v~~~~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~ 141 (312)
|+|||+|+.... .+.|+..+.+++++|++.+ ++ ||+ |+ ||...... +.+..|..+|..+|..+
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~~-~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLF 147 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence 999999975332 1267888999999999988 74 665 54 55432111 33445656677799999
Q ss_pred HHHHHH----hCCCeEEEeccccccccccc--CCCCC-----ccCCCCCeeEEe-CCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 142 RKAIED----AGIPFTYVSANCFAGYFLGG--LCQPG-----SILPSKDSVVLL-GDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 142 e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~-~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
|+++++ .+++++++||+.++|..... ..... .....++...++ ++++..++++|++|+++++..+++.
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence 988875 48899999999998864321 11000 011233333333 5566789999999999999998876
Q ss_pred CccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 210 PRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+. +++||+++ ++.+|+.|+++.+.+.+|.
T Consensus 228 ~~--~~~yni~~-~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 228 GV--SGIFNCGT-GRAESFQAVADAVLAYHKK 256 (308)
T ss_pred CC--CCeEEcCC-CCceeHHHHHHHHHHHhCC
Confidence 53 56888864 5589999999999999985
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-24 Score=192.67 Aligned_cols=239 Identities=15% Similarity=0.158 Sum_probs=169.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChH-HHH--H-----hhh-----------hccCCCeEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIE-KVQ--M-----LLS-----------FKEQGAKLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-~~~--~-----~~~-----------l~~~~~~~v~ 60 (312)
.++|+|||||||+|+++++.|++.+ .+|+++.|......+. +.. . ++. ....+++++.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 4789999999999999999999865 4789999976543221 111 0 100 0125789999
Q ss_pred ccCC-------CHHHHHHHhccCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcc
Q 021470 61 GSFN-------DYQSLVNAVKLVDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPA 122 (312)
Q Consensus 61 ~D~~-------d~~~l~~~~~~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~ 122 (312)
+|+. +.+.+.++++++|+|||+|+..... ..|+.++.+++++|++.+.++++|+ | +||....
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~ 170 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG 170 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence 9998 4556778888999999999976532 2789999999999998643888886 3 2443211
Q ss_pred cc-cc-----------------------------------------------------cCCCCCchhhhHHHHHHHHHH-
Q 021470 123 KM-AN-----------------------------------------------------AMEPGRVTFDDKMVVRKAIED- 147 (312)
Q Consensus 123 ~~-~~-----------------------------------------------------~~~p~~~~~~~K~~~e~~~~~- 147 (312)
.. +. ...+.++|..+|..+|.++.+
T Consensus 171 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~ 250 (491)
T PLN02996 171 LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF 250 (491)
T ss_pred eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh
Confidence 00 00 011235577799999999986
Q ss_pred -hCCCeEEEecccccccccccCCCCC--------c-c-CCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC--c-cC
Q 021470 148 -AGIPFTYVSANCFAGYFLGGLCQPG--------S-I-LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP--R-TL 213 (312)
Q Consensus 148 -~~~~~~i~r~~~~~~~~~~~~~~~~--------~-~-~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~--~-~~ 213 (312)
.+++++++||+.++|..-..+.... + . ...+....++++++..+++++++|++++++.++... . ..
T Consensus 251 ~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~ 330 (491)
T PLN02996 251 KENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGS 330 (491)
T ss_pred cCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCC
Confidence 4799999999999986543322110 0 0 122334457788999999999999999999988653 1 23
Q ss_pred CceEEecCC-CCcCCHHHHHHHHHHHhCC
Q 021470 214 NRTMYLRPP-KNILSQREVVETWEKLIGK 241 (312)
Q Consensus 214 ~~~~~~~~~-~~~~s~~e~~~~~~~~~g~ 241 (312)
+.+||++++ .+++|+.|+++.+.+..+.
T Consensus 331 ~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 331 EIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 567888633 1689999999999988774
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=184.30 Aligned_cols=227 Identities=17% Similarity=0.184 Sum_probs=159.4
Q ss_pred EEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCCEEE
Q 021470 6 VLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVDVVI 80 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d~v~ 80 (312)
||||||||+||+++++.|+++|+ +|.++.|..... +. . ......+..|+.+.+.++.+.+ ++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~---~~---~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH---KF---L---NLADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch---hh---h---hhhheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 69999999999999999999997 788887753221 11 1 1122456788888887777653 799999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc--ccc-CCCCCchhhhHHHHHHHH
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM--ANA-MEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~--~~~-~~p~~~~~~~K~~~e~~~ 145 (312)
|+++..... ..|+.++.+++++|++.+ + ++|+ |+ |+...... +.+ ..|...|..+|..+|.++
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~ 149 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYV 149 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHH
Confidence 999864321 267889999999999988 6 5665 54 44322111 222 235556666999999988
Q ss_pred HH------hCCCeEEEecccccccccccCCCC-------CccCCCCCeeEEe------CCCCcceeeeeHHHHHHHHHHH
Q 021470 146 ED------AGIPFTYVSANCFAGYFLGGLCQP-------GSILPSKDSVVLL------GDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 146 ~~------~~~~~~i~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~------~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
++ .+++++++|++.++|......... ......+..+.++ +++++.++++|++|+++++..+
T Consensus 150 ~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~ 229 (314)
T TIGR02197 150 RRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWL 229 (314)
T ss_pred HHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHH
Confidence 64 246899999999888643211000 0001223334333 4677889999999999999999
Q ss_pred hcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 207 INDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
+... .+++||+.+ ++++|+.|+++.+.+.+|.+.++.
T Consensus 230 ~~~~--~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 266 (314)
T TIGR02197 230 LENG--VSGIFNLGT-GRARSFNDLADAVFKALGKDEKIE 266 (314)
T ss_pred Hhcc--cCceEEcCC-CCCccHHHHHHHHHHHhCCCCcce
Confidence 9872 467888865 459999999999999999775433
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-24 Score=182.20 Aligned_cols=228 Identities=15% Similarity=0.143 Sum_probs=157.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+||||||+||+++++.|+++|++|++++|+.... .....+..+. ..+++++++|++|.+++.+++.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~--~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET--EIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh--hHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 46899999999999999999999999999999963221 1111122221 2468899999999999999999999999
Q ss_pred EcCCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CCCCC---C-c--cc--c--cccCC-C------CCch
Q 021470 81 CAISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT---D-P--AK--M--ANAME-P------GRVT 134 (312)
Q Consensus 81 ~~~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~---~-~--~~--~--~~~~~-p------~~~~ 134 (312)
|+++.... ...|+.++.+++++|.+...++++|+ |+.+. . . .. . ++... + ...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y 163 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWH 163 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHH
Confidence 98754432 13788999999999988633888886 44211 1 0 00 0 11111 1 0134
Q ss_pred hhhHHHHHHHHH----HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 135 FDDKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 135 ~~~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
..+|..+|+++. ..+++++++||+.++|+........ ..+ .....+ +...++||++|+|++++.+++.+
T Consensus 164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~----~~~-~~~~~~--~~~~~~v~V~Dva~a~~~al~~~ 236 (297)
T PLN02583 164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY----LKG-AAQMYE--NGVLVTVDVNFLVDAHIRAFEDV 236 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhh----hcC-CcccCc--ccCcceEEHHHHHHHHHHHhcCc
Confidence 449999999884 3589999999999998754321111 111 112222 23467999999999999999987
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
...+ .|.+. +++...+.++++++.+.+..
T Consensus 237 ~~~~-r~~~~-~~~~~~~~~~~~~~~~~~p~ 265 (297)
T PLN02583 237 SSYG-RYLCF-NHIVNTEEDAVKLAQMLSPL 265 (297)
T ss_pred ccCC-cEEEe-cCCCccHHHHHHHHHHhCCC
Confidence 6554 55554 34344568899999987763
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=170.91 Aligned_cols=232 Identities=19% Similarity=0.219 Sum_probs=175.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+||||.||||+||++.|..+||+|++++---... |...........++.+.-|+..+ ++..+|.|||+
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~---k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhL 98 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR---KENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHL 98 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc---hhhcchhccCcceeEEEeechhH-----HHHHhhhhhhh
Confidence 36899999999999999999999999999997664433 22233445567888888888665 67789999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc--------cccCCCCCchhhhHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM--------ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~--------~~~~~p~~~~~~~K~~ 140 (312)
|++.+.. ..|+.++.+.+-.|++.+ +||++ | .||.+...+ ..|..|...|...|..
T Consensus 99 Aapasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~ 176 (350)
T KOG1429|consen 99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRV 176 (350)
T ss_pred ccCCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHH
Confidence 9987642 278999999999999988 66665 4 377643321 2344454455559999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccCCCCC-----ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG-----SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+|.++.. .|+++.|.|+-..+|+......... .....+.++.++++|.+.++|+++.|+.+.++.+.+++.
T Consensus 177 aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~ 256 (350)
T KOG1429|consen 177 AETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY 256 (350)
T ss_pred HHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC
Confidence 9998865 5789999998777776443211100 112567899999999999999999999999999999885
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeec
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
. +.+|+..|+ .+|+.|+++++.+..|.+..++.
T Consensus 257 ~--~pvNiGnp~-e~Tm~elAemv~~~~~~~s~i~~ 289 (350)
T KOG1429|consen 257 R--GPVNIGNPG-EFTMLELAEMVKELIGPVSEIEF 289 (350)
T ss_pred c--CCcccCCcc-ceeHHHHHHHHHHHcCCCcceee
Confidence 3 347886665 99999999999999876544443
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-24 Score=183.26 Aligned_cols=231 Identities=19% Similarity=0.208 Sum_probs=158.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh-ccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.|+||||||+||||++++++|+++|++|++++|+. .+.+. ...+ ...+++++.+|+.|.+.+.++++++|+||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP-----AKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 47999999999999999999999999999999873 33221 1122 12468899999999999999999999999
Q ss_pred EcCCCCccc------c------ch-----hHhHHHHHHHHHHhCCCceeec-CC---CCCCcc-----cc--c---ccC-
Q 021470 81 CAISGVHIR------S------HQ-----ILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA-----KM--A---NAM- 128 (312)
Q Consensus 81 ~~~~~~~~~------~------~~-----~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~-----~~--~---~~~- 128 (312)
|+++..... + .| +.++.+++++|++++.+++||+ |+ ||.... .. + .|.
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID 164 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence 999864321 0 22 4678999999988754788886 43 442110 00 1 111
Q ss_pred ------CCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCcc----CCCCCe--eEEeC---CCCc
Q 021470 129 ------EPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGSI----LPSKDS--VVLLG---DGNP 189 (312)
Q Consensus 129 ------~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~---~~~~ 189 (312)
.+..+|..+|..+|.++.. .+++++++||+.++|+........... ...+.. ....+ ....
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 244 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMG 244 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccC
Confidence 1223566699999988754 589999999999998754321111000 001111 11111 1112
Q ss_pred ceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 190 KAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 190 ~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
.++|+|++|+|++++.++..+.. ++.|+. +++.+|+.|+++.+.+.++.
T Consensus 245 ~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~--~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 245 SIALVHIEDICDAHIFLMEQTKA-EGRYIC--CVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred ceeEEeHHHHHHHHHHHHhCCCc-CccEEe--cCCCCCHHHHHHHHHHhCCC
Confidence 46999999999999999987543 345643 34589999999999999873
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=188.21 Aligned_cols=250 Identities=19% Similarity=0.225 Sum_probs=171.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCC-hHHHH-Hhhhh-------ccCCCeEEEccCCC------HH
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVD-IEKVQ-MLLSF-------KEQGAKLVSGSFND------YQ 67 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~-~~~~l-------~~~~~~~v~~D~~d------~~ 67 (312)
+|+|||||||+|+++++.|+++| .+|++++|+.+... .++.. .+... ...+++++.+|+.+ .+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 67999999754210 00111 00110 01578999999875 45
Q ss_pred HHHHHhccCCEEEEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcc------ccccc-----C
Q 021470 68 SLVNAVKLVDVVICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPA------KMANA-----M 128 (312)
Q Consensus 68 ~l~~~~~~~d~v~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~------~~~~~-----~ 128 (312)
.+..+.+++|+|||+++.... ...|+.++.+++++|.+.+ ++++++ |+.+.... ..+.+ .
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~ 159 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP 159 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccccc
Confidence 677777899999999986542 1378899999999999988 887776 54332111 00111 1
Q ss_pred CCCCchhhhHHHHHHHHHH---hCCCeEEEecccccccccccCCCC-Ccc--CCC-CCeeEEeCCCC-cceeeeeHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED---AGIPFTYVSANCFAGYFLGGLCQP-GSI--LPS-KDSVVLLGDGN-PKAIYVDEDDIA 200 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~-~~~--~~~-~~~~~~~~~~~-~~~~~v~~~D~a 200 (312)
.+...|..+|+.+|.+++. .+++++++||+.++|......... ... ... ......++... ...++++++|++
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva 239 (367)
T TIGR01746 160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVA 239 (367)
T ss_pred ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHH
Confidence 1234566699999998875 389999999999998522111000 000 000 00011122223 356899999999
Q ss_pred HHHHHHhcCCccC--CceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHh
Q 021470 201 MYTMKAINDPRTL--NRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 201 ~~~~~~l~~~~~~--~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 259 (312)
++++.++.++... +++|+++++ +.+|++|+++.+.+ +|.+++ .++.++|...+..
T Consensus 240 ~ai~~~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~--~~~~~~w~~~~~~ 296 (367)
T TIGR01746 240 RAIVALSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLK--LVSFDEWLQRLED 296 (367)
T ss_pred HHHHHHHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCC--cCCHHHHHHHHHH
Confidence 9999998876532 678999865 49999999999999 888765 6888888887765
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6e-24 Score=178.27 Aligned_cols=243 Identities=19% Similarity=0.210 Sum_probs=174.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+.+++||||+||+|++++++|++++ .+|++++..+... ..+.+. ..+....++.+++|+.|...+..+++++ .|+
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~-~~~~e~-~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS-NLPAEL-TGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc-ccchhh-hcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 6789999999999999999999998 8999998875422 111111 1113678999999999999999999999 777
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CCCCC-----C---ccc-ccccCCCCCchhhhHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT-----D---PAK-MANAMEPGRVTFDDKMV 140 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~-----~---~~~-~~~~~~p~~~~~~~K~~ 140 (312)
|+++.... ..+|+.++.+++++|.+.+ ++++|+ |+.+. + .++ .+.|......|..+|..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~ 159 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL 159 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence 76664331 1389999999999999999 999998 54221 1 111 01222222466669999
Q ss_pred HHHHHHHhC----CCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh-----cCC
Q 021470 141 VRKAIEDAG----IPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI-----NDP 210 (312)
Q Consensus 141 ~e~~~~~~~----~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l-----~~~ 210 (312)
+|+++++.+ +..+++||..+||+.-..+..... ....+......++++...++++++.++.+.+.+. ..+
T Consensus 160 aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~ 239 (361)
T KOG1430|consen 160 AEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSP 239 (361)
T ss_pred HHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCC
Confidence 999998754 668999999999875443332211 1134455556677778889999998887766654 234
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcce-eecCCH
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQ-KSSISK 250 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~-~~~~~~ 250 (312)
...|+.|+++ ++.++..-+++..+.+.+|...+ ....|.
T Consensus 240 ~~~Gq~yfI~-d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~ 279 (361)
T KOG1430|consen 240 SVNGQFYFIT-DDTPVRFFDFLSPLVKALGYCLPSSIKLPL 279 (361)
T ss_pred ccCceEEEEe-CCCcchhhHHHHHHHHhcCCCCCceeecch
Confidence 4567888887 55688777888899999998766 343443
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-24 Score=171.32 Aligned_cols=244 Identities=21% Similarity=0.224 Sum_probs=178.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
.++||||||+||||+|.+-+|+++|+.|.+++.-.... .+.....+.+.. .++.++++|++|.+.++++|+ ++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~-~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY-LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc-hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 36899999999999999999999999999997654443 333333344434 789999999999999999998 7899
Q ss_pred EEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeecC----CCCCCcccc---cccCC-CCCchhhhHHH
Q 021470 79 VICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLPS----EFGTDPAKM---ANAME-PGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~S----~~g~~~~~~---~~~~~-p~~~~~~~K~~ 140 (312)
|+|+++.... ...|+.++.++++++++++ ++.+|+| .||.+..-+ +.+.. |.++|..+|..
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~ 159 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKA 159 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHH
Confidence 9999997653 2378999999999999999 9999984 366543322 34444 77888889999
Q ss_pred HHHHHHH----hCCCeEEEeccccccc--c---------c-ccCC----CCCccC-----CCCCeeEEeCCCCcceeeee
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGY--F---------L-GGLC----QPGSIL-----PSKDSVVLLGDGNPKAIYVD 195 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~--~---------~-~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~~v~ 195 (312)
+|+++.. .++.++.+|.....+. + + .++. +..+.. ..++... ..+|+..+++++
T Consensus 160 iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~-t~dgt~vrdyi~ 238 (343)
T KOG1371|consen 160 IEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYT-TIDGTIVRDYIH 238 (343)
T ss_pred HHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccc-ccCCCeeeccee
Confidence 9999986 3456677774433331 0 0 1111 100000 0111122 224688899999
Q ss_pred HHHHHHHHHHHhcCCcc--CCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 196 EDDIAMYTMKAINDPRT--LNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
+-|.|+....++..... .-++||+ |.+...+..+++..+++.+|+++++..++.
T Consensus 239 v~Dla~~h~~al~k~~~~~~~~i~Nl-gtg~g~~V~~lv~a~~k~~g~~~k~~~v~~ 294 (343)
T KOG1371|consen 239 VLDLADGHVAALGKLRGAAEFGVYNL-GTGKGSSVLELVTAFEKALGVKIKKKVVPR 294 (343)
T ss_pred eEehHHHHHHHhhccccchheeeEee-cCCCCccHHHHHHHHHHHhcCCCCccccCC
Confidence 99999999999987542 2347777 567789999999999999999988776663
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-23 Score=173.10 Aligned_cols=216 Identities=23% Similarity=0.308 Sum_probs=152.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC-HHHHHHHh-ccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND-YQSLVNAV-KLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~l~~~~-~~~d~v~ 80 (312)
+|+|+||||||++|+.++++|+++|++|++++|+ +++...... ...+++++++|+.| .+.+.+.+ .++|+||
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD-----VDKAKTSLP-QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC-----HHHHHHhcc-cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 5799999999999999999999999999999998 444321111 13468999999988 57787888 6899999
Q ss_pred EcCCCCcc------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCC-------CCchhhhHHHHHHHHH
Q 021470 81 CAISGVHI------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEP-------GRVTFDDKMVVRKAIE 146 (312)
Q Consensus 81 ~~~~~~~~------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p-------~~~~~~~K~~~e~~~~ 146 (312)
++++.... ...|..+..++++++++.+ ++++|+ |+.+........+..+ ...++..|..+|++++
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~ 169 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR 169 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99876421 1356677899999999988 899887 5543211110111111 1112346888899999
Q ss_pred HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCC--C
Q 021470 147 DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPK--N 224 (312)
Q Consensus 147 ~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~--~ 224 (312)
+.+++++++||+++++.... +.............+++.+|+|++++.++..+...+.++.+++.. .
T Consensus 170 ~~gi~~~iirpg~~~~~~~~------------~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (251)
T PLN00141 170 KSGINYTIVRPGGLTNDPPT------------GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAP 237 (251)
T ss_pred hcCCcEEEEECCCccCCCCC------------ceEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCC
Confidence 99999999999988764211 111111111112357999999999999999887667778887522 2
Q ss_pred cCCHHHHHHHHHH
Q 021470 225 ILSQREVVETWEK 237 (312)
Q Consensus 225 ~~s~~e~~~~~~~ 237 (312)
..++++++..+++
T Consensus 238 ~~~~~~~~~~~~~ 250 (251)
T PLN00141 238 KRSYKDLFASIKQ 250 (251)
T ss_pred chhHHHHHHHhhc
Confidence 4789998887764
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=174.81 Aligned_cols=231 Identities=18% Similarity=0.273 Sum_probs=180.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
++++||||.||||++.++.+..+- ++.+.+..-.-.++ .+.++ ....++..++++|+.+...+.-.+. .+|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~---~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN---LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc---cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 689999999999999999999874 55555543322221 11222 2336789999999999998888886 6999
Q ss_pred EEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc----cccCCCCCchhhhHHH
Q 021470 79 VICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM----ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~----~~~~~p~~~~~~~K~~ 140 (312)
|+|+|+.... ...|+..+..|+++++.+|++++||+ | .||...+.. .+.+.|.++|..+|++
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaA 163 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAA 163 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHH
Confidence 9999997652 23788899999999999987999997 3 577543322 4567788999999999
Q ss_pred HHHHHHH----hCCCeEEEeccccccccc------ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFL------GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
+|..+++ ++++++++|.+.+||+-. +.|+.. ...+++.++.++|-+.++|+|++|+++++..+++.+
T Consensus 164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l---~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg 240 (331)
T KOG0747|consen 164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKL---AMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG 240 (331)
T ss_pred HHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHH---HHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC
Confidence 9999986 689999999988888632 222221 134677888999999999999999999999999885
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
. .|++||+. ..+..+..|+++.+.+...+.
T Consensus 241 ~-~geIYNIg-td~e~~~~~l~k~i~eli~~~ 270 (331)
T KOG0747|consen 241 E-LGEIYNIG-TDDEMRVIDLAKDICELFEKR 270 (331)
T ss_pred C-ccceeecc-CcchhhHHHHHHHHHHHHHHh
Confidence 4 68899985 667999999999999888764
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=182.54 Aligned_cols=214 Identities=17% Similarity=0.139 Sum_probs=156.2
Q ss_pred EEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEEcCC
Q 021470 7 LIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVICAIS 84 (312)
Q Consensus 7 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~~~~ 84 (312)
||||||||||++|++.|++.|++|+++.+. ..+|+.|.+++.++++ ++|+|||+|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~ 58 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKEKPTYVILAAA 58 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhccCCCEEEEeee
Confidence 699999999999999999999988866443 1489999999999887 5799999997
Q ss_pred CCcc-----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cc----cCCCCCc-hhhhHHHH
Q 021470 85 GVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---AN----AMEPGRV-TFDDKMVV 141 (312)
Q Consensus 85 ~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~----~~~p~~~-~~~~K~~~ 141 (312)
.... ...|+.++.+++++|++++ ++++|+ |+ ||.....+ ++ +..|... |..+|..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 59 KVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred eecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHH
Confidence 5321 1267888999999999998 888886 43 44321111 11 3334344 55599999
Q ss_pred HHHHH----HhCCCeEEEecccccccccccC------CCCCc-----cCCCCCeeEE-eCCCCcceeeeeHHHHHHHHHH
Q 021470 142 RKAIE----DAGIPFTYVSANCFAGYFLGGL------CQPGS-----ILPSKDSVVL-LGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 142 e~~~~----~~~~~~~i~r~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~-~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|++++ ..+++++++||+.++|...... ....+ ....+.+..+ ++++++.++++|++|+++++..
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~ 217 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence 87664 4689999999999988753210 00000 0012334444 6778888999999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCccee
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQK 245 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~ 245 (312)
+++... .++.||+. +++.+|+.|+++.+.+.+|.+..+
T Consensus 218 ~~~~~~-~~~~~ni~-~~~~~s~~e~~~~i~~~~~~~~~~ 255 (306)
T PLN02725 218 LMRRYS-GAEHVNVG-SGDEVTIKELAELVKEVVGFEGEL 255 (306)
T ss_pred HHhccc-cCcceEeC-CCCcccHHHHHHHHHHHhCCCCce
Confidence 998754 34567775 456999999999999999976544
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=169.94 Aligned_cols=239 Identities=21% Similarity=0.225 Sum_probs=189.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccC-CCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ-GAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+-|+|||||+|+.++++|.+.|.+|++-.|.+... +-+. +-+.+. -+-+...|+.|+++++++++..++|||+.
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~-~r~l---kvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD-PRHL---KVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccc-hhhe---eecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 356999999999999999999999999999986554 3222 222222 36677889999999999999999999999
Q ss_pred CCCc------cccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEe
Q 021470 84 SGVH------IRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156 (312)
Q Consensus 84 ~~~~------~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r 156 (312)
|... +.++|+...+.++..|++.| |.+||. |..|..... .+.+..+|...|..+++.=.+.||+|
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~s-------~Sr~LrsK~~gE~aVrdafPeAtIir 210 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVKS-------PSRMLRSKAAGEEAVRDAFPEATIIR 210 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccccC-------hHHHHHhhhhhHHHHHhhCCcceeec
Confidence 9754 34689999999999999999 999997 888854322 35677799999999999878899999
Q ss_pred ccccccc---ccccCCCCCccCCCCCeeEEeCCCC-cceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHH
Q 021470 157 ANCFAGY---FLGGLCQPGSILPSKDSVVLLGDGN-PKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVV 232 (312)
Q Consensus 157 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~ 232 (312)
|+.++|. |++++... ...-+.+++++.|. +.-..|++.|+|.+|+.++++|+..|++|...||+ .+++.|++
T Consensus 211 Pa~iyG~eDrfln~ya~~---~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~-~yql~eLv 286 (391)
T KOG2865|consen 211 PADIYGTEDRFLNYYASF---WRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD-RYQLSELV 286 (391)
T ss_pred hhhhcccchhHHHHHHHH---HHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc-hhhHHHHH
Confidence 9999985 44433221 12244566666653 44577999999999999999999999999999987 99999999
Q ss_pred HHHHHHhCCcceeecCCHHHHHHHHHh
Q 021470 233 ETWEKLIGKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 233 ~~~~~~~g~~~~~~~~~~~~~~~~~~~ 259 (312)
+.+-+...+-..+...+..-+......
T Consensus 287 d~my~~~~~~~ry~r~~mP~f~a~a~~ 313 (391)
T KOG2865|consen 287 DIMYDMAREWPRYVRLPMPIFKAMAAA 313 (391)
T ss_pred HHHHHHHhhccccccCCcHHHHHHHhh
Confidence 999998887667777666655555444
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=165.97 Aligned_cols=230 Identities=17% Similarity=0.198 Sum_probs=155.7
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEEEcCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVICAIS 84 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~~~~~ 84 (312)
|+||||||+||++|+..|.+.||+|++++|+..... ......+. ..+.+..... ++|+|||+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~--------~~~~~~v~-------~~~~~~~~~~~~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS--------QNLHPNVT-------LWEGLADALTLGIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh--------hhcCcccc-------ccchhhhcccCCCCEEEECCC
Confidence 689999999999999999999999999999954321 00011111 2234444444 7999999999
Q ss_pred CCcccc------------chhHhHHHHHHHHHHhCC-Cceeec-CC---CCCCcccc-cccCCCCCchhh-hHHHHHHHH
Q 021470 85 GVHIRS------------HQILLQLKLVDAIKEAGN-VKRFLP-SE---FGTDPAKM-ANAMEPGRVTFD-DKMVVRKAI 145 (312)
Q Consensus 85 ~~~~~~------------~~~~~~~~l~~aa~~~~~-v~~~v~-S~---~g~~~~~~-~~~~~p~~~~~~-~K~~~e~~~ 145 (312)
..-... ..+..+..++++..+... .+.+|. |. ||...+.. ++...+...+.. .-...|+..
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a 145 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEA 145 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHH
Confidence 754321 446678889988885432 456665 43 55544332 222233333333 333345444
Q ss_pred H---HhCCCeEEEecccccccc---cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021470 146 E---DAGIPFTYVSANCFAGYF---LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYL 219 (312)
Q Consensus 146 ~---~~~~~~~i~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~ 219 (312)
. ..|.+++++|.|.+.++- ++.+.... ..-.+ -.+|+|.++++|||++|+++++..+++++.. .+.||+
T Consensus 146 ~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~f-k~glG---G~~GsGrQ~~SWIhieD~v~~I~fll~~~~l-sGp~N~ 220 (297)
T COG1090 146 LQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLF-KLGLG---GKLGSGRQWFSWIHIEDLVNAILFLLENEQL-SGPFNL 220 (297)
T ss_pred hhhhhcCceEEEEEEEEEecCCCcchhhhcchh-hhccC---CccCCCCceeeeeeHHHHHHHHHHHHhCcCC-CCcccc
Confidence 3 358899999999998753 33222211 00111 2378999999999999999999999999874 457899
Q ss_pred cCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHH
Q 021470 220 RPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASM 257 (312)
Q Consensus 220 ~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~ 257 (312)
++|. +++.+|++..+.+.+++|. +..+|..-+...+
T Consensus 221 taP~-PV~~~~F~~al~r~l~RP~-~~~vP~~~~rl~L 256 (297)
T COG1090 221 TAPN-PVRNKEFAHALGRALHRPA-ILPVPSFALRLLL 256 (297)
T ss_pred cCCC-cCcHHHHHHHHHHHhCCCc-cccCcHHHHHHHh
Confidence 9887 9999999999999999874 5567765444443
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-23 Score=176.64 Aligned_cols=230 Identities=20% Similarity=0.214 Sum_probs=153.5
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
|||||||||||+++++.|+++|++|++++|+..... .+.... ..|... +.+.+.+.++|+|||+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGA--------NTKWEG----YKPWAP-LAESEALEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCC--------ccccee----eecccc-cchhhhcCCCCEEEECCCC
Confidence 689999999999999999999999999999854321 000111 112222 4456677899999999986
Q ss_pred Ccc---c---------cchhHhHHHHHHHHHHhCCCc--eeec-CC---CCCCcccc---cccCCCCCchhh-hHHHHHH
Q 021470 86 VHI---R---------SHQILLQLKLVDAIKEAGNVK--RFLP-SE---FGTDPAKM---ANAMEPGRVTFD-DKMVVRK 143 (312)
Q Consensus 86 ~~~---~---------~~~~~~~~~l~~aa~~~~~v~--~~v~-S~---~g~~~~~~---~~~~~p~~~~~~-~K~~~e~ 143 (312)
... . ..|+..+++++++|++++ ++ ++|+ |+ ||...... +.+..+ ..++. .+...|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~-~~~~~~~~~~~e~ 145 (292)
T TIGR01777 68 PIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPAG-DDFLAELCRDWEE 145 (292)
T ss_pred CcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCCC-CChHHHHHHHHHH
Confidence 431 1 257888999999999998 63 4554 33 44322111 221222 23333 4444555
Q ss_pred HHH---HhCCCeEEEecccccccccccCCCCC--ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021470 144 AIE---DAGIPFTYVSANCFAGYFLGGLCQPG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 144 ~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
.+. +.+++++++||+.++|+......... ...... ..+++++..++++|++|+|+++..+++++.. +++|+
T Consensus 146 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~ 221 (292)
T TIGR01777 146 AAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLG---GPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVN 221 (292)
T ss_pred HhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcc---cccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceE
Confidence 433 45799999999999986321110000 000111 1256778899999999999999999988653 46888
Q ss_pred ecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHH
Q 021470 219 LRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLAS 256 (312)
Q Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 256 (312)
+.++ +.+|+.|+++.+++.+|.+.. ..+|...+...
T Consensus 222 ~~~~-~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~ 257 (292)
T TIGR01777 222 ATAP-EPVRNKEFAKALARALHRPAF-FPVPAFVLRAL 257 (292)
T ss_pred ecCC-CccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHH
Confidence 8754 599999999999999998754 45777655443
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.6e-23 Score=172.89 Aligned_cols=210 Identities=16% Similarity=0.138 Sum_probs=143.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.|+||||||+||||++|++.|+++|++|+...+ |+.|.+.+...++ ++|+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------------~~~~~~~v~~~l~~~~~D~Vi 62 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------------RLENRASLEADIDAVKPTHVF 62 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------------ccCCHHHHHHHHHhcCCCEEE
Confidence 479999999999999999999999999975422 2334455555555 789999
Q ss_pred EcCCCCccc-------------cchhHhHHHHHHHHHHhCCCceeecCC---CCCCc------c---cccccC-CCCCch
Q 021470 81 CAISGVHIR-------------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGTDP------A---KMANAM-EPGRVT 134 (312)
Q Consensus 81 ~~~~~~~~~-------------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~~------~---~~~~~~-~p~~~~ 134 (312)
|+|+..... ..|+.++.+++++|++.+ ++++++|+ |+... . ..+++. .|.+.|
T Consensus 63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Y 141 (298)
T PLN02778 63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFY 141 (298)
T ss_pred ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCch
Confidence 999875311 268889999999999999 88877742 43211 0 102222 233566
Q ss_pred hhhHHHHHHHHHHhCCCeEEEecccccccc--c-ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 135 FDDKMVVRKAIEDAGIPFTYVSANCFAGYF--L-GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 135 ~~~K~~~e~~~~~~~~~~~i~r~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..+|..+|.+++.+. +..++|+....+.. . ..+.. ....+..+...+ .++++++|+++++..++..+.
T Consensus 142 g~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~---~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~ 212 (298)
T PLN02778 142 SKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFIT---KITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL 212 (298)
T ss_pred HHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHH---HHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC
Confidence 679999999998764 56677876533321 1 11111 112223333322 279999999999999987653
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHH
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKE 251 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 251 (312)
+++||+. +++.+|+.|+++.+++.+|...++..+..+
T Consensus 213 --~g~yNig-s~~~iS~~el~~~i~~~~~~~~~~~~~~i~ 249 (298)
T PLN02778 213 --TGIYNFT-NPGVVSHNEILEMYRDYIDPSFTWKNFTLE 249 (298)
T ss_pred --CCeEEeC-CCCcccHHHHHHHHHHHhCCCceeccccHH
Confidence 4689985 455999999999999999976554444443
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=169.41 Aligned_cols=234 Identities=25% Similarity=0.318 Sum_probs=177.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+||||||++|++++++|+++|++|++.+|+ +++... +. .++++..+|+.+++.+..+++|+|.++++.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~-----~~~~~~---~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~ 71 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRN-----PEAAAA---LA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLIS 71 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeC-----HHHHHh---hc-CCcEEEEeccCCHhHHHHHhccccEEEEEe
Confidence 589999999999999999999999999999999 666633 33 899999999999999999999999999998
Q ss_pred CCCcccc--chhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccc
Q 021470 84 SGVHIRS--HQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANC 159 (312)
Q Consensus 84 ~~~~~~~--~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~ 159 (312)
+... .+ .......++++++++.+ .+++++. |.++..... ...+..+|..+|+.+.+.+++++++|+..
T Consensus 72 ~~~~-~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~-------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~ 143 (275)
T COG0702 72 GLLD-GSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS-------PSALARAKAAVEAALRSSGIPYTTLRRAA 143 (275)
T ss_pred cccc-cccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC-------ccHHHHHHHHHHHHHHhcCCCeEEEecCe
Confidence 8654 11 22334445555555533 2677775 677765432 35677799999999999999999999666
Q ss_pred ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHh
Q 021470 160 FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 239 (312)
++.+....+... ......+....+..+.++++.+|++.++...+..+...+++|.+.|+. ..+..|+++.+.+..
T Consensus 144 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~-~~~~~~~~~~l~~~~ 218 (275)
T COG0702 144 FYLGAGAAFIEA----AEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPE-ALTLAELASGLDYTI 218 (275)
T ss_pred eeeccchhHHHH----HHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCc-eecHHHHHHHHHHHh
Confidence 665443322111 111222222223337899999999999999999887788999999874 999999999999999
Q ss_pred CCcceeecCCHHHHHHHHHh
Q 021470 240 GKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 240 g~~~~~~~~~~~~~~~~~~~ 259 (312)
|++..+...+..........
T Consensus 219 gr~~~~~~~~~~~~~~~~~~ 238 (275)
T COG0702 219 GRPVGLIPEALAALTLALSG 238 (275)
T ss_pred CCcceeeCCcHHHHHHHhcc
Confidence 99998866666655554443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-22 Score=176.03 Aligned_cols=221 Identities=19% Similarity=0.204 Sum_probs=153.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-----------cCCCeEEEccCCCHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-----------EQGAKLVSGSFNDYQSLV 70 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-----------~~~~~~v~~D~~d~~~l~ 70 (312)
.++|+||||+|+||++++++|++.|++|++++|+ .++.+.+ ..+. ..+++++.+|+.|.+++.
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn-----~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~ 154 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-----AQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG 154 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence 4689999999999999999999999999999998 4444321 1111 135789999999999999
Q ss_pred HHhccCCEEEEcCCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc-cccCCCCCchhhhHHH
Q 021470 71 NAVKLVDVVICAISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM-ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~-~~~~~p~~~~~~~K~~ 140 (312)
+++.++|+|||+++.... ...|..++.+++++|++.+ +++||+ |+.+...... .........++..|..
T Consensus 155 ~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kra 233 (576)
T PLN03209 155 PALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRK 233 (576)
T ss_pred HHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHHHH
Confidence 999999999999986531 1256788999999999998 999987 6665421110 1111112345558899
Q ss_pred HHHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-cCCceEEe
Q 021470 141 VRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-TLNRTMYL 219 (312)
Q Consensus 141 ~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~~ 219 (312)
+|+++...|++|++||||.+.+...... ....+............+..+|+|++++.++.++. ..+.++.+
T Consensus 234 aE~~L~~sGIrvTIVRPG~L~tp~d~~~--------~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvev 305 (576)
T PLN03209 234 AEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEV 305 (576)
T ss_pred HHHHHHHcCCCEEEEECCeecCCccccc--------cccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEE
Confidence 9999999999999999998754311110 01111111111111235889999999999999764 56788888
Q ss_pred cCCCCcCCHHHHHHHHHHH
Q 021470 220 RPPKNILSQREVVETWEKL 238 (312)
Q Consensus 220 ~~~~~~~s~~e~~~~~~~~ 238 (312)
.+.. ......+.+.+..+
T Consensus 306 i~~~-~~p~~~~~~~~~~i 323 (576)
T PLN03209 306 IAET-TAPLTPMEELLAKI 323 (576)
T ss_pred EeCC-CCCCCCHHHHHHhc
Confidence 7433 33445555555443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-23 Score=169.46 Aligned_cols=217 Identities=19% Similarity=0.268 Sum_probs=150.1
Q ss_pred EEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHH-HHhhhh----ccCCCe----EEEccCCCHHHHHHHhc-
Q 021470 6 VLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKV-QMLLSF----KEQGAK----LVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~~l----~~~~~~----~v~~D~~d~~~l~~~~~- 74 (312)
||||||+|.||+.|+++|++.+ .++++++|+ ..+. .....+ ...++. .+.+|+.|.+.+..+++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~-----E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~ 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRD-----ENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES------HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCC-----hhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh
Confidence 7999999999999999999998 789999998 3333 222333 233454 45899999999999999
Q ss_pred -cCCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHH
Q 021470 75 -LVDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVR 142 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e 142 (312)
++|+|||+|+.-+.+ ..|+.+++|++++|.+++ +++||+ |+ +....|.+-++.+|+.+|
T Consensus 76 ~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~IST--------DKAv~PtnvmGatKrlaE 146 (293)
T PF02719_consen 76 YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFIST--------DKAVNPTNVMGATKRLAE 146 (293)
T ss_dssp -T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEE--------CGCSS--SHHHHHHHHHH
T ss_pred cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccc--------cccCCCCcHHHHHHHHHH
Confidence 899999999986532 289999999999999999 999997 54 444566788888999999
Q ss_pred HHHHHh-------CCCeEEEecccccccc---cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 143 KAIEDA-------GIPFTYVSANCFAGYF---LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 143 ~~~~~~-------~~~~~i~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
+++... +..++++|.|.+.+.- ++.|... ...++++.+. +++..+-++++++.++.++.++...+
T Consensus 147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Q---i~~g~PlTvT-~p~mtRffmti~EAv~Lvl~a~~~~~- 221 (293)
T PF02719_consen 147 KLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQ---IKNGGPLTVT-DPDMTRFFMTIEEAVQLVLQAAALAK- 221 (293)
T ss_dssp HHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHH---HHTTSSEEEC-ETT-EEEEE-HHHHHHHHHHHHHH---
T ss_pred HHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHH---HHcCCcceeC-CCCcEEEEecHHHHHHHHHHHHhhCC-
Confidence 999863 2467889988887642 2222221 1345666654 45778899999999999999987764
Q ss_pred CCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 213 LNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
.|.+ ++.-.++++++.|+++.+.+..|..
T Consensus 222 ~gei-fvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 222 GGEI-FVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp TTEE-EEE---TCEECCCHHHHHHHHTT-E
T ss_pred CCcE-EEecCCCCcCHHHHHHHHHhhcccc
Confidence 3444 4444667999999999999999854
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=171.64 Aligned_cols=222 Identities=18% Similarity=0.245 Sum_probs=173.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhc----cCCCeEEEccCCCHHHHHHHhcc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFK----EQGAKLVSGSFNDYQSLVNAVKL-- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~l~~~~~~-- 75 (312)
.++|+||||+|.||+.+++++++.+ .+++.++|+.... -....++. .....++.||+.|.+.+..++++
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~----~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL----YLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHH----HHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 5799999999999999999999988 7899999984332 11223333 36788999999999999999997
Q ss_pred CCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHH
Q 021470 76 VDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 76 ~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~ 144 (312)
+|+|||+|+.-+.+ .+|+.+++|+++||.++| |++||. |+ +...+|.+-++.+|..+|.+
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iST--------DKAV~PtNvmGaTKr~aE~~ 396 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLIST--------DKAVNPTNVMGATKRLAEKL 396 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEec--------CcccCCchHhhHHHHHHHHH
Confidence 99999999976632 289999999999999999 999997 65 55667778899999999999
Q ss_pred HHHh-------CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceE
Q 021470 145 IEDA-------GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217 (312)
Q Consensus 145 ~~~~-------~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~ 217 (312)
+.+. +..++.+|.|.+.|.--+-..-+.....++++++ .-+++-.+-|.++.|.++.++.+....+ .|.+
T Consensus 397 ~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplT-vTdp~mtRyfMTI~EAv~LVlqA~a~~~-gGei- 473 (588)
T COG1086 397 FQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLT-VTDPDMTRFFMTIPEAVQLVLQAGAIAK-GGEI- 473 (588)
T ss_pred HHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcc-ccCCCceeEEEEHHHHHHHHHHHHhhcC-CCcE-
Confidence 8763 2568889988888753221111111124455555 4556778899999999999999988764 3444
Q ss_pred EecCCCCcCCHHHHHHHHHHHhC
Q 021470 218 YLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 218 ~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
++.-.|+++++.|+++.+.+..|
T Consensus 474 fvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 474 FVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred EEEcCCCCeEHHHHHHHHHHHhC
Confidence 55456789999999999999997
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=177.76 Aligned_cols=199 Identities=15% Similarity=0.130 Sum_probs=144.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+||||||+||||+++++.|+++|++|++++|... . ....+++++++|+.|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~-----~------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLA 68 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH-----D------ALDPRVDYVCASLRNPV-LQELAGEADAVIHLA 68 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh-----h------cccCCceEEEccCCCHH-HHHHhcCCCEEEEcC
Confidence 48999999999999999999999999999998722 1 12357899999999985 788888999999999
Q ss_pred CCCcc--ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccc
Q 021470 84 SGVHI--RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCF 160 (312)
Q Consensus 84 ~~~~~--~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~ 160 (312)
+.... ...|+.++.|++++|++.| ++ +|+ |+.. +. + ..+ ...|.++..++++++++|++.+
T Consensus 69 a~~~~~~~~vNv~Gt~nLleAA~~~G-vR-iV~~SS~~---G~---~----~~~----~~aE~ll~~~~~p~~ILR~~nV 132 (699)
T PRK12320 69 PVDTSAPGGVGITGLAHVANAAARAG-AR-LLFVSQAA---GR---P----ELY----RQAETLVSTGWAPSLVIRIAPP 132 (699)
T ss_pred ccCccchhhHHHHHHHHHHHHHHHcC-Ce-EEEEECCC---CC---C----ccc----cHHHHHHHhcCCCEEEEeCcee
Confidence 86532 2368899999999999999 74 655 5421 11 0 011 1477777778899999999999
Q ss_pred cccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 161 AGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
+|..........+...... . ..+..+.++|++|++++++.+++.+. +++||+.++ +.+|+.|+++++...
T Consensus 133 YGp~~~~~~~r~I~~~l~~----~-~~~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~-~~~Si~el~~~i~~~ 202 (699)
T PRK12320 133 VGRQLDWMVCRTVATLLRS----K-VSARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATP-DTTNVVTAWRLLRSV 202 (699)
T ss_pred cCCCCcccHhHHHHHHHHH----H-HcCCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCC-CeeEHHHHHHHHHHh
Confidence 8863321100000000000 0 11334567999999999999987653 458999755 599999999988765
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=170.42 Aligned_cols=239 Identities=18% Similarity=0.205 Sum_probs=161.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCCh-HHHH--Hh-----hhh-----------ccCCCeEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDI-EKVQ--ML-----LSF-----------KEQGAKLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~--~~-----~~l-----------~~~~~~~v~ 60 (312)
.++|+|||||||+|++|++.|++.+. +|+++.|....... ++.. .+ +.+ ...++.++.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 47999999999999999999998763 78999997543311 1110 00 000 124688999
Q ss_pred ccCCCH------HHHHHHhccCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc
Q 021470 61 GSFNDY------QSLVNAVKLVDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK 123 (312)
Q Consensus 61 ~D~~d~------~~l~~~~~~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~ 123 (312)
+|++++ +.+..+.+++|+|||+|+..... ..|+.++.+++++|++.+.+++||+ |+ +|...+.
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~ 278 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR 278 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence 999986 45666667899999999986532 2789999999999998754788876 32 3332100
Q ss_pred c-cccC-----------------------------------------------------------CC-CCchhhhHHHHH
Q 021470 124 M-ANAM-----------------------------------------------------------EP-GRVTFDDKMVVR 142 (312)
Q Consensus 124 ~-~~~~-----------------------------------------------------------~p-~~~~~~~K~~~e 142 (312)
. +.+. .+ .+.|..+|..+|
T Consensus 279 i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE 358 (605)
T PLN02503 279 IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGE 358 (605)
T ss_pred eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHH
Confidence 0 0000 01 145555999999
Q ss_pred HHHHHh--CCCeEEEeccccccc-------cccc--CCCCCccCCCCCeeE-EeCCCCcceeeeeHHHHHHHHHHHhcC-
Q 021470 143 KAIEDA--GIPFTYVSANCFAGY-------FLGG--LCQPGSILPSKDSVV-LLGDGNPKAIYVDEDDIAMYTMKAIND- 209 (312)
Q Consensus 143 ~~~~~~--~~~~~i~r~~~~~~~-------~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~D~a~~~~~~l~~- 209 (312)
.++++. ++|++|+||+.+... |.+. ...........+.+. ++++++...++|++|.++.+++.++..
T Consensus 359 ~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~ 438 (605)
T PLN02503 359 MVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKH 438 (605)
T ss_pred HHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhh
Confidence 999864 799999999998542 2222 111101111223333 667888999999999999999888432
Q ss_pred C---ccCCceEEecCC-CCcCCHHHHHHHHHHHhCC
Q 021470 210 P---RTLNRTMYLRPP-KNILSQREVVETWEKLIGK 241 (312)
Q Consensus 210 ~---~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~ 241 (312)
. ...+.+||++++ .+++++.|+.+.+.+....
T Consensus 439 ~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 439 GGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 1 123578898733 3699999999999876553
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=144.79 Aligned_cols=259 Identities=18% Similarity=0.253 Sum_probs=179.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
|++|+|+|++|.+|++|.+.+.+.|. +-.++.-+ -.+|+++.++.+++|+ +...
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~ekPth 58 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESEKPTH 58 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhccCCce
Confidence 47999999999999999999998875 33333222 0578999999999987 6889
Q ss_pred EEEcCCCCcc-----------ccchhHhHHHHHHHHHHhCCCceeec--C--CCCC------Ccccc-cccCCCCCchhh
Q 021470 79 VICAISGVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP--S--EFGT------DPAKM-ANAMEPGRVTFD 136 (312)
Q Consensus 79 v~~~~~~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~--S--~~g~------~~~~~-~~~~~p~~~~~~ 136 (312)
|||+|+.... ...|+...-|++..|.+.| ++++++ | .|.. ++... ..|+.|.+..|.
T Consensus 59 VIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYs 137 (315)
T KOG1431|consen 59 VIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYS 137 (315)
T ss_pred eeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHH
Confidence 9999986542 1267777899999999999 888775 3 2332 22211 445556666666
Q ss_pred -hHHHH----HHHHHHhCCCeEEEecccccccccc----------cCCCCCccC-C-CCCeeEEeCCCCcceeeeeHHHH
Q 021470 137 -DKMVV----RKAIEDAGIPFTYVSANCFAGYFLG----------GLCQPGSIL-P-SKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 137 -~K~~~----e~~~~~~~~~~~i~r~~~~~~~~~~----------~~~~~~~~~-~-~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
+|+.+ ..+-.++|..++.+-|..++|+--+ .++...-.. . ....+.++|+|...+.|+|++|+
T Consensus 138 yAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DL 217 (315)
T KOG1431|consen 138 YAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDL 217 (315)
T ss_pred HHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHH
Confidence 88554 3444568999999988877764211 111100000 1 22378899999999999999999
Q ss_pred HHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCc
Q 021470 200 AMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGC 279 (312)
Q Consensus 200 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (312)
|+++++++.+-.....+.--.|..+.+|++|+++.+.++.|..-+..-...+ .+|.
T Consensus 218 A~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK------------------------~DGq 273 (315)
T KOG1431|consen 218 ADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK------------------------SDGQ 273 (315)
T ss_pred HHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC------------------------CCCC
Confidence 9999999987543333322223445899999999999999987665433221 1222
Q ss_pred ccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 280 LTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
|.-..++.++..++|++++++|++.+.+.
T Consensus 274 ---~kKtasnsKL~sl~pd~~ft~l~~ai~~t 302 (315)
T KOG1431|consen 274 ---FKKTASNSKLRSLLPDFKFTPLEQAISET 302 (315)
T ss_pred ---cccccchHHHHHhCCCcccChHHHHHHHH
Confidence 33333345788899999999999998864
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=138.88 Aligned_cols=197 Identities=21% Similarity=0.286 Sum_probs=143.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||.|+||||.+|++|++..+++||+|++++|+ ++|.+. ..++.+++.|+.|++++.+.+.|.|+||...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn-----~~K~~~-----~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~ 70 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRN-----ASKLAA-----RQGVTILQKDIFDLTSLASDLAGHDAVISAF 70 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeC-----hHhccc-----cccceeecccccChhhhHhhhcCCceEEEec
Confidence 699999999999999999999999999999999 555421 2688899999999999999999999999988
Q ss_pred CCCcc--ccchhHhHHHHHHHHHHhCCCceeec----CCCCCCccc--ccccCCCCCchhh-hHHHHH--HHHHH-hCCC
Q 021470 84 SGVHI--RSHQILLQLKLVDAIKEAGNVKRFLP----SEFGTDPAK--MANAMEPGRVTFD-DKMVVR--KAIED-AGIP 151 (312)
Q Consensus 84 ~~~~~--~~~~~~~~~~l~~aa~~~~~v~~~v~----S~~g~~~~~--~~~~~~p~~~~~~-~K~~~e--~~~~~-~~~~ 151 (312)
+.... ..........++++.+.++ ++|++. +|.-.+++. .+.|..| ..|+. ++...| +.++. .+++
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP-~ey~~~A~~~ae~L~~Lr~~~~l~ 148 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFP-AEYKPEALAQAEFLDSLRAEKSLD 148 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCc-hhHHHHHHHHHHHHHHHhhccCcc
Confidence 87632 2233445777899998888 888664 232222221 2666666 45555 666665 44443 5699
Q ss_pred eEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021470 152 FTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYL 219 (312)
Q Consensus 152 ~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~ 219 (312)
||++-|..++.+. ..-.++ ...+..+..-..|+ ++|+..|.|-+++.-+++|.+.++.+.+
T Consensus 149 WTfvSPaa~f~PG-erTg~y---rlggD~ll~n~~G~---SrIS~aDYAiA~lDe~E~~~h~rqRftv 209 (211)
T COG2910 149 WTFVSPAAFFEPG-ERTGNY---RLGGDQLLVNAKGE---SRISYADYAIAVLDELEKPQHIRQRFTV 209 (211)
T ss_pred eEEeCcHHhcCCc-cccCce---EeccceEEEcCCCc---eeeeHHHHHHHHHHHHhcccccceeeee
Confidence 9999999888762 222222 12333443333333 8899999999999999999888776655
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=146.91 Aligned_cols=240 Identities=18% Similarity=0.165 Sum_probs=169.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH--HHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV--QMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
+++.||||-||+-|+.|++.|+++|++|+++.|++++.+..+. .....+...+++++.+|++|...+.++++ .+|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 4789999999999999999999999999999998776655432 11122334568899999999999999998 6899
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCC-ceeec-CC---CCCCcccc---cccCCCCCchhhhHHH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNV-KRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v-~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
|||+++..... +.+..++.++++|.+..+.. .+|+. |+ ||.....+ .+|..|.+||..+|..
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY 161 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 161 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence 99999986632 25677899999999998721 24443 32 66543322 7788898888889977
Q ss_pred HHHHHH----HhCCCeEEEeccccc--------ccccccCCCCCc--cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 141 VRKAIE----DAGIPFTYVSANCFA--------GYFLGGLCQPGS--ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 141 ~e~~~~----~~~~~~~i~r~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+--... ++|+-.+ .|..+ ..|....+.... ...........|+-+.+++|-+..|.++++...
T Consensus 162 a~W~tvNYResYgl~Ac---nGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm 238 (345)
T COG1089 162 AYWITVNYRESYGLFAC---NGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM 238 (345)
T ss_pred HHheeeehHhhcCceee---cceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence 654443 3443221 11111 111111110000 001223455678889999999999999999999
Q ss_pred hcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecC
Q 021470 207 INDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSI 248 (312)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 248 (312)
|.+++ +..|.+ +.++..|.+|+++...+..|.+++++.-
T Consensus 239 LQq~~--PddyVi-ATg~t~sVrefv~~Af~~~g~~l~w~g~ 277 (345)
T COG1089 239 LQQEE--PDDYVI-ATGETHSVREFVELAFEMVGIDLEWEGT 277 (345)
T ss_pred HccCC--CCceEE-ecCceeeHHHHHHHHHHHcCceEEEeec
Confidence 98875 334555 4678999999999999999998887643
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.5e-20 Score=170.71 Aligned_cols=213 Identities=18% Similarity=0.170 Sum_probs=144.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.|+||||||+||||++|++.|.++|++|... .+|++|.+.+.+.+. ++|+||
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~--------------------------~~~l~d~~~v~~~i~~~~pd~Vi 433 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG--------------------------KGRLEDRSSLLADIRNVKPTHVF 433 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee--------------------------ccccccHHHHHHHHHhhCCCEEE
Confidence 5799999999999999999999999887411 134667777877776 799999
Q ss_pred EcCCCCc---c-c---------cchhHhHHHHHHHHHHhCCCceeecCC---CCCC-----c-c---cccccCCC-CCch
Q 021470 81 CAISGVH---I-R---------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGTD-----P-A---KMANAMEP-GRVT 134 (312)
Q Consensus 81 ~~~~~~~---~-~---------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~-----~-~---~~~~~~~p-~~~~ 134 (312)
|+|+... . . ..|+.++.+++++|++.+ ++.+++|+ |+.. . . ..+++..| .+.|
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Y 512 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFY 512 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChh
Confidence 9998753 1 1 278999999999999999 88777643 3321 0 0 11223333 3567
Q ss_pred hhhHHHHHHHHHHhCCCeEEEecccccccc---cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 135 FDDKMVVRKAIEDAGIPFTYVSANCFAGYF---LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 135 ~~~K~~~e~~~~~~~~~~~i~r~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..+|..+|++++.+ .++.++|+.+.++.. ..++..... .....+.+ + .+..+++|++.++..+++.+
T Consensus 513 g~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~--~~~~~~~v-p-----~~~~~~~~~~~~~~~l~~~~- 582 (668)
T PLN02260 513 SKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKIS--RYNKVVNI-P-----NSMTVLDELLPISIEMAKRN- 582 (668)
T ss_pred hHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHh--ccceeecc-C-----CCceehhhHHHHHHHHHHhC-
Confidence 77999999999876 356666766555321 111111110 11111222 1 24567888888888887643
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHH
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFL 254 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 254 (312)
.+++||+++++ .+|+.|+++.+.+.++....+.+++.+++.
T Consensus 583 -~~giyni~~~~-~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~ 623 (668)
T PLN02260 583 -LRGIWNFTNPG-VVSHNEILEMYKDYIDPGFKWSNFTLEEQA 623 (668)
T ss_pred -CCceEEecCCC-cCcHHHHHHHHHHhcCCcccccccCHHHhh
Confidence 25799998665 999999999999988533335667776643
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-19 Score=152.75 Aligned_cols=225 Identities=18% Similarity=0.184 Sum_probs=148.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|+ ++++||||+|+||+++++.|+++|++|+++.|+ +++.+.+......++.++++|++|.+++.++++
T Consensus 1 m~-k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (276)
T PRK06482 1 MS-KTWFITGASSGFGRGMTERLLARGDRVAATVRR-----PDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAAL 74 (276)
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 53 789999999999999999999999999999998 544433322224578899999999998887764
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+.++.++++++ ++.+ ..++|+ |+.+.... ..+...|
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~Y 148 (276)
T PRK06482 75 GRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIA-----YPGFSLY 148 (276)
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccC-----CCCCchh
Confidence 479999999865421 15788888888887 5555 677776 65543211 1223455
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCC-e---e-EEeCCCCcceeeeeHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKD-S---V-VLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~v~~~D~a~~ 202 (312)
..+|..++.+++. .+++++++|||.+..++............... . + .....+. ...+.+++|++++
T Consensus 149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~a 227 (276)
T PRK06482 149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS-FAIPGDPQKMVQA 227 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc-CCCCCCHHHHHHH
Confidence 5599998877653 48899999999875443221111000000000 0 0 0001111 1224689999999
Q ss_pred HHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 203 TMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 203 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
++.++..+.. +..|++ |.++..+..|+++.+.+.++
T Consensus 228 ~~~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 228 MIASADQTPA-PRRLTL-GSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHcCCCC-CeEEec-ChHHHHHHHHHHHHHHHHHH
Confidence 9999986643 345555 56667788877777766654
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.5e-21 Score=157.28 Aligned_cols=195 Identities=20% Similarity=0.243 Sum_probs=110.8
Q ss_pred EEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCC-hHHHH-Hh------hh---hccCCCeEEEccCCCH------HH
Q 021470 8 IIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVD-IEKVQ-ML------LS---FKEQGAKLVSGSFNDY------QS 68 (312)
Q Consensus 8 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~-~~------~~---l~~~~~~~v~~D~~d~------~~ 68 (312)
|||||||+|++|+++|++++. +|+++.|..+... .++.. .+ .. ....+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 9999999854310 11110 00 01 1257899999999864 67
Q ss_pred HHHHhccCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CCC---CCCcc---------cc---c
Q 021470 69 LVNAVKLVDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SEF---GTDPA---------KM---A 125 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~---g~~~~---------~~---~ 125 (312)
+..+.+.+|+|||+++..+.. ..|+.+++++++.|.+.+ .++|++ |+. +.... .. .
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccch
Confidence 777778999999999987642 379999999999999766 567776 431 11110 00 1
Q ss_pred ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCc-------cCCCCCeeE-EeCCCCcceee
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGS-------ILPSKDSVV-LLGDGNPKAIY 193 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~ 193 (312)
......++|..+|+.+|+++++ .|++++|+||+.+.|........... .....+.++ ..++.+..+++
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 239 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL 239 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence 1222245677799999999985 38999999999999843222111100 001112222 34445567999
Q ss_pred eeHHHHHHHH
Q 021470 194 VDEDDIAMYT 203 (312)
Q Consensus 194 v~~~D~a~~~ 203 (312)
+++|.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9e-20 Score=153.06 Aligned_cols=226 Identities=16% Similarity=0.150 Sum_probs=146.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|++++|+||||+|+||++++++|+++|++|++++|+ +++...........+..+++|++|++++.++++
T Consensus 1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARD-----TATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 777899999999999999999999999999999998 444332222224467889999999988877665
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+..+..+++++ ++.+ .+++|+ |+.+..... .....|
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y 149 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAF-----PMSGIY 149 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCC-----CCccHH
Confidence 579999999975421 15666665555554 5555 667775 543322211 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-EEeCCCCcceee-eeHHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-VLLGDGNPKAIY-VDEDDIAMYTMK 205 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-v~~~D~a~~~~~ 205 (312)
..+|..++.+.+. .|++++++|||.+..................... ...........+ ++++|++++++.
T Consensus 150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 5599987766542 5899999999988765442111100000000000 001111122345 889999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
+++.+...+. +++.+....+++.++.+.+.+.
T Consensus 230 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 230 LVDAENPPLR-LFLGSGVLDLAKADYERRLATW 261 (275)
T ss_pred HHcCCCCCeE-EEeCchHHHHHHHHHHHHHHHH
Confidence 9998765544 4443233478889988888874
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.7e-19 Score=177.11 Aligned_cols=251 Identities=16% Similarity=0.144 Sum_probs=169.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhh---------ccCCCeEEEccCC-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSF---------KEQGAKLVSGSFN----- 64 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l---------~~~~~~~v~~D~~----- 64 (312)
.++|+|||||||+|+++++.|++++ ++|+++.|..... .........+ ...+++++.+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE-AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH-HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 3689999999999999999999887 7999999974432 1111110100 0236899999996
Q ss_pred -CHHHHHHHhccCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCc-----------
Q 021470 65 -DYQSLVNAVKLVDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDP----------- 121 (312)
Q Consensus 65 -d~~~l~~~~~~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~----------- 121 (312)
+.+.+.++..++|+|||+++..... ..|+.++.+++++|.+.+ +++|++ |+ ++...
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~ 1128 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQA 1128 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhc
Confidence 4567777778999999999976531 268999999999999888 888886 44 32100
Q ss_pred ---ccc-c-----ccCCCCCchhhhHHHHHHHHHH---hCCCeEEEecccccccccccCCCCC-c--cCCC-CCeeEEeC
Q 021470 122 ---AKM-A-----NAMEPGRVTFDDKMVVRKAIED---AGIPFTYVSANCFAGYFLGGLCQPG-S--ILPS-KDSVVLLG 185 (312)
Q Consensus 122 ---~~~-~-----~~~~p~~~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~-~--~~~~-~~~~~~~~ 185 (312)
... + .+..+..+|..+|+.+|.++.. .+++++++||+.++|.......... . .... ......++
T Consensus 1129 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p 1208 (1389)
T TIGR03443 1129 GGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIP 1208 (1389)
T ss_pred cCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcC
Confidence 000 0 0111234577799999999875 4899999999999886432211100 0 0000 00122233
Q ss_pred CCCcceeeeeHHHHHHHHHHHhcCCcc--CCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHh
Q 021470 186 DGNPKAIYVDEDDIAMYTMKAINDPRT--LNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 186 ~~~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 259 (312)
+....+++++++|++++++.++..+.. .+.+||+.+ +..+++.++++.+.+. |.++ ..++.++|...+..
T Consensus 1209 ~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~l~~~-g~~~--~~~~~~~w~~~l~~ 1280 (1389)
T TIGR03443 1209 NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG-HPRIRFNDFLGTLKTY-GYDV--EIVDYVHWRKSLER 1280 (1389)
T ss_pred CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC-CCCCcHHHHHHHHHHh-CCCC--CccCHHHHHHHHHH
Confidence 445568999999999999999876532 335788864 4489999999999764 6654 44677777776543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=143.97 Aligned_cols=204 Identities=14% Similarity=0.106 Sum_probs=135.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
++++|+||||||++|+++++.|+++|++|+++.|+.... .++ ....+ ...++.++.+|+.|++++.++++
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA-AEE--LVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH-HHH--HHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999998888774321 111 11111 23568899999999998888765
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++...... .|+....++++++ ++.+ .+++|+ |+.+..... .+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~-----~~~~~ 155 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW-----PGRSN 155 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC-----CCchH
Confidence 5799999998543211 4555566666665 4556 778886 554432211 12234
Q ss_pred hhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+++ ..+++++++|||.+.++......... .... . . ......+++.+|+++++..+
T Consensus 156 y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~~-~--~--~~~~~~~~~~~dva~~~~~~ 227 (249)
T PRK12825 156 YAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA---REAK-D--A--ETPLGRSGTPEDIARAVAFL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh---HHhh-h--c--cCCCCCCcCHHHHHHHHHHH
Confidence 5558887766654 25899999999999987654332211 0000 0 0 11122488999999999999
Q ss_pred hcCCc--cCCceEEecCC
Q 021470 207 INDPR--TLNRTMYLRPP 222 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~~ 222 (312)
+.++. ..|+.|+++|.
T Consensus 228 ~~~~~~~~~g~~~~i~~g 245 (249)
T PRK12825 228 CSDASDYITGQVIEVTGG 245 (249)
T ss_pred hCccccCcCCCEEEeCCC
Confidence 97653 35778888743
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=143.69 Aligned_cols=207 Identities=8% Similarity=0.029 Sum_probs=135.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|+++.|+. ++.+ ..+.+. ...+.++++|++|.+.+.++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQ-----DGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh-----HHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999983 2221 112222 2346779999999998887765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHH-HHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILL----QLKLVDAI-KEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa-~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+.. +.++++++ +..+ .+++|+ |+...... ..+..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~-----~~~~~ 155 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEA-----SPLKS 155 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCC-----CCCCc
Confidence 389999999875321 145555 66677777 5555 788886 55332211 12223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCC--C--CCeeEEeCCCCcceeeeeHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILP--S--KDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.|..+|..++.+++. .+++++++||+.+.+.............. . .....++..+.....+++++|+++
T Consensus 156 ~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 235 (262)
T PRK13394 156 AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ 235 (262)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 566699888776652 47889999999888765432111000000 0 000011222344568999999999
Q ss_pred HHHHHhcCCcc--CCceEEec
Q 021470 202 YTMKAINDPRT--LNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~~--~~~~~~~~ 220 (312)
++..++..+.. .++.|++.
T Consensus 236 a~~~l~~~~~~~~~g~~~~~~ 256 (262)
T PRK13394 236 TVLFLSSFPSAALTGQSFVVS 256 (262)
T ss_pred HHHHHcCccccCCcCCEEeeC
Confidence 99999976532 25556664
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-18 Score=141.22 Aligned_cols=207 Identities=11% Similarity=0.041 Sum_probs=134.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..++++||||+|++|++++++|+++|++|++++|+ +++.+.. ..+. ..+++++.+|+.|++++.++++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 77 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLN-----DEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVE 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998 3333221 2222 3467889999999998888775
Q ss_pred ---cCCEEEEcCCCCcccc--------------chhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIRS--------------HQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~~--------------~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++...... .|+.. .++++.++++.+ .++||+ |+...... ..+..
T Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~-----~~~~~ 151 (258)
T PRK12429 78 TFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVG-----SAGKA 151 (258)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccC-----CCCcc
Confidence 5899999998643211 34454 555666666667 788886 44322211 12234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-----EEeCCCCcceeeeeHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-----VLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~D~a 200 (312)
.|..+|..++.+.+. .++.++.++|+.+.++........... ..+... ..+........+++++|+|
T Consensus 152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 230 (258)
T PRK12429 152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAK-ERGISEEEVLEDVLLPLVPQKRFTTVEEIA 230 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhcc-ccCCChHHHHHHHHhccCCccccCCHHHHH
Confidence 455588877755542 468889999999887654322111000 000000 0111222335799999999
Q ss_pred HHHHHHhcCCc--cCCceEEec
Q 021470 201 MYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~ 220 (312)
+++..++..+. ..++.|.+.
T Consensus 231 ~~~~~l~~~~~~~~~g~~~~~~ 252 (258)
T PRK12429 231 DYALFLASFAAKGVTGQAWVVD 252 (258)
T ss_pred HHHHHHcCccccCccCCeEEeC
Confidence 99999987643 235666664
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=142.49 Aligned_cols=160 Identities=18% Similarity=0.241 Sum_probs=120.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCC-hHHHHH-------hhhhccCCCeEEEccCC------CHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVD-IEKVQM-------LLSFKEQGAKLVSGSFN------DYQS 68 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~~~~~-------~~~l~~~~~~~v~~D~~------d~~~ 68 (312)
++|++||||||+|++++..|+.+-. +|+|++|-.+... .+|.+. ++++...+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999998874 9999999865320 112211 12244678999999997 4578
Q ss_pred HHHHhccCCEEEEcCCCCc-------cccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc---------------c
Q 021470 69 LVNAVKLVDVVICAISGVH-------IRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM---------------A 125 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~-------~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~---------------~ 125 (312)
+.++.+.+|.|||+++..+ ....|+.++..+++.|...+ .|.+++ |+.+...... .
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccccccccc
Confidence 8888889999999999765 24589999999999999887 787776 4432211100 1
Q ss_pred ccCCCCCchhhhHHHHHHHHHH---hCCCeEEEecccccccc
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED---AGIPFTYVSANCFAGYF 164 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~ 164 (312)
....+..+|..+|+.+|.++++ .|++++|+|||.+.+..
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 1222356788899999999985 58999999999998753
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=141.12 Aligned_cols=212 Identities=16% Similarity=0.119 Sum_probs=137.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... .++ ....+. ..++.++++|++|++++.++++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~-~~~--~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR-ANK--VVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh-HHH--HHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999874211 111 112222 2457889999999998887765
Q ss_pred -cCCEEEEcCCCCcc--------ccchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhHHHHHH
Q 021470 75 -LVDVVICAISGVHI--------RSHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 75 -~~d~v~~~~~~~~~--------~~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~ 143 (312)
++|+|||+++.... ...|+..+.++++++.+.- ...++|+ |+.+........+.....+|..+|..+|.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~ 162 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGED 162 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHH
Confidence 58999999975421 1368888999999998652 0235664 55332211100111112355569999998
Q ss_pred HHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCce
Q 021470 144 AIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216 (312)
Q Consensus 144 ~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~ 216 (312)
+++. .++++++++|+.+.+++...+.... .. ... .........+++++|+|++++.+++.+...+++
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~-~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~ 236 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL---NP-GAI--EARREAAGKLYTVSEFAAEVARAVTAPVPSGHI 236 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC---CH-HHH--HHHHhhhcccCCHHHHHHHHHHHhhccccCccE
Confidence 8765 4677888888877665433211100 00 000 000001136899999999999999876556778
Q ss_pred EEecCCC
Q 021470 217 MYLRPPK 223 (312)
Q Consensus 217 ~~~~~~~ 223 (312)
+++.|+.
T Consensus 237 ~~i~~~~ 243 (248)
T PRK07806 237 EYVGGAD 243 (248)
T ss_pred EEecCcc
Confidence 8886543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.1e-18 Score=141.05 Aligned_cols=208 Identities=15% Similarity=0.104 Sum_probs=133.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+++++||||+|+||+++++.|+++|++|++++|+ +++...+......++..+++|+.|++++.++++ +
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS-----EAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC-----HHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999998 544433333223468889999999998888776 4
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|+|||+++..... ..|+.++.++++++. +.+ ..++|+ |+.+.... ..+...|..
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~-----~~~~~~Y~~ 152 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLIT-----MPGIGYYCG 152 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCC-----CCCcchhHH
Confidence 79999999975421 266777778887753 344 567775 55432211 122345555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCC-e-eEEeC---CCCcceeeeeHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKD-S-VVLLG---DGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~v~~~D~a~~~~ 204 (312)
+|..++.+.+. .++++++++||.+..++............... . ..... .......+.+++|+|++++
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 232 (277)
T PRK06180 153 SKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAIL 232 (277)
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 99988776653 48999999999987654322111000000000 0 00000 0001124568999999999
Q ss_pred HHhcCCccCCceEEecCCC
Q 021470 205 KAINDPRTLNRTMYLRPPK 223 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~ 223 (312)
.+++.+... ..++.|+.
T Consensus 233 ~~l~~~~~~--~~~~~g~~ 249 (277)
T PRK06180 233 AAVESDEPP--LHLLLGSD 249 (277)
T ss_pred HHHcCCCCC--eeEeccHH
Confidence 999877533 23454444
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=140.36 Aligned_cols=223 Identities=12% Similarity=0.111 Sum_probs=143.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc----cCCCeEEEccCCCHHHHHHHhc--
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK----EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
..++++||||+|+||+++++.|+++|++|++++|+ +++.+ ..+.+. ..++.++.+|+.|++++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN-----PDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 34899999999999999999999999999999997 33322 112222 2467889999999998888776
Q ss_pred -----cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhC---CCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAG---NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~---~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . ..|+....++++++.+.. ...++++ |+..... +..+
T Consensus 81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-----~~~~ 155 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-----THRW 155 (276)
T ss_pred HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-----CCCC
Confidence 68999999985321 0 145666667776665432 0346665 4433211 1122
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+++. .++++++++||.+...+....... ...............+++++|+++++
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~ 229 (276)
T PRK05875 156 FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES------PELSADYRACTPLPRVGEVEDVANLA 229 (276)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC------HHHHHHHHcCCCCCCCcCHHHHHHHH
Confidence 34566699999888864 368889999998765543221110 00000000011123467899999999
Q ss_pred HHHhcCCccC--CceEEecCCCCcC----CHHHHHHHHHHHhCC
Q 021470 204 MKAINDPRTL--NRTMYLRPPKNIL----SQREVVETWEKLIGK 241 (312)
Q Consensus 204 ~~~l~~~~~~--~~~~~~~~~~~~~----s~~e~~~~~~~~~g~ 241 (312)
..++..+... ++.+++.+ +..+ +..|+++.+.+..|.
T Consensus 230 ~~l~~~~~~~~~g~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 230 MFLLSDAASWITGQVINVDG-GHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HHHcCchhcCcCCCEEEECC-CeeccCCccHHHHHHHHhhHHHH
Confidence 9999876433 67788864 4454 677777766655443
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=140.36 Aligned_cols=195 Identities=16% Similarity=0.138 Sum_probs=129.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|.+++++||||+|+||++++++|+++|++|++++|+ +++.+ .+...+++++++|++|++++.++++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARR-----VDKME---DLASLGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 667899999999999999999999999999999998 54442 2334578999999999999888776
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC-c
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR-V 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~-~ 133 (312)
++|++||+++..... +.|+.+ ++.++..+++.+ ..++|+ |+.+..... |.. .
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------~~~~~ 145 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT------PLGAW 145 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC------CCccH
Confidence 689999999865421 134444 566666777776 667775 554322111 122 3
Q ss_pred hhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeE--------EeCCCCcceeeeeHHH
Q 021470 134 TFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV--------LLGDGNPKAIYVDEDD 198 (312)
Q Consensus 134 ~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~~~D 198 (312)
|..+|..++.+.+ ..++++++++||.+..++.................. .+........+.+.+|
T Consensus 146 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (273)
T PRK06182 146 YHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV 225 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence 4459999887643 358999999999987664321111000000000000 0001111235678999
Q ss_pred HHHHHHHHhcCC
Q 021470 199 IAMYTMKAINDP 210 (312)
Q Consensus 199 ~a~~~~~~l~~~ 210 (312)
+|++++.++...
T Consensus 226 vA~~i~~~~~~~ 237 (273)
T PRK06182 226 IADAISKAVTAR 237 (273)
T ss_pred HHHHHHHHHhCC
Confidence 999999998864
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=139.17 Aligned_cols=216 Identities=16% Similarity=0.117 Sum_probs=142.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+...+++++++|+.|.+++.++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID-----AAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999998 444322 223334568899999999999887775
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|+|||+++..... ..|+....++++++ .+.+ ..++++ |+....... ....|.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------~~~~y~ 149 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL------GHPAYS 149 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC------CCcccH
Confidence 489999999864321 14555555666655 3444 566765 442211111 112455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-EEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-VLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+|..++.+++. .++++..++||.+.+........ ..... ..........++++++|+++++..++
T Consensus 150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 223 (257)
T PRK07074 150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA------ANPQVFEELKKWYPLQDFATPDDVANAVLFLA 223 (257)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc------cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 599988777654 36888999999887654221100 00000 00001123357899999999999999
Q ss_pred cCC-cc-CCceEEecCCCCcCCHHHHHHHHHH
Q 021470 208 NDP-RT-LNRTMYLRPPKNILSQREVVETWEK 237 (312)
Q Consensus 208 ~~~-~~-~~~~~~~~~~~~~~s~~e~~~~~~~ 237 (312)
..+ .. .|..+++. ++...+..|+.+.+.+
T Consensus 224 ~~~~~~~~g~~~~~~-~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 224 SPAARAITGVCLPVD-GGLTAGNREMARTLTL 254 (257)
T ss_pred CchhcCcCCcEEEeC-CCcCcCChhhhhhhcc
Confidence 753 22 35555665 5668889999988764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=138.32 Aligned_cols=207 Identities=12% Similarity=0.106 Sum_probs=131.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhc--cCCCeEEEccCCCHHHHHHHh------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFK--EQGAKLVSGSFNDYQSLVNAV------ 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~--~~~~~~v~~D~~d~~~l~~~~------ 73 (312)
++++|||||+|++|+++++.|+++|++|++++|+ +++.+.+. .+. ..++.++++|+.|++++.+++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLG-----EAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999998 43332222 222 346888999999998665544
Q ss_pred -ccCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 74 -KLVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 74 -~~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
.++|+|||+++..... ..|+.+...+++++ ++.+ ++++|+ |+....... .....
T Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-----~~~~~ 149 (255)
T TIGR01963 76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVAS-----PFKSA 149 (255)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCC-----CCCch
Confidence 3689999999864321 13555555555555 5566 778776 442221111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC--CCCCee--EEeCCCCcceeeeeHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL--PSKDSV--VLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~v~~~D~a~~ 202 (312)
|..+|..++.+.+. .+++++++||+.++++............ ...... .....+....++++++|+|++
T Consensus 150 y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 229 (255)
T TIGR01963 150 YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAET 229 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHH
Confidence 55588877766643 3788999999998876432211100000 000000 011123345679999999999
Q ss_pred HHHHhcCCc--cCCceEEec
Q 021470 203 TMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~ 220 (312)
++.++..+. ..++.|++.
T Consensus 230 ~~~~~~~~~~~~~g~~~~~~ 249 (255)
T TIGR01963 230 ALFLASDAAAGITGQAIVLD 249 (255)
T ss_pred HHHHcCccccCccceEEEEc
Confidence 999998642 235566664
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=140.53 Aligned_cols=213 Identities=13% Similarity=0.087 Sum_probs=134.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhc----cCCCeEEEccCCCHHHHHHHhc-
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFK----EQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~----~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
|++++++||||+|++|+++++.|+++|++|++++|+ +++.+... ... ..+++++.+|++|++++.+ ++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~ 74 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN-----PEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQL 74 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHH
Confidence 677889999999999999999999999999999998 33332221 111 2468899999999988765 32
Q ss_pred ------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCC
Q 021470 75 ------LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|+|||+++..... ..|+.+..++++++ ++.+ ..++|+ |+.+...+. .
T Consensus 75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~ 148 (280)
T PRK06914 75 VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGF-----P 148 (280)
T ss_pred HHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCC-----C
Confidence 579999999864421 14566666666664 5555 667775 543322111 2
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCC-CeeE-----EeCC-CCcceeeee
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSK-DSVV-----LLGD-GNPKAIYVD 195 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~-~~~~~~~v~ 195 (312)
+...|..+|..++.+++. .+++++++|||.+..+............... .... +... ......+++
T Consensus 149 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (280)
T PRK06914 149 GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGN 228 (280)
T ss_pred CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCC
Confidence 234555699998877653 4799999999998876433211110000000 0000 0000 011235689
Q ss_pred HHHHHHHHHHHhcCCccCCceEEecCCCCcCC
Q 021470 196 EDDIAMYTMKAINDPRTLNRTMYLRPPKNILS 227 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s 227 (312)
++|+|++++.+++++... ..|++ +.+..++
T Consensus 229 ~~dva~~~~~~~~~~~~~-~~~~~-~~~~~~~ 258 (280)
T PRK06914 229 PIDVANLIVEIAESKRPK-LRYPI-GKGVKLM 258 (280)
T ss_pred HHHHHHHHHHHHcCCCCC-ccccc-CCchHHH
Confidence 999999999999987643 34444 3443443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=136.60 Aligned_cols=202 Identities=15% Similarity=0.078 Sum_probs=132.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|++|+++++.|+++|++|++++|+ +++.. ..+.+. ..++.++.+|+.|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC-----GDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 33322 112222 2348889999999999888875
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+....++++++. +.+ .+++|+ |+.+... .+..+...
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~----~~~~~~~~ 155 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPR----VGYPGLAH 155 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhc----cCCCCccH
Confidence 589999999875421 145556666777663 445 567775 4433220 11122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+++. .+++++++||+.+.++.......... ............+++++|+|+++..+
T Consensus 156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~dva~~~~~l 228 (251)
T PRK12826 156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW-------AEAIAAAIPLGRLGEPEDIAAAVLFL 228 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH-------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599887766653 47899999999998765432211000 00000011112578999999999998
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..+.. .|+.+++.|
T Consensus 229 ~~~~~~~~~g~~~~~~~ 245 (251)
T PRK12826 229 ASDEARYITGQTLPVDG 245 (251)
T ss_pred hCccccCcCCcEEEECC
Confidence 876532 467777763
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-17 Score=132.80 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=126.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d 77 (312)
|+||+++||||+|++|+++++.|+++ ++|++++|+ +++.+.+... ..+++++++|+.|++++.++++ ++|
T Consensus 1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id 73 (227)
T PRK08219 1 MERPTALITGASRGIGAAIARELAPT-HTLLLGGRP-----AERLDELAAE-LPGATPFPVDLTDPEAIAAAVEQLGRLD 73 (227)
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCC-----HHHHHHHHHH-hccceEEecCCCCHHHHHHHHHhcCCCC
Confidence 66789999999999999999999999 999999998 4443322211 2468899999999999999887 589
Q ss_pred EEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 78 VVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 78 ~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
+|||+++..... ..|... .+++++++++.+ .++|+ |+...... ..+...|..+|
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~-----~~~~~~y~~~K 146 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRA-----NPGWGSYAASK 146 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCc-----CCCCchHHHHH
Confidence 999999874321 123333 555666666554 45554 44222111 11224555699
Q ss_pred HHHHHHHHH-----hC-CCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 139 MVVRKAIED-----AG-IPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 139 ~~~e~~~~~-----~~-~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
..++.+++. .+ +++..++||.+..+....... ..+. ......+++++|++++++.+++++.
T Consensus 147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-----~~~~-------~~~~~~~~~~~dva~~~~~~l~~~~- 213 (227)
T PRK08219 147 FALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVA-----QEGG-------EYDPERYLRPETVAKAVRFAVDAPP- 213 (227)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhh-----hhcc-------ccCCCCCCCHHHHHHHHHHHHcCCC-
Confidence 888776653 24 788888888655432221111 0000 0112357999999999999998764
Q ss_pred CCceEEe
Q 021470 213 LNRTMYL 219 (312)
Q Consensus 213 ~~~~~~~ 219 (312)
.+.++++
T Consensus 214 ~~~~~~~ 220 (227)
T PRK08219 214 DAHITEV 220 (227)
T ss_pred CCccceE
Confidence 3344444
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-16 Score=134.34 Aligned_cols=227 Identities=15% Similarity=0.114 Sum_probs=144.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++++||||||.||+++++.|+++|++|++.+|+ +++.+.. +.+ ..++++.+|++|++++.++++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLD-----EALAKETAAEL--GLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh--ccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 35799999999999999999999999999999998 5554322 222 258889999999988776654
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+.+... ++..+.+.+ ..++|. |+.+.... ......|
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y 150 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIP-----VPGMATY 150 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCC-----CCCCcch
Confidence 579999999865321 145554444 444445556 567775 55433211 1122345
Q ss_pred hhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+ ..|+++++++|+++...+..... ......+++.+|+|++++.++
T Consensus 151 ~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~~~~~va~~~~~~l 213 (273)
T PRK07825 151 CASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-----------------GAKGFKNVEPEDVAAAIVGTV 213 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-----------------cccCCCCCCHHHHHHHHHHHH
Confidence 569987665433 35899999999987654332110 011235789999999999999
Q ss_pred cCCccCCceEEecCC---CCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHH
Q 021470 208 NDPRTLNRTMYLRPP---KNILSQREVVETWEKLIGKTLQKSSISKEEFLASMK 258 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~---~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 258 (312)
.+++.........+. -..+....+.+.+.+..|....+...+.++..+.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (273)
T PRK07825 214 AKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYER 267 (273)
T ss_pred hCCCCEEeccHHHHHHHHHHHhCcHHHHHHHHHHhcccceeechhhHHHHHHHh
Confidence 876431100000000 013334566777777777766666666665544443
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-16 Score=131.69 Aligned_cols=192 Identities=17% Similarity=0.084 Sum_probs=130.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+. ++. +....+...+++.+.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGA-----APLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh-----HhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 36999999999999999999999999999999973 222 12233445678899999999988887765
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|+|||+++..... ..|.....++++++. +.+ ++++|+ |+.+..... .+...|.
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~y~ 155 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG-----PGMGAYA 155 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC-----CCcchhH
Confidence 589999999864311 144555666666654 445 778776 554332111 1223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|...+.+++. .++++..+|||.+.++...... . ......+++.+|+|+++..++.
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~---------------~-~~~~~~~~~~~dva~~~~~~l~ 219 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM---------------P-DADFSRWVTPEQIAAVIAFLLS 219 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC---------------C-chhhhcCCCHHHHHHHHHHHhC
Confidence 588876666542 4788999999988765221100 0 0111247899999999999998
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
++. ..++.+.+.|
T Consensus 220 ~~~~~~~g~~~~~~g 234 (239)
T PRK12828 220 DEAQAITGASIPVDG 234 (239)
T ss_pred cccccccceEEEecC
Confidence 653 2356666654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-17 Score=136.51 Aligned_cols=209 Identities=12% Similarity=0.067 Sum_probs=136.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||.++++.|+++|++|++++|+ .++.+.........+.++++|++|++++.++++ +
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIK-----PARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 443322222113468889999999988888775 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC----CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG----NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~----~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+....++++++.... .-.++|+ |+...... ..+...|..
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~ 155 (257)
T PRK07067 81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-----EALVSHYCA 155 (257)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-----CCCCchhhh
Confidence 79999999864311 167777888888876432 0134554 54332211 123345666
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC---ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG---SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+. .+++++.++||.+.+.......... ...........+........+++++|+|+++..+
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 235 (257)
T PRK07067 156 TKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFL 235 (257)
T ss_pred hHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence 99988777653 5788999999998776433211100 0000000111122233345788999999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+++++.|
T Consensus 236 ~s~~~~~~~g~~~~v~g 252 (257)
T PRK07067 236 ASADADYIVAQTYNVDG 252 (257)
T ss_pred hCcccccccCcEEeecC
Confidence 98653 2467788764
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-17 Score=134.92 Aligned_cols=200 Identities=12% Similarity=0.084 Sum_probs=130.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++|+||||+|++|.++++.|+++|++|++++|+ +++.+. ...+. ...+.++.+|+.|++++.++++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSN-----EEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 333221 12222 3457888999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+....++++++. +.+ ++++|+ |+.+.... ..+...
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~-----~~~~~~ 153 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTG-----NPGQTN 153 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccC-----CCCCcH
Confidence 359999999875421 145566677777764 455 678875 54332211 122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|...+.+.+. .++.++++||+.+.++......... ... ....-....+++.+|+++++..+
T Consensus 154 y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~dva~~~~~~ 225 (246)
T PRK05653 154 YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEV---KAE-----ILKEIPLGRLGQPEEVANAVAFL 225 (246)
T ss_pred hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHH---HHH-----HHhcCCCCCCcCHHHHHHHHHHH
Confidence 55588776655443 4788999999998776443211100 000 00001124578899999999999
Q ss_pred hcCC--ccCCceEEecC
Q 021470 207 INDP--RTLNRTMYLRP 221 (312)
Q Consensus 207 l~~~--~~~~~~~~~~~ 221 (312)
+... ...+..+++.|
T Consensus 226 ~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 226 ASDAASYITGQVIPVNG 242 (246)
T ss_pred cCchhcCccCCEEEeCC
Confidence 8753 23466777754
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-17 Score=134.88 Aligned_cols=206 Identities=13% Similarity=0.099 Sum_probs=129.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
++|+||||+|++|++++++|+++|++|++++|+...........+.......+.++.+|++|.+++.++++ ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRL 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999998732210000111111223458899999999999888776 47
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCchhhhHH
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
|+|||+++..... ..|+.++.++++++...- .-..++. ++... ..+..|...|..+|.
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHA-----ERPLKGYPVYCAAKA 161 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhh-----cCCCCCchhHHHHHH
Confidence 9999999853210 167888899999886421 0123433 32211 223344456666999
Q ss_pred HHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-c
Q 021470 140 VVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-T 212 (312)
Q Consensus 140 ~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~ 212 (312)
.+|.+++. .+++++++||+.+.+........... .... . .......+.+++|+++++..++.... .
T Consensus 162 ~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~----~~~~--~-~~~~~~~~~~~~d~a~~~~~~~~~~~~~ 234 (249)
T PRK09135 162 ALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEA----RQAI--L-ARTPLKRIGTPEDIAEAVRFLLADASFI 234 (249)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHH----HHHH--H-hcCCcCCCcCHHHHHHHHHHHcCccccc
Confidence 99988864 25788999999887654321100000 0000 0 00011123358999999977765432 3
Q ss_pred CCceEEecC
Q 021470 213 LNRTMYLRP 221 (312)
Q Consensus 213 ~~~~~~~~~ 221 (312)
.|.+|++.+
T Consensus 235 ~g~~~~i~~ 243 (249)
T PRK09135 235 TGQILAVDG 243 (249)
T ss_pred cCcEEEECC
Confidence 467777764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-17 Score=133.89 Aligned_cols=204 Identities=14% Similarity=0.114 Sum_probs=132.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc--
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
|+.++++||||+|+||+++++.|+++|++|+++ .|+ .++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARS-----RKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 456899999999999999999999999998774 665 32321 112222 3457889999999998888776
Q ss_pred -----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|+|||+++..... ..|.....++++++.. .+ .++||+ |+.+.... ..+
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-----~~~ 150 (250)
T PRK08063 77 DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRY-----LEN 150 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccC-----CCC
Confidence 479999999864321 1456666666666654 34 457776 65443211 122
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+++. .++++++++||.+..+....+.... ..............+++.+|+|+++
T Consensus 151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~ 224 (250)
T PRK08063 151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNRE------ELLEDARAKTPAGRMVEPEDVANAV 224 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCch------HHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 34566699999888763 5788999999988765433221100 0000000001112468999999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++.++. ..|+.+++.|
T Consensus 225 ~~~~~~~~~~~~g~~~~~~g 244 (250)
T PRK08063 225 LFLCSPEADMIRGQTIIVDG 244 (250)
T ss_pred HHHcCchhcCccCCEEEECC
Confidence 99997653 2366777754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=133.25 Aligned_cols=152 Identities=14% Similarity=0.095 Sum_probs=107.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh---ccCCCeEEEccCCCHHHHHHHhc-cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF---KEQGAKLVSGSFNDYQSLVNAVK-LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~l~~~~~-~~d~ 78 (312)
+++|+||||+|+||++++++|++.|++|++++|+ +.+...+... ...++.++++|+.|++++.+++. ++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI-----APQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCE
Confidence 4789999999999999999999999999999997 4333222111 13468899999999999999887 8999
Q ss_pred EEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHH
Q 021470 79 VICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 79 v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
|||+++..... ..|+.+ .+.++.++++.+ .+++|+ |+.+..... .....|..+|.
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~-----~~~~~Y~~sK~ 150 (257)
T PRK09291 77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG-----PFTGAYCASKH 150 (257)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC-----CCcchhHHHHH
Confidence 99999864321 134443 344556666667 678876 554322111 11234555999
Q ss_pred HHHHHHH-------HhCCCeEEEeccccccccc
Q 021470 140 VVRKAIE-------DAGIPFTYVSANCFAGYFL 165 (312)
Q Consensus 140 ~~e~~~~-------~~~~~~~i~r~~~~~~~~~ 165 (312)
.++.+.+ ..+++++++|||.+..++.
T Consensus 151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~ 183 (257)
T PRK09291 151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN 183 (257)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcccccch
Confidence 9886654 3589999999999876543
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=131.50 Aligned_cols=203 Identities=14% Similarity=0.082 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|++|++++++|+++|++|++++|+ +++.+.+ ..+. ..++.++++|+.|++++.++++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN-----EEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999999999999998 4333221 2222 2457899999999999988775
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHH----HHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLV----DAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~----~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+.....++ +++++.+ .++||+ |+.+.... ..+...
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~ 153 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRP-----RPGLGW 153 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCC-----CCCchH
Confidence 579999999863211 13444444444 4444455 677775 55443221 122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .+++++.++||.+...+........ ....... .........+++++|+|++++.+
T Consensus 154 y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~dva~~~~~l 229 (251)
T PRK07231 154 YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP---TPENRAK-FLATIPLGRLGTPEDIANAALFL 229 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc---ChHHHHH-HhcCCCCCCCcCHHHHHHHHHHH
Confidence 55599887766553 3788999999988665433222110 0000000 01111223578999999999999
Q ss_pred hcCCc-cC-CceEEec
Q 021470 207 INDPR-TL-NRTMYLR 220 (312)
Q Consensus 207 l~~~~-~~-~~~~~~~ 220 (312)
+..+. .. |..+.+.
T Consensus 230 ~~~~~~~~~g~~~~~~ 245 (251)
T PRK07231 230 ASDEASWITGVTLVVD 245 (251)
T ss_pred hCccccCCCCCeEEEC
Confidence 97653 22 4445554
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=133.28 Aligned_cols=207 Identities=12% Similarity=0.066 Sum_probs=131.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|++|+++++.|+++|++|+++.|+ ++..+.. +.....++.++.+|+.|++++.++++
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS-----EAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5799999999999999999999999999999997 3333221 22222356889999999998887764
Q ss_pred cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHH----HhCCC-ceeec-CCCCCCcccccccCCCCCc
Q 021470 75 LVDVVICAISGVHIR---------------SHQILLQLKLVDAIK----EAGNV-KRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~----~~~~v-~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+..+.++++++. ..+ . +++++ |+....... .+...
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~-----~~~~~ 159 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGY-----PGRTP 159 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCC-----CCCch
Confidence 689999999876211 145666666666653 334 3 45554 443321111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEe----CCCCcceeeeeHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLL----GDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~D~a~~ 202 (312)
|..+|...+.+++. .+++++++|||.+.+............ ..+...... ........+++++|++++
T Consensus 160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 238 (264)
T PRK12829 160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQ-QLGIGLDEMEQEYLEKISLGRMVEPEDIAAT 238 (264)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhh-ccCCChhHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 55599988877654 378899999999877644322110000 000000000 000112358999999999
Q ss_pred HHHHhcCC--ccCCceEEecC
Q 021470 203 TMKAINDP--RTLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~--~~~~~~~~~~~ 221 (312)
+..++... ...+..+++.+
T Consensus 239 ~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 239 ALFLASPAARYITGQAISVDG 259 (264)
T ss_pred HHHHcCccccCccCcEEEeCC
Confidence 98888643 22466777764
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-16 Score=131.51 Aligned_cols=195 Identities=10% Similarity=0.054 Sum_probs=125.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhh-ccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSF-KEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l-~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+. ++.+ ..+.+ ....+.++++|++|++++.++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA-----EAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH-----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999983 2222 11222 13457899999999999888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+....+ ++.++++.+ .+++++ |+.+..... .+...|
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----~~~~~Y 153 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG-----RGRAAY 153 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC-----CCccHH
Confidence 689999999964321 144555444 444455566 677775 553322111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce-eeeeHHHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA-IYVDEDDIAMYTMKA 206 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~a~~~~~~ 206 (312)
..+|...+.+++. .+++++.++||.+.+.......... ................ .+++.+|+++++..+
T Consensus 154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l 230 (252)
T PRK06138 154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH---ADPEALREALRARHPMNRFGTAEEVAQAALFL 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccc---cChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 5599888777654 3789999999988766433221100 0000000000011112 378899999999999
Q ss_pred hcCCc
Q 021470 207 INDPR 211 (312)
Q Consensus 207 l~~~~ 211 (312)
+.++.
T Consensus 231 ~~~~~ 235 (252)
T PRK06138 231 ASDES 235 (252)
T ss_pred cCchh
Confidence 98764
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-16 Score=130.38 Aligned_cols=204 Identities=10% Similarity=0.040 Sum_probs=129.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
++++|||||+|+||+++++.|+++|++|++++|+. ++.+ ....+. ..++.++.+|++|.+++.++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQ-----DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCCh-----HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999973 2221 112222 2356779999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCC------ceeec-CCCCCCccccccc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNV------KRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v------~~~v~-S~~g~~~~~~~~~ 127 (312)
++|+|||+++..... ..|+.+..+++++ +.+.+ . .++|+ |+.+.....
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~~---- 155 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYEGHIVNTASMAGLLAP---- 155 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCCeEEEEeCChhhccCC----
Confidence 479999999975421 1556666665555 44444 2 35665 443322111
Q ss_pred CCCCCchhhhHHHHHHHHHH----hC-----CCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 128 MEPGRVTFDDKMVVRKAIED----AG-----IPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~----~~-----~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
.+...|..+|..++.+.+. .+ +.+..+.||.+...+... ...++..+.+++...+++++++|
T Consensus 156 -~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T PRK06194 156 -PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS--------ERNRPADLANTAPPTRSQLIAQA 226 (287)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc--------cccCchhcccCccccchhhHHHH
Confidence 1223455599998887753 22 344455665543332211 12334455566667778888888
Q ss_pred HHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
........ + .++..|+++.+.+.++.+
T Consensus 227 ~~~~~~~~----------------~-~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 227 MSQKAVGS----------------G-KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHHhhhhc----------------c-CCCHHHHHHHHHHHHHcC
Confidence 77654211 1 267888888888866543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-16 Score=129.66 Aligned_cols=201 Identities=10% Similarity=0.032 Sum_probs=130.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|.++ .|+ .++.+ ....+. ...++++++|+.|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN-----KQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 4799999999999999999999999999876 565 22221 222232 2357889999999999888776
Q ss_pred ---------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccC
Q 021470 75 ---------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 ---------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|++||+++..... ..|+....++++++... + ..++|+ |+..... +.
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~sS~~~~~-----~~ 154 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-EGRVINISSAEVRL-----GF 154 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-CCEEEEECCHHhcC-----CC
Confidence 489999999864321 15677788888887753 2 235664 5433211 11
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.+...|..+|..++.+.+. .++++++++||.+............ ..............+++++|+++
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~ 228 (254)
T PRK12746 155 TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDP------EIRNFATNSSVFGRIGQVEDIAD 228 (254)
T ss_pred CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccCh------hHHHHHHhcCCcCCCCCHHHHHH
Confidence 2224455699988776542 4788999999988765432211100 00000001111235678999999
Q ss_pred HHHHHhcCCc--cCCceEEec
Q 021470 202 YTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~ 220 (312)
++..++.++. ..|..|++.
T Consensus 229 ~~~~l~~~~~~~~~g~~~~i~ 249 (254)
T PRK12746 229 AVAFLASSDSRWVTGQIIDVS 249 (254)
T ss_pred HHHHHcCcccCCcCCCEEEeC
Confidence 9998887653 246677775
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-16 Score=130.28 Aligned_cols=207 Identities=10% Similarity=0.009 Sum_probs=130.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
+++|+||||+|+||++++++|+++|++|++..|+... ........+. ...+..+.+|+++++++.++++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE---EMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChH---HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999887765321 1111122222 2356788999999988877665
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
++|+|||+++..... ..|+....++++++.+.- ...++|+ |+.... .+..+...|..+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----~~~~~~~~Y~~s 157 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-----RPAYGLSIYGAM 157 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-----CCCCCchHHHHH
Confidence 579999999863321 145556667777766541 0235665 443221 122233455569
Q ss_pred HHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 138 KMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 138 K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
|..++.+.+. .++.+.+++||++.......+..... ...... .........+++++|+|+++..++..+.
T Consensus 158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~dva~~~~~~~~~~~ 233 (252)
T PRK06077 158 KAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG--MSEKEF--AEKFTLMGKILDPEEVAEFVAAILKIES 233 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc--ccHHHH--HHhcCcCCCCCCHHHHHHHHHHHhCccc
Confidence 9988877763 25778888999886543221111100 000000 0011112368999999999999998765
Q ss_pred cCCceEEecC
Q 021470 212 TLNRTMYLRP 221 (312)
Q Consensus 212 ~~~~~~~~~~ 221 (312)
..++.|++.+
T Consensus 234 ~~g~~~~i~~ 243 (252)
T PRK06077 234 ITGQVFVLDS 243 (252)
T ss_pred cCCCeEEecC
Confidence 5677888864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=130.39 Aligned_cols=202 Identities=13% Similarity=0.140 Sum_probs=132.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||++++++|+++|++|+++.|+ +++.+ ..+.+.. ..+..+++|+.|++++.++++
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD-----PAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3799999999999999999999999999999997 33332 2223322 347788999999998888875
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..++++++.+. + ..++|+ |+..... +..+...
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~~~ 158 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSAL-----ARPGIAP 158 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhcc-----CCCCCcc
Confidence 479999999875321 15666777777777643 4 567776 5433211 1122344
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++|+.+.+.......... ..............+..++|+|+++..+
T Consensus 159 y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~l 232 (255)
T PRK07523 159 YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADP------EFSAWLEKRTPAGRWGKVEELVGACVFL 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCH------HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599988777653 5788999999988766433211100 0000011111123467899999999999
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..+.. .|..+++.|
T Consensus 233 ~~~~~~~~~G~~i~~~g 249 (255)
T PRK07523 233 ASDASSFVNGHVLYVDG 249 (255)
T ss_pred cCchhcCccCcEEEECC
Confidence 976432 356677754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9e-16 Score=128.63 Aligned_cols=221 Identities=15% Similarity=0.057 Sum_probs=138.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++.+|+ .++.+ ..+.+.. ..+.++++|++|++++.++++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVD-----KPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999988 33332 2233332 246788999999999888765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+..++++++. +.+...++|+ |+..... +..+...
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~-----~~~~~~~ 155 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV-----PNAGLGA 155 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc-----CCCCCch
Confidence 479999999864311 256667777777764 3331245664 4432211 1122344
Q ss_pred hhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCcc-CCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSI-LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..++.+.+ ..++++++++|+.+.............. ..........+......++++++|+|+.++.
T Consensus 156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (275)
T PRK05876 156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD 235 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence 5559987444332 2578999999998876654322111000 0001111122322334578999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.+..++ .+.+. + .....++.+.+.++..
T Consensus 236 ai~~~~----~~~~~--~-~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 236 AILANR----LYVLP--H-AASRASIRRRFERIDR 263 (275)
T ss_pred HHHcCC----eEEec--C-hhhHHHHHHHHHHHHH
Confidence 987653 33442 3 4566666666665543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=131.52 Aligned_cols=203 Identities=13% Similarity=0.059 Sum_probs=128.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+ .++.+.. ..+. ...+.++.+|++|++++.++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARR-----VEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999987 3332211 1222 2357788999999999887775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+..+.++++++.. .+ ..++|+ |+...... ..+...
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~ 158 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQ-----RPHMGA 158 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCC-----CCCcch
Confidence 579999999865321 2566667777776643 33 456775 44322111 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+++. .+++++++|||.+.............. .........+ ......+++++|+|++++.+
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~dva~a~~~~ 236 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIG-PMLEDWAKWG-QARHDYFLRASDLARAITFV 236 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhh-HHHHHHHHhc-ccccccccCHHHHHHHHHHH
Confidence 55599999887764 278999999987644321111000000 0000000001 12234689999999999999
Q ss_pred hcCCccCCceEEe
Q 021470 207 INDPRTLNRTMYL 219 (312)
Q Consensus 207 l~~~~~~~~~~~~ 219 (312)
++.+. .+.+|++
T Consensus 237 ~~~~~-~~~~~~~ 248 (274)
T PRK07775 237 AETPR-GAHVVNM 248 (274)
T ss_pred hcCCC-CCCeeEE
Confidence 98764 3445555
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.8e-16 Score=127.92 Aligned_cols=201 Identities=14% Similarity=0.088 Sum_probs=127.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||||++|+++++.|+++|++|++++|+.... .......+. ..++.++.+|+.|++++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG---AEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999988874321 111112222 3467888999999998888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+....++++++.. .+ .+++++ |+.+..... .....|
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~-----~~~~~y 155 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGN-----PGQANY 155 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCC-----CCCchh
Confidence 579999999864321 1456666667766654 34 566775 543322221 112345
Q ss_pred hhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++ ..++.+++++||.+............ . .. .........+.+.+|+++++..++
T Consensus 156 ~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~---~-~~----~~~~~~~~~~~~~~~va~~~~~l~ 227 (248)
T PRK05557 156 AASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDV---K-EA----ILAQIPLGRLGQPEEIASAVAFLA 227 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHH---H-HH----HHhcCCCCCCcCHHHHHHHHHHHc
Confidence 558888776554 24788999999987654332211100 0 00 000111124578999999998888
Q ss_pred cCC--ccCCceEEec
Q 021470 208 NDP--RTLNRTMYLR 220 (312)
Q Consensus 208 ~~~--~~~~~~~~~~ 220 (312)
... ...++.+++.
T Consensus 228 ~~~~~~~~g~~~~i~ 242 (248)
T PRK05557 228 SDEAAYITGQTLHVN 242 (248)
T ss_pred CcccCCccccEEEec
Confidence 652 2345677775
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=131.68 Aligned_cols=151 Identities=15% Similarity=0.185 Sum_probs=110.4
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|. +++++||||+|+||+++++.|+++|++|++++|+ +++. +.+...+++++.+|++|.+++.++++
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~-----~~~~---~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 72 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRK-----EEDV---AALEAEGLEAFQLDYAEPESIAALVAQVLEL 72 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 44 4689999999999999999999999999999998 5444 23334578999999999988877664
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.+ ++++++++++.+ ..++|+ |+..... +..+..
T Consensus 73 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~-----~~~~~~ 146 (277)
T PRK05993 73 SGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLV-----PMKYRG 146 (277)
T ss_pred cCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcC-----CCCccc
Confidence 469999999864321 144444 667788887777 677776 4432211 112234
Q ss_pred chhhhHHHHHHHHH-------HhCCCeEEEeccccccccc
Q 021470 133 VTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFL 165 (312)
Q Consensus 133 ~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~ 165 (312)
.|..+|..++.+.+ ..|+++++++||.+...+.
T Consensus 147 ~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~ 186 (277)
T PRK05993 147 AYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186 (277)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence 55569999988764 3589999999998876543
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.5e-16 Score=127.74 Aligned_cols=201 Identities=13% Similarity=0.111 Sum_probs=131.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||+|+||+++++.|+++|++|+++.|..... .++.+. ...+. ...++++.+|+.|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG-RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc-HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999987753322 223221 12222 2367889999999998888764
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH-----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK-----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~-----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+....++++++. +.+ .+++|+ |+.+..... .+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~ 158 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN-----RGQV 158 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC-----CCCc
Confidence 589999999875421 156777888888887 344 567775 554332211 1224
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|...+.+.+. .++++++++||.+.+......... .. .........+.+.+|+++++..
T Consensus 159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-------~~---~~~~~~~~~~~~~~~va~~~~~ 228 (249)
T PRK12827 159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-------EH---LLNPVPVQRLGEPDEVAALVAF 228 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-------HH---HHhhCCCcCCcCHHHHHHHHHH
Confidence 555599877665542 479999999999876543221100 00 0000011234588999999999
Q ss_pred HhcCCcc--CCceEEec
Q 021470 206 AINDPRT--LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~~--~~~~~~~~ 220 (312)
++.+... .++.+.+.
T Consensus 229 l~~~~~~~~~g~~~~~~ 245 (249)
T PRK12827 229 LVSDAASYVTGQVIPVD 245 (249)
T ss_pred HcCcccCCccCcEEEeC
Confidence 8866422 24555664
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-16 Score=129.63 Aligned_cols=189 Identities=14% Similarity=0.114 Sum_probs=126.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------- 74 (312)
+++|+||||+|+||.++++.|+++|++|++++|+ +++.+. +...+++.+++|+.|.+++.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~-----~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRK-----PDDVAR---MNSLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHhHH---HHhCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999999998 555432 233468899999999888766553
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHH----HHHHHHHHhCCCceeec-CC-CCCCcccccccCCCCCch
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQL----KLVDAIKEAGNVKRFLP-SE-FGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~ 134 (312)
++|.++|+++..... ..|+.+.. .+++++++.+ .+++|+ |+ ++... ......|
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~------~~~~~~Y 146 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIS------TPGRGAY 146 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccC------CCCccHH
Confidence 468999999864321 13343333 3567777776 677765 44 33211 1122445
Q ss_pred hhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+ ..++++++++||.+...+....... .........+...+.+++++|+++++..++
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~ 220 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT------QSDKPVENPGIAARFTLGPEAVVPKLRHAL 220 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch------hhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence 559998887643 3578899999988765544322111 001111112222345799999999999999
Q ss_pred cCCcc
Q 021470 208 NDPRT 212 (312)
Q Consensus 208 ~~~~~ 212 (312)
++++.
T Consensus 221 ~~~~~ 225 (256)
T PRK08017 221 ESPKP 225 (256)
T ss_pred hCCCC
Confidence 87753
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.6e-16 Score=127.29 Aligned_cols=190 Identities=13% Similarity=0.107 Sum_probs=124.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
|+|+||||+|++|.++++.|+++|++|++++|+ +++.+.+......++.++.+|+.|.+++.++++ ++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 589999999999999999999999999999998 555433322223468899999999988887764 68
Q ss_pred CEEEEcCCCCcc----c-----------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 77 DVVICAISGVHI----R-----------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 77 d~v~~~~~~~~~----~-----------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
|+|||+++.... . +.|+.+ .+.++.++++.+ ..++|+ |+.+... +..+...|..
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~~~~~~~Y~~ 149 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW-----PYAGGNVYGA 149 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCC-----CCCCCchhHH
Confidence 999999986321 0 134444 444555555666 667775 5533221 1122345555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++.+.+++||.+.+.......... ........+ . ...++..+|+|+++..++..
T Consensus 150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~---~~~~~~~~~-~---~~~~~~~~dvA~~~~~l~~~ 222 (248)
T PRK10538 150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---DDGKAEKTY-Q---NTVALTPEDVSEAVWWVATL 222 (248)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC---cHHHHHhhc-c---ccCCCCHHHHHHHHHHHhcC
Confidence 99998877653 3678899999988644321100000 000000001 1 12457899999999999987
Q ss_pred Cc
Q 021470 210 PR 211 (312)
Q Consensus 210 ~~ 211 (312)
+.
T Consensus 223 ~~ 224 (248)
T PRK10538 223 PA 224 (248)
T ss_pred CC
Confidence 64
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-15 Score=128.17 Aligned_cols=189 Identities=16% Similarity=0.142 Sum_probs=125.6
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+ +++|+||||+|+||+++++.|+++|++|++++|+. ++. . ...+++++++|+.|++++.++++
T Consensus 1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~-----~~~---~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 70 (270)
T PRK06179 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP-----ARA---A--PIPGVELLELDVTDDASVQAAVDEVIAR 70 (270)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCh-----hhc---c--ccCCCeeEEeecCCHHHHHHHHHHHHHh
Confidence 54 56899999999999999999999999999999983 222 1 13478999999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..+++++ +++.+ ..++|+ |+...... ......
T Consensus 71 ~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~ 144 (270)
T PRK06179 71 AGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLP-----APYMAL 144 (270)
T ss_pred CCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCC-----CCCccH
Confidence 369999999975421 1455555555555 45666 678775 54322111 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC---------CCcceeeeeHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD---------GNPKAIYVDED 197 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~ 197 (312)
|..+|..++.+.+. .++++++++||.+..++........ ........ ..........+
T Consensus 145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (270)
T PRK06179 145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPD------SPLAEYDRERAVVSKAVAKAVKKADAPE 218 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCC------CcchhhHHHHHHHHHHHHhccccCCCHH
Confidence 55599988876553 5899999999998776544322110 00000000 00111245678
Q ss_pred HHHHHHHHHhcCCc
Q 021470 198 DIAMYTMKAINDPR 211 (312)
Q Consensus 198 D~a~~~~~~l~~~~ 211 (312)
|+|+.++.++..+.
T Consensus 219 ~va~~~~~~~~~~~ 232 (270)
T PRK06179 219 VVADTVVKAALGPW 232 (270)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999998887764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-15 Score=123.02 Aligned_cols=189 Identities=20% Similarity=0.206 Sum_probs=126.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-CCCeEEEccCCCHHHHHHHhc-------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-QGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
++|+||||+|++|++++++|+++|++|++++|+ +++.+.. +.+.. .+++++++|+.|.+++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARD-----QKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFG 81 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC-----HHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999998 4443222 22322 568899999999988887765
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|+|||+++..... ..|+.....+++++... + ..++|+ |+..... +..+...|..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~-----~~~~~~~y~~ 155 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTN-----FFAGGAAYNA 155 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhcc-----CCCCCchHHH
Confidence 689999999865321 13555566676666542 3 456665 5432211 1122344556
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .+++++.+||+.+..++...... ......+..+|+++.+..++..
T Consensus 156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-----------------~~~~~~~~~~d~a~~~~~~l~~ 218 (237)
T PRK07326 156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-----------------EKDAWKIQPEDIAQLVLDLLKM 218 (237)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc-----------------hhhhccCCHHHHHHHHHHHHhC
Confidence 88876655543 58899999999887654322100 0001237899999999999987
Q ss_pred Cc-cCCceEEec
Q 021470 210 PR-TLNRTMYLR 220 (312)
Q Consensus 210 ~~-~~~~~~~~~ 220 (312)
+. .......+.
T Consensus 219 ~~~~~~~~~~~~ 230 (237)
T PRK07326 219 PPRTLPSKIEVR 230 (237)
T ss_pred CccccccceEEe
Confidence 64 334444553
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-15 Score=119.55 Aligned_cols=194 Identities=16% Similarity=0.142 Sum_probs=132.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.|.++|||||+.||.++++.|.+.|++|++..|+ .++.+.+ ..+....+..+..|++|.+++.++++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR-----~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARR-----EERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecc-----HHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence 3579999999999999999999999999999999 6666543 33433468899999999988666554
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+||..... ++|+.+..+..++.. +.+ .-++|. ||....... +....|.
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y-----~~~~vY~ 154 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPY-----PGGAVYG 154 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccC-----CCCccch
Confidence 699999999986532 267777666655544 444 346774 544332211 1134566
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|+.+..+... .+++++.+-||.+....++.....+ .... ...-......+..+|+|+++.++++
T Consensus 155 ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g----~~~~---~~~~y~~~~~l~p~dIA~~V~~~~~ 227 (246)
T COG4221 155 ATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG----DDER---ADKVYKGGTALTPEDIAEAVLFAAT 227 (246)
T ss_pred hhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc----hhhh---HHHHhccCCCCCHHHHHHHHHHHHh
Confidence 699998777643 5788999999988654443322211 0000 0000112367899999999999999
Q ss_pred CCccCC
Q 021470 209 DPRTLN 214 (312)
Q Consensus 209 ~~~~~~ 214 (312)
.|++.+
T Consensus 228 ~P~~vn 233 (246)
T COG4221 228 QPQHVN 233 (246)
T ss_pred CCCccc
Confidence 997543
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.8e-16 Score=130.70 Aligned_cols=203 Identities=25% Similarity=0.267 Sum_probs=133.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhh-hhccCCCeEEEccCCCH-HHHHHHhc----c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLL-SFKEQGAKLVSGSFNDY-QSLVNAVK----L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~-~l~~~~~~~v~~D~~d~-~~l~~~~~----~ 75 (312)
+++|+|+||||.+|+.+++.|+++|+.|+++.|+. ++.. .+. .....+...+..|...+ +.+..+.. +
T Consensus 79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~-----~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDE-----QKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccCh-----hhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 67899999999999999999999999999999983 3332 111 12245566666665444 33333333 3
Q ss_pred CCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC---chhhhHHHHHHH
Q 021470 76 VDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR---VTFDDKMVVRKA 144 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~---~~~~~K~~~e~~ 144 (312)
..+++.+++..... .+...+++|+++||+.+| ++|+++ ++++..... .+.+... ..+..|..+|++
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~--~~~~~~~~~~~~~~~k~~~e~~ 230 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFN--QPPNILLLNGLVLKAKLKAEKF 230 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccC--CCchhhhhhhhhhHHHHhHHHH
Confidence 44666666654332 266788999999999999 999986 676654321 1111111 233588999999
Q ss_pred HHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCC-ceEEe
Q 021470 145 IEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLN-RTMYL 219 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~-~~~~~ 219 (312)
+++++++++|||++.+..+......... ...+. ...++..--.+...|+|+.++.++.++.... .+.++
T Consensus 231 ~~~Sgl~ytiIR~g~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~ 300 (411)
T KOG1203|consen 231 LQDSGLPYTIIRPGGLEQDTGGQREVVV----DDEKE--LLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVEL 300 (411)
T ss_pred HHhcCCCcEEEeccccccCCCCcceecc----cCccc--cccccccceeeehhhHHHHHHHHHhhhhhccceeEEe
Confidence 9999999999999988765443222211 11111 1112221247889999999999998875444 34343
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=125.72 Aligned_cols=200 Identities=14% Similarity=0.125 Sum_probs=131.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++++||||+|++|+++++.|+++|++|++++|+ +++.+.+.. ..+..++.+|++|.+++.++++ ++|+|
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~d~v 81 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARN-----AAALDRLAG--ETGCEPLRLDVGDDAAIRAALAAAGAFDGL 81 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HhCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 3689999999999999999999999999999998 444432221 2357789999999998888876 48999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
||+++..... ..|+....++++++.+. +...++|+ |+...... ..+...|..+|..
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~y~~sK~a 156 (245)
T PRK07060 82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG-----LPDHLAYCASKAA 156 (245)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC-----CCCCcHhHHHHHH
Confidence 9999865321 15666777777777653 11246665 54332111 1122456669999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-c
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-T 212 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~ 212 (312)
++.+++. .+++++.++||.+.++........ .. ....+. .......+++++|+++++..++..+. .
T Consensus 157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 230 (245)
T PRK07060 157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD----PQ-KSGPML-AAIPLGRFAEVDDVAAPILFLLSDAASM 230 (245)
T ss_pred HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC----HH-HHHHHH-hcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence 8887653 378889999998876643211000 00 000000 01112357899999999999998653 2
Q ss_pred -CCceEEec
Q 021470 213 -LNRTMYLR 220 (312)
Q Consensus 213 -~~~~~~~~ 220 (312)
.|+.+++.
T Consensus 231 ~~G~~~~~~ 239 (245)
T PRK07060 231 VSGVSLPVD 239 (245)
T ss_pred ccCcEEeEC
Confidence 35666664
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-15 Score=125.39 Aligned_cols=203 Identities=11% Similarity=0.053 Sum_probs=129.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc-------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
++++||||+|+||+++++.|+++|++|++++|+.... .....+.+. ..++.++++|++|++++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE---LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 7899999999999999999999999999999874321 111112222 3468899999999988777664
Q ss_pred cCCEEEEcCCCCccc----------------cchhHhHHHHHHHHHHh----CC-----Cceeec-CCCCCCcccccccC
Q 021470 75 LVDVVICAISGVHIR----------------SHQILLQLKLVDAIKEA----GN-----VKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~----~~-----v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|+|||+++..... ..|+....++++++... .. +.++|+ |+...... .
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~ 154 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-----S 154 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-----C
Confidence 579999999864210 15677777777776543 10 345665 54332211 1
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.+...|..+|..++.+++. .++++++++||.+.+......... . ..... ........+.+..|+++
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~----~-~~~~~--~~~~~~~~~~~~~d~a~ 227 (256)
T PRK12745 155 PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK----Y-DALIA--KGLVPMPRWGEPEDVAR 227 (256)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh----H-Hhhhh--hcCCCcCCCcCHHHHHH
Confidence 1234566699998776653 578899999998876533221110 0 00000 00011124678999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++..++.... ..|..|++.|
T Consensus 228 ~i~~l~~~~~~~~~G~~~~i~g 249 (256)
T PRK12745 228 AVAALASGDLPYSTGQAIHVDG 249 (256)
T ss_pred HHHHHhCCcccccCCCEEEECC
Confidence 9998886542 2366777754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=125.87 Aligned_cols=206 Identities=15% Similarity=0.153 Sum_probs=131.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|.+++++||||+|+||+++++.|++.|++|++++|+ .++.+.+ ..+. ..++.++++|+.|.+++.++++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN-----REAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999999999999987 3333211 2221 3468899999999998888765
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+....++++++. +.+ ..++++ |+.+..... ...
T Consensus 76 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~-----~~~ 149 (250)
T TIGR03206 76 QALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGS-----SGE 149 (250)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCC-----CCC
Confidence 589999999853210 156666777666654 455 567775 443322111 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-EEeCCCCcceeeeeHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-VLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..|..+|..++.+.+. .++++++++||.+.+.+........ .....+ ..+........+...+|+|+++
T Consensus 150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 226 (250)
T TIGR03206 150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---ENPEKLREAFTRAIPLGRLGQPDDLPGAI 226 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---CChHHHHHHHHhcCCccCCcCHHHHHHHH
Confidence 3455599777666543 3789999999998776544322110 000000 0000001112356789999999
Q ss_pred HHHhcCCc--cCCceEEec
Q 021470 204 MKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~ 220 (312)
..++..+. ..|+.+.+.
T Consensus 227 ~~l~~~~~~~~~g~~~~~~ 245 (250)
T TIGR03206 227 LFFSSDDASFITGQVLSVS 245 (250)
T ss_pred HHHcCcccCCCcCcEEEeC
Confidence 99887643 235666665
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-15 Score=124.67 Aligned_cols=200 Identities=15% Similarity=0.117 Sum_probs=131.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +........+....+..+++|+.+++++.++++ +
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRS-----EDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999997 333333333444567789999999998888765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.+..++++++.. .+ ..++|+ |+.+..... .....|..
T Consensus 90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~ 163 (255)
T PRK06841 90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL-----ERHVAYCA 163 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC-----CCCchHHH
Confidence 79999999865321 1566677777777654 34 467775 543322111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++.+..++||.+...+...... +..............+.+.+|++++++.++..
T Consensus 164 sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 236 (255)
T PRK06841 164 SKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-------GEKGERAKKLIPAGRFAYPEEIAAAALFLASD 236 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-------hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99987766653 47888899999876654321110 00000000111123577999999999999976
Q ss_pred Ccc--CCceEEec
Q 021470 210 PRT--LNRTMYLR 220 (312)
Q Consensus 210 ~~~--~~~~~~~~ 220 (312)
+.. .|..+.+.
T Consensus 237 ~~~~~~G~~i~~d 249 (255)
T PRK06841 237 AAAMITGENLVID 249 (255)
T ss_pred cccCccCCEEEEC
Confidence 532 35666664
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.4e-15 Score=127.49 Aligned_cols=238 Identities=16% Similarity=0.190 Sum_probs=161.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChH-HH------HHhhhhcc------CCCeEEEccCCCH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIE-KV------QMLLSFKE------QGAKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~-~~------~~~~~l~~------~~~~~v~~D~~d~ 66 (312)
.++|+|||||||+|..+++.|+..- .+++.+.|......+. +. +.++.+.. .++..|.||+.++
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 3789999999999999999999864 5888888876654221 11 12222211 4678899999753
Q ss_pred ------HHHHHHhccCCEEEEcCCCCcccc-------chhHhHHHHHHHHHHhCCCceeec-CC-CCC------------
Q 021470 67 ------QSLVNAVKLVDVVICAISGVHIRS-------HQILLQLKLVDAIKEAGNVKRFLP-SE-FGT------------ 119 (312)
Q Consensus 67 ------~~l~~~~~~~d~v~~~~~~~~~~~-------~~~~~~~~l~~aa~~~~~v~~~v~-S~-~g~------------ 119 (312)
.++....+.+|+|||+|+...+.+ .|+.+++++++.|++....+.+++ |. |..
T Consensus 92 ~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~ 171 (467)
T KOG1221|consen 92 DLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYP 171 (467)
T ss_pred ccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccC
Confidence 666666779999999999877543 799999999999999876777775 32 211
Q ss_pred -Cc----cc---c------------cccC--CCCCchhhhHHHHHHHHHH--hCCCeEEEecccccccccccCCCCC---
Q 021470 120 -DP----AK---M------------ANAM--EPGRVTFDDKMVVRKAIED--AGIPFTYVSANCFAGYFLGGLCQPG--- 172 (312)
Q Consensus 120 -~~----~~---~------------~~~~--~p~~~~~~~K~~~e~~~~~--~~~~~~i~r~~~~~~~~~~~~~~~~--- 172 (312)
.. .. . .... ...+.|.-+|+..|..+.+ .++|.+|+||+.+...+-.++....
T Consensus 172 ~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~ 251 (467)
T KOG1221|consen 172 MPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNL 251 (467)
T ss_pred ccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccC
Confidence 00 00 0 0000 1136677799999999986 5799999999998765433222211
Q ss_pred -----cc-CCCCCe-eEEeCCCCcceeeeeHHHHHHHHHHHhc--CC--c-cCCceEEec-CCCCcCCHHHHHHHHHHHh
Q 021470 173 -----SI-LPSKDS-VVLLGDGNPKAIYVDEDDIAMYTMKAIN--DP--R-TLNRTMYLR-PPKNILSQREVVETWEKLI 239 (312)
Q Consensus 173 -----~~-~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~~~l~--~~--~-~~~~~~~~~-~~~~~~s~~e~~~~~~~~~ 239 (312)
.. ....+. -.+..+.+...++|.+|.++.+++.+.- .. . ....+|+++ +..+++++.++.+...+..
T Consensus 252 ~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~ 331 (467)
T KOG1221|consen 252 NGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYF 331 (467)
T ss_pred CCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhc
Confidence 00 111222 2245577888999999999999886651 11 1 124588887 3357899999999888765
Q ss_pred C
Q 021470 240 G 240 (312)
Q Consensus 240 g 240 (312)
-
T Consensus 332 ~ 332 (467)
T KOG1221|consen 332 E 332 (467)
T ss_pred c
Confidence 4
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=121.84 Aligned_cols=187 Identities=20% Similarity=0.262 Sum_probs=129.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc---CCCeEEEccCCCHHHHHHHhc--
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE---QGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
|++++++|||||+.||..+++.|.++|++|+.+.|+ .+|...+ +++.. -.++++.+|+++++++.++.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~-----~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARR-----EDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-----HHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH
Confidence 456899999999999999999999999999999999 6655433 33432 347899999999998888764
Q ss_pred -----cCCEEEEcCCCCcccc--------------chhHh----HHHHHHHHHHhCCCceeec--CCCCCCcccccccCC
Q 021470 75 -----LVDVVICAISGVHIRS--------------HQILL----QLKLVDAIKEAGNVKRFLP--SEFGTDPAKMANAME 129 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~~--------------~~~~~----~~~l~~aa~~~~~v~~~v~--S~~g~~~~~~~~~~~ 129 (312)
.+|++||+||...... .|+.. ++.++.-..+.+ --++|. |..|..+..
T Consensus 79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p------ 151 (265)
T COG0300 79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTP------ 151 (265)
T ss_pred HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCc------
Confidence 5899999999876431 44444 445555555655 456775 443432211
Q ss_pred CCCchhhhHHHHHHH-------HHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKA-------IEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~-------~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
-...|+.+|..+-.+ ++..|+.++.+.||.....|.. .... ..... .....+.+.+|+|+.
T Consensus 152 ~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~--------~~~~~---~~~~~~~~~~~va~~ 219 (265)
T COG0300 152 YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGS--------DVYLL---SPGELVLSPEDVAEA 219 (265)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-cccc--------ccccc---cchhhccCHHHHHHH
Confidence 123455599875433 3447899999999988877664 1111 00000 112467899999999
Q ss_pred HHHHhcCCc
Q 021470 203 TMKAINDPR 211 (312)
Q Consensus 203 ~~~~l~~~~ 211 (312)
....+...+
T Consensus 220 ~~~~l~~~k 228 (265)
T COG0300 220 ALKALEKGK 228 (265)
T ss_pred HHHHHhcCC
Confidence 999998864
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=126.26 Aligned_cols=200 Identities=19% Similarity=0.153 Sum_probs=124.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh----ccCCCeEEEccCCCHHHHHHHhcc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF----KEQGAKLVSGSFNDYQSLVNAVKL-- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l----~~~~~~~v~~D~~d~~~l~~~~~~-- 75 (312)
.++++||||+|+||+++++.|++.|++|++++|+ +++.+. ...+ ....+.++++|+.|++++.++++.
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGGIVIAADID-----KEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC-----hHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999999997 333321 1222 123466789999999999888763
Q ss_pred -----CCEEEEcCCCCcc------c-----------cchhHh----HHHHHHHHHHhCCCceeec-CC-CCCCccc----
Q 021470 76 -----VDVVICAISGVHI------R-----------SHQILL----QLKLVDAIKEAGNVKRFLP-SE-FGTDPAK---- 123 (312)
Q Consensus 76 -----~d~v~~~~~~~~~------~-----------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~-~g~~~~~---- 123 (312)
+|+|||+++.... . ..|+.. .+.++.++++.+ ..++|+ |+ .+.....
T Consensus 79 ~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~ 157 (256)
T PRK09186 79 EKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIY 157 (256)
T ss_pred HHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhc
Confidence 7999999964321 0 123333 345556666566 677776 43 3321110
Q ss_pred ccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeH
Q 021470 124 MANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDE 196 (312)
Q Consensus 124 ~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 196 (312)
...+......|..+|...+.+.+. .++++++++||.+.+.....+... .. .. .....++++
T Consensus 158 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~----~~-~~-------~~~~~~~~~ 225 (256)
T PRK09186 158 EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNA----YK-KC-------CNGKGMLDP 225 (256)
T ss_pred cccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHH----HH-hc-------CCccCCCCH
Confidence 011111112455599888877642 468889999997654321100000 00 00 011246899
Q ss_pred HHHHHHHHHHhcCCc-cC-CceEEec
Q 021470 197 DDIAMYTMKAINDPR-TL-NRTMYLR 220 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~-~~-~~~~~~~ 220 (312)
+|+|+++..++.+.. .. +..+.+.
T Consensus 226 ~dva~~~~~l~~~~~~~~~g~~~~~~ 251 (256)
T PRK09186 226 DDICGTLVFLLSDQSKYITGQNIIVD 251 (256)
T ss_pred HHhhhhHhheeccccccccCceEEec
Confidence 999999999997653 22 4444443
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=125.00 Aligned_cols=200 Identities=12% Similarity=0.094 Sum_probs=130.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhcc--CCCeEEEccCCCHHHHHHHhcc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKE--QGAKLVSGSFNDYQSLVNAVKL---- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~~---- 75 (312)
.++++||||+|+||+++++.|+++|++|+++.++. +++. +..+.+.. .++.++++|+.|++++.++++.
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSS----KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCc----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999998765542 2222 12233322 3578899999999988887764
Q ss_pred ---CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 76 ---VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 ---~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|+|||+++..... ..|+.....+++++.. .+ ..++|+ |+...... ..+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~ 155 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAG-----GFGQTN 155 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCC-----CCCCcc
Confidence 79999999874421 1566667777777764 33 346665 54322111 122345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+++. .++++++++||.+........... .. .. .........+.+++|++++++.+
T Consensus 156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----~~-~~---~~~~~~~~~~~~~edva~~~~~~ 227 (247)
T PRK12935 156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEE----VR-QK---IVAKIPKKRFGQADEIAKGVVYL 227 (247)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHH----HH-HH---HHHhCCCCCCcCHHHHHHHHHHH
Confidence 66699987766543 378899999998765432211100 00 00 00112234678999999999999
Q ss_pred hcCCc-cCCceEEec
Q 021470 207 INDPR-TLNRTMYLR 220 (312)
Q Consensus 207 l~~~~-~~~~~~~~~ 220 (312)
++... ..+..+++.
T Consensus 228 ~~~~~~~~g~~~~i~ 242 (247)
T PRK12935 228 CRDGAYITGQQLNIN 242 (247)
T ss_pred cCcccCccCCEEEeC
Confidence 87653 346777775
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=125.97 Aligned_cols=198 Identities=12% Similarity=0.021 Sum_probs=129.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||.+++++|+++|++|+++.|+ +++.+ ..+.+. ..++.++.+|++|.+++.++++
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADIN-----AEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 32221 112222 2356788999999988877665
Q ss_pred --cCCEEEEcCCCCcc-----------------ccchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCC
Q 021470 75 --LVDVVICAISGVHI-----------------RSHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-----------------~~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|+|||+++.... ...|+....++++++... + .+++|+ |+.+... +
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--------~ 151 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL--------Y 151 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC--------C
Confidence 58999999996421 026777788888877753 3 356665 5433211 2
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++.+++++||.+............. .......-....+.+++|+++++
T Consensus 152 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~a~~~ 224 (250)
T PRK07774 152 SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEF-------VADMVKGIPLSRMGTPEDLVGMC 224 (250)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHH-------HHHHHhcCCCCCCcCHHHHHHHH
Confidence 34566699998887764 36778899998776543221110000 00000000111245789999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
..++..+. ..++.|++.+
T Consensus 225 ~~~~~~~~~~~~g~~~~v~~ 244 (250)
T PRK07774 225 LFLLSDEASWITGQIFNVDG 244 (250)
T ss_pred HHHhChhhhCcCCCEEEECC
Confidence 99987653 2466777754
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.2e-15 Score=122.20 Aligned_cols=181 Identities=14% Similarity=0.139 Sum_probs=122.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|++|.+++++|+++|++|++++|+ +++.+. ...+. ..++.++++|+++++++.++++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLART-----EENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999999998 333221 12222 2357889999999999888776
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+....++++++. +.+ .+++|+ |+....... .+...|
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~Y 156 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA-----AVTSAY 156 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC-----CCCcch
Confidence 689999999864321 145555566666665 334 556665 443221111 122345
Q ss_pred hhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++ ..++++++++||.+.......... .. .....++..+|+|+++..++
T Consensus 157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~-----~~----------~~~~~~~~~~~~a~~~~~~l 221 (239)
T PRK07666 157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL-----TD----------GNPDKVMQPEDLAEFIVAQL 221 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc-----cc----------cCCCCCCCHHHHHHHHHHHH
Confidence 558888766654 258999999999887653321100 00 01124578999999999999
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
..+
T Consensus 222 ~~~ 224 (239)
T PRK07666 222 KLN 224 (239)
T ss_pred hCC
Confidence 876
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-15 Score=125.23 Aligned_cols=210 Identities=16% Similarity=0.112 Sum_probs=131.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++.+ ..+.+. ..++..+.+|++|++++.++++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART-----AERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHH
Confidence 345899999999999999999999999999999997 33332 222232 3457899999999988877664
Q ss_pred ----cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ----LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . ..|+.+...+++++...- ...++|+ |+..... +..+..
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----~~~~~~ 152 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH-----SQPKYG 152 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----CCCCcc
Confidence 57999999986421 0 156666777777776531 0246665 5433221 112234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCC--C-CCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILP--S-KDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
.|..+|..++.+++. .++++..++||.+.+.............. . ...............+.+++|++++
T Consensus 153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a 232 (258)
T PRK07890 153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASA 232 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHH
Confidence 565699988877764 37889999999988765432211100000 0 0000000011112346789999999
Q ss_pred HHHHhcCC--ccCCceEEec
Q 021470 203 TMKAINDP--RTLNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~--~~~~~~~~~~ 220 (312)
+..++... ...|+.+.+.
T Consensus 233 ~~~l~~~~~~~~~G~~i~~~ 252 (258)
T PRK07890 233 VLFLASDLARAITGQTLDVN 252 (258)
T ss_pred HHHHcCHhhhCccCcEEEeC
Confidence 99888753 2234544443
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-15 Score=123.49 Aligned_cols=202 Identities=11% Similarity=0.027 Sum_probs=131.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|+.|++++.++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGL-----AAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999887 443321 12222 2357889999999999888774
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC---CCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG---NVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~---~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|.....++++++...- ...++|+ |+.+.... ......|
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y 156 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG-----APKLGAY 156 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC-----CCCcchH
Confidence 589999999875321 145666777777765431 0346775 44222111 1112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++. .++++..++||.+..+....... ......+........+++++|+|+++..++
T Consensus 157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 229 (250)
T PRK12939 157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-------DERHAYYLKGRALERLQVPDDVAGAVLFLL 229 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence 5599988877653 46788889999876554322110 000000111122345789999999999999
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
..+. ..|+.+.+.|
T Consensus 230 ~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 230 SDAARFVTGQLLPVNG 245 (250)
T ss_pred CccccCccCcEEEECC
Confidence 7642 2466777753
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-15 Score=126.33 Aligned_cols=206 Identities=12% Similarity=0.044 Sum_probs=131.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|++.|++|++..|+.... ......+.+. ..++.++++|+.|.+++.++++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ--DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 47899999999999999999999999998887753221 0111112222 3357789999999988877764
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||+++..... ..|+.+...+++++...- .-.++|+ |+....... .....|..
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~a 207 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS-----PTLLDYAS 207 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC-----CCchhHHH
Confidence 589999999864210 167778888888887531 0135665 443322111 11234556
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+.......... .......+........+...+|+|.+++.++..
T Consensus 208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~------~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~ 281 (300)
T PRK06128 208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ------PPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQ 281 (300)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC------CHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 47899999999987664321100 000000111111223466899999999998876
Q ss_pred Ccc--CCceEEecC
Q 021470 210 PRT--LNRTMYLRP 221 (312)
Q Consensus 210 ~~~--~~~~~~~~~ 221 (312)
... .|+.+++.|
T Consensus 282 ~~~~~~G~~~~v~g 295 (300)
T PRK06128 282 ESSYVTGEVFGVTG 295 (300)
T ss_pred cccCccCcEEeeCC
Confidence 432 366777754
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.6e-16 Score=113.22 Aligned_cols=145 Identities=22% Similarity=0.310 Sum_probs=118.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|.+|..+|+||||-.|+.+++++.+.+ -+|+++.|+.... ......+..+..|++..+++...++|.|+
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d---------~at~k~v~q~~vDf~Kl~~~a~~~qg~dV 86 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD---------PATDKVVAQVEVDFSKLSQLATNEQGPDV 86 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC---------ccccceeeeEEechHHHHHHHhhhcCCce
Confidence 567899999999999999999999998 5999999984221 11245667778899889999999999999
Q ss_pred EEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCC
Q 021470 79 VICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGI 150 (312)
Q Consensus 79 v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~ 150 (312)
.|++.+.+... .+.-+....++++|++.| |++|++ ||.|.+... ...|...|.++|+-+.+.++
T Consensus 87 ~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sS-------rFlY~k~KGEvE~~v~eL~F 158 (238)
T KOG4039|consen 87 LFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSS-------RFLYMKMKGEVERDVIELDF 158 (238)
T ss_pred EEEeecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCccc-------ceeeeeccchhhhhhhhccc
Confidence 99999876532 255667889999999999 999997 898987665 35666699999999988887
Q ss_pred C-eEEEecccccc
Q 021470 151 P-FTYVSANCFAG 162 (312)
Q Consensus 151 ~-~~i~r~~~~~~ 162 (312)
+ ++|+|||.+.+
T Consensus 159 ~~~~i~RPG~ll~ 171 (238)
T KOG4039|consen 159 KHIIILRPGPLLG 171 (238)
T ss_pred cEEEEecCcceec
Confidence 6 78889998765
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.7e-15 Score=125.92 Aligned_cols=196 Identities=14% Similarity=0.085 Sum_probs=124.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+.. ..+ .++.++++|++|.+++.++++
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~-----~~~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR-----PDVAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 4444321 222 248899999999998887764
Q ss_pred cCCEEEEcCCCCccc------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccc-------cccCCC
Q 021470 75 LVDVVICAISGVHIR------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKM-------ANAMEP 130 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~-------~~~~~p 130 (312)
++|++||+++..... .+|+.+ ++.++.++++.+ ..++|+ |+.+...... ..+..+
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 177 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDK 177 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCCh
Confidence 589999999864311 145555 445555565555 467775 5533211100 112222
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce--eeeeHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA--IYVDEDDIAM 201 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~D~a~ 201 (312)
...|..+|...+.+.+. .++++++++||.+..+......... .. ............ .+...+|+|.
T Consensus 178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~a~ 252 (315)
T PRK06196 178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREE---QV--ALGWVDEHGNPIDPGFKTPAQGAA 252 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhh---hh--hhhhhhhhhhhhhhhcCCHhHHHH
Confidence 33455699987766542 4789999999999876543221100 00 000000000011 2457899999
Q ss_pred HHHHHhcCCc
Q 021470 202 YTMKAINDPR 211 (312)
Q Consensus 202 ~~~~~l~~~~ 211 (312)
.++.++..+.
T Consensus 253 ~~~~l~~~~~ 262 (315)
T PRK06196 253 TQVWAATSPQ 262 (315)
T ss_pred HHHHHhcCCc
Confidence 9999997654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9e-15 Score=121.99 Aligned_cols=190 Identities=13% Similarity=0.088 Sum_probs=126.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+ +.+.+ ..+.+. ..++.++.+|+.|++.+.++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 75 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN-----ETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR 75 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999998 33322 112222 3467888999999998888765
Q ss_pred --cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHH---hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKE---AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~---~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+....++++++.. .+ ..++|+ |+...... ..+...
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~~~ 149 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTG-----VPTRSG 149 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCC-----CCCccH
Confidence 589999999864321 1456667777777753 23 345554 44322111 112245
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++++++||.+........... .+.. ....+.....+++++|+|+++..+
T Consensus 150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~dva~~i~~~ 222 (263)
T PRK06181 150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG-----DGKP--LGKSPMQESKIMSAEECAEAILPA 222 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc-----cccc--cccccccccCCCCHHHHHHHHHHH
Confidence 55699998877653 478899999998776543321110 0111 111112223689999999999999
Q ss_pred hcCC
Q 021470 207 INDP 210 (312)
Q Consensus 207 l~~~ 210 (312)
+...
T Consensus 223 ~~~~ 226 (263)
T PRK06181 223 IARR 226 (263)
T ss_pred hhCC
Confidence 9864
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.7e-15 Score=120.56 Aligned_cols=195 Identities=14% Similarity=0.133 Sum_probs=125.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|..++++||||+|++|+++++.|+++|++|+++.|+.... ...+++++|+.|++++.++++
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------------FPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 5568999999999999999999999999999999984321 123678999999998887776
Q ss_pred cCCEEEEcCCCCcccc--------------chhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIRS--------------HQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------------~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++...... .|+... +.++.++++.+ ..++|+ |+.+.. .. .....|.
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-~~-----~~~~~Y~ 140 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF-GA-----LDRTSYS 140 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc-CC-----CCchHHH
Confidence 6899999998754211 333443 34455555566 677775 543321 11 1124555
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++.++.++||.+..+......... ......... ......+...+|+|+++..++.
T Consensus 141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~a~~~~~l~~ 215 (234)
T PRK07577 141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG----SEEEKRVLA-SIPMRRLGTPEEVAAAIAFLLS 215 (234)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc----hhHHHHHhh-cCCCCCCcCHHHHHHHHHHHhC
Confidence 699888766653 4899999999988765432111000 000000000 0011124578999999999997
Q ss_pred CCc--cCCceEEec
Q 021470 209 DPR--TLNRTMYLR 220 (312)
Q Consensus 209 ~~~--~~~~~~~~~ 220 (312)
.+. ..+..+.+.
T Consensus 216 ~~~~~~~g~~~~~~ 229 (234)
T PRK07577 216 DDAGFITGQVLGVD 229 (234)
T ss_pred cccCCccceEEEec
Confidence 653 235555554
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.9e-15 Score=121.81 Aligned_cols=203 Identities=14% Similarity=0.142 Sum_probs=126.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|+++|++|++++|+ +++.+........++.++++|+.|++++.++++ +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDID-----ADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999999999998 433322221113468899999999998887765 5
Q ss_pred CCEEEEcCCCCccc-------------cchhHhHHHHHHHHHH---hCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 76 VDVVICAISGVHIR-------------SHQILLQLKLVDAIKE---AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~---~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
+|++||+++..... ..|+.....+++++.. .+ -.++|+ |+....... .....|..+|
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-----~~~~~Y~asK 154 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTSISAKFAQ-----TGRWLYPASK 154 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC-----CCCchhHHHH
Confidence 79999999864211 1456666666665543 22 245554 443322111 1123455599
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .++++..++||.+...+......... ....... ........+...+|+|+++..++..+.
T Consensus 155 aa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~--~~~~~~~--~~~~p~~r~~~p~dva~~~~~l~s~~~ 230 (261)
T PRK08265 155 AAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR--AKADRVA--APFHLLGRVGDPEEVAQVVAFLCSDAA 230 (261)
T ss_pred HHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch--hHHHHhh--cccCCCCCccCHHHHHHHHHHHcCccc
Confidence 988777653 47888999999876554322111000 0000000 000111234678999999999997642
Q ss_pred --cCCceEEec
Q 021470 212 --TLNRTMYLR 220 (312)
Q Consensus 212 --~~~~~~~~~ 220 (312)
..|..+.+.
T Consensus 231 ~~~tG~~i~vd 241 (261)
T PRK08265 231 SFVTGADYAVD 241 (261)
T ss_pred cCccCcEEEEC
Confidence 235556664
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.7e-15 Score=120.73 Aligned_cols=199 Identities=12% Similarity=0.137 Sum_probs=125.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|+.|++..|+ +++.+........++.++.+|+.|.+++.++++ +
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR-----VEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999888887 444432221113468889999999988887653 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|+|||+++..... ..|+....++++++.+ .+ ..++|+ |+....... .....|..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~ 154 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGN-----PGQANYCA 154 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCC-----CCCcchHH
Confidence 89999999864321 1456666666666543 34 566765 543322211 11234555
Q ss_pred hHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+ ..+++++.++||++...+...... .... .... ......+...+|+++++..++..
T Consensus 155 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~------~~~~-~~~~-~~~~~~~~~~~~ia~~~~~l~~~ 226 (245)
T PRK12936 155 SKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLND------KQKE-AIMG-AIPMKRMGTGAEVASAVAYLASS 226 (245)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccCh------HHHH-HHhc-CCCCCCCcCHHHHHHHHHHHcCc
Confidence 8876655543 247889999999876543321110 0000 0000 01122356789999999988865
Q ss_pred Ccc--CCceEEec
Q 021470 210 PRT--LNRTMYLR 220 (312)
Q Consensus 210 ~~~--~~~~~~~~ 220 (312)
+.. .|+.+++.
T Consensus 227 ~~~~~~G~~~~~~ 239 (245)
T PRK12936 227 EAAYVTGQTIHVN 239 (245)
T ss_pred cccCcCCCEEEEC
Confidence 432 35667765
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-14 Score=119.95 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=128.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|+||.++++.|++.|++|+++.++.... .++. ...+.+. ...++++++|++|++++.++++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAAS-KADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccc-hHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 7899999999999999999999999988887654322 2222 1222222 2367889999999999888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceee--cCC-CCCCcccccccCCCCCchh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFL--PSE-FGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v--~S~-~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... ..|+.....+++++...- .-.+++ .|+ .+.... ....|.
T Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~-------~~~~Y~ 160 (257)
T PRK12744 88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP-------FYSAYA 160 (257)
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC-------Ccccch
Confidence 579999999863211 146667777777776431 012332 233 232211 124555
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .+++++.++||.+...+......... .................+.+++|+++++..++.
T Consensus 161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (257)
T PRK12744 161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEA--VAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT 238 (257)
T ss_pred hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccch--hhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence 699999888764 26888999999987654322111100 000000000111111247789999999999998
Q ss_pred CCcc-CCceEEec
Q 021470 209 DPRT-LNRTMYLR 220 (312)
Q Consensus 209 ~~~~-~~~~~~~~ 220 (312)
.... .|..+++.
T Consensus 239 ~~~~~~g~~~~~~ 251 (257)
T PRK12744 239 DGWWITGQTILIN 251 (257)
T ss_pred ccceeecceEeec
Confidence 5432 35666665
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=121.25 Aligned_cols=202 Identities=12% Similarity=0.091 Sum_probs=128.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..++++||||+|+||.+++++|+++|++|++++|+ +++.+.+ +.+. ..++.++.+|+++++++.++++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART-----ESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999998 4333221 2222 3467889999999998887665
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH-----hCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE-----AGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~-----~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++..... ..|+....++++++.. .+ ..++|. |+..... +..+.
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~-----~~~~~ 157 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRL-----AGRGF 157 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccC-----CCCCC
Confidence 689999999853321 1567778888888764 23 456665 4432211 11223
Q ss_pred CchhhhHHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
..|..+|..++.+.+. .++.++.+.||.+........... ......+.. ......+...+|+|++++.
T Consensus 158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~va~~~~~ 231 (263)
T PRK07814 158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN-----DELRAPMEK-ATPLRRLGDPEDIAAAAVY 231 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC-----HHHHHHHHh-cCCCCCCcCHHHHHHHHHH
Confidence 4566699998888764 245677788887754433211000 000000000 0111234678999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.... ..+..+.+.
T Consensus 232 l~~~~~~~~~g~~~~~~ 248 (263)
T PRK07814 232 LASPAGSYLTGKTLEVD 248 (263)
T ss_pred HcCccccCcCCCEEEEC
Confidence 987542 234555554
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=119.54 Aligned_cols=184 Identities=13% Similarity=0.124 Sum_probs=121.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|++++||||+|.+|+.+++.|+++|++|++++|+ +++.+.+ +.+. ..++.++++|++|++++.++++
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARS-----QDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 4333221 2221 2467889999999998877765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+....+++++ +++.+ ..++|+ |+...... ..+...
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~ 154 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNA-----FPQWGA 154 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcC-----CCCccH
Confidence 489999999864311 1344444444444 44455 567775 44322111 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++++++||.+........ ...... ....++..+|+|+++..+
T Consensus 155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----------~~~~~~----~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 155 YCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----------TVQADF----DRSAMLSPEQVAQTILHL 220 (241)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc----------cccccc----ccccCCCHHHHHHHHHHH
Confidence 55599888766542 489999999998764432110 000000 012457899999999999
Q ss_pred hcCCc
Q 021470 207 INDPR 211 (312)
Q Consensus 207 l~~~~ 211 (312)
+.++.
T Consensus 221 ~~~~~ 225 (241)
T PRK07454 221 AQLPP 225 (241)
T ss_pred HcCCc
Confidence 98774
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.5e-15 Score=121.32 Aligned_cols=199 Identities=11% Similarity=0.026 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||++++++|+++|++|+++.|+. . . ....++..+++|+.|++++.++++ +
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-------~---~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-------L---T-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-------h---h-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999973 0 1 114568899999999999888775 3
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.....+++++.. .+ ..++++ |+.+... +..+...|..
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~-----~~~~~~~Y~~ 150 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHV-----PRIGMAAYGA 150 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhcc-----CCCCCchhHH
Confidence 79999999875421 1455666667777643 33 456665 5543321 1122344555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe----eEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS----VVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..++.+.+. .++++++++||.+.+........... ..... ............+++++|+|++++.
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDED--GEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchh--hhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHH
Confidence 99988777643 57889999999987764332111000 00000 0001111223467899999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.... ..+..+.+.
T Consensus 229 l~~~~~~~~~g~~i~~~ 245 (252)
T PRK08220 229 LASDLASHITLQDIVVD 245 (252)
T ss_pred HhcchhcCccCcEEEEC
Confidence 987542 234455554
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=120.45 Aligned_cols=205 Identities=13% Similarity=0.089 Sum_probs=124.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||++++++|+++|++|++++|+. ......+.+. ..++.++++|++|++++.++++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-----LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF 82 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-----HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999972 2222222332 2356788999999888777665
Q ss_pred -cCCEEEEcCCCCcc-c--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI-R--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . ..|+.. .+.++..+++.+ ..++|+ |+...... +..+
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-------~~~~ 154 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGI-------NRVP 154 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCC-------CCCc
Confidence 58999999974311 0 133333 345556565555 566765 54332111 1245
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe-eE-E---eCCCCcceeeeeHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS-VV-L---LGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~v~~~D~a~ 201 (312)
|..+|..++.+.+. .++++..++||.+.................... .. . .........+.+++|+|+
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 234 (260)
T PRK12823 155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVA 234 (260)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHH
Confidence 66699998877653 378899999999876531100000000000000 00 0 000111123457899999
Q ss_pred HHHHHhcCCc--cCCceEEec
Q 021470 202 YTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~ 220 (312)
++..++.... ..+..+++.
T Consensus 235 ~~~~l~s~~~~~~~g~~~~v~ 255 (260)
T PRK12823 235 AILFLASDEASYITGTVLPVG 255 (260)
T ss_pred HHHHHcCcccccccCcEEeec
Confidence 9999887642 235666664
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.5e-15 Score=121.24 Aligned_cols=200 Identities=13% Similarity=0.099 Sum_probs=126.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
++++++|+||+|+||.++++.|++.|++|+++ .|+ +++... ...+. ..++.++.+|++|++++.++++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDIN-----EEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIV 78 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999999998 887 333221 12221 3457889999999998888775
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++..... ..|+....++++++.. .+ ..++|+ |+.+..... ...
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~-----~~~ 152 (247)
T PRK05565 79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGA-----SCE 152 (247)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCC-----CCc
Confidence 689999999875321 1455555556655543 34 456665 543322211 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|...+.+++. .+++++.++||.+............ .. . +........+...+|++++++
T Consensus 153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~----~~-~---~~~~~~~~~~~~~~~va~~~~ 224 (247)
T PRK05565 153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEED----KE-G---LAEEIPLGRLGKPEEIAKVVL 224 (247)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHH----HH-H---HHhcCCCCCCCCHHHHHHHHH
Confidence 3455588776655542 4789999999987654432221100 00 0 000011234568899999999
Q ss_pred HHhcCCc--cCCceEEec
Q 021470 205 KAINDPR--TLNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~ 220 (312)
.++.... ..++.+++.
T Consensus 225 ~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 225 FLASDDASYITGQIITVD 242 (247)
T ss_pred HHcCCccCCccCcEEEec
Confidence 9997643 235555554
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-14 Score=121.31 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=129.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||.++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARK-----AEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 4333221 2222 2357789999999998876654
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh-----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA-----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~-----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+....++++++... + ..++|+ |+.+..... .....+..
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~-~~~~~~~~ 164 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGN-PPEVMDTI 164 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC-CccccCcc
Confidence 579999999864211 16677788888887654 4 567775 543222111 00011234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+++. .++.+..++|+.+............ . ... . .......+...+|+++.+..
T Consensus 165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~---~--~~~--~-~~~~~~~~~~~~~va~~~~~ 236 (259)
T PRK08213 165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERL---G--EDL--L-AHTPLGRLGDDEDLKGAALL 236 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHH---H--HHH--H-hcCCCCCCcCHHHHHHHHHH
Confidence 566699998887764 3677888999887544322111100 0 000 0 01111124468999999888
Q ss_pred HhcCCc-c-CCceEEec
Q 021470 206 AINDPR-T-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~ 220 (312)
++.... . .|..+.+.
T Consensus 237 l~~~~~~~~~G~~~~~~ 253 (259)
T PRK08213 237 LASDASKHITGQILAVD 253 (259)
T ss_pred HhCccccCccCCEEEEC
Confidence 886542 2 35566664
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.4e-15 Score=137.66 Aligned_cols=208 Identities=14% Similarity=0.039 Sum_probs=133.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-CCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-QGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|++.|++|++++|+ +++.+.. ..+.. .++.++.+|++|++++.++++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~-----~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLD-----EEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998 4443222 22221 378899999999998887765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCC-ceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNV-KRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v-~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+.+..++++++. +.+ . .++|+ |+....... .....
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~~~~-----~~~~~ 570 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAVNPG-----PNFGA 570 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCccccCCC-----CCcHH
Confidence 689999999964421 156666677766554 333 3 45664 543322111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEeccccc-cc-ccccCCCCCccCCCCCee----EEeCCCCcceeeeeHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFA-GY-FLGGLCQPGSILPSKDSV----VLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~-~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~D~a 200 (312)
|..+|..++.+++. .++++.+++|+.++ +. +.............+... ..+..+.....+++++|+|
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA 650 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVA 650 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHH
Confidence 55599998888764 35888999999985 22 111110000000000000 1233344556789999999
Q ss_pred HHHHHHhc--CCccCCceEEecC
Q 021470 201 MYTMKAIN--DPRTLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~--~~~~~~~~~~~~~ 221 (312)
+++..++. .....|.++++.|
T Consensus 651 ~a~~~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 651 EAVVFLASGLLSKTTGAIITVDG 673 (681)
T ss_pred HHHHHHhCccccCCcCCEEEECC
Confidence 99999985 3334567778764
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=123.30 Aligned_cols=213 Identities=9% Similarity=0.039 Sum_probs=132.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+.. +.+..+.+. ..++.++.+|+++++++.++++
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAP-----DDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChh-----hHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 479999999999999999999999999999999843 222222222 3468899999999999888775
Q ss_pred -cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHHH---hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR-------------SHQILLQLKLVDAIKE---AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~---~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|+|||+++..... ..|+....++.+++.. .+ ..++++ |+...... ..+...|..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~-----~~~~~~Y~~ 155 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTG-----QGGTSGYAA 155 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccC-----CCCCchhHH
Confidence 579999999854311 1345555556665543 22 346665 44332211 112345555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-EEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-VLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+|..++.+.+. .+++++.++||.+.+........... ...... ...........++..+|+|++++.++.
T Consensus 156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (258)
T PRK08628 156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFD--DPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS 233 (258)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhcc--CHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC
Confidence 99998877763 37889999999988764332111000 000000 000000000146789999999999997
Q ss_pred CCc--cCCceEEecCCCCcCCHHH
Q 021470 209 DPR--TLNRTMYLRPPKNILSQRE 230 (312)
Q Consensus 209 ~~~--~~~~~~~~~~~~~~~s~~e 230 (312)
.+. ..+..+.+.| + ...+++
T Consensus 234 ~~~~~~~g~~~~~~g-g-~~~~~~ 255 (258)
T PRK08628 234 ERSSHTTGQWLFVDG-G-YVHLDR 255 (258)
T ss_pred hhhccccCceEEecC-C-cccccc
Confidence 652 3355666643 3 444443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.7e-15 Score=120.60 Aligned_cols=179 Identities=17% Similarity=0.210 Sum_probs=121.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
||+++||||+|+||.++++.|+++|++|++++|+ +++.+. .+.+ ...+++++++|+.|++++.++++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARD-----VERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA 75 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh
Confidence 4699999999999999999999999999999998 333321 1222 13468899999999998888766
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
.+|++||+++..... ..|+.+..++++++.. .+ ..++++ |+....... .....|.
T Consensus 76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~ 149 (243)
T PRK07102 76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGR-----ASNYVYG 149 (243)
T ss_pred cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCC-----CCCcccH
Confidence 469999999864321 1456666666666554 34 566765 443221111 1123566
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++..++|+.+......... . . .....+.+|+++.+...+.
T Consensus 150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~-----------~--~-----~~~~~~~~~~a~~i~~~~~ 211 (243)
T PRK07102 150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK-----------L--P-----GPLTAQPEEVAKDIFRAIE 211 (243)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC-----------C--C-----ccccCCHHHHHHHHHHHHh
Confidence 699887666543 4788999999988765322100 0 0 1135679999999999998
Q ss_pred CC
Q 021470 209 DP 210 (312)
Q Consensus 209 ~~ 210 (312)
++
T Consensus 212 ~~ 213 (243)
T PRK07102 212 KG 213 (243)
T ss_pred CC
Confidence 76
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-14 Score=120.88 Aligned_cols=202 Identities=12% Similarity=0.067 Sum_probs=128.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|.||++++++|++.|++|.++.|+.. ++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE----EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR 77 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 479999999999999999999999999998876532 2221 112222 3468899999999988877664
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC----CCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG----NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~----~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.....+++++...- .-.++|+ |+.... .+..+...
T Consensus 78 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----~~~~~~~~ 152 (256)
T PRK12743 78 LGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----TPLPGASA 152 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----CCCCCcch
Confidence 579999999864421 156667777777766532 1236665 543321 12223345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+++. .+++++.++||.+........... ....... .-....+.+.+|+++++..+
T Consensus 153 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~----~~~~~~~----~~~~~~~~~~~dva~~~~~l 224 (256)
T PRK12743 153 YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSD----VKPDSRP----GIPLGRPGDTHEIASLVAWL 224 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChH----HHHHHHh----cCCCCCCCCHHHHHHHHHHH
Confidence 66699988777653 478899999998876543211000 0000000 00111245889999999998
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|..+.+.|
T Consensus 225 ~~~~~~~~~G~~~~~dg 241 (256)
T PRK12743 225 CSEGASYTTGQSLIVDG 241 (256)
T ss_pred hCccccCcCCcEEEECC
Confidence 87643 2355666653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-14 Score=119.70 Aligned_cols=180 Identities=16% Similarity=0.159 Sum_probs=121.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccC-CCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQ-GAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~-~~~~v~~D~~d~~~l~~~~~------ 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+ +++.... +.+... ++.++++|++|++++.++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 76 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARR-----TDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH 76 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 3799999999999999999999999999999998 4444322 222211 68899999999999888765
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
.+|++||+++..... +.|+.+..++++ ++++.+ ..++|. ||....... .....
T Consensus 77 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~ 150 (257)
T PRK07024 77 GLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGL-----PGAGA 150 (257)
T ss_pred CCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC-----CCCcc
Confidence 379999999864310 145555555444 555555 567774 432221111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .+++++.++||.+..+...... .. .-.+++.+|+++.+..+
T Consensus 151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------~~----~~~~~~~~~~a~~~~~~ 212 (257)
T PRK07024 151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--------------YP----MPFLMDADRFAARAARA 212 (257)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--------------CC----CCCccCHHHHHHHHHHH
Confidence 55599998877643 4799999999988654321100 00 00135799999999999
Q ss_pred hcCCc
Q 021470 207 INDPR 211 (312)
Q Consensus 207 l~~~~ 211 (312)
+.+++
T Consensus 213 l~~~~ 217 (257)
T PRK07024 213 IARGR 217 (257)
T ss_pred HhCCC
Confidence 97653
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.9e-15 Score=121.53 Aligned_cols=187 Identities=16% Similarity=0.064 Sum_probs=122.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
|++++||||+|+||+++++.|+++|++|++++|+ +++.+.+ ..+...+++++++|+.|.+++.++++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDIN-----EAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 4444322 22334578999999999988887765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+....++++++.. .+ ..++|+ |+....... .....|
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y 149 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQ-----PGLAVY 149 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCC-----CCchhh
Confidence 469999999875421 1566667777776643 33 456654 443221111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .+++++.++||.+........... . ..... ......+..+|+|++++.++
T Consensus 150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~----~---~~~~~---~~~~~~~~~~~va~~~~~~~ 219 (260)
T PRK08267 150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE----V---DAGST---KRLGVRLTPEDVAEAVWAAV 219 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccch----h---hhhhH---hhccCCCCHHHHHHHHHHHH
Confidence 5599888766653 468899999998765433210000 0 00000 00112356799999999998
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
.++
T Consensus 220 ~~~ 222 (260)
T PRK08267 220 QHP 222 (260)
T ss_pred hCC
Confidence 654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-14 Score=121.19 Aligned_cols=206 Identities=12% Similarity=0.082 Sum_probs=128.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||++++++|++.|++|++++|+ .++.+ ..+.+. ..++.++++|+.|++++.++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ-----DDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999987 32222 112222 2368899999999999888776
Q ss_pred -cCCEEEEcCCCCccc----------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHIR----------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... ..|+.+..++++++... + -.++++ |+....... ....
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-----~~~~ 166 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGG-----LGPH 166 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccC-----CCCc
Confidence 589999999864210 15677777777776542 2 234443 432221111 1123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee----EEeCCCC-cceeeeeHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV----VLLGDGN-PKAIYVDEDDIA 200 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~v~~~D~a 200 (312)
.|..+|..++.+.+. .++.+..++||.+............. ...... ....... .....++++|+|
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~dva 244 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDE--RTEDALAGFRAFAGKNANLKGVELTVDDVA 244 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccccc--chhhhhhhhHHHhhcCCCCcCCCCCHHHHH
Confidence 566699998887764 36788889999876543211100000 000000 0000000 012347899999
Q ss_pred HHHHHHhcCCc-c-CCceEEecC
Q 021470 201 MYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
+++..++..+. . .|..+.+.|
T Consensus 245 ~~~~~l~s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 245 NAVLFLASDEARYISGLNLMIDG 267 (280)
T ss_pred HHHHhhcCcccccccCcEEEECC
Confidence 99999987643 2 356667754
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.7e-14 Score=121.77 Aligned_cols=204 Identities=12% Similarity=0.070 Sum_probs=130.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||.+++++|+++|++|+++.|+......... ..+. ..++.++.+|+.|.+.+.++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETK---QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH---HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999887432111111 2222 2357789999999988887765
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh-CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA-GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~-~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|+|||+++..... ..|+....++++++... ..-.++|+ |+....... .....|..
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~-----~~~~~Y~~ 197 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN-----ETLIDYSA 197 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC-----CCcchhHH
Confidence 579999999864210 15677788888887653 10235665 443322111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+++. .++++..++||.+.......... ......+........+.+++|+|+++..++..
T Consensus 198 sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~ 270 (290)
T PRK06701 198 TKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-------EEKVSQFGSNTPMQRPGQPEELAPAYVFLASP 270 (290)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-------HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc
Confidence 99988777653 37888999999876553321100 00000011112223578899999999999986
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..+..+.+.|
T Consensus 271 ~~~~~~G~~i~idg 284 (290)
T PRK06701 271 DSSYITGQMLHVNG 284 (290)
T ss_pred ccCCccCcEEEeCC
Confidence 53 2355666653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=119.91 Aligned_cols=205 Identities=15% Similarity=0.142 Sum_probs=126.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.... +.+ ...+.++++|+.|.+++.++++
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRD-----PASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFG 79 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4799999999999999999999999999999987 3333211 222 3457789999999877766543
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeecCCCCCCcccccccCCCCCchhhhH
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLPSEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
++|++||+++..... ..|+..+.++++++... ...+.++.++....... .....|..+|
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-----~~~~~Y~~sK 154 (249)
T PRK06500 80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-----PNSSVYAASK 154 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-----CCccHHHHHH
Confidence 689999999864321 16677888899888742 21233444442221111 1123455599
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
...+.+++. .++++.+++||.+..++......... .................+.+.+|+|+++..++.++.
T Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~ 232 (249)
T PRK06500 155 AALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEA--TLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDES 232 (249)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCcc--chHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 998888743 37889999999887654321100000 000000000000011124588999999999887543
Q ss_pred --cCCceEEec
Q 021470 212 --TLNRTMYLR 220 (312)
Q Consensus 212 --~~~~~~~~~ 220 (312)
..+..+.+.
T Consensus 233 ~~~~g~~i~~~ 243 (249)
T PRK06500 233 AFIVGSEIIVD 243 (249)
T ss_pred cCccCCeEEEC
Confidence 124444443
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=122.03 Aligned_cols=190 Identities=14% Similarity=0.088 Sum_probs=122.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|+|+||||+|+||+++++.|+++|++|++++|+ .++.+ ....+. ..++.++++|+.|++++.++++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVN-----EEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW 75 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999999997 33332 112222 3467889999999988887765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+... +.++..+++.+ ..++|+ |+...... ......|
T Consensus 76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~-----~~~~~~Y 149 (270)
T PRK05650 76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQ-----GPAMSSY 149 (270)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCC-----CCCchHH
Confidence 689999999865421 1333333 44555566666 667775 44322111 1122345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++.+++++||.+..++........ ..............+++++|+|+.++..+
T Consensus 150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~vA~~i~~~l 223 (270)
T PRK05650 150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN------PAMKAQVGKLLEKSPITAADIADYIYQQV 223 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc------hhHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 5599886655432 4788999999998776543221110 00000000001124679999999999999
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
.++
T Consensus 224 ~~~ 226 (270)
T PRK05650 224 AKG 226 (270)
T ss_pred hCC
Confidence 875
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-14 Score=119.74 Aligned_cols=149 Identities=19% Similarity=0.176 Sum_probs=104.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
|++++||||+|++|+++++.|+++|++|++++|+ .++. +.+...+++++.+|+.|++++.++++ +
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 72 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARK-----AEDV---EALAAAGFTAVQLDVNDGAALARLAEELEAEHGG 72 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999998 4443 22334568899999999988877664 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH---hCCCceeec-CC-CCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE---AGNVKRFLP-SE-FGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~---~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|+|||+++..... ..|+.+..++++++.. .+ ..++|. |+ .+.... .....|..
T Consensus 73 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------~~~~~Y~~ 145 (274)
T PRK05693 73 LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT------PFAGAYCA 145 (274)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC------CCccHHHH
Confidence 89999999864321 1556666666666543 22 345554 43 332111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccc
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLG 166 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~ 166 (312)
+|..++.+.+. .|++++.++||.+..++..
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 182 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFAS 182 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccc
Confidence 99987776542 5889999999998765443
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=118.78 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=127.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
..++++||||+|+||++++++|+++|++|++++|+.. .+..+....+ ..++.++++|+++++++.++++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~---~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP---SETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH---HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999998631 1111111222 3467899999999988887664
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... ..|+....++++++... +...++|+ |+....... .....|.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~~~Y~ 154 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-----IRVPSYT 154 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-----CCCchhH
Confidence 589999999864311 15666666777776532 21235554 442211111 1123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .+++++.++||.+........... ......... ......++..+|+|++++.++.
T Consensus 155 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s 228 (248)
T TIGR01832 155 ASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-----EDRNAAILE-RIPAGRWGTPDDIGGPAVFLAS 228 (248)
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-----hHHHHHHHh-cCCCCCCcCHHHHHHHHHHHcC
Confidence 599998877653 378899999998876533211100 000000000 0112367899999999999997
Q ss_pred CCcc--CCceEEec
Q 021470 209 DPRT--LNRTMYLR 220 (312)
Q Consensus 209 ~~~~--~~~~~~~~ 220 (312)
.... .|..+.+.
T Consensus 229 ~~~~~~~G~~i~~d 242 (248)
T TIGR01832 229 SASDYVNGYTLAVD 242 (248)
T ss_pred ccccCcCCcEEEeC
Confidence 6432 25555553
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.3e-15 Score=123.08 Aligned_cols=209 Identities=12% Similarity=0.042 Sum_probs=127.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+. .+.+. ...+. ...+.++.+|++|++++.++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 76 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINS-----EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVD 76 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999873 22211 12221 1358899999999988877664
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+..+..+++++.. .+.-.++|+ |+....... ...
T Consensus 77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-----~~~ 151 (259)
T PRK12384 77 EIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS-----KHN 151 (259)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----CCC
Confidence 579999999864321 1456665555555543 331135664 443221111 112
Q ss_pred CchhhhHHHHHHHHH-------HhCCCeEEEeccccccc-ccccCCCCCc-c-C-CCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 132 RVTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGY-FLGGLCQPGS-I-L-PSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~-~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
..|..+|..++.+.+ ..|+++..++||.+.+. .......... . . ........+.++.....+++.+|++
T Consensus 152 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~ 231 (259)
T PRK12384 152 SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231 (259)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHH
Confidence 345559988766554 35799999999976442 1111100000 0 0 0000011112223345678999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.++..++.+.. ..|..+++.|
T Consensus 232 ~~~~~l~~~~~~~~~G~~~~v~~ 254 (259)
T PRK12384 232 NMLLFYASPKASYCTGQSINVTG 254 (259)
T ss_pred HHHHHHcCcccccccCceEEEcC
Confidence 99999987643 2466777754
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=119.51 Aligned_cols=201 Identities=14% Similarity=0.091 Sum_probs=124.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
++++||||+|.||+++++.|++.|++|+++.|+. .+.. +.+...++.++.+|++|++++.++++ ++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~---~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA----ENEA---KELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV 80 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc----HHHH---HHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999887753 2222 22333468899999999998888765 57
Q ss_pred CEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 77 DVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
|++||+++..... +.|+.+. +.++..+++.+ ..++|+ |+...... +......|..+
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~----~~~~~~~Y~as 155 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGT----AAEGTTFYAIT 155 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCC----CCCCccHhHHH
Confidence 9999999864311 1455553 44555555444 456665 43221110 00112335559
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-EEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-VLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
|..++.+.+. .++++..++||.+-.......... ...... ...........+...+|+|++++.++..
T Consensus 156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 231 (255)
T PRK06463 156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ----EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASD 231 (255)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc----cchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcCh
Confidence 9998877653 478888899998754432111000 000000 0000111123456899999999999876
Q ss_pred Cc--cCCceEEec
Q 021470 210 PR--TLNRTMYLR 220 (312)
Q Consensus 210 ~~--~~~~~~~~~ 220 (312)
+. ..|..+.+.
T Consensus 232 ~~~~~~G~~~~~d 244 (255)
T PRK06463 232 DARYITGQVIVAD 244 (255)
T ss_pred hhcCCCCCEEEEC
Confidence 53 235555554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=119.28 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=127.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhcc-------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKL------- 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~------- 75 (312)
++++||||+|+||+++++.|++.|++|++..++. +.+.+.+ ..+ ..++.++++|+.|++++.++++.
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQS----EDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999998876642 2222211 222 24688899999999988887752
Q ss_pred -CCEEEEcCCCCc---------c-----------ccchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCC
Q 021470 76 -VDVVICAISGVH---------I-----------RSHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 76 -~d~v~~~~~~~~---------~-----------~~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
+|++||+++... . ...|+....++++++.. .+ ..++++ |+... ..+..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~-----~~~~~ 154 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLF-----QNPVV 154 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccc-----cCCCC
Confidence 899999997521 0 12566667777777753 33 456665 43221 11223
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
|...|..+|..++.+++. .++.+..++||++........... ..............+.+.+|+|++
T Consensus 155 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~va~~ 227 (253)
T PRK08642 155 PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD-------EVFDLIAATTPLRKVTTPQEFADA 227 (253)
T ss_pred CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH-------HHHHHHHhcCCcCCCCCHHHHHHH
Confidence 345666799999888764 357788889998754322110000 000000001111347899999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
+..++..+. ..|..+.+.|
T Consensus 228 ~~~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 228 VLFFASPWARAVTGQNLVVDG 248 (253)
T ss_pred HHHHcCchhcCccCCEEEeCC
Confidence 999997542 3456666653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.8e-14 Score=118.11 Aligned_cols=184 Identities=15% Similarity=0.153 Sum_probs=121.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~ 75 (312)
.++|+||||+|.||++++++|+++| ++|++++|+.+....+..+.+......+++++++|+.|++++.++++ +
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~ 87 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD 87 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence 4789999999999999999999996 99999999854210111111222222368999999999887665543 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.. .+.+++++++.+ ..++|+ |+...... ..+...|..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~-----~~~~~~Y~~ 161 (253)
T PRK07904 88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERV-----RRSNFVYGS 161 (253)
T ss_pred CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCC-----CCCCcchHH
Confidence 99999988765321 123332 345777777777 677775 55332111 112234555
Q ss_pred hHHHHHHHH-------HHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAI-------EDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~-------~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..+..+. +..++++++++||.+...+.... .. . ...++.+|+|+.++..+.+
T Consensus 162 sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------~~---------~--~~~~~~~~~A~~i~~~~~~ 222 (253)
T PRK07904 162 TKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------KE---------A--PLTVDKEDVAKLAVTAVAK 222 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------CC---------C--CCCCCHHHHHHHHHHHHHc
Confidence 998876443 34689999999999876533211 00 0 1246899999999999987
Q ss_pred Cc
Q 021470 210 PR 211 (312)
Q Consensus 210 ~~ 211 (312)
++
T Consensus 223 ~~ 224 (253)
T PRK07904 223 GK 224 (253)
T ss_pred CC
Confidence 64
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-14 Score=122.12 Aligned_cols=193 Identities=13% Similarity=0.107 Sum_probs=125.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++|+||||+|.||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~-----~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARG-----EEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 444322 12222 2457789999999998888764
Q ss_pred --cCCEEEEcCCCCcccc--------------chhH----hHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQIL----LQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~----~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++...... .|+. .++.++..+++.+ ..++|+ |+....... .....
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~-----~~~~~ 156 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI-----PLQSA 156 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC-----CcchH
Confidence 6899999998643211 2333 3455666666655 466775 543322111 11234
Q ss_pred hhhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. .++.++.++|+.+..++....... ... ......++...+|+|++++
T Consensus 157 Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~----~~~-------~~~~~~~~~~pe~vA~~i~ 225 (334)
T PRK07109 157 YCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR----LPV-------EPQPVPPIYQPEVVADAIL 225 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh----ccc-------cccCCCCCCCHHHHHHHHH
Confidence 55599887665442 257889999998765543211100 000 0011224568999999999
Q ss_pred HHhcCCccCCceEEec
Q 021470 205 KAINDPRTLNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~ 220 (312)
.++.++ ...+++.
T Consensus 226 ~~~~~~---~~~~~vg 238 (334)
T PRK07109 226 YAAEHP---RRELWVG 238 (334)
T ss_pred HHHhCC---CcEEEeC
Confidence 999876 3455663
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-14 Score=118.56 Aligned_cols=200 Identities=13% Similarity=0.084 Sum_probs=127.3
Q ss_pred EEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc---cCCEEEE
Q 021470 7 LIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK---LVDVVIC 81 (312)
Q Consensus 7 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~---~~d~v~~ 81 (312)
+||||+|++|+++++.|+++|++|++++|+ +++.... ..+. ..+++++.+|++|++++.++++ ++|++||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRS-----RDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 599999999999999999999999999998 4443221 2221 3468899999999999999887 4799999
Q ss_pred cCCCCccc--------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHH
Q 021470 82 AISGVHIR--------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIE 146 (312)
Q Consensus 82 ~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~ 146 (312)
+++..... ..|+....+++++....+ ..++|+ |+.+.... ..+...|..+|..++.+.+
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~-----~~~~~~Y~~sK~a~~~~~~ 149 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRP-----SASGVLQGAINAALEALAR 149 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCC-----CCcchHHHHHHHHHHHHHH
Confidence 99864321 145666677777555544 567775 54333211 1222345559999988876
Q ss_pred Hh-----CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021470 147 DA-----GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 147 ~~-----~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
.. +++++.+.||.+..+......... ...........-....+...+|+|+++..++..+...|+.+.+.|
T Consensus 150 ~la~e~~~irv~~i~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 225 (230)
T PRK07041 150 GLALELAPVRVNTVSPGLVDTPLWSKLAGDA----REAMFAAAAERLPARRVGQPEDVANAILFLAANGFTTGSTVLVDG 225 (230)
T ss_pred HHHHHhhCceEEEEeecccccHHHHhhhccc----hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence 52 456777788876554322111100 000000000000011234679999999999987644567777754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-14 Score=117.98 Aligned_cols=200 Identities=9% Similarity=0.058 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|++.|++|++++|+... ...+..+++|++|++++.++++ +
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 72 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISKYGR 72 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999997321 1267889999999988888765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.+...+++++.. .+ ..++|+ |+..... +..+...|..
T Consensus 73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~~ 146 (258)
T PRK06398 73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFA-----VTRNAAAYVT 146 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhcc-----CCCCCchhhh
Confidence 89999999864311 1566666666666543 34 456765 5533221 1122345666
Q ss_pred hHHHHHHHHHHh------CCCeEEEecccccccccccCCCCCc-cCCC--CCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 137 DKMVVRKAIEDA------GIPFTYVSANCFAGYFLGGLCQPGS-ILPS--KDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 137 ~K~~~e~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+|..++.+.+.. ++.+..++||.+............. .... ......+........+...+|+|+++..++
T Consensus 147 sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~ 226 (258)
T PRK06398 147 SKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLA 226 (258)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHc
Confidence 999988887642 3667788899876543322110000 0000 000000111111224567999999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|..+.+.|
T Consensus 227 s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 227 SDLASFITGECVTVDG 242 (258)
T ss_pred CcccCCCCCcEEEECC
Confidence 7542 2355566643
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-14 Score=119.22 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=121.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ...+.++++|+.|.+++.++++
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~-----~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARR-----EDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 4443222 2222 2356789999999998888876
Q ss_pred --cCCEEEEcCCCCccc----------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIR----------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||++|..... ..|+.+..+++++ +++.+ ..++|+ |+.+.... +....
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~p~~ 189 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSE----ASPLF 189 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCC----CCCCc
Confidence 689999999864311 1344444444444 44555 567775 55443211 11112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .+++++.++||.+-........ . .. ....++.+++|+.++
T Consensus 190 ~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-------~-------~~---~~~~~~pe~vA~~~~ 252 (293)
T PRK05866 190 SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-------A-------YD---GLPALTADEAAEWMV 252 (293)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-------c-------cc---CCCCCCHHHHHHHHH
Confidence 3465699998776553 4788889999976544322100 0 00 123468999999999
Q ss_pred HHhcCC
Q 021470 205 KAINDP 210 (312)
Q Consensus 205 ~~l~~~ 210 (312)
.++.+.
T Consensus 253 ~~~~~~ 258 (293)
T PRK05866 253 TAARTR 258 (293)
T ss_pred HHHhcC
Confidence 999865
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=119.32 Aligned_cols=207 Identities=12% Similarity=0.089 Sum_probs=126.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+. ...+..+.+. ..++.++++|+.+++++.++++
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISP-----EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH-----HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999873 2222222222 2357789999999988888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.....+++++.. .+ ..++|+ |+ .+.... ......
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~~ 154 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVA-----DPGETA 154 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccC-----CCCcch
Confidence 579999999964321 1456666777776553 33 456664 43 221111 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+................................+...+|+|+++..+
T Consensus 155 Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l 234 (263)
T PRK08226 155 YALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFL 234 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Confidence 55599988877653 36888899999887654332111000000000000000011112356899999999888
Q ss_pred hcCC-cc-CCceEEec
Q 021470 207 INDP-RT-LNRTMYLR 220 (312)
Q Consensus 207 l~~~-~~-~~~~~~~~ 220 (312)
+... .. .++.+.+.
T Consensus 235 ~~~~~~~~~g~~i~~d 250 (263)
T PRK08226 235 ASDESSYLTGTQNVID 250 (263)
T ss_pred cCchhcCCcCceEeEC
Confidence 8643 22 34555554
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.6e-14 Score=117.92 Aligned_cols=203 Identities=11% Similarity=0.045 Sum_probs=126.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+.... .....+.+. ..++.++++|+.|.+++.++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA---ADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHH---HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999998887763211 111112222 3467889999999998888876
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
++|++||+++..... ..|+....++++++...- ...++++ |+.+... +..+...|..+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----~~~~~~~Y~~s 156 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL-----PLPGYGPYAAS 156 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----CCCCCchhHHH
Confidence 589999999864321 156667777777776542 0235665 4433221 11223456669
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..++.+++. .++.++.++||++........... .....+........+.+++|+++++..++..+
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 229 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA-------EQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD 229 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH-------HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 9998877753 367788899987654432110000 00000001111123557899999999998765
Q ss_pred c-c-CCceEEec
Q 021470 211 R-T-LNRTMYLR 220 (312)
Q Consensus 211 ~-~-~~~~~~~~ 220 (312)
. . .+..+++.
T Consensus 230 ~~~~~g~~~~~~ 241 (245)
T PRK12937 230 GAWVNGQVLRVN 241 (245)
T ss_pred ccCccccEEEeC
Confidence 3 2 24555554
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=119.97 Aligned_cols=206 Identities=10% Similarity=-0.008 Sum_probs=127.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhh--ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSF--KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l--~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|++.|++|+++.|+.. ++.+ ....+ ...++.++.+|++|.+++.++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR----DEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999998877532 1211 11222 13457889999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC---CCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG---NVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~---~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+....++++++.... .-.+++. ++..... +.+....|
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~-----~~p~~~~Y 159 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN-----LNPDFLSY 159 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC-----CCCCchHH
Confidence 479999999864321 156777778877776532 0234443 3211100 11112345
Q ss_pred hhhHHHHHHHHHHh------CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 135 FDDKMVVRKAIEDA------GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 135 ~~~K~~~e~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
..+|..++.+.+.. ++.++.++||.+........... . ....... .....+++|+|+++..+++
T Consensus 160 ~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~--~~~~~~~----~~~~~~~~d~a~~~~~~~~ 229 (258)
T PRK09134 160 TLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF----A--RQHAATP----LGRGSTPEEIAAAVRYLLD 229 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH----H--HHHhcCC----CCCCcCHHHHHHHHHHHhc
Confidence 56998888776641 36778889987654321100000 0 0000000 1124679999999999998
Q ss_pred CCccCCceEEecCCCCcCCH
Q 021470 209 DPRTLNRTMYLRPPKNILSQ 228 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~s~ 228 (312)
.+...++.+++.|. ..+++
T Consensus 230 ~~~~~g~~~~i~gg-~~~~~ 248 (258)
T PRK09134 230 APSVTGQMIAVDGG-QHLAW 248 (258)
T ss_pred CCCcCCCEEEECCC-eeccc
Confidence 77555677777543 34444
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.2e-14 Score=114.54 Aligned_cols=178 Identities=13% Similarity=0.069 Sum_probs=124.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc----CCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL----VDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~----~d~ 78 (312)
|++++||||+|+||++++++|+++|++|++++|+ +++.+.+... ..++.++++|++|++++.++++. .|.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~ 74 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRN-----QSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPFIPEL 74 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence 4689999999999999999999999999999998 5554332221 24688999999999999998874 588
Q ss_pred EEEcCCCCcc--------------ccchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 79 VICAISGVHI--------------RSHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 79 v~~~~~~~~~--------------~~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
++|+++.... -..|+.+..++++++... + -.++|. |+....... .....|..+|..+
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~Y~asK~a~ 148 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASELAL-----PRAEAYGASKAAV 148 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhccCC-----CCCchhhHHHHHH
Confidence 8888874321 125677788888888753 2 234553 443322111 1123566699998
Q ss_pred HHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 142 RKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 142 e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
+.+.+ ..+++++.++||.+.+....... . .. ...++.+|+++.+...++..
T Consensus 149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----------~------~~-~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----------F------AM-PMIITVEQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----------C------CC-CcccCHHHHHHHHHHHHhcC
Confidence 87764 35789999999998765322100 0 00 02468999999999999875
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.1e-14 Score=116.87 Aligned_cols=200 Identities=10% Similarity=0.040 Sum_probs=126.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +.+.... +.+ ..++.++++|+.|.+++.++++
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD-----RERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999999999887 3333221 222 3467899999999988766554
Q ss_pred cCCEEEEcCCCCccc----------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR----------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... ..|+..+.++++++... +...++|+ |+....... .....|.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----~~~~~Y~ 158 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----PDTEAYA 158 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----CCCcchH
Confidence 479999999865321 16777888899888642 10235554 543322111 1123566
Q ss_pred hhHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 136 DDKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 136 ~~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
.+|..++.+.+. . ++++..++||.+............. ... .........+.+.+|++.++..++..
T Consensus 159 ~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~va~~~~~l~~~ 231 (255)
T PRK05717 159 ASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPL--SEA-----DHAQHPAGRVGTVEDVAAMVAWLLSR 231 (255)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHH--HHH-----HhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 699998877764 2 4677888999876643211000000 000 00001112456889999999988865
Q ss_pred Cc--cCCceEEec
Q 021470 210 PR--TLNRTMYLR 220 (312)
Q Consensus 210 ~~--~~~~~~~~~ 220 (312)
.. ..|..+.+.
T Consensus 232 ~~~~~~g~~~~~~ 244 (255)
T PRK05717 232 QAGFVTGQEFVVD 244 (255)
T ss_pred hhcCccCcEEEEC
Confidence 42 235555554
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-14 Score=117.61 Aligned_cols=203 Identities=10% Similarity=0.066 Sum_probs=125.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|+||.+++++|+++|++|+...++. +++.+ ....+. ..++.++++|++|.+++.++++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRN----RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC----HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999888776442 22222 112222 2357789999999998888775
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC-----CC-ceeec-CCCCCCcccccccCCCC
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG-----NV-KRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~-----~v-~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++..... ..|+....++++++...- .. .++++ |+.+..... + ...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---~-~~~ 154 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS---P-GEY 154 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC---C-CCc
Confidence 579999999875321 155666777777765531 01 13444 543322111 0 001
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+++. .+++++++||+.+.+.............. ........-+.+++|+++++.
T Consensus 155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~-------~~~~~p~~~~~~~~d~a~~~~ 227 (248)
T PRK06123 155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDR-------VKAGIPMGRGGTAEEVARAIL 227 (248)
T ss_pred cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHH-------HHhcCCCCCCcCHHHHHHHHH
Confidence 2466699998877653 37999999999987764321111000000 000000111247899999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.... ..+..|++.|
T Consensus 228 ~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 228 WLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred HHhCccccCccCCEEeecC
Confidence 9887642 2356677653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.2e-14 Score=116.32 Aligned_cols=201 Identities=12% Similarity=0.116 Sum_probs=128.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||++++++|++.|++|++++|+ +++.+ ..+.+. ..++..+.+|++|++++.++++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDIT-----AERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 33332 122332 2356788999999998888764
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.....+++++.. .+ ..++|+ |+...... ..+...
T Consensus 84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~ 157 (254)
T PRK08085 84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELG-----RDTITP 157 (254)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccC-----CCCCcc
Confidence 479999999864311 1455555555665543 34 456765 54332111 122345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||++........... .. .............+...+|++.++..+
T Consensus 158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-----~~-~~~~~~~~~p~~~~~~~~~va~~~~~l 231 (254)
T PRK08085 158 YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-----EA-FTAWLCKRTPAARWGDPQELIGAAVFL 231 (254)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-----HH-HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 66699998877764 478899999998876543321110 00 000000111123467899999999999
Q ss_pred hcCCc-c-CCceEEec
Q 021470 207 INDPR-T-LNRTMYLR 220 (312)
Q Consensus 207 l~~~~-~-~~~~~~~~ 220 (312)
+.... . .|..+.+.
T Consensus 232 ~~~~~~~i~G~~i~~d 247 (254)
T PRK08085 232 SSKASDFVNGHLLFVD 247 (254)
T ss_pred hCccccCCcCCEEEEC
Confidence 87542 2 34555554
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.2e-14 Score=115.16 Aligned_cols=172 Identities=16% Similarity=0.094 Sum_probs=120.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~ 78 (312)
.++++||||+|++|+++++.|+++|+ +|++++|+ +++.+. ...++.++.+|+.|++++.++++ .+|+
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~-----~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-----PESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecC-----hhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 36899999999999999999999998 99999998 333311 24578899999999999988876 4899
Q ss_pred EEEcCCCCc-cc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 79 VICAISGVH-IR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 79 v~~~~~~~~-~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
|||+++... .. ..|+....++++++. ..+ ..++++ |+...... ..+...|..+|
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~-----~~~~~~y~~sK 150 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVN-----FPNLGTYSASK 150 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccC-----CCCchHhHHHH
Confidence 999998722 10 145666777777755 344 566775 44332111 12224556699
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
..++.+.+. .++++++++|+.+....... .....+..+|+++.++..+..+
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~---------------------~~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG---------------------LDAPKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc---------------------CCcCCCCHHHHHHHHHHHHhCC
Confidence 988776653 37889999998764332110 0012578899999999888764
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-14 Score=117.21 Aligned_cols=202 Identities=12% Similarity=0.092 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
+++++||||+|++|+++++.|+++|++|+++.|+... ........+ ....+.++.+|+.|.+++.++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE 78 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3689999999999999999999999999999998421 111111111 12358899999999998888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+....++ ++++++.+ ..++|+ |+.+..... .....|
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----~~~~~Y 152 (245)
T PRK12824 79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQ-----FGQTNY 152 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCC-----CCChHH
Confidence 489999999865321 1455555554 55556556 667776 554332111 112234
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++++++|+.+........... ....+........+...+|+++++..++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~va~~~~~l~ 224 (245)
T PRK12824 153 SAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE--------VLQSIVNQIPMKRLGTPEEIAAAVAFLV 224 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 4499877666543 478889999998876533211100 0000000111224567899999998888
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|+.+++.|
T Consensus 225 ~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 225 SEAAGFITGETISING 240 (245)
T ss_pred CccccCccCcEEEECC
Confidence 6532 2366777753
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.7e-14 Score=116.67 Aligned_cols=201 Identities=14% Similarity=0.177 Sum_probs=127.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+ +++.+ ....+. ..++.++.+|++|++++.++++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRN-----AATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999998 33322 112222 3458899999999998887765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+....++++++ .+.+ ..++|+ |+....... .....
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-----~~~~~ 159 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR-----AGDAV 159 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC-----CCccH
Confidence 469999999864321 14455555555444 3355 567775 543321111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+............ ... ...........+++++|++++++.+
T Consensus 160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~a~~~~~l 233 (256)
T PRK06124 160 YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADP----AVG--PWLAQRTPLGRWGRPEEIAGAAVFL 233 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccCh----HHH--HHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55589887776553 4788999999988765432211100 000 0000001112478899999999999
Q ss_pred hcCCcc--CCceEEec
Q 021470 207 INDPRT--LNRTMYLR 220 (312)
Q Consensus 207 l~~~~~--~~~~~~~~ 220 (312)
+.++.. .|+.+.+.
T Consensus 234 ~~~~~~~~~G~~i~~d 249 (256)
T PRK06124 234 ASPAASYVNGHVLAVD 249 (256)
T ss_pred cCcccCCcCCCEEEEC
Confidence 987632 25555554
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-14 Score=118.45 Aligned_cols=205 Identities=13% Similarity=0.047 Sum_probs=128.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|++.|++|++..|+.... +.+.+ +.+. ...+.++.+|++|++++.++++
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEE---DAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchh---hHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999887653321 11111 1121 2357789999999988877654
Q ss_pred --cCCEEEEcCCCCcc---------------ccchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHI---------------RSHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~---------------~~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|+++|+++.... ...|+.++..+++++...- .-.++|+ |+....... .....|.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----~~~~~Y~ 200 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----PHLLDYA 200 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----CCcchhH
Confidence 57999999985321 0267777888888876531 0135665 543322111 1123566
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..++||.+...+....... ......+........+...+|+|+++..++.
T Consensus 201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~r~~~pedva~~~~fL~s 274 (294)
T PRK07985 201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT------QDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274 (294)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCC------HHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Confidence 699988776653 489999999999876643211000 0000001111111235679999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
.+. ..|..+.+.|
T Consensus 275 ~~~~~itG~~i~vdg 289 (294)
T PRK07985 275 QESSYVTAEVHGVCG 289 (294)
T ss_pred hhcCCccccEEeeCC
Confidence 643 2355566643
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.7e-14 Score=116.91 Aligned_cols=198 Identities=14% Similarity=0.101 Sum_probs=126.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|++.|++|++++|+. ++. ....++.++++|+.|++++.++++ +
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~-----~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRA-----PET-----VDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCh-----hhh-----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999973 221 124568899999999998888775 4
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|+|||+++..... ..|+.....+++++... +...++|+ |+...... ......|..
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~Y~~ 150 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-----SPGTAAYGA 150 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-----CCCCchhHH
Confidence 69999999864311 15666777777776541 11345665 54432211 112245555
Q ss_pred hHHHHHHHHHHh------CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 137 DKMVVRKAIEDA------GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 137 ~K~~~e~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
+|..++.+.+.. .+.+..++||.+........... ...............+...+|+|++++.++..+
T Consensus 151 sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 151 AKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD------AEGIAAVAATVPLGRLATPADIAWACLFLASDL 224 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC------HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999988887641 25566778887765432211000 000000000011123567899999999998764
Q ss_pred c--cCCceEEecC
Q 021470 211 R--TLNRTMYLRP 221 (312)
Q Consensus 211 ~--~~~~~~~~~~ 221 (312)
. ..|..+.+.|
T Consensus 225 ~~~i~G~~i~vdg 237 (252)
T PRK07856 225 ASYVSGANLEVHG 237 (252)
T ss_pred cCCccCCEEEECC
Confidence 2 2356666754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.2e-14 Score=115.33 Aligned_cols=203 Identities=15% Similarity=0.134 Sum_probs=125.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|+.++++||||+|+||++++++|++.|++|++..+... .......+.+.. ..+..+.+|+.|.+++.++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS---PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh---HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 66788999999999999999999999999988654322 222222233322 345677899999988887764
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+... +.++.++.+.+ ..++|+ |+...... .....
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~ 151 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKG-----QFGQT 151 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCC-----CCCCh
Confidence 589999999875321 1444443 34555555555 667775 44322111 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .+++++.++||.+.......... ..............+...+|++.++..
T Consensus 152 ~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (246)
T PRK12938 152 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP--------DVLEKIVATIPVRRLGSPDEIGSIVAW 223 (246)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh--------HHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence 455599877665543 47889999999887654332110 000000011122345678999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.++. ..+..+.+.
T Consensus 224 l~~~~~~~~~g~~~~~~ 240 (246)
T PRK12938 224 LASEESGFSTGADFSLN 240 (246)
T ss_pred HcCcccCCccCcEEEEC
Confidence 887642 245556664
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.6e-14 Score=116.98 Aligned_cols=205 Identities=10% Similarity=0.008 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ +++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLD-----AALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 33332 122232 3457789999999988888775
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+.....+++++. +.+ ..++|+ |+...... ....
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~ 155 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKI-----IPGC 155 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccC-----CCCc
Confidence 589999999864321 145666656666554 334 456665 54322111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .|+++..++||.+-........... .... ..............+...+|+|.+++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~r~~~~~~va~~~~ 233 (260)
T PRK07063 156 FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-PDPA-AARAETLALQPMKRIGRPEEVAMTAV 233 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-CChH-HHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3455599998877764 3688888999987654322111000 0000 00000000001123567899999999
Q ss_pred HHhcCCc--cCCceEEec
Q 021470 205 KAINDPR--TLNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~ 220 (312)
.++.++. ..|..+.+.
T Consensus 234 fl~s~~~~~itG~~i~vd 251 (260)
T PRK07063 234 FLASDEAPFINATCITID 251 (260)
T ss_pred HHcCccccccCCcEEEEC
Confidence 9987643 235555554
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.8e-14 Score=115.65 Aligned_cols=179 Identities=17% Similarity=0.153 Sum_probs=120.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh----ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF----KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l----~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
+++++||||+|+||++++++|+++|++|++++|+ +++.+.. ..+ ....++++++|++|++++.++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 76 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR-----TDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFR 76 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 4333221 111 13467889999999988877654
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+....++++++. +.+ ..++|+ |+.+..... + .+.
T Consensus 77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---~-~~~ 151 (248)
T PRK08251 77 DELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGL---P-GVK 151 (248)
T ss_pred HHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCC---C-CCc
Confidence 689999999864321 145566666666553 445 567765 543322111 0 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .+++++.++||++....... .+. ....++.+|.+++++
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---------~~~----------~~~~~~~~~~a~~i~ 212 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK---------AKS----------TPFMVDTETGVKALV 212 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc---------ccc----------CCccCCHHHHHHHHH
Confidence 4566699988766643 36788889999875442211 000 113567899999999
Q ss_pred HHhcCC
Q 021470 205 KAINDP 210 (312)
Q Consensus 205 ~~l~~~ 210 (312)
.+++.+
T Consensus 213 ~~~~~~ 218 (248)
T PRK08251 213 KAIEKE 218 (248)
T ss_pred HHHhcC
Confidence 999765
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.6e-14 Score=115.36 Aligned_cols=203 Identities=13% Similarity=0.102 Sum_probs=121.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
||++|+||||+|+||+.+++.|+++|++|.++.++. +++.+. ...+. ..++.++++|+.|++++.++++
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARD----AAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQS 76 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHH
Confidence 257999999999999999999999999998775442 222221 12222 3468899999999988877654
Q ss_pred ---cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh-CCC------ceeec-CCCCCCcccccccC
Q 021470 75 ---LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA-GNV------KRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~-~~v------~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|++||+++..... ..|+.....+++++... . . .++|+ |+.+..... +
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~~~ii~~sS~~~~~~~---~- 151 (248)
T PRK06947 77 AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLS-TDRGGRGGAIVNVSSIASRLGS---P- 151 (248)
T ss_pred hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCCCCcEEEEECchhhcCCC---C-
Confidence 589999999864311 14555555665443322 1 1 23554 443221111 0
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.....|..+|..++.+.+. .++++++++||.+............ ... .............++|+++
T Consensus 152 ~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~---~~~----~~~~~~~~~~~~~~e~va~ 224 (248)
T PRK06947 152 NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPG---RAA----RLGAQTPLGRAGEADEVAE 224 (248)
T ss_pred CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHH---HHH----HHhhcCCCCCCcCHHHHHH
Confidence 0113566699998766542 4789999999988665332100000 000 0000000112457899999
Q ss_pred HHHHHhcCCc--cCCceEEec
Q 021470 202 YTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~ 220 (312)
.++.++.++. ..|..+.+.
T Consensus 225 ~~~~l~~~~~~~~~G~~~~~~ 245 (248)
T PRK06947 225 TIVWLLSDAASYVTGALLDVG 245 (248)
T ss_pred HHHHHcCccccCcCCceEeeC
Confidence 9999988763 234555553
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.6e-14 Score=116.91 Aligned_cols=205 Identities=14% Similarity=0.056 Sum_probs=123.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .. .....+.+. ..++.++++|++|++++.++++
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA----VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999997 21 111222332 2357899999999988877665
Q ss_pred -cCCEEEEcCCCCccc----c-----------chhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR----S-----------HQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~----~-----------~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... + .|+.+... ++...++.+ .++|+ |+...... ......
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~ 153 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAA-----DLYRSG 153 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCC-----CCCCch
Confidence 479999999864311 0 34444333 344444433 45664 54332211 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeE-EeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV-LLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..++.+.+. .|+++..+.||.+............. ......+. ..........+...+|+|+++..
T Consensus 154 Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 232 (272)
T PRK08589 154 YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE-DEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF 232 (272)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch-hhHHHHHhhhhhccCCCCCCcCHHHHHHHHHH
Confidence 55599998877764 46888899999886554322111000 00000000 00000011135689999999999
Q ss_pred HhcCCc-c-CCceEEec
Q 021470 206 AINDPR-T-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~ 220 (312)
++.++. . .|..+.+.
T Consensus 233 l~s~~~~~~~G~~i~vd 249 (272)
T PRK08589 233 LASDDSSFITGETIRID 249 (272)
T ss_pred HcCchhcCcCCCEEEEC
Confidence 987542 2 35555664
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-13 Score=115.09 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=122.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|..++|+||||+|+||.++++.|+++|++|++++|+ +.+.+.... ..+..++++|++|++++.++++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDID-----PEAGKAAAD--EVGGLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HcCCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999999999999997 333321111 1233688999999998888776
Q ss_pred -cCCEEEEcCCCCccc-----c-----------chhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHIR-----S-----------HQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~-----~-----------~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... + .|+.+...++++ .++.+ ..++|+ |+....... ..+..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~----~~~~~ 152 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGS----ATSQI 152 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCC----CCCCc
Confidence 579999999864311 0 344444444443 34444 345554 442211111 01123
Q ss_pred chhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+ ..+++++.++||.+.............. ...+.....+ ...+..++|+++++..
T Consensus 153 ~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~a~~~~~ 227 (255)
T PRK06057 153 SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPE-RAARRLVHVP----MGRFAEPEEIAAAVAF 227 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHH-HHHHHHhcCC----CCCCcCHHHHHHHHHH
Confidence 46669976655543 2478999999999876644322110000 0000000011 1246789999999988
Q ss_pred HhcCCc-c-CCceEEec
Q 021470 206 AINDPR-T-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~ 220 (312)
++.... . .+..+.+.
T Consensus 228 l~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 228 LASDDASFITASTFLVD 244 (255)
T ss_pred HhCccccCccCcEEEEC
Confidence 886542 2 24555553
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.5e-14 Score=116.59 Aligned_cols=202 Identities=11% Similarity=0.067 Sum_probs=120.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|++++||||+|+||++++++|++.|++|+++ .|+ +++.. ....+. ..++..+++|+.|++++.++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 75 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQN-----LHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ 75 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999875 454 32221 112222 2357889999999998888776
Q ss_pred ---cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC------CCceeec-CCCCCCcccccccCC
Q 021470 75 ---LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG------NVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~------~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|+|||+++..... ..|+.....+++++...- .-.+||+ |+.+..... + .
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~---~-~ 151 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA---P-G 151 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC---C-C
Confidence 468999999864211 144555555555444321 0134664 554322211 1 0
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
....|..+|..++.+++. .+++++++||+.++++.................. ......+.+|+|++
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~ 224 (247)
T PRK09730 152 EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNI-------PMQRGGQPEEVAQA 224 (247)
T ss_pred cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcC-------CCCCCcCHHHHHHH
Confidence 012466699888776542 4789999999999876432111100000000000 00112378999999
Q ss_pred HHHHhcCCc--cCCceEEec
Q 021470 203 TMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~ 220 (312)
+..++..+. ..+..+.+.
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK09730 225 IVWLLSDKASYVTGSFIDLA 244 (247)
T ss_pred HHhhcChhhcCccCcEEecC
Confidence 999887642 234455553
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=114.19 Aligned_cols=206 Identities=13% Similarity=0.075 Sum_probs=124.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. ...+. ..++.++++|++|++++.++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN-----EETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 333221 12222 2467789999999998887765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.....+++++.. .+.-.++|+ |+....... .....
T Consensus 77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~ 151 (256)
T PRK08643 77 FGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----PELAV 151 (256)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----CCCch
Confidence 589999999864321 1455555555555443 221234554 554322211 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCee-----EEeCCCCcceeeeeHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV-----VLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~D~a~ 201 (312)
|..+|..++.+.+. .|+.++.++||.+............ ....+... .+... .....+...+|+|+
T Consensus 152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~ 229 (256)
T PRK08643 152 YSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQV-GENAGKPDEWGMEQFAKD-ITLGRLSEPEDVAN 229 (256)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhh-ccccCCCchHHHHHHhcc-CCCCCCcCHHHHHH
Confidence 66699988766653 4788999999988765432211100 00000000 00000 01123567899999
Q ss_pred HHHHHhcCCc--cCCceEEec
Q 021470 202 YTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~ 220 (312)
++..++.... ..|..+.+.
T Consensus 230 ~~~~L~~~~~~~~~G~~i~vd 250 (256)
T PRK08643 230 CVSFLAGPDSDYITGQTIIVD 250 (256)
T ss_pred HHHHHhCccccCccCcEEEeC
Confidence 9999987542 235555554
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.7e-14 Score=115.70 Aligned_cols=201 Identities=10% Similarity=0.087 Sum_probs=125.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||+.++++|++.|++|+++.|+ .. .++.. +.+. ..++.++++|+.|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~--~~~~~--~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TN--WDETR--RLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cH--HHHHH--HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999987 21 12221 1121 3468899999999998888776
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHH----HHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLV----DAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~----~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+.....+. ..+++.+ ..++|+ |+....... .....|
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y 163 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGG-----KFVPAY 163 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCC-----CCchhh
Confidence 579999999864311 13455544444 4444444 456665 443221111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++..++||.+........... ......... ......+...+|++..+..++
T Consensus 164 ~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~ 237 (258)
T PRK06935 164 TASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----KNRNDEILK-RIPAGRWGEPDDLMGAAVFLA 237 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----hHHHHHHHh-cCCCCCCCCHHHHHHHHHHHc
Confidence 5599998877653 478889999998765532211100 000000000 011124678899999999988
Q ss_pred cCCc--cCCceEEec
Q 021470 208 NDPR--TLNRTMYLR 220 (312)
Q Consensus 208 ~~~~--~~~~~~~~~ 220 (312)
.+.. ..|.++.+.
T Consensus 238 s~~~~~~~G~~i~~d 252 (258)
T PRK06935 238 SRASDYVNGHILAVD 252 (258)
T ss_pred ChhhcCCCCCEEEEC
Confidence 7543 235566664
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-13 Score=114.86 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=127.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||.+++++|+++|++|+++.|+ +++.+ ....+. ..++.++++|++|++++.++++
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDIN-----QELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999887 33332 112232 2357889999999999888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+...+.++ +++.+ ..++|+ |+....... .+...
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~ 158 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGR-----ETVSA 158 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCC-----CCCcc
Confidence 479999999975421 1445554444444 44444 456665 443221111 12345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEE---eCCCCcceeeeeHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL---LGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~D~a~~~ 203 (312)
|..+|..++.+.+. .++.+..++||.+............ ..+..... .........+...+|+|+.+
T Consensus 159 Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 235 (265)
T PRK07097 159 YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQ---ADGSRHPFDQFIIAKTPAARWGDPEDLAGPA 235 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcc---ccccchhHHHHHHhcCCccCCcCHHHHHHHH
Confidence 66699998877664 4788999999998765433211100 00000000 00000112366789999999
Q ss_pred HHHhcCCc--cCCceEEec
Q 021470 204 MKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~ 220 (312)
..++..+. ..+..+.+.
T Consensus 236 ~~l~~~~~~~~~g~~~~~~ 254 (265)
T PRK07097 236 VFLASDASNFVNGHILYVD 254 (265)
T ss_pred HHHhCcccCCCCCCEEEEC
Confidence 99998642 235555554
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.7e-14 Score=116.46 Aligned_cols=201 Identities=11% Similarity=0.061 Sum_probs=123.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|+||+++++.|+++|++|+++.|+. ++.+. .+.+. ..++..+.+|++|.+++.++++
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDA-----AGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 7999999999999999999999999999999983 33221 12222 3457889999999988888765
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.....+++ ...+.+ ..++++ |+.+.... ......
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~-----~~~~~~ 156 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGA-----APKMSI 156 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccC-----CCCCch
Confidence 469999999864211 144444444443 333444 456665 44332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..+.||.+-.......... ....... +........+...+|+++.+.++
T Consensus 157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~p~~ia~~~~~l 231 (253)
T PRK06172 157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA----DPRKAEF-AAAMHPVGRIGKVEEVASAVLYL 231 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc----ChHHHHH-HhccCCCCCccCHHHHHHHHHHH
Confidence 55599988877653 367788889998765543321110 0000000 00001112356899999999999
Q ss_pred hcCC-c-cCCceEEec
Q 021470 207 INDP-R-TLNRTMYLR 220 (312)
Q Consensus 207 l~~~-~-~~~~~~~~~ 220 (312)
+.+. . ..|+.+.+.
T Consensus 232 ~~~~~~~~~G~~i~~d 247 (253)
T PRK06172 232 CSDGASFTTGHALMVD 247 (253)
T ss_pred hCccccCcCCcEEEEC
Confidence 9764 2 245566664
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=114.85 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=125.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||.++++.|++.|++|++++|+ +++.+.+ +.+. ..++.++.+|+.|++++.++++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARR-----QAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999998 3333221 2222 2357889999999988888765
Q ss_pred --cCCEEEEcCCCCccc---------------cchhHhHH----HHHHHHHHhCCCceeec-CCC-CCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIR---------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEF-GTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~---------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~-g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+.... .++..+++.+ ..++|+ |+. +.... ..+.
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~-----~~~~ 154 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG-----FPGM 154 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC-----CCCc
Confidence 689999999864210 14444333 3455555555 456665 442 32111 1122
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++.+..++||.+........... .... ...........+...+|+|+.++
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~va~~~~ 228 (254)
T PRK07478 155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT----PEAL--AFVAGLHALKRMAQPEEIAQAAL 228 (254)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC----HHHH--HHHHhcCCCCCCcCHHHHHHHHH
Confidence 4455599998777653 368888899998765432211100 0000 00000011123568999999999
Q ss_pred HHhcCCc-c-CCceEEec
Q 021470 205 KAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~-~-~~~~~~~~ 220 (312)
.++.++. . .|..+.+.
T Consensus 229 ~l~s~~~~~~~G~~~~~d 246 (254)
T PRK07478 229 FLASDAASFVTGTALLVD 246 (254)
T ss_pred HHcCchhcCCCCCeEEeC
Confidence 9987643 2 35555664
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.8e-14 Score=116.72 Aligned_cols=204 Identities=10% Similarity=0.092 Sum_probs=124.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc----CCCeEEEccCCCHHHHHHHhc------
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE----QGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
+++||||+|+||+++++.|+++|++|++++|+.... .+ +..+.+.. ..+..+++|+.|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~-~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAG-LD--AFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchH-HH--HHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 489999999999999999999999999999873211 11 11122211 123467899999998877664
Q ss_pred -cCCEEEEcCCCCcccc--------------chhH----hHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIRS--------------HQIL----LQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~~--------------~~~~----~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++...... .|+. .+++++.++++.+ .+++|+ |+....... .....|
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-----~~~~~Y 151 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAE-----PDYTAY 151 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCC-----CCCchh
Confidence 5799999998654211 3444 5677888887776 677776 443322111 112345
Q ss_pred hhhHHHHHHHHHH-------h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
..+|..++.+.+. . +++++.++||.+..+......... ...........+.....+.+++|++++++.
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 228 (251)
T PRK07069 152 NASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL---GEEEATRKLARGVPLGRLGEPDDVAHAVLY 228 (251)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc---cchhHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 5599888777653 2 366788899988766543221100 000000001111111245679999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++..+. ..|..+.+.
T Consensus 229 l~~~~~~~~~g~~i~~~ 245 (251)
T PRK07069 229 LASDESRFVTGAELVID 245 (251)
T ss_pred HcCccccCccCCEEEEC
Confidence 876542 124444443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=114.74 Aligned_cols=204 Identities=11% Similarity=0.047 Sum_probs=124.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||+++++.|++.|++|++++|+.... .....+.+. ..++..+++|+.|++++.++++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG---LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL 84 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999874321 011122232 2357789999999988887765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+.....++++ +.+.+ ..++|+ |+....... +..+...|
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y 160 (254)
T PRK06114 85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVN---RGLLQAHY 160 (254)
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC---CCCCcchH
Confidence 469999999975321 1455555454444 44444 456664 442221111 11112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++.+++||.+........ .. ... ............+..++|++.+++.++
T Consensus 161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~-----~~~-~~~~~~~~p~~r~~~~~dva~~~~~l~ 233 (254)
T PRK06114 161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EM-----VHQ-TKLFEEQTPMQRMAKVDEMVGPAVFLL 233 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cc-----hHH-HHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 5599987766553 478899999998765433210 00 000 000000011123567899999999998
Q ss_pred cCCc-c-CCceEEec
Q 021470 208 NDPR-T-LNRTMYLR 220 (312)
Q Consensus 208 ~~~~-~-~~~~~~~~ 220 (312)
.+.. + .|.++.+.
T Consensus 234 s~~~~~~tG~~i~~d 248 (254)
T PRK06114 234 SDAASFCTGVDLLVD 248 (254)
T ss_pred CccccCcCCceEEEC
Confidence 7642 2 35555654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.7e-14 Score=115.68 Aligned_cols=200 Identities=12% Similarity=0.127 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|+++|++|+++.|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARH-----LDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE 83 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 3333221 2222 2457788999999988887764
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCC-CCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEF-GTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~-g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... ..|+.....+++++.. .+.-.++++ |+. +..... + ....
T Consensus 84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---~-~~~~ 159 (253)
T PRK05867 84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV---P-QQVS 159 (253)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC---C-CCcc
Confidence 689999999864321 1556666666666543 220124554 432 321110 0 0123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .|+++..+.||.+..++....... .. . +........+...+|+|+++..
T Consensus 160 ~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~----~~--~---~~~~~~~~r~~~p~~va~~~~~ 230 (253)
T PRK05867 160 HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY----QP--L---WEPKIPLGRLGRPEELAGLYLY 230 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH----HH--H---HHhcCCCCCCcCHHHHHHHHHH
Confidence 566699998877764 478889999999865543221110 00 0 0000111235789999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.... ..|+.+.+.
T Consensus 231 L~s~~~~~~tG~~i~vd 247 (253)
T PRK05867 231 LASEASSYMTGSDIVID 247 (253)
T ss_pred HcCcccCCcCCCeEEEC
Confidence 987642 235556664
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=114.66 Aligned_cols=203 Identities=10% Similarity=0.018 Sum_probs=124.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|++.|++|.+..++. .++.. ....+. ...+..+++|+.+.+++..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNR----KEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCC----HHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 58999999999999999999999999998875432 22221 112222 2346778899999876654332
Q ss_pred --------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCC
Q 021470 75 --------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 --------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.....+++++...- ...++|+ |+...... ...
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~ 154 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----LPD 154 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----CCC
Confidence 589999999864311 156777777777766532 0236665 44332111 112
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..+.||.+........... ...... .........+.+++|+|+++
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~dva~~~ 228 (252)
T PRK12747 155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD----PMMKQY--ATTISAFNRLGEVEDIADTA 228 (252)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC----HHHHHH--HHhcCcccCCCCHHHHHHHH
Confidence 23566699998877653 478899999998876543221110 000000 00001112467899999999
Q ss_pred HHHhcCCc--cCCceEEec
Q 021470 204 MKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~ 220 (312)
..++.... ..|..+.+.
T Consensus 229 ~~l~s~~~~~~~G~~i~vd 247 (252)
T PRK12747 229 AFLASPDSRWVTGQLIDVS 247 (252)
T ss_pred HHHcCccccCcCCcEEEec
Confidence 99886532 234555554
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-13 Score=113.78 Aligned_cols=184 Identities=18% Similarity=0.218 Sum_probs=120.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh-ccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF-KEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l-~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|++|.++++.|+++|++|++++|+ +++...+ ..+ ...++.++.+|+.|++++.++++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRN-----AEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999998 4443222 111 13468899999999988877654
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCCCCCch
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+.++.++++++.. .+ ..+++. |+ .+.... .....|
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------~~~~~Y 152 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGY------PGYASY 152 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCC------CCccHH
Confidence 579999999864321 1566677777777654 33 345554 33 332111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++. .++.++.+.||.+........... ... .......+++|+|++++.++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----~~~--------~~~~~~~~~~~va~~i~~~~ 219 (263)
T PRK09072 153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA-----LNR--------ALGNAMDDPEDVAAAVLQAI 219 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc-----ccc--------cccCCCCCHHHHHHHHHHHH
Confidence 5599887666543 467788888987654322111000 000 00113568899999999999
Q ss_pred cCCc
Q 021470 208 NDPR 211 (312)
Q Consensus 208 ~~~~ 211 (312)
++..
T Consensus 220 ~~~~ 223 (263)
T PRK09072 220 EKER 223 (263)
T ss_pred hCCC
Confidence 8763
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=113.65 Aligned_cols=201 Identities=11% Similarity=0.065 Sum_probs=125.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||.++++.|++.|++|++++|+ +++.+ ..+.+. ...+..+++|+.|.+++.++++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK-----LDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 33332 222222 2346788999999988877664
Q ss_pred --cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI----R-----------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+++|+++.... . ..|+.....+++++ ++.+ ..++++ |+..... +..+..
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~ 156 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVS-----PGDFQG 156 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcC-----CCCCCc
Confidence 48999999985321 0 14555555555554 4444 456664 4422211 112233
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+++. .|+++..+.||.+...+........ ..............+...+|+|+++..
T Consensus 157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~va~~~~~ 230 (252)
T PRK07035 157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND------AILKQALAHIPLRRHAEPSEMAGAVLY 230 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH------HHHHHHHccCCCCCcCCHHHHHHHHHH
Confidence 455599999887764 3788889999987655433221100 000000000011235678999999999
Q ss_pred HhcCCc-c-CCceEEec
Q 021470 206 AINDPR-T-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~ 220 (312)
++.+.. . .|..+.+.
T Consensus 231 l~~~~~~~~~g~~~~~d 247 (252)
T PRK07035 231 LASDASSYTTGECLNVD 247 (252)
T ss_pred HhCccccCccCCEEEeC
Confidence 987653 2 34555554
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8.5e-14 Score=114.35 Aligned_cols=198 Identities=12% Similarity=0.088 Sum_probs=123.9
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
|+|||++|+||+++++.|+++|++|++++|+.... .......+.. ..+.++.+|++|++++.++++ ++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG---AEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhH---HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999874211 1111122222 247789999999998888775 46
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
|+|||+++..... ..|+....++++++.. .+ .+++++ |+.+..... .+...|..+
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~-----~~~~~y~~~ 151 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGN-----AGQANYAAS 151 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCC-----CCCchhHHH
Confidence 9999999975321 1456667777777765 34 457775 543322211 112345558
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|...+.+.+. .++.+++++|+.+..+........ . . ... .. ......+.+.+|+++++..++..+
T Consensus 152 k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~-~---~-~~~--~~-~~~~~~~~~~~~~a~~~~~~~~~~ 223 (239)
T TIGR01830 152 KAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEK-V---K-KKI--LS-QIPLGRFGTPEEVANAVAFLASDE 223 (239)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChH-H---H-HHH--Hh-cCCcCCCcCHHHHHHHHHHHhCcc
Confidence 8876665442 478899999987754432211100 0 0 000 00 001123568999999999888554
Q ss_pred c--cCCceEEec
Q 021470 211 R--TLNRTMYLR 220 (312)
Q Consensus 211 ~--~~~~~~~~~ 220 (312)
. ..++.|++.
T Consensus 224 ~~~~~g~~~~~~ 235 (239)
T TIGR01830 224 ASYITGQVIHVD 235 (239)
T ss_pred cCCcCCCEEEeC
Confidence 2 345677764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=113.86 Aligned_cols=201 Identities=11% Similarity=0.095 Sum_probs=128.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ .++.+. ...+. ..++.++.+|++|.+++.++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999887 333321 12222 2357788999999998877654
Q ss_pred --cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR-------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+....++++++.. .+ ..++|+ |+..... +..+...|
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~~~~~~~Y 159 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN-----KNINMTSY 159 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccC-----CCCCcchh
Confidence 579999999864321 1566777778887753 33 346664 5433211 11222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++. .++.+.++.||.+............. ... .........+...+|+++++..++
T Consensus 160 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~d~a~~~~~l~ 232 (255)
T PRK06113 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---EQK----MLQHTPIRRLGQPQDIANAALFLC 232 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHH---HHH----HHhcCCCCCCcCHHHHHHHHHHHc
Confidence 5599998887764 46778888999876543221110000 000 000011123568899999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|..+.+.|
T Consensus 233 ~~~~~~~~G~~i~~~g 248 (255)
T PRK06113 233 SPAASWVSGQILTVSG 248 (255)
T ss_pred CccccCccCCEEEECC
Confidence 7542 2356667754
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=114.34 Aligned_cols=201 Identities=10% Similarity=0.113 Sum_probs=127.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|+.+++++.++++
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARD-----ADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 3333211 2221 3467889999999988766654
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+.....+++++. +.+ ..++|+ |+...... ..+.
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~-----~~~~ 157 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTH-----VRSG 157 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCC-----CCCC
Confidence 579999999863211 156666677777664 344 466765 44332211 1223
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .+++++.++||.+........... ..............-+...+|++.++.
T Consensus 158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~ 231 (257)
T PRK09242 158 APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD------PDYYEQVIERTPMRRVGEPEEVAAAVA 231 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC------hHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 4566699888877653 478899999998865543221110 000000000011123457899999999
Q ss_pred HHhcCCc--cCCceEEec
Q 021470 205 KAINDPR--TLNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~ 220 (312)
.++.... ..|+.+.+.
T Consensus 232 ~l~~~~~~~~~g~~i~~~ 249 (257)
T PRK09242 232 FLCMPAASYITGQCIAVD 249 (257)
T ss_pred HHhCcccccccCCEEEEC
Confidence 9986532 235666664
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-13 Score=111.42 Aligned_cols=199 Identities=12% Similarity=0.071 Sum_probs=123.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++|+||||+|.||+++++.|+++|++|+++.|+. +++.+.+ ....+++++.+|++|.+.+.++++ ++|++
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~l--~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS----KDAAERL--AQETGATAVQTDSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC----HHHHHHH--HHHhCCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence 57899999999999999999999999998876642 2232211 112357888999999988887765 48999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHh-CCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEA-GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~-~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~ 143 (312)
||+++..... ..|+.....++.++... ....++|+ |+..... .+..+...|..+|..++.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~~Y~~sKaa~~~ 155 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----MPVAGMAAYAASKSALQG 155 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----CCCCCCcchHHhHHHHHH
Confidence 9999864321 14556666665555543 11245554 4432211 122233456669999887
Q ss_pred HHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cCC
Q 021470 144 AIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TLN 214 (312)
Q Consensus 144 ~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~ 214 (312)
+.+. .++.++.++||.+........... .. . .........+...+|+++++..++.+.. ..|
T Consensus 156 ~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~----~~--~---~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G 226 (237)
T PRK12742 156 MARGLARDFGPRGITINVVQPGPIDTDANPANGPM----KD--M---MHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTG 226 (237)
T ss_pred HHHHHHHHHhhhCeEEEEEecCcccCCccccccHH----HH--H---HHhcCCCCCCCCHHHHHHHHHHHcCcccCcccC
Confidence 7753 468899999998765432211000 00 0 0000011235688999999999887643 234
Q ss_pred ceEEec
Q 021470 215 RTMYLR 220 (312)
Q Consensus 215 ~~~~~~ 220 (312)
..+.+.
T Consensus 227 ~~~~~d 232 (237)
T PRK12742 227 AMHTID 232 (237)
T ss_pred CEEEeC
Confidence 455553
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=106.93 Aligned_cols=237 Identities=18% Similarity=0.163 Sum_probs=156.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh----hccCCCeEEEccCCCHHHHHHHhc--cCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS----FKEQGAKLVSGSFNDYQSLVNAVK--LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~v~~D~~d~~~l~~~~~--~~d 77 (312)
+..||||-||+=|+.|++.|+.+|++|.++.|++++-+-.+.+.+-. ..........+|++|...+.+++. ..+
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 35789999999999999999999999999999887765444432211 112346788999999999999887 678
Q ss_pred EEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCc---eee-cC---CCCCCcccc---cccCCCCCchhhh
Q 021470 78 VVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVK---RFL-PS---EFGTDPAKM---ANAMEPGRVTFDD 137 (312)
Q Consensus 78 ~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~---~~v-~S---~~g~~~~~~---~~~~~p~~~~~~~ 137 (312)
-|+|+++..... ++...++..|++|.+.++ +. +|. .| -||.....+ .+|..|.+||..+
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~-l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~a 187 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR-LTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAA 187 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC-cccceeEEecccHhhcccccCCCcccCCCCCCCChhHHh
Confidence 899999876521 245567899999999876 32 233 23 266433222 6777887777778
Q ss_pred HHHHHHHH----HHhCCCeEEEeccccc--------ccccccCCCCCcc--CCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 138 KMVVRKAI----EDAGIPFTYVSANCFA--------GYFLGGLCQPGSI--LPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 138 K~~~e~~~----~~~~~~~~i~r~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
|...--++ +.+++- -..|..+ ++|....+..... ......-...|+-+..++|-|..|-++++
T Consensus 188 Kmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAM 264 (376)
T KOG1372|consen 188 KMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAM 264 (376)
T ss_pred hhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHH
Confidence 76543221 112211 0111111 2222221111000 01122333467778899999999999999
Q ss_pred HHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeec
Q 021470 204 MKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 204 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
...|.++... .|.+ ..++..|.+|+++.-....|+.+.++.
T Consensus 265 W~mLQ~d~Pd--DfVi-ATge~hsVrEF~~~aF~~ig~~l~Weg 305 (376)
T KOG1372|consen 265 WLMLQQDSPD--DFVI-ATGEQHSVREFCNLAFAEIGEVLNWEG 305 (376)
T ss_pred HHHHhcCCCC--ceEE-ecCCcccHHHHHHHHHHhhCcEEeecc
Confidence 9999876532 3344 357799999999999999998776653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.4e-13 Score=114.89 Aligned_cols=187 Identities=16% Similarity=0.124 Sum_probs=120.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .++.+.. +.+. ...+.++.+|++|++++.++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARD-----EEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999998 4444322 2232 2356788999999998888763
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..++.+++ ++.+ ..++|. |+.+..... +....
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~-----p~~~~ 155 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQ-----PYAAA 155 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCC-----CCchh
Confidence 589999999864321 14555555555554 3444 345654 443321111 11234
Q ss_pred hhhhHHHHHHHHHH--------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED--------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~~--------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..+..+.+. .++.++.+.||.+..++....... .... .....++.+.+|+|++++.
T Consensus 156 Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-----~~~~------~~~~~~~~~pe~vA~~il~ 224 (330)
T PRK06139 156 YSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-----TGRR------LTPPPPVYDPRRVAKAVVR 224 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-----cccc------ccCCCCCCCHHHHHHHHHH
Confidence 55599976555432 267788889998866543221110 0000 0112246789999999999
Q ss_pred HhcCCc
Q 021470 206 AINDPR 211 (312)
Q Consensus 206 ~l~~~~ 211 (312)
++.+++
T Consensus 225 ~~~~~~ 230 (330)
T PRK06139 225 LADRPR 230 (330)
T ss_pred HHhCCC
Confidence 998774
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-13 Score=114.92 Aligned_cols=202 Identities=14% Similarity=0.078 Sum_probs=121.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc---cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK---EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|.||+++++.|++.|++|+++.|+. .++.+ ..+.+. ...+.++++|++|++++.++++
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSN----VEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999999998887643 22221 112221 3467899999999988887765
Q ss_pred ---cCCEEEEcCCCCc---------ccc-----------chhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccc
Q 021470 75 ---LVDVVICAISGVH---------IRS-----------HQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 75 ---~~d~v~~~~~~~~---------~~~-----------~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++|++||+++... ..+ .|+.. ++.++...++.+ -.++|+ |+.+....
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---- 158 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY---- 158 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC----
Confidence 4799999997431 001 22222 233344444434 356665 54332111
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
......|..+|..++.+.+. .|+++..+.||.+-......+... ...... .........+...+|+
T Consensus 159 -~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-----~~~~~~-~~~~~~~~r~~~p~~v 231 (260)
T PRK08416 159 -IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-----EEVKAK-TEELSPLNRMGQPEDL 231 (260)
T ss_pred -CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-----HHHHHH-HHhcCCCCCCCCHHHH
Confidence 11123455599998877653 478888999998755432221110 000000 0000011235689999
Q ss_pred HHHHHHHhcCCc-c-CCceEEec
Q 021470 200 AMYTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 200 a~~~~~~l~~~~-~-~~~~~~~~ 220 (312)
|.+++.++..+. . .|..+.+.
T Consensus 232 a~~~~~l~~~~~~~~~G~~i~vd 254 (260)
T PRK08416 232 AGACLFLCSEKASWLTGQTIVVD 254 (260)
T ss_pred HHHHHHHcChhhhcccCcEEEEc
Confidence 999999987542 2 34555554
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=112.47 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=124.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||++++++|+++|++|+++.|+.. +......+.. ..++.++++|++|++++.++++ +
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA---PETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH---HHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999888621 1111111222 3467889999999998888775 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.....+.+++.. .+.-.++|+ |+....... .....|..
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~~~~~Y~a 158 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-----IRVPSYTA 158 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-----CCCcchHH
Confidence 89999999864321 1566666666665543 221135554 432211111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+........... ..... .... .-....+...+|+|+++..++..
T Consensus 159 sK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~----~~~~~-~~~~-~~p~~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 159 SKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD----TARNE-AILE-RIPASRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC----hHHHH-HHHh-cCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877652 578899999998765432211100 00000 0000 00112357899999999999875
Q ss_pred Cc--cCCceEEec
Q 021470 210 PR--TLNRTMYLR 220 (312)
Q Consensus 210 ~~--~~~~~~~~~ 220 (312)
.. ..|..+.+.
T Consensus 233 ~~~~~~G~~i~vd 245 (251)
T PRK12481 233 ASDYVTGYTLAVD 245 (251)
T ss_pred cccCcCCceEEEC
Confidence 32 235555554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.4e-13 Score=113.18 Aligned_cols=202 Identities=13% Similarity=0.166 Sum_probs=124.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|.++|++|++++|+.. +. ...++.++++|+.|++++.++++ +
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~-----~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP-----DD------LPEGVEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh-----hh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999732 11 13467889999999988776543 5
Q ss_pred CCEEEEcCCCCcc-----c-----------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCC-CCCc
Q 021470 76 VDVVICAISGVHI-----R-----------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAME-PGRV 133 (312)
Q Consensus 76 ~d~v~~~~~~~~~-----~-----------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~-p~~~ 133 (312)
+|+|||+++.... . ..|+.+..++ +..+++.+ ..++|+ |+..... +.. +...
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~-----~~~~~~~~ 151 (260)
T PRK06523 78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRL-----PLPESTTA 151 (260)
T ss_pred CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccC-----CCCCCcch
Confidence 8999999985321 0 1455555444 44444444 456665 4433211 111 2345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCC-CC---ccCCCCCeeEEe--CCCCcceeeeeHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ-PG---SILPSKDSVVLL--GDGNPKAIYVDEDDIA 200 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~--~~~~~~~~~v~~~D~a 200 (312)
|..+|..++.+.+. .++.+.+++||.+..+....... .. ..........+. -.+-....+...+|+|
T Consensus 152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va 231 (260)
T PRK06523 152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVA 231 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHH
Confidence 65699998877653 47889999999987654321100 00 000000000000 0000112345789999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++..++.... ..|+.+.+.|
T Consensus 232 ~~~~~l~s~~~~~~~G~~~~vdg 254 (260)
T PRK06523 232 ELIAFLASDRAASITGTEYVIDG 254 (260)
T ss_pred HHHHHHhCcccccccCceEEecC
Confidence 99999997642 2356666654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.3e-13 Score=111.51 Aligned_cols=192 Identities=15% Similarity=0.170 Sum_probs=121.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..++|+||||+|+||+++++.|++.|++|+++.|+ +++.+.+ ..+. ..++.++.+|+.+++++.++++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR-----VERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999998 4444322 2221 3467899999999998888765
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCC-------Cceeec-CCCCCCccccc
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGN-------VKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~-------v~~~v~-S~~g~~~~~~~ 125 (312)
++|++||+++..... ..|+....++++++.. ... ..++|+ |+.+...
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---- 158 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR---- 158 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC----
Confidence 589999999864311 1455556666665542 210 135554 4322211
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
+..+..+|..+|...+.+.+. .++++++++||.+........... ..... .... -....+...+|
T Consensus 159 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~--~~~~-~~~~~~~~p~~ 230 (258)
T PRK06949 159 -VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET----EQGQK--LVSM-LPRKRVGKPED 230 (258)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh----HHHHH--HHhc-CCCCCCcCHHH
Confidence 111223455599887776653 478899999999876543211100 00000 0000 01124566899
Q ss_pred HHHHHHHHhcCC
Q 021470 199 IAMYTMKAINDP 210 (312)
Q Consensus 199 ~a~~~~~~l~~~ 210 (312)
+++++..++..+
T Consensus 231 ~~~~~~~l~~~~ 242 (258)
T PRK06949 231 LDGLLLLLAADE 242 (258)
T ss_pred HHHHHHHHhChh
Confidence 999999998754
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-13 Score=109.45 Aligned_cols=195 Identities=18% Similarity=0.135 Sum_probs=122.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++|+||||+|++|.++++.|++.|++|++++|+ +++.+.+ +.+. ..+++++++|+.+++++.++++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN-----ENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4699999999999999999999999999999998 4444332 2222 2367899999999988877654
Q ss_pred -cCCEEEEcCCCCccc------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 75 -LVDVVICAISGVHIR------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
++|.++|+++..... +.|+.....+++++... . -.++|. |+.+.... +..+...|..+|
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~----~~~~~~~Y~~sK 154 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-GSSIVLVSSMSGIYK----ASPDQLSYAVAK 154 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-CCEEEEEecchhccc----CCCCchHHHHHH
Confidence 469999999854321 13334444444444332 1 134543 54332111 112223466699
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
...+.+++. .+++++++||+++.+....... .. . .. .....+++.+|+++++..++..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~------~~--~---~~--~~~~~~~~~~~va~~~~~~~~~~~ 221 (238)
T PRK05786 155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN------WK--K---LR--KLGDDMAPPEDFAKVIIWLLTDEA 221 (238)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh------hh--h---hc--cccCCCCCHHHHHHHHHHHhcccc
Confidence 887655432 4899999999998865321100 00 0 00 001135788999999999997643
Q ss_pred --cCCceEEec
Q 021470 212 --TLNRTMYLR 220 (312)
Q Consensus 212 --~~~~~~~~~ 220 (312)
..|..+.+.
T Consensus 222 ~~~~g~~~~~~ 232 (238)
T PRK05786 222 DWVDGVVIPVD 232 (238)
T ss_pred cCccCCEEEEC
Confidence 235555554
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=114.09 Aligned_cols=206 Identities=12% Similarity=0.111 Sum_probs=125.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|.||+++++.|++.|++|++++|+ +++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~ 82 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRN-----EENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN 82 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999998 4333211 2221 3468899999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.. ++.++...++.+ ..++|+ |+...... .|...
T Consensus 83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~------~~~~~ 155 (263)
T PRK08339 83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEP------IPNIA 155 (263)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCC------CCcch
Confidence 489999999864321 033333 455566665555 456765 54332211 12233
Q ss_pred -hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCC-Cc-cCCC-CCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 134 -TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQP-GS-ILPS-KDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 -~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
|..+|..++.+.+. .|+++..+.||.+........... .. .... ...............+...+|+|++
T Consensus 156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 235 (263)
T PRK08339 156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYL 235 (263)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHH
Confidence 44489887776653 478888999998865433211000 00 0000 0000000000111235678999999
Q ss_pred HHHHhcCCc-c-CCceEEec
Q 021470 203 TMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~~-~-~~~~~~~~ 220 (312)
+..++..+. . .|..+.+.
T Consensus 236 v~fL~s~~~~~itG~~~~vd 255 (263)
T PRK08339 236 VAFLASDLGSYINGAMIPVD 255 (263)
T ss_pred HHHHhcchhcCccCceEEEC
Confidence 999987642 2 34555554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=111.64 Aligned_cols=200 Identities=15% Similarity=0.147 Sum_probs=123.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|++|+++++.|+++|++|+++.|+. +++.+ ....+. ..++.++.+|+.|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPN----EERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL 76 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999998842 22221 111221 3468899999999988877664
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+..... ++..+++.+ ..++++ |+....... .....|
T Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~-----~~~~~y 150 (242)
T TIGR01829 77 GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQ-----FGQTNY 150 (242)
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-----CCcchh
Confidence 489999999864311 134454434 455555556 667775 543222111 112344
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+++. .+++++.++||.+..+......... .. . +-.......+...+|+++++..++
T Consensus 151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~a~~~~~l~ 222 (242)
T TIGR01829 151 SAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDV---LN-S----IVAQIPVGRLGRPEEIAAAVAFLA 222 (242)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHH---HH-H----HHhcCCCCCCcCHHHHHHHHHHHc
Confidence 4588866655442 4788899999998765432211100 00 0 000001123456789999998887
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.++. ..|+.+.+.|
T Consensus 223 ~~~~~~~~G~~~~~~g 238 (242)
T TIGR01829 223 SEEAGYITGATLSING 238 (242)
T ss_pred CchhcCccCCEEEecC
Confidence 6642 3356666653
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=114.65 Aligned_cols=195 Identities=13% Similarity=0.110 Sum_probs=119.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc---cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK---EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
++++||||+|.||.++++.|+++|++|+++.|+ +++.+. .+.+. ...+.++++|+.|++++.++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRD-----ADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA 75 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999987 333221 12222 2234567899999988776654
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+...+++++.. .+...++|+ |+....... .....
T Consensus 76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----~~~~~ 150 (272)
T PRK07832 76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----PWHAA 150 (272)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----CCCcc
Confidence 479999999864311 1566667777777542 221246664 543321111 11234
Q ss_pred hhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+ ..++++++++||.+..+........... .......... .......++.+|+|++++.+
T Consensus 151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~vA~~~~~~ 228 (272)
T PRK07832 151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVD-REDPRVQKWV-DRFRGHAVTPEKAAEKILAG 228 (272)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccC-cchhhHHHHH-HhcccCCCCHHHHHHHHHHH
Confidence 5558887665543 3578999999999876654332110000 0000000000 00112457999999999999
Q ss_pred hcCC
Q 021470 207 INDP 210 (312)
Q Consensus 207 l~~~ 210 (312)
+..+
T Consensus 229 ~~~~ 232 (272)
T PRK07832 229 VEKN 232 (272)
T ss_pred HhcC
Confidence 9654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.1e-13 Score=110.07 Aligned_cols=202 Identities=10% Similarity=0.022 Sum_probs=125.8
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCC-------ChHHHHHhhhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGV-------DIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.++|+||||+| .||..+++.|+++|++|++++|+..+. ..+.......+. ..+++++++|+++.+++.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 57899999995 799999999999999999998872211 011111112221 2358899999999988777
Q ss_pred Hhc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC---CCceeec-CCCCCCcccccc
Q 021470 72 AVK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG---NVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~---~v~~~v~-S~~g~~~~~~~~ 126 (312)
+++ ++|+|||+++..... ..|+.....+++++.... ...++|+ |+.....
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----- 159 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG----- 159 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC-----
Confidence 664 479999999864311 156777888888876431 1346665 4432211
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
+......|..+|..++.+++. .+++++.++||.+...+...... ........ ...+...+|+
T Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~-------~~~~~~~~----~~~~~~~~~~ 228 (256)
T PRK12748 160 PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK-------HHLVPKFP----QGRVGEPVDA 228 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH-------HhhhccCC----CCCCcCHHHH
Confidence 111223455599999887653 47889999999776543221000 00000000 1124567999
Q ss_pred HHHHHHHhcCCc--cCCceEEec
Q 021470 200 AMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 200 a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
|+++..++.... ..+..+++.
T Consensus 229 a~~~~~l~~~~~~~~~g~~~~~d 251 (256)
T PRK12748 229 ARLIAFLVSEEAKWITGQVIHSE 251 (256)
T ss_pred HHHHHHHhCcccccccCCEEEec
Confidence 999998887642 235666664
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=116.32 Aligned_cols=156 Identities=15% Similarity=0.067 Sum_probs=103.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ .++... .+.+. ...+.++++|+.|.+++.++++
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN-----LDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 433321 12222 3467889999999998887764
Q ss_pred ----cCCEEEEcCCCCccc------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCc------ccc--c
Q 021470 75 ----LVDVVICAISGVHIR------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDP------AKM--A 125 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~------~~~--~ 125 (312)
++|++||+++..... ..|+.+ +..+++.+++.+ ..++|+ |+.+... ... +
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~ 169 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWE 169 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcc
Confidence 589999999864211 145555 666777777666 567775 5432110 000 1
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEE--ecccccccc
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYV--SANCFAGYF 164 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~--r~~~~~~~~ 164 (312)
.+..+...|..+|...+.+.+. .++++.++ .||.+..+.
T Consensus 170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 1222334455699888776653 34555443 688876543
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.2e-14 Score=109.53 Aligned_cols=231 Identities=14% Similarity=0.108 Sum_probs=152.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEE--CCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLH--RPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~--r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
.+|||||+-|.+|..+++.|..+ |.+-++++ ++++. .. -..=.++..|+.|...+++..- .+|.
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~----~V-------~~~GPyIy~DILD~K~L~eIVVn~RIdW 113 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA----NV-------TDVGPYIYLDILDQKSLEEIVVNKRIDW 113 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch----hh-------cccCCchhhhhhccccHHHhhcccccce
Confidence 68999999999999999988754 64444442 22111 10 1233467789999999998764 6899
Q ss_pred EEEcCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCC---------CCCchhhhHHH
Q 021470 79 VICAISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAME---------PGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~---------p~~~~~~~K~~ 140 (312)
+||..+..+. ..+|+.+..|+++.|++++ .+.||+|..|..... +|.+ |..-|+-+|.-
T Consensus 114 L~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L~iFVPSTIGAFGPt--SPRNPTPdltIQRPRTIYGVSKVH 190 (366)
T KOG2774|consen 114 LVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-LKVFVPSTIGAFGPT--SPRNPTPDLTIQRPRTIYGVSKVH 190 (366)
T ss_pred eeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-eeEeecccccccCCC--CCCCCCCCeeeecCceeechhHHH
Confidence 9998765331 2388999999999999999 999999876654321 1211 22334448876
Q ss_pred HHHHH----HHhCCCeEEEecccccccc------cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 141 VRKAI----EDAGIPFTYVSANCFAGYF------LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 141 ~e~~~----~~~~~~~~i~r~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
+|-+- .+.|+++-.+|...++.+. ..+..........+++..-+-.++.+.++.+..|+-++++.++..+
T Consensus 191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~ 270 (366)
T KOG2774|consen 191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAAD 270 (366)
T ss_pred HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCC
Confidence 65443 3467888888833333221 1111100001133444455556788999999999999999998765
Q ss_pred --ccCCceEEecCCCCcCCHHHHHHHHHHHh-CCcceeecCCH
Q 021470 211 --RTLNRTMYLRPPKNILSQREVVETWEKLI-GKTLQKSSISK 250 (312)
Q Consensus 211 --~~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~~~~~~~~ 250 (312)
....++||++ +-.+|..|+++.+.+.. |..+.+...+.
T Consensus 271 ~~~lkrr~ynvt--~~sftpee~~~~~~~~~p~~~i~y~~~sr 311 (366)
T KOG2774|consen 271 SQSLKRRTYNVT--GFSFTPEEIADAIRRVMPGFEIDYDICTR 311 (366)
T ss_pred HHHhhhheeeec--eeccCHHHHHHHHHhhCCCceeecccchh
Confidence 3346788987 45899999999999876 44555555544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=113.69 Aligned_cols=197 Identities=13% Similarity=0.075 Sum_probs=118.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV------ 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~------ 76 (312)
|++++||||+|+||+++++.|+++|++|++++|+.. ++...+......+++++++|++|++++.++++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN----KELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE 76 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch----HHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence 369999999999999999999999999999999742 1221111112356889999999999988877532
Q ss_pred ---C--EEEEcCCCCcc----c-----------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 77 ---D--VVICAISGVHI----R-----------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 77 ---d--~v~~~~~~~~~----~-----------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
+ +++|+++.... . ..|+.. .+.++..+++.+...++|+ |+.... .+..+.
T Consensus 77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-----~~~~~~ 151 (251)
T PRK06924 77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-----NPYFGW 151 (251)
T ss_pred ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc-----CCCCCc
Confidence 1 67888875321 0 134444 3444454544331346665 443221 122223
Q ss_pred CchhhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEE---eCCCCcceeeeeHHHH
Q 021470 132 RVTFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL---LGDGNPKAIYVDEDDI 199 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~D~ 199 (312)
..|..+|..++.+.+. .++++..++||.+..+........ ....... .........+.+++|+
T Consensus 152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dv 226 (251)
T PRK06924 152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSS-----SKEDFTNLDRFITLKEEGKLLSPEYV 226 (251)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhc-----CcccchHHHHHHHHhhcCCcCCHHHH
Confidence 4455599998887652 256778889998765543211000 0000000 0000011236789999
Q ss_pred HHHHHHHhcCCccC
Q 021470 200 AMYTMKAINDPRTL 213 (312)
Q Consensus 200 a~~~~~~l~~~~~~ 213 (312)
|+.++.++..+...
T Consensus 227 a~~~~~l~~~~~~~ 240 (251)
T PRK06924 227 AKALRNLLETEDFP 240 (251)
T ss_pred HHHHHHHHhcccCC
Confidence 99999999874333
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.9e-13 Score=110.61 Aligned_cols=206 Identities=16% Similarity=0.139 Sum_probs=124.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+. .+.+. ..++..+++|+.|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRN-----QEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999997 333321 12222 2357789999999988877654
Q ss_pred --cCCEEEEcCCCCccc-----------------------------cchhHhHH----HHHHHHHHhCCCceeec-CCCC
Q 021470 75 --LVDVVICAISGVHIR-----------------------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEFG 118 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~-----------------------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g 118 (312)
++|++||+++..... ..|+.... .++..+++.+ ..++|+ |+..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~ 163 (278)
T PRK08277 85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMN 163 (278)
T ss_pred cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccch
Confidence 689999999853210 13444443 3344444444 456665 4433
Q ss_pred CCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce
Q 021470 119 TDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA 191 (312)
Q Consensus 119 ~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (312)
... +..+...|..+|..++.+.+. .++++..++||.+.......+...... ................
T Consensus 164 ~~~-----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~p~~ 237 (278)
T PRK08277 164 AFT-----PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDG-SLTERANKILAHTPMG 237 (278)
T ss_pred hcC-----CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccc-cchhHHHHHhccCCcc
Confidence 221 112233455599998877763 368888999998876532221110000 0000000000011122
Q ss_pred eeeeHHHHHHHHHHHhcC-Cc-c-CCceEEec
Q 021470 192 IYVDEDDIAMYTMKAIND-PR-T-LNRTMYLR 220 (312)
Q Consensus 192 ~~v~~~D~a~~~~~~l~~-~~-~-~~~~~~~~ 220 (312)
.+...+|+|++++.++.. .. . .|..+.+.
T Consensus 238 r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vd 269 (278)
T PRK08277 238 RFGKPEELLGTLLWLADEKASSFVTGVVLPVD 269 (278)
T ss_pred CCCCHHHHHHHHHHHcCccccCCcCCCEEEEC
Confidence 456789999999998876 32 2 35555664
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-13 Score=113.14 Aligned_cols=207 Identities=14% Similarity=0.084 Sum_probs=126.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++|+||+|+||+.+++.|++.|++ |++++|+ +++.+ ....+. ...+.++.+|+.+++++.++++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRN-----AEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCC-----HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999988 9999987 32222 112222 2356778999999988887765
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... ..|+....++++++... +...++|+ |+....... ....
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~ 155 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----PFLA 155 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----CCcc
Confidence 579999999864311 14566667777766542 21234664 443322111 1123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++.++.++||.+........ .......................+++.+|+++++..
T Consensus 156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 234 (260)
T PRK06198 156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRI-QREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAF 234 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhh-hhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHH
Confidence 555699998887763 357778889988765432110 000000000000000001112346799999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.++. ..|+.+.+.
T Consensus 235 l~~~~~~~~~G~~~~~~ 251 (260)
T PRK06198 235 LLSDESGLMTGSVIDFD 251 (260)
T ss_pred HcChhhCCccCceEeEC
Confidence 987553 235666654
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-12 Score=109.49 Aligned_cols=208 Identities=18% Similarity=0.081 Sum_probs=124.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||++++++|+++|++|++++|+ +++.+.+......++.++++|+.|++++.++++ +
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERS-----AEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK 80 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999998 444433222223468899999999988887764 5
Q ss_pred CCEEEEcCCCCccc-------------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCc
Q 021470 76 VDVVICAISGVHIR-------------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|++||+++..... ..|+.....+++++...- .-.++|+ |+...... ..+...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~ 155 (263)
T PRK06200 81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP-----GGGGPL 155 (263)
T ss_pred CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----CCCCch
Confidence 89999999864210 145555566666655321 0134554 43222111 111234
Q ss_pred hhhhHHHHHHHHHH------hCCCeEEEecccccccccccCCC-CC--ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQ-PG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. .++.+..+.||++...+...... .. ....................+...+|+|.++.
T Consensus 156 Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~ 235 (263)
T PRK06200 156 YTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV 235 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence 66699998877764 24677778898876543221100 00 00000000000011111224668899999999
Q ss_pred HHhcCC-c--cCCceEEec
Q 021470 205 KAINDP-R--TLNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~-~--~~~~~~~~~ 220 (312)
.++..+ . ..|..+.+.
T Consensus 236 fl~s~~~~~~itG~~i~vd 254 (263)
T PRK06200 236 LLASRRNSRALTGVVINAD 254 (263)
T ss_pred heecccccCcccceEEEEc
Confidence 998754 2 235555554
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.9e-13 Score=109.11 Aligned_cols=195 Identities=14% Similarity=0.145 Sum_probs=122.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-HHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-QSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~l~~~~~~~d~v~~ 81 (312)
.++++||||+|+||+++++.|+++|++|+++.|+.... ...++..+.+|+.++ +.+.+.+.++|++||
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 47899999999999999999999999999999874221 134678899999887 555555567999999
Q ss_pred cCCCCcc----c-----------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 82 AISGVHI----R-----------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 82 ~~~~~~~----~-----------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
+++.... . ..|+....++++++.. .+ ..++++ |+....... .....|..+|..+
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y~~sK~a~ 147 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAG-----GGGAAYTASKHAL 147 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----CCCcccHHHHHHH
Confidence 9985321 0 1566666777776653 33 346665 442221111 1123556699887
Q ss_pred HHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--c
Q 021470 142 RKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--T 212 (312)
Q Consensus 142 e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~ 212 (312)
+.+.+. .+++++.++||.+............. .. .. .........+...+|+|+++..++.+.. .
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~-~~---~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~ 221 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGG--LA-DW---VARETPIKRWAEPEEVAELTLFLASGKADYM 221 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchH--HH-HH---HhccCCcCCCCCHHHHHHHHHHHcChhhccC
Confidence 766553 47889999999876543211000000 00 00 0001112346789999999999986542 2
Q ss_pred CCceEEec
Q 021470 213 LNRTMYLR 220 (312)
Q Consensus 213 ~~~~~~~~ 220 (312)
.+..+.+.
T Consensus 222 ~g~~~~~~ 229 (235)
T PRK06550 222 QGTIVPID 229 (235)
T ss_pred CCcEEEEC
Confidence 34555554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.2e-13 Score=115.24 Aligned_cols=155 Identities=19% Similarity=0.303 Sum_probs=102.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||.++++.|+++|++|++++|+ .++.+. .+.+. ...+.++++|+.|.+++.++++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRN-----LKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999998 444322 12221 2367889999999998888775
Q ss_pred --cCCEEEEcCCCCcc---------------ccchhHhHHHHHHHHHH----hCC-Cceeec-CCCCCCc----c-----
Q 021470 75 --LVDVVICAISGVHI---------------RSHQILLQLKLVDAIKE----AGN-VKRFLP-SEFGTDP----A----- 122 (312)
Q Consensus 75 --~~d~v~~~~~~~~~---------------~~~~~~~~~~l~~aa~~----~~~-v~~~v~-S~~g~~~----~----- 122 (312)
++|++||+++.... ..+|+.++.++++++.. .+. ..++|+ |+..... .
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~ 160 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence 38999999985321 01566666666666554 321 246665 4422110 0
Q ss_pred ---cc------------------cccCCCCCchhhhHHHHHHHH----HH----hCCCeEEEecccccc
Q 021470 123 ---KM------------------ANAMEPGRVTFDDKMVVRKAI----ED----AGIPFTYVSANCFAG 162 (312)
Q Consensus 123 ---~~------------------~~~~~p~~~~~~~K~~~e~~~----~~----~~~~~~i~r~~~~~~ 162 (312)
.. ..+..|...|..+|...+.+. ++ .++.++.++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 00 012234455666998754433 33 367888899998853
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8e-13 Score=110.25 Aligned_cols=202 Identities=17% Similarity=0.153 Sum_probs=125.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|.||++++++|++.|++|++++|+ +++.+. .+.+. ..++.++.+|++|++++.++++
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRS-----QEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999999998 333221 12222 2356788999999998888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||+++..... ..|+.+..++++++... +.-.+++. |+...... ......|..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----~~~~~~Y~a 159 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----MPMQAHVCA 159 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----CCCccHHHH
Confidence 479999999743211 16677777887776642 10135554 44322111 111234445
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccc-cccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAG-YFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+|..++.+++. .+++++.++|+.+.+ ......... ...............+...+|+|++++.++.
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS------PELQAAVAQSVPLKRNGTKQDIANAALFLAS 233 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC------HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99998888764 467788899997753 211111000 0000000000111235678999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
.+. ..|..+.+.|
T Consensus 234 ~~~~~~~G~~~~~~g 248 (264)
T PRK07576 234 DMASYITGVVLPVDG 248 (264)
T ss_pred hhhcCccCCEEEECC
Confidence 642 2355556643
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=112.00 Aligned_cols=195 Identities=12% Similarity=0.078 Sum_probs=120.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|.||.+++++|++.|++|+++.|+ +.+.+ ..+.+. ...+.++.+|+.|++++.++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 75 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLN-----EETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF 75 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 479999999999999999999999999999987 32221 222232 2357889999999998888764
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+.....+++++. +.+.-.++|+ |+....... .....|
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y 150 (254)
T TIGR02415 76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----PILSAY 150 (254)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----CCCcch
Confidence 479999999864321 145555554544443 3331245664 543322111 113455
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEE------eCCCCcceeeeeHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL------LGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~D~a~ 201 (312)
..+|..++.+.+. .++.+..++||.+............ ........ +........+++++|+++
T Consensus 151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 227 (254)
T TIGR02415 151 SSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEET---SEIAGKPIGEGFEEFSSEIALGRPSEPEDVAG 227 (254)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhh---hhcccCchHHHHHHHHhhCCCCCCCCHHHHHH
Confidence 5699998877753 3677888999987554322111100 00000000 000011124678899999
Q ss_pred HHHHHhcCCc
Q 021470 202 YTMKAINDPR 211 (312)
Q Consensus 202 ~~~~~l~~~~ 211 (312)
++..++..+.
T Consensus 228 ~~~~l~~~~~ 237 (254)
T TIGR02415 228 LVSFLASEDS 237 (254)
T ss_pred HHHhhccccc
Confidence 9999998753
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-12 Score=107.01 Aligned_cols=179 Identities=11% Similarity=0.005 Sum_probs=114.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCC--HHHHHHHh---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFND--YQSLVNAV--- 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d--~~~l~~~~--- 73 (312)
.++++||||+|++|+++++.|+++|++|++++|+ +++.+. .+.+ ....+..+.+|+.+ .+++.+++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARH-----QKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC-----hHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 4789999999999999999999999999999998 333321 1222 12356778899865 33444432
Q ss_pred -----ccCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCccccccc
Q 021470 74 -----KLVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANA 127 (312)
Q Consensus 74 -----~~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~ 127 (312)
..+|+|||+++.... . ..|+.+..++++++.. .+ ..++++ |+ .+.. +
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~------~ 153 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGET------P 153 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEecccccc------C
Confidence 357999999996321 1 2566666666666543 33 345554 43 2221 1
Q ss_pred CCCCCchhhhHHHHHHHHHH-------h-CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------A-GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~-~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
......|..+|..++.+++. . ++++..++||.+.......... +.....+...+|+
T Consensus 154 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~----------------~~~~~~~~~~~~~ 217 (239)
T PRK08703 154 KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP----------------GEAKSERKSYGDV 217 (239)
T ss_pred CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC----------------CCCccccCCHHHH
Confidence 11123455699998888653 1 4778888999887653221110 0111135689999
Q ss_pred HHHHHHHhcC
Q 021470 200 AMYTMKAIND 209 (312)
Q Consensus 200 a~~~~~~l~~ 209 (312)
+..+..++..
T Consensus 218 ~~~~~~~~~~ 227 (239)
T PRK08703 218 LPAFVWWASA 227 (239)
T ss_pred HHHHHHHhCc
Confidence 9999999874
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-12 Score=122.50 Aligned_cols=209 Identities=13% Similarity=0.044 Sum_probs=124.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh----ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF----KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l----~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|++.|++|++++|+ .++.+.. +.+ ....+..+++|++|++++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~-----~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN-----LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 3333221 222 12356789999999999988876
Q ss_pred ----cCCEEEEcCCCCcccc--------------chhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIRS--------------HQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~--------------~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++...... .|+..... ++..+++.+.-.++|+ |+....... ...
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~-----~~~ 563 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG-----KNA 563 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----CCC
Confidence 6899999999654211 33333333 3344444331235665 543322111 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccc-ccc-cc-CCCCCcc--CCCCCe-eEEeCCCCcceeeeeHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAG-YFL-GG-LCQPGSI--LPSKDS-VVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~-~~~-~~-~~~~~~~--~~~~~~-~~~~~~~~~~~~~v~~~D 198 (312)
..|..+|..++.+.+. .++++..+.|+.+.. ..+ .. ....... ...... ...+........+++.+|
T Consensus 564 ~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peD 643 (676)
T TIGR02632 564 SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPAD 643 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHH
Confidence 3555599998887763 367888889987752 111 10 0000000 000000 000111222235688999
Q ss_pred HHHHHHHHhcCCc--cCCceEEecC
Q 021470 199 IAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 199 ~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+|+++..++.... ..|.++++.|
T Consensus 644 VA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 644 IAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred HHHHHHHHhCCcccCCcCcEEEECC
Confidence 9999999886532 2356666653
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-12 Score=109.67 Aligned_cols=189 Identities=12% Similarity=0.069 Sum_probs=120.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCCh--HHH-HHhhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI--EKV-QMLLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~-~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+...... .+. ...+.+. ..++.++++|+++++++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 85 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV 85 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997532100 011 1111121 3457889999999998888765
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+.+..++++++... + -.+++. |+..... .....+.
T Consensus 86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~---~~~~~~~ 161 (273)
T PRK08278 86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLD---PKWFAPH 161 (273)
T ss_pred HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcc---ccccCCc
Confidence 689999999864321 15677778888887642 2 234543 4322111 1001223
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEeccc-ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANC-FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..|..+|..++.+++. .++.+..+.|+. +......... .+. .....+...+|+|+++
T Consensus 162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~-------~~~--------~~~~~~~~p~~va~~~ 226 (273)
T PRK08278 162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL-------GGD--------EAMRRSRTPEIMADAA 226 (273)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc-------ccc--------ccccccCCHHHHHHHH
Confidence 4566699999888764 367788888884 3222211110 000 0112356889999999
Q ss_pred HHHhcCC
Q 021470 204 MKAINDP 210 (312)
Q Consensus 204 ~~~l~~~ 210 (312)
+.++..+
T Consensus 227 ~~l~~~~ 233 (273)
T PRK08278 227 YEILSRP 233 (273)
T ss_pred HHHhcCc
Confidence 9998765
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-12 Score=107.76 Aligned_cols=172 Identities=15% Similarity=0.088 Sum_probs=110.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++||||+|+||+++++.|+++|++|++++|+... ... . ........+.+|++|.+++.+.+.++|++||+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~----~~~--~-~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN----NSE--S-NDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh----hhh--h-hccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 4789999999999999999999999999999997411 111 1 11122367889999999999988899999999
Q ss_pred CCCCccc-----------cchhHhHHHHHHHHHHh-------CCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHH
Q 021470 83 ISGVHIR-----------SHQILLQLKLVDAIKEA-------GNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 83 ~~~~~~~-----------~~~~~~~~~l~~aa~~~-------~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~ 144 (312)
+|..... ..|+.+..++++++... +....++.|+.+... +. ....|..+|..++.+
T Consensus 87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----~~-~~~~Y~aSKaal~~~ 160 (245)
T PRK12367 87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----PA-LSPSYEISKRLIGQL 160 (245)
T ss_pred CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----CC-CCchhHHHHHHHHHH
Confidence 9864311 26777777777776542 101223444332211 11 123455599987432
Q ss_pred H---H-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 145 I---E-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 145 ~---~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
. + ..++.++.+.||.+...+ . ....+..+|+|+.++..+.+++
T Consensus 161 ~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~------------~------------~~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 161 VSLKKNLLDKNERKKLIIRKLILGPFRSEL------------N------------PIGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHhhcccccEEEEecCCCccccc------------C------------ccCCCCHHHHHHHHHHHHhcCC
Confidence 2 1 134555556666532111 0 0124678999999999997764
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.6e-13 Score=110.50 Aligned_cols=206 Identities=9% Similarity=0.033 Sum_probs=120.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhc----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
++++||||+|.||+++++.|+++|++|++++|+ +++.+. .+.+. ..++..+.+|++|++++.++++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRD-----EERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999998 333321 12221 2357789999999988877654
Q ss_pred ---cCCEEEEcCCCCcccc--------------chhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIRS--------------HQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~~--------------~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++...... .|+.. ++.++..+++.+ ..++|+ |+....... ....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~ 157 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPE-----PHMV 157 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCC-----CCch
Confidence 5799999998643210 23333 344455555544 456665 443321111 1123
Q ss_pred chhhhHHHHHHHHH-------HhCCCeEEEecccccccccccCCC-CCccCCCCCee--EEe-CCCCcceeeeeHHHHHH
Q 021470 133 VTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQ-PGSILPSKDSV--VLL-GDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 133 ~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~-~~~~~~~~~v~~~D~a~ 201 (312)
.|..+|..++.+.+ ..|+++..+.||.+.......... ........... ... ...-....+...+|+|+
T Consensus 158 ~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~ 237 (265)
T PRK07062 158 ATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAAR 237 (265)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHH
Confidence 44448887766554 257889999999876543221100 00000000000 000 00001123567899999
Q ss_pred HHHHHhcCCc-c-CCceEEec
Q 021470 202 YTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~-~-~~~~~~~~ 220 (312)
+++.++.... . .|..+.+.
T Consensus 238 ~~~~L~s~~~~~~tG~~i~vd 258 (265)
T PRK07062 238 ALFFLASPLSSYTTGSHIDVS 258 (265)
T ss_pred HHHHHhCchhcccccceEEEc
Confidence 9999887532 2 34555554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.7e-13 Score=109.97 Aligned_cols=200 Identities=12% Similarity=0.077 Sum_probs=123.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||..+++.|+++|++|++++|+ +++.+ ..+.+. ...+.++++|+.|.+++.++++
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN-----QEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999988 43332 112222 3457789999999888776655
Q ss_pred --cCCEEEEcCCCCcc------------c-----------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccc
Q 021470 75 --LVDVVICAISGVHI------------R-----------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKM 124 (312)
Q Consensus 75 --~~d~v~~~~~~~~~------------~-----------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~ 124 (312)
++|+|||+++.... . ..|+.....+.+ ...+...-..+++ |+.+.. .
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~-- 156 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-G-- 156 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-C--
Confidence 47999999985321 0 133444433333 3333221124554 443321 1
Q ss_pred cccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHH
Q 021470 125 ANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDED 197 (312)
Q Consensus 125 ~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 197 (312)
..+...|..+|..++.+++. .+++++.++||.+........... .............+.+.+
T Consensus 157 ---~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 225 (253)
T PRK08217 157 ---NMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE--------ALERLEKMIPVGRLGEPE 225 (253)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH--------HHHHHHhcCCcCCCcCHH
Confidence 11224455599988777553 478899999998865533211000 000000111122456899
Q ss_pred HHHHHHHHHhcCCccCCceEEecC
Q 021470 198 DIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 198 D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
|+++++..++......|.++++.|
T Consensus 226 ~~a~~~~~l~~~~~~~g~~~~~~g 249 (253)
T PRK08217 226 EIAHTVRFIIENDYVTGRVLEIDG 249 (253)
T ss_pred HHHHHHHHHHcCCCcCCcEEEeCC
Confidence 999999999976544567777764
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.1e-12 Score=107.58 Aligned_cols=196 Identities=12% Similarity=0.117 Sum_probs=118.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+++++||||+|.||+++++.|+++|++|++++|+.... . +.+...+++++.+|+.|++++.++++ +
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA----I---DGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH----H---HHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 47999999999999999999999999999999974321 1 22333468899999999988877654 4
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhC-CCceeec-CCCCCCcccccccCCCCCchh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
+|++||+++..... ..|+.....+.+++. +.+ ...++|+ |+...... ......|.
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~~~~Y~ 149 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----SDKHIAYA 149 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----CCCCccHH
Confidence 89999999864211 134444444333333 222 0135554 44332111 11123556
Q ss_pred hhHHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 136 DDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 136 ~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
.+|..++.+.+. .++++..+.||.+...... .... .. . .... ....-+...+|+++++..++..
T Consensus 150 asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~~--~~--~--~~~~-~~~~~~~~~~~va~~~~~l~~~ 219 (236)
T PRK06483 150 ASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAAY--RQ--K--ALAK-SLLKIEPGEEEIIDLVDYLLTS 219 (236)
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHHH--HH--H--Hhcc-CccccCCCHHHHHHHHHHHhcC
Confidence 699999888764 2467777888876321100 0000 00 0 0000 0011234689999999999975
Q ss_pred CccCCceEEec
Q 021470 210 PRTLNRTMYLR 220 (312)
Q Consensus 210 ~~~~~~~~~~~ 220 (312)
.-..|..+.+.
T Consensus 220 ~~~~G~~i~vd 230 (236)
T PRK06483 220 CYVTGRSLPVD 230 (236)
T ss_pred CCcCCcEEEeC
Confidence 43445666664
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=7e-13 Score=123.13 Aligned_cols=199 Identities=12% Similarity=0.010 Sum_probs=123.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|.++|++|++++|+ .++.+.. +.+. ..++.++.+|++|++++.++++
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDID-----EAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999998 3333221 2222 2357889999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||++|..... +.|+.+..++++++. +.+.-.++|. ||...... ......
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~~~~~ 464 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP-----SRSLPA 464 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----CCCCcH
Confidence 479999999975421 156666666666643 3331136665 54332211 112345
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|++++.+.||.+-..+.......+........................+|+|+.++.+
T Consensus 465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~ 544 (582)
T PRK05855 465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDA 544 (582)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHH
Confidence 66699988776543 47899999999886654332111100000000000000000001224678999999999
Q ss_pred hcCCc
Q 021470 207 INDPR 211 (312)
Q Consensus 207 l~~~~ 211 (312)
+..++
T Consensus 545 ~~~~~ 549 (582)
T PRK05855 545 VKRNK 549 (582)
T ss_pred HHcCC
Confidence 88764
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-12 Score=111.42 Aligned_cols=192 Identities=15% Similarity=0.077 Sum_probs=122.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||..+++.|.+.|++|++++|+ .++.+.. +.+. ...+..+++|++|.+++.++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLE-----EAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998 5444322 2232 2235556699999988877654
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++... + ..++|. |+.+..... .....|.
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~ 157 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAA-----PGMAAYC 157 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCC-----CCchHHH
Confidence 589999999974321 15667777777776542 2 245664 543322111 1123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC-CCcceeeeeHHHHHHHHHHHh
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD-GNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+|..++.+.+. .++.+..+.||++............ ..... +... ......+...+|+++++..++
T Consensus 158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~---~~~~~--~~~~~~~p~~~~~~~~~va~~i~~~~ 232 (296)
T PRK05872 158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADL---PAFRE--LRARLPWPLRRTTSVEKCAAAFVDGI 232 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccc---hhHHH--HHhhCCCcccCCCCHHHHHHHHHHHH
Confidence 599998877653 5788889999987654332211000 00000 0000 001124578999999999998
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
.+.
T Consensus 233 ~~~ 235 (296)
T PRK05872 233 ERR 235 (296)
T ss_pred hcC
Confidence 765
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-12 Score=107.76 Aligned_cols=203 Identities=10% Similarity=0.052 Sum_probs=124.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||++++++|++.|++|++++|... .+..+.+..+ ...+..+++|+.|.+++.++++ +
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP---TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch---HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999998876521 2222222222 3457789999999988888775 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+....++++++... +.-.++|+ |+....... .....|..
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~Y~~ 160 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-----IRVPSYTA 160 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-----CCCcchHH
Confidence 89999999864321 15677777777766542 21134554 432211111 11124555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+.......+... .......... -....+...+|+|+.+..++.+
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-----~~~~~~~~~~-~p~~r~~~p~eva~~~~~l~s~ 234 (253)
T PRK08993 161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-----EQRSAEILDR-IPAGRWGLPSDLMGPVVFLASS 234 (253)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-----hHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCc
Confidence 99998777653 478888999999876543221100 0000000000 0012366789999999999976
Q ss_pred Cc-c-CCceEEec
Q 021470 210 PR-T-LNRTMYLR 220 (312)
Q Consensus 210 ~~-~-~~~~~~~~ 220 (312)
.. . .|..+.+.
T Consensus 235 ~~~~~~G~~~~~d 247 (253)
T PRK08993 235 ASDYINGYTIAVD 247 (253)
T ss_pred cccCccCcEEEEC
Confidence 52 2 34555553
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.7e-13 Score=120.77 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=129.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|+++|++|+++.|+ +++.+.+.......+..+.+|++|++++.++++ +
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRD-----AEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGR 343 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999997 444433322223456778999999998888775 4
Q ss_pred CCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 76 VDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 76 ~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
+|++||+++.... . +.|+.+..++++++...- .-.++|+ |+...... ..+...|..+|
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asK 418 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----LPPRNAYCASK 418 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----CCCCchhHHHH
Confidence 7999999986421 0 156777777777766531 0235654 54332211 12234555699
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .|+++..+.||.+........... .......+........+..++|+|++++.++..+.
T Consensus 419 aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~ 493 (520)
T PRK06484 419 AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-----GRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAA 493 (520)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-----cHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 998877653 478889999998865543221100 00000000000011135689999999999987542
Q ss_pred --cCCceEEec
Q 021470 212 --TLNRTMYLR 220 (312)
Q Consensus 212 --~~~~~~~~~ 220 (312)
..|+.+.+.
T Consensus 494 ~~~~G~~i~vd 504 (520)
T PRK06484 494 SYVNGATLTVD 504 (520)
T ss_pred cCccCcEEEEC
Confidence 235566664
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=107.89 Aligned_cols=181 Identities=10% Similarity=0.054 Sum_probs=114.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc---cCCCeEEEccCC--CHHHHHHHh---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK---EQGAKLVSGSFN--DYQSLVNAV--- 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~--d~~~l~~~~--- 73 (312)
.++++||||+|+||.++++.|++.|++|++++|+ +++.+. .+.+. ..++.++.+|++ +.+++.+++
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGATVILLGRT-----EEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 433321 12222 235678888885 555544443
Q ss_pred ----ccCCEEEEcCCCCccc---------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCC
Q 021470 74 ----KLVDVVICAISGVHIR---------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 74 ----~~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
.++|+|||+++..... ..|+.+..++++++ .+.+ ..++|+ |+....... .
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~-----~ 160 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR-----A 160 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC-----C
Confidence 3689999999864210 15566666666655 4455 677775 543322111 1
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
....|..+|..++.+++. .++++..++|+.+.......... . .....+...+|++++
T Consensus 161 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-------~---------~~~~~~~~~~~~~~~ 224 (247)
T PRK08945 161 NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP-------G---------EDPQKLKTPEDIMPL 224 (247)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC-------c---------ccccCCCCHHHHHHH
Confidence 123455599988887653 25667778888764331110000 0 001135688999999
Q ss_pred HHHHhcCC
Q 021470 203 TMKAINDP 210 (312)
Q Consensus 203 ~~~~l~~~ 210 (312)
+..++.++
T Consensus 225 ~~~~~~~~ 232 (247)
T PRK08945 225 YLYLMGDD 232 (247)
T ss_pred HHHHhCcc
Confidence 99988654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-13 Score=111.64 Aligned_cols=193 Identities=12% Similarity=0.059 Sum_probs=117.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------- 74 (312)
||+++||||+|+||+++++.|++.|++|++++|+... .. ......++.++++|+.|.+++.+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-----~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-----SL--AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-----hh--hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 4599999999999999999999999999999997431 10 11123468889999999988887442
Q ss_pred ---cCCEEEEcCCCCccc---------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR---------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~---------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
+.|++||+++..... ..|+.+...+ ++.+.+.+ ..++|+ |+.+... +..+.
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~~~~~ 147 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARN-----AYAGW 147 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcC-----CCCCc
Confidence 468999999864310 1455554444 44444444 457775 5543221 11223
Q ss_pred CchhhhHHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeE-EeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV-LLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+++. .++++..++||.+-.+......... ....... .+.........+..+|+|+.++
T Consensus 148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 224 (243)
T PRK07023 148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATD---EERFPMRERFRELKASGALSTPEDAARRLI 224 (243)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcc---cccchHHHHHHHhhhcCCCCCHHHHHHHHH
Confidence 3455599999888863 3677888999987554322110000 0000000 0000000123567889999777
Q ss_pred HHhcCCc
Q 021470 205 KAINDPR 211 (312)
Q Consensus 205 ~~l~~~~ 211 (312)
..+..+.
T Consensus 225 ~~l~~~~ 231 (243)
T PRK07023 225 AYLLSDD 231 (243)
T ss_pred HHHhccc
Confidence 7776654
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.5e-13 Score=110.01 Aligned_cols=201 Identities=10% Similarity=0.029 Sum_probs=124.3
Q ss_pred CCcEEEEEcCCc-hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhh----ccCCCeEEEccCCCHHHHHHHhc-
Q 021470 2 EKSKVLIIGGTG-YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSF----KEQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 2 ~~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l----~~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
..++++||||+| .||+++++.|+++|++|++++|+ .++.+ ..+.+ ...++.++++|+.+++++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 90 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH-----ERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDA 90 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 357899999998 69999999999999999999887 33322 11222 12357889999999988887765
Q ss_pred ------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccC
Q 021470 75 ------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAM 128 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~ 128 (312)
++|++||+++..... ..|+.....+++++.. .+.-.++|. |+ .+... .
T Consensus 91 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~------~ 164 (262)
T PRK07831 91 AVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA------Q 164 (262)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC------C
Confidence 579999999864311 1455555555555543 220134554 33 33211 1
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.+...|..+|..++.+.+. .++++..++||.+...+....... .....+........+...+|+|+
T Consensus 165 ~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~p~~va~ 237 (262)
T PRK07831 165 HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA-------ELLDELAAREAFGRAAEPWEVAN 237 (262)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH-------HHHHHHHhcCCCCCCcCHHHHHH
Confidence 1223455599998888763 468888999998876543221000 00000000111123567899999
Q ss_pred HHHHHhcCCc-c-CCceEEec
Q 021470 202 YTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~-~-~~~~~~~~ 220 (312)
+++.++.... . .|+.+.+.
T Consensus 238 ~~~~l~s~~~~~itG~~i~v~ 258 (262)
T PRK07831 238 VIAFLASDYSSYLTGEVVSVS 258 (262)
T ss_pred HHHHHcCchhcCcCCceEEeC
Confidence 9999887642 2 34555553
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.7e-13 Score=107.68 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=101.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-----LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-----~~d 77 (312)
|++++||||+|++|+++++.|+++|++|++++|+... .+....+ .++.++.+|+.|++++.++++ ++|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~id 73 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ-----DTALQAL--PGVHIEKLDMNDPASLDQLLQRLQGQRFD 73 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc-----hHHHHhc--cccceEEcCCCCHHHHHHHHHHhhcCCCC
Confidence 4789999999999999999999999999999998432 2222222 367888999999988887765 589
Q ss_pred EEEEcCCCCccc----------------cchhHhHHHHHHHHHHhC--CCceeec--CCCCCCcccccccCCCCCchhhh
Q 021470 78 VVICAISGVHIR----------------SHQILLQLKLVDAIKEAG--NVKRFLP--SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 78 ~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~~--~v~~~v~--S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
+|||+++..... ..|+.....+++++...- ...++++ |.+|..... +..+...|..+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~---~~~~~~~Y~~s 150 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP---DGGEMPLYKAS 150 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC---CCCCccchHHH
Confidence 999999864210 145555666666665321 0234443 444432211 11122345569
Q ss_pred HHHHHHHHHH-------hCCCeEEEeccccccc
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGY 163 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~ 163 (312)
|..++.+.+. .++.+..++||++-..
T Consensus 151 K~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 151 KAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 9998888764 3566778889876543
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.3e-12 Score=111.30 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=111.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+++++||||+|+||++++++|.++|++|++++|+ +++.+....-...++..+.+|++|++++.+.+.++|++||+
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~-----~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSN-----SDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 5789999999999999999999999999999987 33322111111234678899999999999999999999999
Q ss_pred CCCCccc-----------cchhHhHHHHHHHHHH----hCC--Cc-eeecCCCCCCcccccccCCCCCc-hhhhHHHHHH
Q 021470 83 ISGVHIR-----------SHQILLQLKLVDAIKE----AGN--VK-RFLPSEFGTDPAKMANAMEPGRV-TFDDKMVVRK 143 (312)
Q Consensus 83 ~~~~~~~-----------~~~~~~~~~l~~aa~~----~~~--v~-~~v~S~~g~~~~~~~~~~~p~~~-~~~~K~~~e~ 143 (312)
+|..... +.|+.+..++++++.. .+. .+ .++.++-+. . .+ +..+ |..+|..+..
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~---~--~~--~~~~~Y~ASKaAl~~ 325 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE---V--NP--AFSPLYELSKRALGD 325 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc---c--cC--CCchHHHHHHHHHHH
Confidence 9864311 2677777777777653 220 11 234332111 1 11 2234 5559999877
Q ss_pred HHH--H--hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 144 AIE--D--AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 144 ~~~--~--~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+.. . .+..+..+.||.+... + .+...++.+|+|+.++..+.+++
T Consensus 326 l~~l~~~~~~~~I~~i~~gp~~t~----~--------------------~~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 326 LVTLRRLDAPCVVRKLILGPFKSN----L--------------------NPIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHhCCCCceEEEEeCCCcCC----C--------------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence 543 2 2222333333321100 0 01124688999999999998774
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-12 Score=106.52 Aligned_cols=201 Identities=15% Similarity=0.119 Sum_probs=123.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|.||+++++.|+++|++|++++|+ +++.+.. +.+. ...+.++++|++|++++.++++
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRT-----KEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF 76 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999998 3333221 2221 2467889999999988887664
Q ss_pred -cCCEEEEcCCCCcc--------------ccchhHhHHHHHHHHHHh----CCCceeec-C-CCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI--------------RSHQILLQLKLVDAIKEA----GNVKRFLP-S-EFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~--------------~~~~~~~~~~l~~aa~~~----~~v~~~v~-S-~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... -+.|+....++++++.+. +.-.++++ | .++.... .....
T Consensus 77 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------~~~~~ 150 (252)
T PRK07677 77 GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------PGVIH 150 (252)
T ss_pred CCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------CCCcc
Confidence 57999999985321 015666677777777432 21235554 3 3332111 11234
Q ss_pred hhhhHHHHHHHHHH--------hCCCeEEEecccccccc-cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED--------AGIPFTYVSANCFAGYF-LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~--------~~~~~~i~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. .|+++..++||.+.... ...... ...........-....+...+|+++++.
T Consensus 151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~ 224 (252)
T PRK07677 151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE------SEEAAKRTIQSVPLGRLGTPEEIAGLAY 224 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC------CHHHHHHHhccCCCCCCCCHHHHHHHHH
Confidence 55599887776652 36788889999876321 111000 0000000000001123668899999998
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++..+. ..|..+.+.|
T Consensus 225 ~l~~~~~~~~~g~~~~~~g 243 (252)
T PRK07677 225 FLLSDEAAYINGTCITMDG 243 (252)
T ss_pred HHcCccccccCCCEEEECC
Confidence 8887542 2345555543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.5e-12 Score=106.51 Aligned_cols=202 Identities=13% Similarity=0.100 Sum_probs=124.3
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+ +.||+.++++|++.|++|++..|+ ....+..+.+....+..+++|++|++++.++++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-----DRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-----hHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4789999999 799999999999999999999886 222222334444568899999999988887654
Q ss_pred -cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . +.|+.....+.+++...- .-.++|. |+.+..... .....
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-----~~~~~ 156 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI-----PNYNV 156 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC-----Ccchh
Confidence 48999999986421 0 145555555555554321 0134543 443322111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|+.+..|.||.+........... . ..............+...+|+|+++..+
T Consensus 157 Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~-----~-~~~~~~~~~~p~~r~~~pedva~~~~~l 230 (252)
T PRK06079 157 MGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH-----K-DLLKESDSRTVDGVGVTIEEVGNTAAFL 230 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh-----H-HHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence 55599998877653 478889999998865433211100 0 0000000000112367789999999999
Q ss_pred hcCC-cc-CCceEEec
Q 021470 207 INDP-RT-LNRTMYLR 220 (312)
Q Consensus 207 l~~~-~~-~~~~~~~~ 220 (312)
+... .. .|+++.+.
T Consensus 231 ~s~~~~~itG~~i~vd 246 (252)
T PRK06079 231 LSDLSTGVTGDIIYVD 246 (252)
T ss_pred hCcccccccccEEEeC
Confidence 9764 22 34555554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-12 Score=106.36 Aligned_cols=198 Identities=11% Similarity=0.010 Sum_probs=120.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++.+|..... .....+.+. ..++..+++|+.|.+++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~---~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g 88 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALD---ASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG 88 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhH---HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999988753211 111222232 2457789999999988887764
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--------C-C-Cceeec-CCCCCCcccccccCC
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--------G-N-VKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--------~-~-v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++..... ..|+.+..++++++... + . -.++|+ |+....... .
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~ 163 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP-----V 163 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-----C
Confidence 589999999875421 15666777777766421 0 0 125554 432221111 1
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
....|..+|..++.+.+. .|+.+..+.|+. .......... ..... . .........+|++.+
T Consensus 164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~-------~~~~~-~---~~~~~~~~pe~va~~ 231 (306)
T PRK07792 164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFG-------DAPDV-E---AGGIDPLSPEHVVPL 231 (306)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcc-------ccchh-h---hhccCCCCHHHHHHH
Confidence 123455599998877653 467788888873 2111111000 00000 0 011234578999999
Q ss_pred HHHHhcCCc--cCCceEEec
Q 021470 203 TMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~ 220 (312)
+..++.... ..|+.+.+.
T Consensus 232 v~~L~s~~~~~~tG~~~~v~ 251 (306)
T PRK07792 232 VQFLASPAAAEVNGQVFIVY 251 (306)
T ss_pred HHHHcCccccCCCCCEEEEc
Confidence 998886532 235555554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=107.81 Aligned_cols=194 Identities=14% Similarity=0.057 Sum_probs=118.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|.||+++++.|+++|++|++..|+.... .....+.+. ..++.++.+|++|.+++.++++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEE---ANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999888853211 111112222 2356788999999998887764
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... ..|+... +.++..+.+.+.-.++|+ |+.... .+..+...|
T Consensus 84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----~~~~~~~~Y 158 (261)
T PRK08936 84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----IPWPLFVHY 158 (261)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----CCCCCCccc
Confidence 579999999864321 1343333 344555555441235554 443221 112223456
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .+++++.++||.+........... ..... . .........+...+|+++++..++
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~----~~~~~-~-~~~~~~~~~~~~~~~va~~~~~l~ 232 (261)
T PRK08936 159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD----PKQRA-D-VESMIPMGYIGKPEEIAAVAAWLA 232 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC----HHHHH-H-HHhcCCCCCCcCHHHHHHHHHHHc
Confidence 6699777665543 478899999998765532211000 00000 0 000011124667899999999998
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
..+
T Consensus 233 s~~ 235 (261)
T PRK08936 233 SSE 235 (261)
T ss_pred Ccc
Confidence 754
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=105.02 Aligned_cols=174 Identities=15% Similarity=0.143 Sum_probs=115.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-----LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-----~~d 77 (312)
|++++||||+|.||+++++.|++.|++|++++|+ +++.+ .+...+++++++|++|.+++.+++. ++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~-----~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARD-----AAALA---ALQALGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECC-----HHHHH---HHHhccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 4789999999999999999999999999999998 44432 2334467889999999998888642 489
Q ss_pred EEEEcCCCCccc----------------cchhHhHHHHHHHHHHh--CCCceeec-CC-CCCCcccccccCCCCCchhhh
Q 021470 78 VVICAISGVHIR----------------SHQILLQLKLVDAIKEA--GNVKRFLP-SE-FGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 78 ~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~~~~ 137 (312)
++||+++..... ..|+..+.++++++... ..-.++++ |+ .+..... +..+...|..+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~~~Y~~s 149 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---TGTTGWLYRAS 149 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---cCCCccccHHh
Confidence 999999875210 15667778888777642 10123443 43 3322111 11122346669
Q ss_pred HHHHHHHHHHh-----CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIEDA-----GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~~-----~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..++.+++.. +++++.++||++...... + ...+..++.+..+..++...
T Consensus 150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------------~--~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 150 KAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------------A--QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred HHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------------C--CCCCCHHHHHHHHHHHHHhc
Confidence 99998887753 455677777765433210 0 12357788888888876543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.7e-12 Score=119.93 Aligned_cols=181 Identities=15% Similarity=0.177 Sum_probs=122.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|+.|.+++.++++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARN-----GEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998 4443221 2222 3468889999999999888776
Q ss_pred ---cCCEEEEcCCCCccc----------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 ---LVDVVICAISGVHIR----------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... ..|+.+..+++++ +++.+ ..++|+ |+.+..... ..
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~ 518 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNA-----PR 518 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCC-----CC
Confidence 589999999864210 1455554444444 44455 567775 554332111 11
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++.++.++||.+...+..... . . ......+.+++|+.+
T Consensus 519 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~----------~---~----~~~~~~~~~~~a~~i 581 (657)
T PRK07201 519 FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK----------R---Y----NNVPTISPEEAADMV 581 (657)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc----------c---c----cCCCCCCHHHHHHHH
Confidence 23455599998877653 5799999999987654332110 0 0 012457899999999
Q ss_pred HHHhcCC
Q 021470 204 MKAINDP 210 (312)
Q Consensus 204 ~~~l~~~ 210 (312)
+..+...
T Consensus 582 ~~~~~~~ 588 (657)
T PRK07201 582 VRAIVEK 588 (657)
T ss_pred HHHHHhC
Confidence 9987654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-12 Score=106.17 Aligned_cols=207 Identities=11% Similarity=0.051 Sum_probs=124.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHHHHHHHhc---c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQSLVNAVK---L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~~l~~~~~---~ 75 (312)
.++++||||+|.+|+++++.|++.|++|++++|+ +++.+.. +.+. ..++.++.+|++|++++.++++ +
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD-----ADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence 3789999999999999999999999999999998 4443321 2222 3457889999999999888775 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.....+++++ ++.+ -.++|+ |+..... +......|..
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~~~y~a 155 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGEN-----PDADYICGSA 155 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccC-----CCCCchHhHH
Confidence 89999999864321 14555555555554 4433 245554 4322211 1111223344
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCC-CccCC-CCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQP-GSILP-SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+|..++.+.+. .++++..+.||.+........... ..... .......+........+..++|+|++++.++
T Consensus 156 sk~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 235 (259)
T PRK06125 156 GNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA 235 (259)
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHc
Confidence 88887776653 478889999998865532211100 00000 0000000000001123568899999999998
Q ss_pred cCCc--cCCceEEec
Q 021470 208 NDPR--TLNRTMYLR 220 (312)
Q Consensus 208 ~~~~--~~~~~~~~~ 220 (312)
.+.. ..|..+.+.
T Consensus 236 ~~~~~~~~G~~i~vd 250 (259)
T PRK06125 236 SPRSGYTSGTVVTVD 250 (259)
T ss_pred CchhccccCceEEec
Confidence 7542 234555554
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.6e-12 Score=107.06 Aligned_cols=207 Identities=16% Similarity=0.071 Sum_probs=122.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|++.|++|++++|+ .++.+.+.......+..+++|+.|.+++.++++ +
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS-----AAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK 79 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999999999997 444432222223457889999999988777664 5
Q ss_pred CCEEEEcCCCCcc-------------------ccchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCc
Q 021470 76 VDVVICAISGVHI-------------------RSHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 ~d~v~~~~~~~~~-------------------~~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|++||+++.... ...|+.....+++++...- .-.++|+ |+..... +......
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-----~~~~~~~ 154 (262)
T TIGR03325 80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-----PNGGGPL 154 (262)
T ss_pred CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-----CCCCCch
Confidence 7999999985310 0145666677777775431 0123443 3322111 1111234
Q ss_pred hhhhHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCCCCeeE---EeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV---LLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. . .+++..+.||.+.......... ........... ..........+...+|+|+++.
T Consensus 155 Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~ 233 (262)
T TIGR03325 155 YTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSL-GMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYV 233 (262)
T ss_pred hHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCcccccc-ccccccccccchhhhhhhcCCCCCCCChHHhhhhee
Confidence 55599999887764 1 2556677888876543321100 00000000000 0000001123567899999998
Q ss_pred HHhcCCc--c-CCceEEec
Q 021470 205 KAINDPR--T-LNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~--~-~~~~~~~~ 220 (312)
.++.++. . .|..+.+.
T Consensus 234 ~l~s~~~~~~~tG~~i~vd 252 (262)
T TIGR03325 234 FFATRGDTVPATGAVLNYD 252 (262)
T ss_pred eeecCCCcccccceEEEec
Confidence 8887532 2 34555554
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.3e-14 Score=108.14 Aligned_cols=192 Identities=21% Similarity=0.171 Sum_probs=138.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAIS 84 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~ 84 (312)
..++.|++||.|.++++.....++.|..+.|+.... .++. ....+.++++|.....-+...+.++..++-+++
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~------~l~s-w~~~vswh~gnsfssn~~k~~l~g~t~v~e~~g 126 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ------TLSS-WPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMG 126 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc------hhhC-CCcccchhhccccccCcchhhhcCCcccHHHhc
Confidence 568899999999999999999999999999985432 1121 245688889988777667777889999998888
Q ss_pred CCccc----cchhHhHHHHHHHHHHhCCCceeec-CC--CCCCcccccccCCCCCchhhhHHHHHHHHHH-hCCCeEEEe
Q 021470 85 GVHIR----SHQILLQLKLVDAIKEAGNVKRFLP-SE--FGTDPAKMANAMEPGRVTFDDKMVVRKAIED-AGIPFTYVS 156 (312)
Q Consensus 85 ~~~~~----~~~~~~~~~l~~aa~~~~~v~~~v~-S~--~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-~~~~~~i~r 156 (312)
..... ..|-....+.+.+|+++| +++|+| |. +|...- .| ..|+.+|+++|..+.+ .+.+-+++|
T Consensus 127 gfgn~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~~------i~-rGY~~gKR~AE~Ell~~~~~rgiilR 198 (283)
T KOG4288|consen 127 GFGNIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPPL------IP-RGYIEGKREAEAELLKKFRFRGIILR 198 (283)
T ss_pred CccchHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCCc------cc-hhhhccchHHHHHHHHhcCCCceeec
Confidence 76532 255666788899999999 999998 43 433222 22 5799999999988875 678889999
Q ss_pred cccccccc--cccCCCCC---------ccC--CCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 157 ANCFAGYF--LGGLCQPG---------SIL--PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 157 ~~~~~~~~--~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
||++++.- ........ ... .....+++.+ .-..+.+.++++|.++++++++|+..
T Consensus 199 PGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve~VA~aal~ai~dp~f~ 266 (283)
T KOG4288|consen 199 PGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVESVALAALKAIEDPDFK 266 (283)
T ss_pred cceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHHHHHHHHHHhccCCCcC
Confidence 99999851 10000000 000 1122233333 45578999999999999999999754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.3e-12 Score=104.93 Aligned_cols=187 Identities=11% Similarity=0.046 Sum_probs=117.5
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
|+||||+|+||.++++.|+++|++|.+++|+.... .....+.+. ..++.++++|++|.+++.++++ +.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSD---AESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999988763211 111222232 3458899999999988877765 46
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHH-----HhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIK-----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~-----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
|+++|+++..... ..|+....++++++. +.+ ..++|+ |+....... .....|..
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----~~~~~Y~~ 151 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN-----RGQVNYSA 151 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC-----CCCcchHH
Confidence 9999999864321 155666777777652 233 356664 543221111 11234555
Q ss_pred hHHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+ ..+++++.++||.+...+....... .... .. ......+...+|+++++..++..
T Consensus 152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~---~~-~~~~~~~~~~~~va~~~~~l~~~ 222 (239)
T TIGR01831 152 AKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD-----LDEA---LK-TVPMNRMGQPAEVASLAGFLMSD 222 (239)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH-----HHHH---Hh-cCCCCCCCCHHHHHHHHHHHcCc
Confidence 8887665544 2478889999998766543321110 0000 00 00112355789999999999886
Q ss_pred C
Q 021470 210 P 210 (312)
Q Consensus 210 ~ 210 (312)
+
T Consensus 223 ~ 223 (239)
T TIGR01831 223 G 223 (239)
T ss_pred h
Confidence 4
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1e-11 Score=104.12 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=123.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++|||| |+||+++++.|. +|++|++++|+ +++.+ ..+.+.. .++.++++|+.|++++.++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~ 74 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYN-----EENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTL 74 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCC-----HHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhc
Confidence 368899997 799999999996 79999999997 33332 2233332 357789999999988888765
Q ss_pred -cCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHh----CCCceeecCCCCCCcccc-------------c----
Q 021470 75 -LVDVVICAISGVHIR-------SHQILLQLKLVDAIKEA----GNVKRFLPSEFGTDPAKM-------------A---- 125 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~----~~v~~~v~S~~g~~~~~~-------------~---- 125 (312)
++|++||+++..... +.|+.++.++++++... + ...++.|+.+...... .
T Consensus 75 g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g-~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (275)
T PRK06940 75 GPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGG-AGVVIASQSGHRLPALTAEQERALATTPTEELLS 153 (275)
T ss_pred CCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCC-CEEEEEecccccCcccchhhhccccccccccccc
Confidence 589999999975321 26777777877777653 3 2222234333211100 0
Q ss_pred c----cC---CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce
Q 021470 126 N----AM---EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA 191 (312)
Q Consensus 126 ~----~~---~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (312)
. +. .+...|..+|..++.+.+. .++.+..+.||.+........... ................
T Consensus 154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~~ 229 (275)
T PRK06940 154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG----PRGDGYRNMFAKSPAG 229 (275)
T ss_pred cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC----CchHHHHHHhhhCCcc
Confidence 0 00 1123455599997766542 468888899998765432211000 0000000000000112
Q ss_pred eeeeHHHHHHHHHHHhcCC-cc-CCceEEec
Q 021470 192 IYVDEDDIAMYTMKAINDP-RT-LNRTMYLR 220 (312)
Q Consensus 192 ~~v~~~D~a~~~~~~l~~~-~~-~~~~~~~~ 220 (312)
.+...+|+|+++..++... .. .|..+.+.
T Consensus 230 r~~~peeia~~~~fL~s~~~~~itG~~i~vd 260 (275)
T PRK06940 230 RPGTPDEIAALAEFLMGPRGSFITGSDFLVD 260 (275)
T ss_pred cCCCHHHHHHHHHHHcCcccCcccCceEEEc
Confidence 3678899999999998653 22 34555554
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-11 Score=101.83 Aligned_cols=205 Identities=9% Similarity=0.056 Sum_probs=121.3
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+ +.||++++++|++.|++|++..|+... .++.+ ..+.+...++..+++|++|++++.++++
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL--EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc--hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4689999997 899999999999999999998875322 22222 2222333467889999999988887764
Q ss_pred --cCCEEEEcCCCCcc-------cc-----------chhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-------RS-----------HQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-------~~-----------~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... .+ .|+.....+++++...- .-.++|. |+...... .....
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~ 159 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-----VQNYN 159 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-----CCCCc
Confidence 48999999985421 01 33444444455544321 0135554 44332111 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .|+.+..|.||.+........... .. .............+...+|+|++++.
T Consensus 160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-----~~-~~~~~~~~~p~~r~~~p~~va~~~~~ 233 (257)
T PRK08594 160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF-----NS-ILKEIEERAPLRRTTTQEEVGDTAAF 233 (257)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc-----cH-HHHHHhhcCCccccCCHHHHHHHHHH
Confidence 455599998877653 478888899998765432111000 00 00000000011235678999999999
Q ss_pred HhcCCc-c-CCceEEec
Q 021470 206 AINDPR-T-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~ 220 (312)
++.... . .|..+.+.
T Consensus 234 l~s~~~~~~tG~~~~~d 250 (257)
T PRK08594 234 LFSDLSRGVTGENIHVD 250 (257)
T ss_pred HcCcccccccceEEEEC
Confidence 987543 2 34555553
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.8e-12 Score=105.70 Aligned_cols=142 Identities=12% Similarity=0.046 Sum_probs=100.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ...++..+++|++|++++.++++ +
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999874322 13467889999999998888765 4
Q ss_pred CCEEEEcCCCCcc-----------------------ccchhHhHHHHHHHHHHh----CCCceeec-CCCCCCccccccc
Q 021470 76 VDVVICAISGVHI-----------------------RSHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 76 ~d~v~~~~~~~~~-----------------------~~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~ 127 (312)
+|++||+++.... ...|+.....+++++... + -.++|+ |+.......
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---- 152 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGS---- 152 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC----
Confidence 7999999985321 014566666777766643 2 245665 443321111
Q ss_pred CCCCCchhhhHHHHHHHHHH-------hCCCeEEEeccccc
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFA 161 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~ 161 (312)
.....|..+|..++.+.+. .++++..++||.+.
T Consensus 153 -~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 -EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 1123455599988877653 47888999999874
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.2e-12 Score=109.15 Aligned_cols=158 Identities=15% Similarity=0.147 Sum_probs=101.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc----cCCCeEEEccCCCHHHHHHHhc--
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK----EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
+.++++||||+|.||.+++++|+++|++|++++|+ .++.+ ..+.+. ..++.++++|+.|.++++++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~-----~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN-----RAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 45799999999999999999999999999999998 44332 112221 2357889999999988887764
Q ss_pred -----cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHHH---hCCCceeec-CCCCCCccc-----c--c
Q 021470 75 -----LVDVVICAISGVHIR-------------SHQILLQLKLVDAIKE---AGNVKRFLP-SEFGTDPAK-----M--A 125 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~---~~~v~~~v~-S~~g~~~~~-----~--~ 125 (312)
++|++||+++..... .+|+.+...+.+.+.. .+ -.++|. |+....... . .
T Consensus 88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccccc
Confidence 489999999865321 1455554444444431 22 245554 432211110 0 1
Q ss_pred ccCCCCCchhhhHHHHHHHHHH---------hCCCeEEEeccccccccc
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFL 165 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~ 165 (312)
.+..+...|..+|...+.+.+. .++.+..+.||.+...+.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~ 215 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL 215 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence 1222333455599887666542 246677788998765543
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.3e-11 Score=97.87 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=117.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d~v 79 (312)
|+++||||+|.||+++++.|+++|++|+++.|+ .++..... ...+++++++|+.|++++.++++ ++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~-----~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGAR-----RDDLEVAA--KELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH--HhccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 379999999999999999999999999999998 44442211 12257889999999999988775 58999
Q ss_pred EEcCCCCc---------c--c--------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 80 ICAISGVH---------I--R--------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 80 ~~~~~~~~---------~--~--------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
||+++... . . +.|+.....+++++...= .-.++|. |+... .+...|..+|
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------~~~~~Y~asK 144 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------PAGSAEAAIK 144 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------CCccccHHHH
Confidence 99987311 0 0 145555566666654320 0134554 44331 1124566699
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .++++..+.||.+....... .. . .+.-..+|+++++..++..+.
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~--------~~----------~--~p~~~~~~ia~~~~~l~s~~~ 204 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG--------LS----------R--TPPPVAAEIARLALFLTTPAA 204 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh--------cc----------C--CCCCCHHHHHHHHHHHcCchh
Confidence 998777653 46778888998764321100 00 0 011278999999999987542
Q ss_pred -c-CCceEEec
Q 021470 212 -T-LNRTMYLR 220 (312)
Q Consensus 212 -~-~~~~~~~~ 220 (312)
. .|+.+.+.
T Consensus 205 ~~v~G~~i~vd 215 (223)
T PRK05884 205 RHITGQTLHVS 215 (223)
T ss_pred hccCCcEEEeC
Confidence 2 34555554
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=111.25 Aligned_cols=201 Identities=12% Similarity=0.086 Sum_probs=124.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||..+++.|.++|++|++++|+.. .++.. +.....+...+++|++|++++.++++ +
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~---~~~l~--~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA---GEALA--AVANRVGGTALALDITAPDAPARIAEHLAERHGG 284 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc---HHHHH--HHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999988522 12221 11122356788999999988887765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCC---Cceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGN---VKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~---v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
+|+|||+++..... ..|+....++.+++..... -.++|+ |+....... .....|..+
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-----~~~~~Y~as 359 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-----RGQTNYAAS 359 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----CCChHHHHH
Confidence 89999999965321 1677788888888876430 145664 543221111 112345559
Q ss_pred HHHHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..++.+.+ ..++.+..+.||.+-......... ... .....+ +........+|+++++..++...
T Consensus 360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-~~~-~~~~~~------~~l~~~~~p~dva~~~~~l~s~~ 431 (450)
T PRK08261 360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-ATR-EAGRRM------NSLQQGGLPVDVAETIAWLASPA 431 (450)
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-hHH-HHHhhc------CCcCCCCCHHHHHHHHHHHhChh
Confidence 987665554 257888899999865332211100 000 000000 01112235679999999988653
Q ss_pred c--cCCceEEecC
Q 021470 211 R--TLNRTMYLRP 221 (312)
Q Consensus 211 ~--~~~~~~~~~~ 221 (312)
. ..|+.+.++|
T Consensus 432 ~~~itG~~i~v~g 444 (450)
T PRK08261 432 SGGVTGNVVRVCG 444 (450)
T ss_pred hcCCCCCEEEECC
Confidence 2 2356667764
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-12 Score=105.02 Aligned_cols=199 Identities=10% Similarity=0.014 Sum_probs=115.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc---cCCCeEEEccCCCHHHH----HHHh--
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK---EQGAKLVSGSFNDYQSL----VNAV-- 73 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~~~l----~~~~-- 73 (312)
++++||||+|+||+++++.|+++|++|+++.|+.. ++.. ..+.+. ...+..+.+|++|.+++ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~ 77 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA----AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDA 77 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH----HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHH
Confidence 57999999999999999999999999999876532 2221 122232 23466789999998654 3332
Q ss_pred -----ccCCEEEEcCCCCccc-------------------------cchhHhHHHHHHHHHHhC---------CCceeec
Q 021470 74 -----KLVDVVICAISGVHIR-------------------------SHQILLQLKLVDAIKEAG---------NVKRFLP 114 (312)
Q Consensus 74 -----~~~d~v~~~~~~~~~~-------------------------~~~~~~~~~l~~aa~~~~---------~v~~~v~ 114 (312)
.++|++||+++..... ..|+.....+++++.... ....++.
T Consensus 78 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~ 157 (267)
T TIGR02685 78 CFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN 157 (267)
T ss_pred HHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence 3689999999863210 134445555655544321 0113332
Q ss_pred -CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC
Q 021470 115 -SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD 186 (312)
Q Consensus 115 -S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (312)
++.... .+..+...|..+|..++.+.+. .|++++.++||.+..+.. ... .......... ..
T Consensus 158 ~~s~~~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~--~~~-~~~~~~~~~~---~~ 226 (267)
T TIGR02685 158 LCDAMTD-----QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA--MPF-EVQEDYRRKV---PL 226 (267)
T ss_pred ehhhhcc-----CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc--cch-hHHHHHHHhC---CC
Confidence 222111 1122234566699998877763 478899999998642210 000 0000000000 00
Q ss_pred CCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEec
Q 021470 187 GNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 187 ~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
...+...+|++++++.++..+. ..|..+.+.
T Consensus 227 ---~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~ 259 (267)
T TIGR02685 227 ---GQREASAEQIADVVIFLVSPKAKYITGTCIKVD 259 (267)
T ss_pred ---CcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence 0134688999999999987642 235555554
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.9e-11 Score=101.75 Aligned_cols=205 Identities=16% Similarity=0.128 Sum_probs=119.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc-cCCCeEEEccCCCHHHHHHHhc-------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK-EQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~-~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
|+++||||+|.||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRN-----EENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 589999999999999999999999999999998 433321 12222 2367889999999998887764
Q ss_pred cCCEEEEcCCCCcc-----cc-----------chhHh----HHHHHHHHH-HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 LVDVVICAISGVHI-----RS-----------HQILL----QLKLVDAIK-EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ~~d~v~~~~~~~~~-----~~-----------~~~~~----~~~l~~aa~-~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... .+ .|+.. ...++.... +.+ -.++|+ |+..... +..+..
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~ 149 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKE-----PMPPLV 149 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCC-----CCCCch
Confidence 58999999986421 01 12222 222333333 222 346665 4433211 112223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccccccccc-CC---CC-CccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGG-LC---QP-GSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~-~~---~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.|..+|..++.+.+. .|+.+..+.||.+-...... .. .. .............. ......+...+|+|
T Consensus 150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dva 228 (259)
T PRK08340 150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLE-RTPLKRTGRWEELG 228 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhc-cCCccCCCCHHHHH
Confidence 444599988877664 35777778888875543211 00 00 00000000000000 00112356789999
Q ss_pred HHHHHHhcCCc-c-CCceEEec
Q 021470 201 MYTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 201 ~~~~~~l~~~~-~-~~~~~~~~ 220 (312)
+++..++..+. . .|.++.+.
T Consensus 229 ~~~~fL~s~~~~~itG~~i~vd 250 (259)
T PRK08340 229 SLIAFLLSENAEYMLGSTIVFD 250 (259)
T ss_pred HHHHHHcCcccccccCceEeec
Confidence 99999988642 2 34444554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.4e-11 Score=99.36 Aligned_cols=184 Identities=16% Similarity=0.201 Sum_probs=114.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc---CCCeEEEccCCCHHHHHHHhc-----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE---QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+++||||++.||.+++++|. +|++|++++|+ .++.+.+ +.+.. ..+.++++|+.|++++.++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 74 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARR-----PEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL 74 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCC-----HHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence 579999999999999999998 59999999998 3333222 22322 247789999999988877654
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHH----HHHHHHHhCCCceeec-CC-CCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLK----LVDAIKEAGNVKRFLP-SE-FGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~----l~~aa~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++...... .|...... ++....+.+.-.++|. |+ .+.... ....
T Consensus 75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------~~~~ 148 (246)
T PRK05599 75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR------RANY 148 (246)
T ss_pred cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC------cCCc
Confidence 5899999998753210 22223322 2333433321135554 44 332211 1123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++.+..+.||.+......... .. +. ....+|+|++++.
T Consensus 149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~--------~~----------~~-~~~pe~~a~~~~~ 209 (246)
T PRK05599 149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK--------PA----------PM-SVYPRDVAAAVVS 209 (246)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC--------CC----------CC-CCCHHHHHHHHHH
Confidence 455599888776653 4677778888877654321100 00 00 2478999999999
Q ss_pred HhcCCccCCceEEe
Q 021470 206 AINDPRTLNRTMYL 219 (312)
Q Consensus 206 ~l~~~~~~~~~~~~ 219 (312)
++..+.. ++.+.+
T Consensus 210 ~~~~~~~-~~~~~~ 222 (246)
T PRK05599 210 AITSSKR-STTLWI 222 (246)
T ss_pred HHhcCCC-CceEEe
Confidence 9988643 344555
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-11 Score=99.10 Aligned_cols=154 Identities=19% Similarity=0.196 Sum_probs=103.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhccC-CCeEEEccCCCHHHHHHHh-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKEQ-GAKLVSGSFNDYQSLVNAV------- 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~-~~~~v~~D~~d~~~l~~~~------- 73 (312)
.+.|+||||++.||.+++.+|.++|.+++.+.|.... .++. +.++.+.+. ++.++++|++|.+++.+++
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rr--l~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARR--LERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhh--HHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999988888777443 3333 333333344 4999999999999998765
Q ss_pred ccCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec--CCCCCCcccccccCCCCC-
Q 021470 74 KLVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP--SEFGTDPAKMANAMEPGR- 132 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~--S~~g~~~~~~~~~~~p~~- 132 (312)
.++|+++|+||..... ++|+.+ ++.++...++.+ -.|+|. |..|.... |..
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~-------P~~~ 161 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPL-------PFRS 161 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCC-------Cccc
Confidence 3799999999976521 155555 455555556655 346654 44444322 223
Q ss_pred chhhhHHHHHHHHHHh-------CCCeE-EEecccccccccc
Q 021470 133 VTFDDKMVVRKAIEDA-------GIPFT-YVSANCFAGYFLG 166 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~~-------~~~~~-i~r~~~~~~~~~~ 166 (312)
.|..+|.+++.+.+.. +.... .+-||++-..+..
T Consensus 162 ~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~ 203 (282)
T KOG1205|consen 162 IYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTG 203 (282)
T ss_pred ccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccc
Confidence 4555999988876542 21122 3678887765544
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-11 Score=97.02 Aligned_cols=171 Identities=19% Similarity=0.195 Sum_probs=113.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v~ 80 (312)
|+++||||+|.||+++++.|.++ ++|++++|+.. .+++|+.|+++++++++ ++|++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~lv 60 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKVDAVV 60 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCCCEEE
Confidence 48999999999999999999999 99999998721 36899999999988876 689999
Q ss_pred EcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++..... ..|+....++++++... + -.++++ |+..... +......|..+|..++.
T Consensus 61 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~~-----~~~~~~~Y~~sK~a~~~ 134 (199)
T PRK07578 61 SAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSDE-----PIPGGASAATVNGALEG 134 (199)
T ss_pred ECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccCC-----CCCCchHHHHHHHHHHH
Confidence 999864321 14566667777777643 2 234554 4322211 11112345559988877
Q ss_pred HHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceE
Q 021470 144 AIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217 (312)
Q Consensus 144 ~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~ 217 (312)
+.+. .++.+..+.||.+-...... ... .. + ..++..+|+|+++..+++.. ..|+++
T Consensus 135 ~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~----------~~~---~~-~---~~~~~~~~~a~~~~~~~~~~-~~g~~~ 196 (199)
T PRK07578 135 FVKAAALELPRGIRINVVSPTVLTESLEKY----------GPF---FP-G---FEPVPAARVALAYVRSVEGA-QTGEVY 196 (199)
T ss_pred HHHHHHHHccCCeEEEEEcCCcccCchhhh----------hhc---CC-C---CCCCCHHHHHHHHHHHhccc-eeeEEe
Confidence 6653 36777788888764432100 000 01 1 23578999999999998764 234444
Q ss_pred E
Q 021470 218 Y 218 (312)
Q Consensus 218 ~ 218 (312)
.
T Consensus 197 ~ 197 (199)
T PRK07578 197 K 197 (199)
T ss_pred c
Confidence 3
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.1e-11 Score=100.43 Aligned_cols=201 Identities=15% Similarity=0.082 Sum_probs=119.0
Q ss_pred CcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++|||| ++.||+++++.|+++|++|++..|.... .++. +.+.. .....+++|++|++++.++++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL--EERV---RKMAAELDSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHH--HHHH---HHHHhccCCceEEECCCCCHHHHHHHHHHHHH
Confidence 478999997 6799999999999999999988775211 2222 22221 235678999999988888764
Q ss_pred ---cCCEEEEcCCCCcc--------cc-----------chhHhHHHHHHHHHH---hCCCceeec-CCCCCCcccccccC
Q 021470 75 ---LVDVVICAISGVHI--------RS-----------HQILLQLKLVDAIKE---AGNVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~--------~~-----------~~~~~~~~l~~aa~~---~~~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|++||+++.... .+ .|+.....+.+++.. .+ -.++|. |+.+.... .
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~-----~ 154 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRA-----I 154 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccC-----C
Confidence 58999999986431 00 233333344443332 11 134554 55443211 1
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+....|..+|..++.+.+. .|+++..+.||.+........... ...............+...+|+|+
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~peevA~ 228 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF------GKLLGHVAAHNPLRRNVTIEEVGN 228 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch------HHHHHHHhhcCCCCCCCCHHHHHH
Confidence 1123455599998776553 578888899998865432211100 000000000011123678999999
Q ss_pred HHHHHhcCCc-c-CCceEEec
Q 021470 202 YTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 202 ~~~~~l~~~~-~-~~~~~~~~ 220 (312)
++..++..+. . .|..+.+.
T Consensus 229 ~v~~l~s~~~~~~tG~~i~vd 249 (261)
T PRK08690 229 TAAFLLSDLSSGITGEITYVD 249 (261)
T ss_pred HHHHHhCcccCCcceeEEEEc
Confidence 9999998642 2 34555554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.8e-11 Score=99.83 Aligned_cols=202 Identities=14% Similarity=0.082 Sum_probs=119.0
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-c-CCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-E-QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~-~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||++ .||+.++++|++.|++|++..|+.. ..+..+.+. . .....+++|++|++++.++++
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-----~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-----LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK 81 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-----HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 47899999997 9999999999999999999888621 111112221 1 123578999999988887764
Q ss_pred ---cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++.... . ..|+.....+++++...= .-.++|. |+.+.... .+..
T Consensus 82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~~ 156 (271)
T PRK06505 82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-----MPNY 156 (271)
T ss_pred HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-----CCcc
Confidence 58999999986421 0 145555555555544320 0134554 44322111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .|+++..|.||.+...+....... . ..............+...+|+|++++
T Consensus 157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~-----~-~~~~~~~~~~p~~r~~~peeva~~~~ 230 (271)
T PRK06505 157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA-----R-AIFSYQQRNSPLRRTVTIDEVGGSAL 230 (271)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch-----H-HHHHHHhhcCCccccCCHHHHHHHHH
Confidence 3455599998777653 478888899998765432111000 0 00000000000112457899999999
Q ss_pred HHhcCCc-c-CCceEEec
Q 021470 205 KAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~-~-~~~~~~~~ 220 (312)
.++..+. . .|..+.+.
T Consensus 231 fL~s~~~~~itG~~i~vd 248 (271)
T PRK06505 231 YLLSDLSSGVTGEIHFVD 248 (271)
T ss_pred HHhCccccccCceEEeec
Confidence 9987542 2 34555554
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.4e-11 Score=98.03 Aligned_cols=177 Identities=16% Similarity=0.169 Sum_probs=109.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh---ccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV---KLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~---~~~d~ 78 (312)
|+++||||+|+||++++++|+++| ..|....|+... .....++.++++|++|++++.++. .++|+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~ 70 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDW 70 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc----------ccccCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 489999999999999999999986 556555664221 122457888999999998877654 47899
Q ss_pred EEEcCCCCccc--------------------cchhHhHHHHHHH----HHHhCCCceeec-CC-CCCCcccccccCCCCC
Q 021470 79 VICAISGVHIR--------------------SHQILLQLKLVDA----IKEAGNVKRFLP-SE-FGTDPAKMANAMEPGR 132 (312)
Q Consensus 79 v~~~~~~~~~~--------------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~ 132 (312)
+||++|..... ..|+.....++++ +++.+ ..+++. |+ .+.... .+..+..
T Consensus 71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~---~~~~~~~ 146 (235)
T PRK09009 71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISD---NRLGGWY 146 (235)
T ss_pred EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeeccccccc---CCCCCcc
Confidence 99999975311 0333343334443 33333 345443 43 332211 1112223
Q ss_pred chhhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
.|..+|..++.+.+. .++.+..+.||.+......... . ......+...+|+|+.+
T Consensus 147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~---------~~~~~~~~~~~~~a~~~ 210 (235)
T PRK09009 147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-------Q---------NVPKGKLFTPEYVAQCL 210 (235)
T ss_pred hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------h---------ccccCCCCCHHHHHHHH
Confidence 455599998887763 2455666788876544322110 0 00112357899999999
Q ss_pred HHHhcCC
Q 021470 204 MKAINDP 210 (312)
Q Consensus 204 ~~~l~~~ 210 (312)
..++...
T Consensus 211 ~~l~~~~ 217 (235)
T PRK09009 211 LGIIANA 217 (235)
T ss_pred HHHHHcC
Confidence 9999775
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.9e-11 Score=97.47 Aligned_cols=200 Identities=8% Similarity=0.031 Sum_probs=119.3
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCC------ChHH-HHHhhhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGV------DIEK-VQMLLSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~-~~~~~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.++++||||+| .||++++++|+++|++|++..|..... ..++ .+..+.+. ...+.++++|++|.+++.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~ 85 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE 85 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 47899999995 899999999999999998875431110 0111 11112222 2356788999999998888
Q ss_pred Hhc-------cCCEEEEcCCCCccc--------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCccccc
Q 021470 72 AVK-------LVDVVICAISGVHIR--------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~ 125 (312)
+++ .+|++||+++..... ..|+.....+ +..+++.+ -.++|+ |+.....
T Consensus 86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~---- 160 (256)
T PRK12859 86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG---- 160 (256)
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC----
Confidence 775 379999999864321 1355544444 44444433 346665 4433211
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
+..+...|..+|..++.+.+. .+++++.++||.+...+...... ....... ....+...+|
T Consensus 161 -~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~-------~~~~~~~----~~~~~~~~~d 228 (256)
T PRK12859 161 -PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIK-------QGLLPMF----PFGRIGEPKD 228 (256)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHH-------HHHHhcC----CCCCCcCHHH
Confidence 112234555599998777543 47888899999876543211000 0000000 0113457899
Q ss_pred HHHHHHHHhcCCc-c-CCceEEe
Q 021470 199 IAMYTMKAINDPR-T-LNRTMYL 219 (312)
Q Consensus 199 ~a~~~~~~l~~~~-~-~~~~~~~ 219 (312)
+|+++..++.... . .|+.+.+
T Consensus 229 ~a~~~~~l~s~~~~~~~G~~i~~ 251 (256)
T PRK12859 229 AARLIKFLASEEAEWITGQIIHS 251 (256)
T ss_pred HHHHHHHHhCccccCccCcEEEe
Confidence 9999999887642 2 3444444
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.8e-11 Score=98.98 Aligned_cols=205 Identities=15% Similarity=0.080 Sum_probs=123.0
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|..++++||||+ +.||+++++.|++.|++|++..|+.. . .++.+.+ +.+ .....+++|++|++++.++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~-~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-L-KKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-H-HHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHH
Confidence 335789999997 89999999999999999988877521 1 1222211 112 235678999999988888764
Q ss_pred ----cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.....+++++...- .-.++|. |+.+.... .+.
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~p~ 158 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----MPH 158 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----CCc
Confidence 47999999986421 0 156666667776665431 0134443 55443211 111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++.+..+.||.+............. .... .........+...+|+|+++
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~--~~~~----~~~~~p~~r~~~peevA~~~ 232 (272)
T PRK08159 159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRY--ILKW----NEYNAPLRRTVTIEEVGDSA 232 (272)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchH--HHHH----HHhCCcccccCCHHHHHHHH
Confidence 23455599998777653 46788888999876532211100000 0000 00000111356889999999
Q ss_pred HHHhcCCc-c-CCceEEec
Q 021470 204 MKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~ 220 (312)
+.++.... . .|..+.+.
T Consensus 233 ~~L~s~~~~~itG~~i~vd 251 (272)
T PRK08159 233 LYLLSDLSRGVTGEVHHVD 251 (272)
T ss_pred HHHhCccccCccceEEEEC
Confidence 99997542 2 34555564
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-10 Score=97.11 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=121.1
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+ +.||++++++|++.|++|.+..|+.... . ..+..+.+.. ..+.++++|++|++++.++++
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG-R-FEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc-h-HHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4789999986 7999999999999999998887653211 0 1111222221 246788999999988887764
Q ss_pred ---cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++.... . ..|+.....+.+++...= .-.++|+ |+.+... +....
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----~~~~~ 158 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR-----AIPNY 158 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-----CCccc
Confidence 58999999986421 0 145555555555543210 0135554 4433221 11112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .|+.+..+.||.+........... .. .............+...+|++.++.
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-----~~-~~~~~~~~~p~~r~~~~~dva~~~~ 232 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-----LD-MIHHVEEKAPLRRTVTQTEVGNTAA 232 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-----hh-hhhhhhhcCCcCcCCCHHHHHHHHH
Confidence 3455599998877763 467788899998865432211000 00 0000000011123567899999999
Q ss_pred HHhcCCc-c-CCceEEec
Q 021470 205 KAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 205 ~~l~~~~-~-~~~~~~~~ 220 (312)
.++.++. . .|+.+.+.
T Consensus 233 fl~s~~~~~~tG~~i~vd 250 (258)
T PRK07370 233 FLLSDLASGITGQTIYVD 250 (258)
T ss_pred HHhChhhccccCcEEEEC
Confidence 9987542 2 34555554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.8e-11 Score=98.34 Aligned_cols=202 Identities=12% Similarity=0.067 Sum_probs=118.8
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||++ .||+++++.|++.|++|++..|+.. . .+.. +.+. ...+..+.+|++|++++.++++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~-~~~~---~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 80 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L-KGRV---EEFAAQLGSDIVLPCDVAEDASIDAMFAELGK 80 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H-HHHH---HHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence 47899999985 8999999999999999998887621 1 1222 2221 1346788999999999888774
Q ss_pred ---cCCEEEEcCCCCccc-------------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCC
Q 021470 75 ---LVDVVICAISGVHIR-------------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~-------------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++..... +.|+.+...+.+++... + -.++|. |+.+.... ..
T Consensus 81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~iss~~~~~~-----~~ 154 (262)
T PRK07984 81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERA-----IP 154 (262)
T ss_pred hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-CcEEEEEecCCCCCC-----CC
Confidence 479999999853210 13444444455554321 1 124544 55443211 11
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
....|..+|..++.+.+. .++++..+.||.+........... ...............+...+|++++
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~ 228 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGNS 228 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCch------HHHHHHHHHcCCCcCCCCHHHHHHH
Confidence 123455599998877663 467888888987754321110000 0000000000011245688999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++.... ..|..+.+.|
T Consensus 229 ~~~L~s~~~~~itG~~i~vdg 249 (262)
T PRK07984 229 AAFLCSDLSAGISGEVVHVDG 249 (262)
T ss_pred HHHHcCcccccccCcEEEECC
Confidence 999987642 2355555543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.5e-11 Score=108.46 Aligned_cols=191 Identities=14% Similarity=0.108 Sum_probs=119.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||++.||.++++.|+++|++|+++.|+ .++.+.. +.+ ..++..+++|++|++++.++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN-----VERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFG 78 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999999999998 4333222 222 3467789999999988887764
Q ss_pred cCCEEEEcCCCCcc-----c-----------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 LVDVVICAISGVHI-----R-----------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 ~~d~v~~~~~~~~~-----~-----------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . ..|+.....+++++... +.-.++|. |+....... .....
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-----~~~~~ 153 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-----PKRTA 153 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-----CCCch
Confidence 58999999986211 0 15666666666665543 31125554 443322111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .+++++.+.||.+...+...+..... ..... ....-....+...+|+++++..+
T Consensus 154 Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~va~~v~~l 228 (520)
T PRK06484 154 YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGK--LDPSA---VRSRIPLGRLGRPEEIAEAVFFL 228 (520)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccch--hhhHH---HHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599998877653 47888899999876554322111000 00000 00000011345789999999988
Q ss_pred hcC
Q 021470 207 IND 209 (312)
Q Consensus 207 l~~ 209 (312)
+..
T Consensus 229 ~~~ 231 (520)
T PRK06484 229 ASD 231 (520)
T ss_pred hCc
Confidence 764
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.7e-11 Score=98.68 Aligned_cols=203 Identities=14% Similarity=0.084 Sum_probs=119.8
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+ +.||+++++.|++.|++|++..|+... .++.+.. +.+ ... ..+++|++|.+++.++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~--~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~~~ 80 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL--KKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLKKD 80 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH--HHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999997 799999999999999999999887311 1222211 222 122 678999999988887764
Q ss_pred --cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+...+.+++...= .-.++|. |+.+..... ....
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~-----~~~~ 155 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV-----PHYN 155 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC-----Ccch
Confidence 57999999986321 0 155666555555554321 0124554 554332111 1123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .|+.+..+.||.+........... ...............+...+|+|++++.
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~pl~r~~~pedva~~v~f 229 (274)
T PRK08415 156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDF------RMILKWNEINAPLKKNVSIEEVGNSGMY 229 (274)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchh------hHHhhhhhhhCchhccCCHHHHHHHHHH
Confidence 345599998776653 467888899998754321111000 0000000000011235678999999999
Q ss_pred HhcCC-cc-CCceEEec
Q 021470 206 AINDP-RT-LNRTMYLR 220 (312)
Q Consensus 206 ~l~~~-~~-~~~~~~~~ 220 (312)
++... .. .|..+.+.
T Consensus 230 L~s~~~~~itG~~i~vd 246 (274)
T PRK08415 230 LLSDLSSGVTGEIHYVD 246 (274)
T ss_pred HhhhhhhcccccEEEEc
Confidence 99754 22 34555554
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.5e-11 Score=98.10 Aligned_cols=203 Identities=11% Similarity=0.067 Sum_probs=118.2
Q ss_pred CCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
+.++++||||++ .||+++++.|.++|++|++..|+. ...+..+.+.. ....++++|++|++++.++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-----~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-----VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-----HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence 357899999997 799999999999999999888762 11111222221 123457899999988887764
Q ss_pred ----cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.....+++++...- .-.++|. |+.+.... ...
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----~~~ 156 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-----IPN 156 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----CCc
Confidence 48999999985321 0 144555555555443211 0124554 54433211 111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++.+..+.||.+...+....... ...... .........+...+|+|+++
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-----~~~~~~-~~~~~p~~r~~~pedva~~~ 230 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDF-----STMLKS-HAATAPLKRNTTQEDVGGAA 230 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCc-----HHHHHH-HHhcCCcCCCCCHHHHHHHH
Confidence 23455599988776653 568888899998765432111000 000000 00000112356789999999
Q ss_pred HHHhcCCc-c-CCceEEec
Q 021470 204 MKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~ 220 (312)
+.++..+. . .|..+.+.
T Consensus 231 ~~L~s~~~~~itG~~i~vd 249 (260)
T PRK06603 231 VYLFSELSKGVTGEIHYVD 249 (260)
T ss_pred HHHhCcccccCcceEEEeC
Confidence 99997642 2 24445554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.8e-11 Score=97.61 Aligned_cols=203 Identities=15% Similarity=0.126 Sum_probs=120.2
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+ +.||++++++|++.|++|.+..|+... .++... .+.+ ..+..+++|++|++++.++++
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA--RPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHHHH
Confidence 4789999998 599999999999999999999887321 111111 1122 235678999999988887764
Q ss_pred --cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+...+.+++...- .-.++|. |+.+.... .....
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-----~~~~~ 160 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-----VENYN 160 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-----Cccch
Confidence 57999999986421 0 145555555555554321 0124443 55443211 11122
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++.+..+.||.+............ ..... .........+...+|+|++++.
T Consensus 161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~---~~~~~---~~~~~p~~r~~~p~dva~~~~~ 234 (258)
T PRK07533 161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFD---ALLED---AAERAPLRRLVDIDDVGAVAAF 234 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcH---HHHHH---HHhcCCcCCCCCHHHHHHHHHH
Confidence 344599988776653 4788888999987654322111000 00000 0000111235678999999999
Q ss_pred HhcCC-c-cCCceEEec
Q 021470 206 AINDP-R-TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~-~-~~~~~~~~~ 220 (312)
++..+ . ..|+.+.+.
T Consensus 235 L~s~~~~~itG~~i~vd 251 (258)
T PRK07533 235 LASDAARRLTGNTLYID 251 (258)
T ss_pred HhChhhccccCcEEeeC
Confidence 98763 2 235555553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1e-10 Score=98.65 Aligned_cols=202 Identities=10% Similarity=-0.008 Sum_probs=119.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC----CChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG----VDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
.++++||||++.||+++++.|++.|++|+++.|+... ...++.. ..+.+. ...+.++.+|++|++++.++++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA 85 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence 4789999999999999999999999999998876410 0012221 222332 2356788999999988877664
Q ss_pred ------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCC-----Cceeec-CCCCCCcccc
Q 021470 75 ------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGN-----VKRFLP-SEFGTDPAKM 124 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~-----v~~~v~-S~~g~~~~~~ 124 (312)
++|++||+++..... +.|+.+...+++++. +.+. -.++|+ |+.......
T Consensus 86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~- 164 (286)
T PRK07791 86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS- 164 (286)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC-
Confidence 579999999864311 155666655555553 2210 125554 543321111
Q ss_pred cccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHH
Q 021470 125 ANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDED 197 (312)
Q Consensus 125 ~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 197 (312)
.....|..+|..++.+.+. .|+++..|.|+ +........... .... .. .....+...+
T Consensus 165 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~----~~~~----~~--~~~~~~~~pe 229 (286)
T PRK07791 165 ----VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAE----MMAK----PE--EGEFDAMAPE 229 (286)
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHH----HHhc----Cc--ccccCCCCHH
Confidence 1123455599988776653 57888889997 321111100000 0000 00 1112356799
Q ss_pred HHHHHHHHHhcCCc--cCCceEEec
Q 021470 198 DIAMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 198 D~a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
|+|++++.++.... ..|+.+.+.
T Consensus 230 dva~~~~~L~s~~~~~itG~~i~vd 254 (286)
T PRK07791 230 NVSPLVVWLGSAESRDVTGKVFEVE 254 (286)
T ss_pred HHHHHHHHHhCchhcCCCCcEEEEc
Confidence 99999999987542 235555554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.2e-11 Score=93.47 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=102.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++|+||+|++|.++++.|+++|. .|.++.|+.... .........+. ..++.++.+|+.+++.+.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA-PGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC-ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999995 688888874432 11111112222 3456788999999988887765
Q ss_pred -cCCEEEEcCCCCcc--------------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 75 -LVDVVICAISGVHI--------------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 -~~d~v~~~~~~~~~--------------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
.+|.++|+++.... ...|+....++++++.+.+ .+++++ |+.+..... .....|..+|
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~-----~~~~~y~~sk 153 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN-----PGQANYAAAN 153 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC-----CCchhhHHHH
Confidence 36999999985431 1266778899999997776 677765 443321111 1123455589
Q ss_pred HHHHHHHH---HhCCCeEEEecccc
Q 021470 139 MVVRKAIE---DAGIPFTYVSANCF 160 (312)
Q Consensus 139 ~~~e~~~~---~~~~~~~i~r~~~~ 160 (312)
..++.+.+ ..+++++.+.||.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 154 AFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHHHHHHhcCCceEEEeeccc
Confidence 88888765 35788888887765
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-10 Score=96.46 Aligned_cols=200 Identities=11% Similarity=-0.016 Sum_probs=118.8
Q ss_pred CcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++|||| ++.||.++++.|++.|++|++..|+.. ++..+ ..+.+ ...+..+++|+.|++++.++++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~---~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 82 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA---LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRVREH 82 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc---hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence 378999999 899999999999999999999987631 12221 11222 2367889999999988887754
Q ss_pred --cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . ..|+.....+.+++...= .-.+++. |+.+.. ..|..
T Consensus 83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-------~~~~~ 155 (256)
T PRK07889 83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-------AWPAY 155 (256)
T ss_pred cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-------cCCcc
Confidence 58999999986421 0 144444444555443210 0124443 322211 11222
Q ss_pred -chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcce--eeeeHHHHHHH
Q 021470 133 -VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKA--IYVDEDDIAMY 202 (312)
Q Consensus 133 -~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~D~a~~ 202 (312)
.|..+|..+..+.+. .|+.+..+.||.+...+...+... . .....+. ...+. .+...+|+|++
T Consensus 156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-----~-~~~~~~~-~~~p~~~~~~~p~evA~~ 228 (256)
T PRK07889 156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-----E-LLEEGWD-ERAPLGWDVKDPTPVARA 228 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-----H-HHHHHHH-hcCccccccCCHHHHHHH
Confidence 344599988776653 578888889998765432211100 0 0000000 01111 35689999999
Q ss_pred HHHHhcCCc-c-CCceEEec
Q 021470 203 TMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 203 ~~~~l~~~~-~-~~~~~~~~ 220 (312)
++.++.++. . .+..+.+.
T Consensus 229 v~~l~s~~~~~~tG~~i~vd 248 (256)
T PRK07889 229 VVALLSDWFPATTGEIVHVD 248 (256)
T ss_pred HHHHhCcccccccceEEEEc
Confidence 999987642 2 34445543
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.2e-10 Score=99.71 Aligned_cols=178 Identities=15% Similarity=0.086 Sum_probs=113.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCC--HHHH---HHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFND--YQSL---VNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d--~~~l---~~~ 72 (312)
.+.++||||||.||++++++|+++|++|++++|+ +++.+.. +.+. ...+..+.+|+.+ .+.+ .+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~ 127 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN-----PDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKET 127 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence 3689999999999999999999999999999998 5554322 2222 2346778889974 3333 333
Q ss_pred hcc--CCEEEEcCCCCcc-----c-----------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCC
Q 021470 73 VKL--VDVVICAISGVHI-----R-----------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 73 ~~~--~d~v~~~~~~~~~-----~-----------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
+.+ +|++||++|.... . +.|+.+...+.+++. +.+ ..++|. ||...... +..
T Consensus 128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~----~~~ 202 (320)
T PLN02780 128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVI----PSD 202 (320)
T ss_pred hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccC----CCC
Confidence 444 5699999986421 0 156666666666554 344 456665 44322110 111
Q ss_pred CC-CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 130 PG-RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 130 p~-~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
|. ..|..+|..++.+.+. .|+.++.+.||.+..++... .. ......+.+++|+
T Consensus 203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~---------~~----------~~~~~~~p~~~A~ 263 (320)
T PLN02780 203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI---------RR----------SSFLVPSSDGYAR 263 (320)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc---------cC----------CCCCCCCHHHHHH
Confidence 22 3455599998776653 47888999999876543220 00 0011347899999
Q ss_pred HHHHHhcC
Q 021470 202 YTMKAIND 209 (312)
Q Consensus 202 ~~~~~l~~ 209 (312)
.++..+..
T Consensus 264 ~~~~~~~~ 271 (320)
T PLN02780 264 AALRWVGY 271 (320)
T ss_pred HHHHHhCC
Confidence 99999854
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-10 Score=94.58 Aligned_cols=204 Identities=12% Similarity=0.046 Sum_probs=118.8
Q ss_pred CCcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
+.++++|||| ++.||+++++.|++.|++|++..|.... .++.+.+ +.+ .....+++|++|++++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH--HHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHHH
Confidence 3578999996 6799999999999999999988664211 2222211 112 234578999999998888774
Q ss_pred ---cCCEEEEcCCCCcc--------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCC
Q 021470 75 ---LVDVVICAISGVHI--------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~--------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.....+.+++...= .-.++|. |+.+.... ...
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~-----~~~ 155 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV-----VPN 155 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC-----CCC
Confidence 58999999986421 0 144455555555554321 0134554 55443211 111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..+..+.+. .++.+..+.||.+........... ...............+...+|+++++
T Consensus 156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedva~~~ 229 (260)
T PRK06997 156 YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF------GKILDFVESNAPLRRNVTIEEVGNVA 229 (260)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch------hhHHHHHHhcCcccccCCHHHHHHHH
Confidence 23455599998777653 467888889998754321111000 00000000000111356889999999
Q ss_pred HHHhcCCc--cCCceEEec
Q 021470 204 MKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~ 220 (312)
..++..+. ..|..+.+.
T Consensus 230 ~~l~s~~~~~itG~~i~vd 248 (260)
T PRK06997 230 AFLLSDLASGVTGEITHVD 248 (260)
T ss_pred HHHhCccccCcceeEEEEc
Confidence 99997642 234555553
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.3e-11 Score=99.40 Aligned_cols=193 Identities=12% Similarity=0.045 Sum_probs=113.2
Q ss_pred EEEEEcCCchhhHHHHHHHHh----CCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhcc
Q 021470 5 KVLIIGGTGYLGKRLVKASLA----LGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
.++||||+|.||.+++++|++ .|++|+++.|+ .++.+. .+.+. ...+.++++|++|++++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~ 76 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARN-----DEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA 76 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcC-----HHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence 689999999999999999997 79999999998 333322 12232 23578899999999988877642
Q ss_pred -----------CCEEEEcCCCCcc-----c---c---------chhHhHHHHHHH----HHHh-CCCceeec-CCCCCCc
Q 021470 76 -----------VDVVICAISGVHI-----R---S---------HQILLQLKLVDA----IKEA-GNVKRFLP-SEFGTDP 121 (312)
Q Consensus 76 -----------~d~v~~~~~~~~~-----~---~---------~~~~~~~~l~~a----a~~~-~~v~~~v~-S~~g~~~ 121 (312)
.|++||+++.... . + .|+.+...+.++ .++. +.-.++|+ |+.....
T Consensus 77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~ 156 (256)
T TIGR01500 77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ 156 (256)
T ss_pred HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC
Confidence 2589999985321 0 0 344454444443 3332 21135664 5433211
Q ss_pred ccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeee
Q 021470 122 AKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYV 194 (312)
Q Consensus 122 ~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 194 (312)
. ......|..+|..++.+.+. .++.+..+.||++-..+........ ........+........+.
T Consensus 157 ~-----~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 228 (256)
T TIGR01500 157 P-----FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREES---VDPDMRKGLQELKAKGKLV 228 (256)
T ss_pred C-----CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhc---CChhHHHHHHHHHhcCCCC
Confidence 1 11123455599998877653 3577788889987654332111000 0000000000000112367
Q ss_pred eHHHHHHHHHHHhcCC
Q 021470 195 DEDDIAMYTMKAINDP 210 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~~ 210 (312)
..+|+|+.++.++.+.
T Consensus 229 ~p~eva~~~~~l~~~~ 244 (256)
T TIGR01500 229 DPKVSAQKLLSLLEKD 244 (256)
T ss_pred CHHHHHHHHHHHHhcC
Confidence 8999999999998643
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=5e-10 Score=95.16 Aligned_cols=200 Identities=13% Similarity=0.033 Sum_probs=114.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC-----hHHHH-Hhhhhcc--CCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-----IEKVQ-MLLSFKE--QGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-~~~~l~~--~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.++++||||++.||++++++|++.|++|++++|+..... +++.+ ..+.+.. ..+.++++|+.|++++.++++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 87 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE 87 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 478999999999999999999999999999999743210 11221 1122222 346788999999988887764
Q ss_pred -------cCCEEEEcC-CCC------c-cc-----------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCccc
Q 021470 75 -------LVDVVICAI-SGV------H-IR-----------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAK 123 (312)
Q Consensus 75 -------~~d~v~~~~-~~~------~-~~-----------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~ 123 (312)
++|++||++ +.. . .. ..|+.....+++++. +.+ -.++|. |+.......
T Consensus 88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~~ 166 (305)
T PRK08303 88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYNA 166 (305)
T ss_pred HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCccccccC
Confidence 589999998 631 1 00 123444444444433 332 235554 442211100
Q ss_pred ccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCc-ceeeee
Q 021470 124 MANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNP-KAIYVD 195 (312)
Q Consensus 124 ~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~ 195 (312)
.+......|..+|..+..+.+. .|+.+..|.||++........... .......... ... ..-+..
T Consensus 167 --~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~-~~p~~~~~~~ 239 (305)
T PRK08303 167 --THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGV----TEENWRDALA-KEPHFAISET 239 (305)
T ss_pred --cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhcc----Cccchhhhhc-cccccccCCC
Confidence 0111123455599998777653 468888899998755432110000 0000000000 000 112346
Q ss_pred HHHHHHHHHHHhcCC
Q 021470 196 EDDIAMYTMKAINDP 210 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~ 210 (312)
.+|+|.+++.++.++
T Consensus 240 peevA~~v~fL~s~~ 254 (305)
T PRK08303 240 PRYVGRAVAALAADP 254 (305)
T ss_pred HHHHHHHHHHHHcCc
Confidence 899999999999876
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=9e-10 Score=89.55 Aligned_cols=183 Identities=17% Similarity=0.122 Sum_probs=123.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
...||||||++.+|+.++.+++++|.++.+.+.+..+. .+..+..... ..+....+|++|++++.+..+ .
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~-~etv~~~~~~--g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN-EETVKEIRKI--GEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch-HHHHHHHHhc--CceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999998886665 4444333322 368899999999988877654 5
Q ss_pred CCEEEEcCCCCcccc--------------chhHh----HHHHHHHHHHhCCCceeec--CCCCCCcccccccCCCCCchh
Q 021470 76 VDVVICAISGVHIRS--------------HQILL----QLKLVDAIKEAGNVKRFLP--SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~----~~~l~~aa~~~~~v~~~v~--S~~g~~~~~~~~~~~p~~~~~ 135 (312)
+|+++|+||...... +|+.+ +++++....+.+ -.|+|. |+.|..... ...+|-
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~------gl~~Yc 187 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPA------GLADYC 187 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCc------cchhhh
Confidence 899999999866321 44444 566666666655 467875 665643221 124566
Q ss_pred hhHHHHHHH-------HHH---hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 136 DDKMVVRKA-------IED---AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 136 ~~K~~~e~~-------~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.+|.++.-+ +++ .+++.+.+.|+++-..++.. ..+ -....+.+..+.+|+.+++
T Consensus 188 aSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------~~~------~~~l~P~L~p~~va~~Iv~ 251 (300)
T KOG1201|consen 188 ASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------ATP------FPTLAPLLEPEYVAKRIVE 251 (300)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------CCC------CccccCCCCHHHHHHHHHH
Confidence 688775433 222 34666777776554222221 001 1223578899999999999
Q ss_pred HhcCCc
Q 021470 206 AINDPR 211 (312)
Q Consensus 206 ~l~~~~ 211 (312)
.+...+
T Consensus 252 ai~~n~ 257 (300)
T KOG1201|consen 252 AILTNQ 257 (300)
T ss_pred HHHcCC
Confidence 887654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.9e-10 Score=91.16 Aligned_cols=148 Identities=9% Similarity=0.031 Sum_probs=95.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||++.||+++++.|+++|++|.++.|+ .++.+. .+.+. ..++..+++|+.|++++.++++
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQD-----QSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 333321 12221 2356778899999988877653
Q ss_pred ---cCCEEEEcCCCCccc----c-----------chhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR----S-----------HQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~----~-----------~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... + .|...... ++....+.+.-..+|. |+..... +.
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--------~~ 151 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ--------DL 151 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC--------Cc
Confidence 589999999742211 0 12222222 3333333321134554 5432211 12
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEeccccccc
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGY 163 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~ 163 (312)
..|..+|..++.+.+. .++++..+.||.+..+
T Consensus 152 ~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 152 TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 3455599998777653 4688888899976654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-10 Score=89.52 Aligned_cols=134 Identities=19% Similarity=0.272 Sum_probs=93.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+++||||+|.||+.++++|+++| +.|+++.|+.. .++.+ ....+. ..++.++++|++++++++++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~---~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSED---SEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCH---HHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence 589999999999999999999996 67888888711 12222 223333 3567899999999988888775
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhh-
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD- 136 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~- 136 (312)
.+|++||+++...... .|+.....+.+++...+ -.++|+ |+.....+ .|..+.|.
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~------~~~~~~Y~a 150 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRG------SPGMSAYSA 150 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSS------STTBHHHHH
T ss_pred cccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccC------CCCChhHHH
Confidence 5799999999876321 45666677777777644 456654 54332221 12344555
Q ss_pred hHHHHHHHHHH
Q 021470 137 DKMVVRKAIED 147 (312)
Q Consensus 137 ~K~~~e~~~~~ 147 (312)
+|..++.+.+.
T Consensus 151 skaal~~~~~~ 161 (167)
T PF00106_consen 151 SKAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.4e-10 Score=94.69 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=62.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||++.||.++++.|+++| ++|++++|+ .++.+ ..+.+. ...+.++.+|++|.+++.++++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 77 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRD-----FLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE 77 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999999 999999998 33332 112232 2356788999999988877653
Q ss_pred ---cCCEEEEcCCCC
Q 021470 75 ---LVDVVICAISGV 86 (312)
Q Consensus 75 ---~~d~v~~~~~~~ 86 (312)
++|++||++|..
T Consensus 78 ~~~~iD~lI~nAG~~ 92 (314)
T TIGR01289 78 SGRPLDALVCNAAVY 92 (314)
T ss_pred hCCCCCEEEECCCcc
Confidence 589999999863
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.8e-10 Score=98.56 Aligned_cols=102 Identities=24% Similarity=0.274 Sum_probs=85.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
||+|+|+|+ |+||+.++..|+++| .+|++.+|+ +++..........+++..+.|..|.+++.+++++.|+||+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs-----~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn 74 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRS-----KEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN 74 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence 579999996 999999999999999 999999999 7777655555455899999999999999999999999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
++++.. ..++++||.+.| +..+-.|.+..
T Consensus 75 ~~p~~~--------~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 75 AAPPFV--------DLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred eCCchh--------hHHHHHHHHHhC-CCEEEcccCCc
Confidence 998764 348999999999 54444454443
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.1e-11 Score=90.71 Aligned_cols=227 Identities=14% Similarity=0.090 Sum_probs=133.2
Q ss_pred cEEEEEcCCchhhHHHHH-----HHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVK-----ASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.+.++-+++|+|+..|.. ++-..+ |.|++++|++... ...+.++..+++.+
T Consensus 13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~----ritw~el~~~Gip~---------------- 72 (315)
T KOG3019|consen 13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA----RITWPELDFPGIPI---------------- 72 (315)
T ss_pred ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc----ccccchhcCCCCce----------------
Confidence 345677889999988876 443333 8999999995432 11122232333321
Q ss_pred cCCEEEEcCCC----Cccc----------cchhHhHHHHHHHHHHhCCCc-eeec-C---CCCCCcccccccCCC--CCc
Q 021470 75 LVDVVICAISG----VHIR----------SHQILLQLKLVDAIKEAGNVK-RFLP-S---EFGTDPAKMANAMEP--GRV 133 (312)
Q Consensus 75 ~~d~v~~~~~~----~~~~----------~~~~~~~~~l~~aa~~~~~v~-~~v~-S---~~g~~~~~~~~~~~p--~~~ 133 (312)
.|+..++.++. .-.+ ...+..++.+++++..+.... .+|. | .|-.......+...+ ...
T Consensus 73 sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd 152 (315)
T KOG3019|consen 73 SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD 152 (315)
T ss_pred ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence 22333333322 1111 133556889999999876443 2332 2 222211111111111 122
Q ss_pred hhh---hHHHHHHHHHHhCCCeEEEecccccccccccCCCCC--ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 134 TFD---DKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 134 ~~~---~K~~~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+.. .+|+..........+.+++|.|.+.|..-..+..+. +..-.+++ .++|++.++|||++|++..+..+++
T Consensus 153 ~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL~~li~~ale 229 (315)
T KOG3019|consen 153 ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGP---LGSGQQWFPWIHVDDLVNLIYEALE 229 (315)
T ss_pred HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCc---CCCCCeeeeeeehHHHHHHHHHHHh
Confidence 222 233333333334578899999999875433221111 11112332 6789999999999999999999999
Q ss_pred CCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHH
Q 021470 209 DPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLAS 256 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~ 256 (312)
++. ..+++|-+.|+ ..+..|+++.+.++++++. +.++|.--..+.
T Consensus 230 ~~~-v~GViNgvAP~-~~~n~Ef~q~lg~aL~Rp~-~~pvP~fvvqA~ 274 (315)
T KOG3019|consen 230 NPS-VKGVINGVAPN-PVRNGEFCQQLGSALSRPS-WLPVPDFVVQAL 274 (315)
T ss_pred cCC-CCceecccCCC-ccchHHHHHHHHHHhCCCc-ccCCcHHHHHHH
Confidence 986 44577877776 9999999999999999985 667776544333
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.4e-10 Score=86.42 Aligned_cols=144 Identities=18% Similarity=0.210 Sum_probs=92.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc-------
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
+++||||+|.+|..+++.|.+++ .+|+++.|+.... ++.....+.+.. ..+.++++|++|++++.+++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~-~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS-AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS-TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc-HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 68999999999999999999998 5899999983222 333344455554 457788999999999999885
Q ss_pred cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHhCCCceeec-CC----CCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKEAGNVKRFLP-SE----FGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~~~v~~~v~-S~----~g~~~~~~~~~~~p~~~~~ 135 (312)
.++.|||+++...+.. ..+.+..+|.++..... ++.+|. || +|.... ..|.
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~gq---------~~Ya 150 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPGQ---------SAYA 150 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TTB---------HHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcch---------HhHH
Confidence 3588999999765321 33566788888887766 888775 54 343211 2333
Q ss_pred hhHHHHHHHHH---HhCCCeEEEeccc
Q 021470 136 DDKMVVRKAIE---DAGIPFTYVSANC 159 (312)
Q Consensus 136 ~~K~~~e~~~~---~~~~~~~i~r~~~ 159 (312)
.+...++.+.+ +.+.+++.+.-+.
T Consensus 151 aAN~~lda~a~~~~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 151 AANAFLDALARQRRSRGLPAVSINWGA 177 (181)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence 35555555544 3578887776443
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2e-09 Score=88.01 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=109.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.+-|+|||.-...|..++++|.++|+.|.+-+..+ +.++.+.... +++...++.|++++++++++.+
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~-----~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTE-----EGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecC-----chHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 35699999999999999999999999999999663 3333333333 7789999999999999999875
Q ss_pred --cCCEEEEcCCCCccc---------------cchhHh----HHHHHHHHHHhCCCceeec--CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIR---------------SHQILL----QLKLVDAIKEAGNVKRFLP--SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~---------------~~~~~~----~~~l~~aa~~~~~v~~~v~--S~~g~~~~~~~~~~~p~ 131 (312)
+...+||+||..... ++|.-+ ++.++-..+++. .|+|. |..|.... +..
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~------p~~ 175 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVAL------PAL 175 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccC------ccc
Confidence 568999999954321 144333 666777777766 57765 44453222 113
Q ss_pred CchhhhHHHHHHHHH-------HhCCCeEEEecccccccccc
Q 021470 132 RVTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGYFLG 166 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~~~~ 166 (312)
-+|-.+|..+|.+.. ..|+++.++-||.|-.+..+
T Consensus 176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred ccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 455559999887653 36999999999977665443
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-09 Score=84.24 Aligned_cols=82 Identities=23% Similarity=0.193 Sum_probs=63.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEE-EEECCCCCCChHHH-HHhhh--hccCCCeEEEccCCCHHHHHHHhc-
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETY-VLHRPEIGVDIEKV-QMLLS--FKEQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~-~~~r~~~~~~~~~~-~~~~~--l~~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
|++++|+||||+..||..|+++|++. |-+++ +..|+ ++++ ..++. ..++++++++.|+++.+++.++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~-----~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~ 75 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARD-----PEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQE 75 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC-----hHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHH
Confidence 88899999999999999999999976 44444 44555 5553 22222 247899999999999888887754
Q ss_pred --------cCCEEEEcCCCCc
Q 021470 75 --------LVDVVICAISGVH 87 (312)
Q Consensus 75 --------~~d~v~~~~~~~~ 87 (312)
|.|.+++++|...
T Consensus 76 V~~iVg~~GlnlLinNaGi~~ 96 (249)
T KOG1611|consen 76 VEKIVGSDGLNLLINNAGIAL 96 (249)
T ss_pred HHhhcccCCceEEEeccceee
Confidence 6789999998754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-09 Score=81.75 Aligned_cols=79 Identities=22% Similarity=0.211 Sum_probs=66.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
..+||||||+..||..+++.+++.|-+|++..|+ .++.+..+.. .+++..+.+|+.|.++++++++ .
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~-----e~~L~e~~~~-~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~ 78 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGNTVIICGRN-----EERLAEAKAE-NPEIHTEVCDVADRDSRRELVEWLKKEYPN 78 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCc-----HHHHHHHHhc-CcchheeeecccchhhHHHHHHHHHhhCCc
Confidence 4689999999999999999999999999999999 6666443333 5678889999999887777654 5
Q ss_pred CCEEEEcCCCCc
Q 021470 76 VDVVICAISGVH 87 (312)
Q Consensus 76 ~d~v~~~~~~~~ 87 (312)
.++++++||...
T Consensus 79 lNvliNNAGIqr 90 (245)
T COG3967 79 LNVLINNAGIQR 90 (245)
T ss_pred hheeeecccccc
Confidence 799999999765
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.4e-10 Score=85.80 Aligned_cols=96 Identities=21% Similarity=0.218 Sum_probs=74.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-hc-cCCCeEEEccCCCHHHHHHHhc-------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-FK-EQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~-~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
|+++||||||++|. +++.|.+.|++|++++|+ +++...+.. +. ...+.++.+|+.|++++.++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~-----~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARR-----EVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 47999999998876 999999999999999998 544432221 21 2467888999999999988876
Q ss_pred cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCc----eeec
Q 021470 75 LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVK----RFLP 114 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~----~~v~ 114 (312)
++|.+|+.+- +....++..+|++.| ++ ++++
T Consensus 75 ~id~lv~~vh--------~~~~~~~~~~~~~~g-v~~~~~~~~h 109 (177)
T PRK08309 75 PFDLAVAWIH--------SSAKDALSVVCRELD-GSSETYRLFH 109 (177)
T ss_pred CCeEEEEecc--------ccchhhHHHHHHHHc-cCCCCceEEE
Confidence 3566665543 556789999999999 88 7775
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.8e-09 Score=87.91 Aligned_cols=164 Identities=15% Similarity=0.073 Sum_probs=105.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++|||||+.||..+++.|..+|.+|+..+|+.......+....+......+.++++|++|.+++++..+ .
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ 114 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGP 114 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999932111111112222334567789999999988888754 5
Q ss_pred CCEEEEcCCCCcccc------------chhHh----HHHHHHHHHHhCCCceeec-CCCCC----CcccccccC---CCC
Q 021470 76 VDVVICAISGVHIRS------------HQILL----QLKLVDAIKEAGNVKRFLP-SEFGT----DPAKMANAM---EPG 131 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~------------~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~----~~~~~~~~~---~p~ 131 (312)
.|++|++||...... +|..+ +..|++.++.+. ..|+|. ||... .....+.+. ...
T Consensus 115 ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~ 193 (314)
T KOG1208|consen 115 LDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSGEKAKLYSS 193 (314)
T ss_pred ccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccchhccCccc
Confidence 799999999765321 44433 566777777766 367765 55332 111111111 111
Q ss_pred Cc-hhhhHHHHHHH----HHHh--CCCeEEEeccccccccccc
Q 021470 132 RV-TFDDKMVVRKA----IEDA--GIPFTYVSANCFAGYFLGG 167 (312)
Q Consensus 132 ~~-~~~~K~~~e~~----~~~~--~~~~~i~r~~~~~~~~~~~ 167 (312)
.. |..+|...... .++. |+....+-||.+..+.+..
T Consensus 194 ~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 194 DAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred hhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence 12 44488775333 3322 6777788899888774443
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.4e-09 Score=78.46 Aligned_cols=198 Identities=10% Similarity=0.038 Sum_probs=121.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhc-------c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+..+||||+..||++++..|.+.|.+|.+.+++.... .+.+ ..|.. .+...+.+|+++.+++...++ .
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-~ata---~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-EATA---GDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-HHHH---hhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 6788999999999999999999999999999885432 2222 34433 356678999999887777554 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CC-Cceeec--CCCCCCcccccccCCCCCch
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GN-VKRFLP--SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~-v~~~v~--S~~g~~~~~~~~~~~p~~~~ 134 (312)
++++++|++...+. ..|+.+.....+++.+. ++ --.+|. |..|..... ....|
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~------GQtnY 164 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF------GQTNY 164 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc------cchhh
Confidence 89999999987642 15666666666666554 20 114553 444432111 00122
Q ss_pred hh--------hHHHHHHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 135 FD--------DKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 135 ~~--------~K~~~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
.. +|.++++ +...++++..+.||++..+....+.... ....-+.++ ...+-..+|+|..++.+
T Consensus 165 AAsK~GvIgftktaArE-la~knIrvN~VlPGFI~tpMT~~mp~~v-~~ki~~~iP-------mgr~G~~EevA~~V~fL 235 (256)
T KOG1200|consen 165 AASKGGVIGFTKTAARE-LARKNIRVNVVLPGFIATPMTEAMPPKV-LDKILGMIP-------MGRLGEAEEVANLVLFL 235 (256)
T ss_pred hhhcCceeeeeHHHHHH-HhhcCceEeEeccccccChhhhhcCHHH-HHHHHccCC-------ccccCCHHHHHHHHHHH
Confidence 22 4444444 4456899999999998766544332211 000001111 11334678999998888
Q ss_pred hcCCcc--CCceEEec
Q 021470 207 INDPRT--LNRTMYLR 220 (312)
Q Consensus 207 l~~~~~--~~~~~~~~ 220 (312)
...... .|..+.++
T Consensus 236 AS~~ssYiTG~t~evt 251 (256)
T KOG1200|consen 236 ASDASSYITGTTLEVT 251 (256)
T ss_pred hccccccccceeEEEe
Confidence 755422 24455554
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-08 Score=84.75 Aligned_cols=151 Identities=16% Similarity=0.140 Sum_probs=98.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc----CCCeEEEccCCC-HHHHHHHhc--
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE----QGAKLVSGSFND-YQSLVNAVK-- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~----~~~~~v~~D~~d-~~~l~~~~~-- 74 (312)
++++++||||++.||+.+++.|++.|++|+++.|+.... +.+....... ..+.....|+++ .+++..+++
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE---AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh---hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999999888874321 1211122222 357778899998 877776654
Q ss_pred -----cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCC-CC
Q 021470 75 -----LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEP-GR 132 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p-~~ 132 (312)
++|+++|+++.... . ..|+.+...+.+++...-.-+++|. |+.... .. .+ ..
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-----~~~~~ 154 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-----PPGQA 154 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----CCCcc
Confidence 48999999997532 1 1555555555554433220116654 554432 21 11 14
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccc
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFA 161 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~ 161 (312)
.|..+|..+..+.+. .|+.+..+.||.+.
T Consensus 155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 566699987665542 57788888999444
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.1e-09 Score=86.87 Aligned_cols=96 Identities=23% Similarity=0.210 Sum_probs=78.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+|+|+||||. |+.+++.|.+.|++|++.+++.... +.+...+...+..+..|.+++.+.++ ++|+|++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~--------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VID 71 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK--------HLYPIHQALTVHTGALDPQELREFLKRHSIDILVD 71 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc--------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEEE
Confidence 58999999999 9999999999999999999985432 22333444556666778888988887 6999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
++.+.. ...+.|+.++|++.| ++.+=+
T Consensus 72 AtHPfA-----~~is~~a~~a~~~~~-ipylR~ 98 (256)
T TIGR00715 72 ATHPFA-----AQITTNATAVCKELG-IPYVRF 98 (256)
T ss_pred cCCHHH-----HHHHHHHHHHHHHhC-CcEEEE
Confidence 998876 778999999999999 877655
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.1e-08 Score=79.71 Aligned_cols=207 Identities=12% Similarity=0.098 Sum_probs=122.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc-----cCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK-----EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~-----~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.+.++||||+..||++++.+|.+.|.+|++..|+. ++.+. ...+. ...+..+.+|+.+.++..++++
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSE-----ERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999984 33211 11111 2457889999998866655543
Q ss_pred ------cCCEEEEcCCCCccc---------------cchhH-hHHHHHHHHHHh----CCCceeec-CCCCCCccccccc
Q 021470 75 ------LVDVVICAISGVHIR---------------SHQIL-LQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~---------------~~~~~-~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~ 127 (312)
+.|+++++++..... +.|+. ....+..++... + -..+++ |+.+.....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~---- 157 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPG---- 157 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCC----
Confidence 589999999976532 15666 344444444432 2 234555 433322111
Q ss_pred CCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
..+...|..+|..++.+.+. .++++..+-||.+...+.......... ...............-.+...+|++
T Consensus 158 ~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~gr~g~~~eva 236 (270)
T KOG0725|consen 158 PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEM-EEFKEATDSKGAVPLGRVGTPEEVA 236 (270)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchh-hHHhhhhccccccccCCccCHHHHH
Confidence 01112344499999888764 578888899988776651100000000 0000000000011122456789999
Q ss_pred HHHHHHhcCCc--cCCceEEec
Q 021470 201 MYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~ 220 (312)
..+..++.... ..|+.+.+.
T Consensus 237 ~~~~fla~~~asyitG~~i~vd 258 (270)
T KOG0725|consen 237 EAAAFLASDDASYITGQTIIVD 258 (270)
T ss_pred HhHHhhcCcccccccCCEEEEe
Confidence 99888877642 224444443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.5e-08 Score=85.09 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=59.1
Q ss_pred EEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 7 LIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 7 lI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+||||++.||.+++++|+++| ++|++.+|+ .++.. ....+. ...+.++++|+.|.+++.++++ +
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRD-----FLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 599999999999999999999 999999997 43332 222232 2357788999999988877764 5
Q ss_pred CCEEEEcCCCC
Q 021470 76 VDVVICAISGV 86 (312)
Q Consensus 76 ~d~v~~~~~~~ 86 (312)
+|++||+++..
T Consensus 76 iD~lInnAG~~ 86 (308)
T PLN00015 76 LDVLVCNAAVY 86 (308)
T ss_pred CCEEEECCCcC
Confidence 79999999864
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-08 Score=79.75 Aligned_cols=205 Identities=15% Similarity=0.119 Sum_probs=124.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.+++++||+.|.||..+.++|+++|..+.++..+.... ...++.....+...+-++++|+.+..+++++|+ .
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 57899999999999999999999998777776553221 222222233345678899999999988888876 4
Q ss_pred CCEEEEcCCCCcccc------ch----hHhHHHHHHHHHHhC-CCc-eeec--CCCCCCcccccccCCCCCchhh-hHHH
Q 021470 76 VDVVICAISGVHIRS------HQ----ILLQLKLVDAIKEAG-NVK-RFLP--SEFGTDPAKMANAMEPGRVTFD-DKMV 140 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~------~~----~~~~~~l~~aa~~~~-~v~-~~v~--S~~g~~~~~~~~~~~p~~~~~~-~K~~ 140 (312)
+|++||.++...+.+ .| +..+...+.+..+.. .-. -+|- |.+|.++-. ..+.|. +|..
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p-------~~pVY~AsKaG 156 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP-------VFPVYAASKAG 156 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc-------cchhhhhcccc
Confidence 799999999887543 33 333555666655432 122 2332 667754332 234444 6654
Q ss_pred H---------HHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 141 V---------RKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 141 ~---------e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+ +.+++++|+.+..+.||+........+...... .+... .+.. .-...+--+..+++..++.+++.++
T Consensus 157 VvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~-~e~~~-~~~~-~l~~~~~q~~~~~a~~~v~aiE~~~ 233 (261)
T KOG4169|consen 157 VVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGY-LEYSD-SIKE-ALERAPKQSPACCAINIVNAIEYPK 233 (261)
T ss_pred eeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCc-ccccH-HHHH-HHHHcccCCHHHHHHHHHHHHhhcc
Confidence 2 566677899999999998764333222110000 00000 0000 0001123367788999999998864
Q ss_pred cCCceEEe
Q 021470 212 TLNRTMYL 219 (312)
Q Consensus 212 ~~~~~~~~ 219 (312)
.|.+|-+
T Consensus 234 -NGaiw~v 240 (261)
T KOG4169|consen 234 -NGAIWKV 240 (261)
T ss_pred -CCcEEEE
Confidence 3444444
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.93 E-value=7.1e-09 Score=85.27 Aligned_cols=194 Identities=15% Similarity=0.172 Sum_probs=116.1
Q ss_pred cCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhh-ccCCCeEEEccCCCHHHHHHHh--------ccCC
Q 021470 10 GGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSF-KEQGAKLVSGSFNDYQSLVNAV--------KLVD 77 (312)
Q Consensus 10 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l-~~~~~~~v~~D~~d~~~l~~~~--------~~~d 77 (312)
|++ +.||+++++.|+++|++|++..|+ .++. ..++.+ ...+.+++++|+.+++++.+++ .++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD 75 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRN-----EEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID 75 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESS-----HHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence 566 999999999999999999999999 5542 122222 2345778999999998888774 3579
Q ss_pred EEEEcCCCCcc----cc--------------chhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh-
Q 021470 78 VVICAISGVHI----RS--------------HQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD- 136 (312)
Q Consensus 78 ~v~~~~~~~~~----~~--------------~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~- 136 (312)
+++|+++.... .. .|+.....+++++...- .-..+|+ |+.+... + .|....|.
T Consensus 76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----~-~~~~~~y~~ 149 (241)
T PF13561_consen 76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----P-MPGYSAYSA 149 (241)
T ss_dssp EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----B-STTTHHHHH
T ss_pred EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----c-CccchhhHH
Confidence 99999876543 11 33444444444443210 0023443 4332211 1 12233444
Q ss_pred hHHHHHHHHH-------H-hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 137 DKMVVRKAIE-------D-AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 137 ~K~~~e~~~~-------~-~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+|..++.+.+ . .|+++..|.||.+........... ...............+...+|+|.++..++.
T Consensus 150 sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~------~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s 223 (241)
T PF13561_consen 150 SKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN------EEFLEELKKRIPLGRLGTPEEVANAVLFLAS 223 (241)
T ss_dssp HHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH------HHHHHHHHHHSTTSSHBEHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccc------cchhhhhhhhhccCCCcCHHHHHHHHHHHhC
Confidence 9999887765 2 578889999998876532211100 0000000000111234689999999999998
Q ss_pred CCc-c-CCceEEec
Q 021470 209 DPR-T-LNRTMYLR 220 (312)
Q Consensus 209 ~~~-~-~~~~~~~~ 220 (312)
+.. + .|+.+.+.
T Consensus 224 ~~a~~itG~~i~vD 237 (241)
T PF13561_consen 224 DAASYITGQVIPVD 237 (241)
T ss_dssp GGGTTGTSEEEEES
T ss_pred ccccCccCCeEEEC
Confidence 752 3 35555553
|
... |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=78.58 Aligned_cols=142 Identities=18% Similarity=0.206 Sum_probs=93.2
Q ss_pred CcEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++||||| +.|.||.++++.+.+.|+.|++.+|+. +.. ..|. ..++...+.|+++++.+.+..+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~-----e~M---~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRL-----EPM---AQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcccc-----chH---hhHHHhhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence 47899998 679999999999999999999999983 333 2222 5689999999999998888754
Q ss_pred --cCCEEEEcCCCCcc-c-------------cchhHhHHHHHHHHH----HhCCCceeec--CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-R-------------SHQILLQLKLVDAIK----EAGNVKRFLP--SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~-------------~~~~~~~~~l~~aa~----~~~~v~~~v~--S~~g~~~~~~~~~~~p~~ 132 (312)
..|.++++||..-. + ++|+-+..++.++.. +++ ..+|. |..+.... |..
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~vpf-------pf~ 149 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGVVPF-------PFG 149 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEEecc-------chh
Confidence 46999999986421 1 155555444444433 222 23443 43333222 234
Q ss_pred chhh-hHHHHHHHHHHh-------CCCeEEEeccccc
Q 021470 133 VTFD-DKMVVRKAIEDA-------GIPFTYVSANCFA 161 (312)
Q Consensus 133 ~~~~-~K~~~e~~~~~~-------~~~~~i~r~~~~~ 161 (312)
+.|. +|+++..+.+.. |++++.+-+|.+-
T Consensus 150 ~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 150 SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred hhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 4444 999998887653 4445545555443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=89.20 Aligned_cols=92 Identities=27% Similarity=0.357 Sum_probs=71.1
Q ss_pred EEEEcCCchhhHHHHHHHHhCC-C-eEEEEECCCCCCChHHHHHhhh-hccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 6 VLIIGGTGYLGKRLVKASLALG-H-ETYVLHRPEIGVDIEKVQMLLS-FKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~-l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|+|+|+ |++|+.+++.|++++ + +|++.+|+ .++++.+.. +...+++.++.|+.|.+++.++++++|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRN-----PEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESS-----HHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECC-----HHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence 799999 999999999999987 4 89999999 777654332 25678999999999999999999999999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+++.. ...++++|.++| + ++|
T Consensus 75 ~gp~~--------~~~v~~~~i~~g-~-~yv 95 (386)
T PF03435_consen 75 AGPFF--------GEPVARACIEAG-V-HYV 95 (386)
T ss_dssp SSGGG--------HHHHHHHHHHHT---EEE
T ss_pred Cccch--------hHHHHHHHHHhC-C-Cee
Confidence 98752 447778888877 3 444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.7e-07 Score=79.27 Aligned_cols=206 Identities=12% Similarity=0.046 Sum_probs=109.7
Q ss_pred CCcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-------HhhhhccC----CCeEEEccC--CCH
Q 021470 2 EKSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-------MLLSFKEQ----GAKLVSGSF--NDY 66 (312)
Q Consensus 2 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~l~~~----~~~~v~~D~--~d~ 66 (312)
+.++++|||| +..||.++++.|.+.|.+|++ .|........+.. ....+... ....+.+|+ .++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 86 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTP 86 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcc
Confidence 3688999999 799999999999999999988 5542211000000 00001111 145678888 322
Q ss_pred ------------------HHHHHHhc-------cCCEEEEcCCCCc-----cc-----------cchhHhHHHHHHHHHH
Q 021470 67 ------------------QSLVNAVK-------LVDVVICAISGVH-----IR-----------SHQILLQLKLVDAIKE 105 (312)
Q Consensus 67 ------------------~~l~~~~~-------~~d~v~~~~~~~~-----~~-----------~~~~~~~~~l~~aa~~ 105 (312)
+++.++++ ++|++||+++... .. +.|+.....+++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p 166 (303)
T PLN02730 87 EDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGP 166 (303)
T ss_pred ccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 25555543 5899999996321 00 1556665555555443
Q ss_pred hC-CCceeec-CCCCCCcccccccCCC-CC-chhhhHHHHHHHHHH--------hCCCeEEEecccccccccccCCCCCc
Q 021470 106 AG-NVKRFLP-SEFGTDPAKMANAMEP-GR-VTFDDKMVVRKAIED--------AGIPFTYVSANCFAGYFLGGLCQPGS 173 (312)
Q Consensus 106 ~~-~v~~~v~-S~~g~~~~~~~~~~~p-~~-~~~~~K~~~e~~~~~--------~~~~~~i~r~~~~~~~~~~~~~~~~~ 173 (312)
.= .--++|. |+...... .| .. .|..+|..++.+.+. .++++..|.||.+-..........
T Consensus 167 ~m~~~G~II~isS~a~~~~------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~-- 238 (303)
T PLN02730 167 IMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFI-- 238 (303)
T ss_pred HHhcCCEEEEEechhhcCC------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccccc--
Confidence 20 0024554 43221111 12 12 355599998877653 256677788887654432211000
Q ss_pred cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEec
Q 021470 174 ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
. ..............+...+|++.+++.++.... ..+..+.+.
T Consensus 239 ---~-~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vd 283 (303)
T PLN02730 239 ---D-DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVD 283 (303)
T ss_pred ---H-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence 0 000000000000134578999999999997542 234555553
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-07 Score=76.28 Aligned_cols=189 Identities=14% Similarity=0.141 Sum_probs=114.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhc----cCCCeEEEccCCCHHHHHHHhc----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFK----EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~----~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.+|+|||++..+|..++..+..+|++|+++.|+. .|...+. .+. ...+.+..+|+.|.+++..+++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~-----~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSG-----KKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccH-----HHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 4899999999999999999999999999999984 3332221 111 1236688899999988888775
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCc---eeec--CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVK---RFLP--SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~---~~v~--S~~g~~~~~~~~~~~p~ 131 (312)
.+|.+|+|||..-.. ++|..++.|++.++..+- ... +++. |..+...- ...
T Consensus 109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i------~Gy 182 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI------YGY 182 (331)
T ss_pred ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc------ccc
Confidence 369999999975421 267777888777766542 122 4443 33222111 111
Q ss_pred CchhhhHHHHHHH-------HHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKA-------IEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~-------~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.+|..+|.+..-+ +..+++.++..-|+.+-.+.+. +.- ..+...... .. ..-+.+..+++|.+++
T Consensus 183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE---~En-~tkP~~t~i-i~---g~ss~~~~e~~a~~~~ 254 (331)
T KOG1210|consen 183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFE---REN-KTKPEETKI-IE---GGSSVIKCEEMAKAIV 254 (331)
T ss_pred cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccc---ccc-ccCchheee-ec---CCCCCcCHHHHHHHHH
Confidence 2333355554332 2235777777766665533221 110 001111111 11 1225588999999998
Q ss_pred HHhcCCc
Q 021470 205 KAINDPR 211 (312)
Q Consensus 205 ~~l~~~~ 211 (312)
.=+.+.+
T Consensus 255 ~~~~rg~ 261 (331)
T KOG1210|consen 255 KGMKRGN 261 (331)
T ss_pred hHHhhcC
Confidence 8777653
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.2e-08 Score=74.64 Aligned_cols=80 Identities=14% Similarity=0.107 Sum_probs=61.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.+.++||||+|.||+.+++.|++.|++|.++.|+. +... ..+.+. ......+.+|+++.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~ 90 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQ-----ESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA 90 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999873 2221 112222 2346678999999988877542
Q ss_pred --cCCEEEEcCCCCc
Q 021470 75 --LVDVVICAISGVH 87 (312)
Q Consensus 75 --~~d~v~~~~~~~~ 87 (312)
++|++||+++...
T Consensus 91 ~G~iDilVnnAG~~~ 105 (169)
T PRK06720 91 FSRIDMLFQNAGLYK 105 (169)
T ss_pred cCCCCEEEECCCcCC
Confidence 6899999998654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=4.4e-08 Score=82.93 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=78.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+||+|+|++|.+|+.++..|..++ .+++.+++... +.+. ..+.+........+.+|+.++.++++++|+|+
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-----~g~a-~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVV 81 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-----PGVA-ADLSHIDTPAKVTGYADGELWEKALRGADLVL 81 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-----cccc-cchhhcCcCceEEEecCCCchHHHhCCCCEEE
Confidence 6799999999999999999998666 68999988311 1111 12222222344556666666677899999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+++|..... ..|+...+++++++++++ ++++|+
T Consensus 82 itaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~ivi 122 (321)
T PTZ00325 82 ICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVG 122 (321)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEE
Confidence 999986532 267889999999999999 888776
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.8e-08 Score=72.74 Aligned_cols=186 Identities=12% Similarity=0.145 Sum_probs=116.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.+.|++||+.-.||+.++.+|.+.|.+|+++.|+ ++....+-.....-++.+.+|+.+.+.+.+++. .+|.+
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~-----~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL 81 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARN-----EANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGL 81 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecC-----HHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence 4679999999999999999999999999999999 666655444444558999999999999999886 46999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCce-----eec-CCCCCCcccccccCCCCCchhhhHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVKR-----FLP-SEFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~~-----~v~-S~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
++.++..... .+|+....++.+...+.= +.| ++. |+-.. ..+......|-.+|.
T Consensus 82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~l-v~R~~~GaIVNvSSqas-----~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNL-VDRQIKGAIVNVSSQAS-----IRPLDNHTVYCATKA 155 (245)
T ss_pred hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhh-hhccCCceEEEecchhc-----ccccCCceEEeecHH
Confidence 9999864321 256666555555533321 222 332 43222 112222344555888
Q ss_pred HHHHHHHH-------hCCCeEEEecccccc-----cccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 140 VVRKAIED-------AGIPFTYVSANCFAG-----YFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 140 ~~e~~~~~-------~~~~~~i~r~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+...+.+. .++++..+.|..++. +|.++. +.++.. . .-..-.|.-++.+..++..++
T Consensus 156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~--------K~k~mL--~-riPl~rFaEV~eVVnA~lfLL 224 (245)
T KOG1207|consen 156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD--------KKKKML--D-RIPLKRFAEVDEVVNAVLFLL 224 (245)
T ss_pred HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCch--------hccchh--h-hCchhhhhHHHHHHhhheeee
Confidence 87666543 234555566666653 222211 111110 0 011124567888888888888
Q ss_pred cCC
Q 021470 208 NDP 210 (312)
Q Consensus 208 ~~~ 210 (312)
.+.
T Consensus 225 Sd~ 227 (245)
T KOG1207|consen 225 SDN 227 (245)
T ss_pred ecC
Confidence 764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-07 Score=77.99 Aligned_cols=172 Identities=14% Similarity=0.061 Sum_probs=105.7
Q ss_pred HHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCCEEEEcCCCCccc-----
Q 021470 19 LVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVDVVICAISGVHIR----- 89 (312)
Q Consensus 19 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d~v~~~~~~~~~~----- 89 (312)
++++|+++|++|++++|+.. +.. ..+++++|++|.+++.++++ ++|++||+++.....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~-----~~~--------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~ 67 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREP-----GMT--------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV 67 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcc-----hhh--------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence 46889999999999999832 221 13467999999999998876 589999999865321
Q ss_pred -cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCc-cc-c--------------------cccCCCCCchhhhHHHHHH
Q 021470 90 -SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDP-AK-M--------------------ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 90 -~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~-~~-~--------------------~~~~~p~~~~~~~K~~~e~ 143 (312)
+.|+..+..+++++... + -.++|+ |+..... .. . ..+..+...|..+|..++.
T Consensus 68 ~~vN~~~~~~l~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~ 146 (241)
T PRK12428 68 ARVNFLGLRHLTEALLPRMAP-GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL 146 (241)
T ss_pred hhhchHHHHHHHHHHHHhccC-CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence 36788888888888754 2 246665 4322110 00 0 0122233455559998875
Q ss_pred HHH--------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 144 AIE--------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 144 ~~~--------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
+.+ ..|+++..++||.+...+....... ....... ........+...+|+|++++.++..+
T Consensus 147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~----~~~~~~~--~~~~~~~~~~~pe~va~~~~~l~s~~ 215 (241)
T PRK12428 147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM----LGQERVD--SDAKRMGRPATADEQAAVLVFLCSDA 215 (241)
T ss_pred HHHHHHHHhhhccCeEEEEeecCCccCcccccchhh----hhhHhhh--hcccccCCCCCHHHHHHHHHHHcChh
Confidence 543 2468888999998876543321110 0000000 00001113467899999999988654
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.7e-07 Score=74.29 Aligned_cols=80 Identities=23% Similarity=0.273 Sum_probs=64.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-hc-cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-FK-EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+||+|.+|+.+++.|.+.|++|+++.|+ +++.+.+.. +. ..+.++..+|..+.+++.++++++|+||
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi 102 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRD-----LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVF 102 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEE
Confidence 4789999999999999999999999999999998 656543322 22 2356677788899999999999999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
++.+...
T Consensus 103 ~at~~g~ 109 (194)
T cd01078 103 AAGAAGV 109 (194)
T ss_pred ECCCCCc
Confidence 9876543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-07 Score=95.24 Aligned_cols=153 Identities=15% Similarity=0.114 Sum_probs=102.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCC-----------------------------------------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGV----------------------------------------- 40 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------------------------------------- 40 (312)
.++++||||+|.||..+++.|.++ |.+|+++.|+....
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 368999999999999999999998 59999999972100
Q ss_pred --ChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------cCCEEEEcCCCCccc--------------cchhHhH
Q 021470 41 --DIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------LVDVVICAISGVHIR--------------SHQILLQ 96 (312)
Q Consensus 41 --~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------~~d~v~~~~~~~~~~--------------~~~~~~~ 96 (312)
..+....+..+. ...+.++.+|++|.+++.+++. ++|+|||++|..... +.|+.+.
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 000001112222 2357789999999998888775 489999999975421 2788889
Q ss_pred HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC-chhhhHHHHHHHHHH-----hCCCeEEEecccccc
Q 021470 97 LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR-VTFDDKMVVRKAIED-----AGIPFTYVSANCFAG 162 (312)
Q Consensus 97 ~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~-~~~~~K~~~e~~~~~-----~~~~~~i~r~~~~~~ 162 (312)
.++++++.... .+++|+ ||....... +.. .|..+|..+..+.+. .++++..+.+|.+-+
T Consensus 2157 ~~Ll~al~~~~-~~~IV~~SSvag~~G~------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2157 LSLLAALNAEN-IKLLALFSSAAGFYGN------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred HHHHHHHHHhC-CCeEEEEechhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 99999998776 677764 543322111 123 344488777655542 245667777877654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.3e-08 Score=77.72 Aligned_cols=83 Identities=22% Similarity=0.272 Sum_probs=58.7
Q ss_pred CCCcEEEEEcCC----------------chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC
Q 021470 1 MEKSKVLIIGGT----------------GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64 (312)
Q Consensus 1 M~~~~ilI~Gat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~ 64 (312)
|..++|+||+|. ||+|++++++|+++|++|+++++..+.. +... ........+.++..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~-~~~~-----~~~~~~~~V~s~~d 74 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEK-PNDI-----NNQLELHPFEGIID 74 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCC-Cccc-----CCceeEEEEecHHH
Confidence 556899999886 9999999999999999999998753321 1000 00122334556444
Q ss_pred CHHHHHHHhc--cCCEEEEcCCCCccc
Q 021470 65 DYQSLVNAVK--LVDVVICAISGVHIR 89 (312)
Q Consensus 65 d~~~l~~~~~--~~d~v~~~~~~~~~~ 89 (312)
..+.+.++++ ++|+|||+|+..++.
T Consensus 75 ~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 75 LQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHHHhcccCCCEEEECcccccee
Confidence 4467888885 689999999987643
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=80.12 Aligned_cols=154 Identities=16% Similarity=0.098 Sum_probs=96.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
..||+|+|++|.+|+.++..|...+ .+++.++++... .. ...+.+........++.+.+++.++++++|+|+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-----g~-a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVV 91 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-----GV-AADVSHINTPAQVRGFLGDDQLGDALKGADLVI 91 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-----ee-EchhhhCCcCceEEEEeCCCCHHHHcCCCCEEE
Confidence 4689999999999999999998776 589999887411 10 112222222323345545556788899999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-CCCCCC----ccc----ccccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTD----PAK----MANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~----~~~----~~~~~~p~~~~~~~K~~~e~ 143 (312)
++++..... ..|....+++++++++++ .+.+++ ++=..+ .-. ...+.+|...+.-++...++
T Consensus 92 itAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~R 170 (323)
T PLN00106 92 IPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVR 170 (323)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHH
Confidence 999976532 178888999999999999 777665 221111 000 02333343333334444333
Q ss_pred H----HHHhCCCeEEEeccccccc
Q 021470 144 A----IEDAGIPFTYVSANCFAGY 163 (312)
Q Consensus 144 ~----~~~~~~~~~i~r~~~~~~~ 163 (312)
+ .+..+++..-+..-.+++.
T Consensus 171 l~~~lA~~lgv~~~~V~~~ViGeH 194 (323)
T PLN00106 171 ANTFVAEKKGLDPADVDVPVVGGH 194 (323)
T ss_pred HHHHHHHHhCCChhheEEEEEEeC
Confidence 2 2346777666665555544
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-06 Score=73.86 Aligned_cols=206 Identities=13% Similarity=0.083 Sum_probs=104.2
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCC------CCCChHHHHHh--------------hhhc--cCCCeE
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPE------IGVDIEKVQML--------------LSFK--EQGAKL 58 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~~~~~~~--------------~~l~--~~~~~~ 58 (312)
.++++||||+ ..||+++++.|.++|.+|++.+|.+ .+....+.... ..+. -...+-
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~ 87 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED 87 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence 4789999995 8999999999999999999976431 00000000000 0000 011222
Q ss_pred EEccCCC--------HHHHHHHh-------ccCCEEEEcCCCCc--cc--------------cchhHhHHHHHHHHHHhC
Q 021470 59 VSGSFND--------YQSLVNAV-------KLVDVVICAISGVH--IR--------------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 59 v~~D~~d--------~~~l~~~~-------~~~d~v~~~~~~~~--~~--------------~~~~~~~~~l~~aa~~~~ 107 (312)
+..|+.+ .+++.+++ .++|++||+++... .. +.|+.+..++++++...=
T Consensus 88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m 167 (299)
T PRK06300 88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM 167 (299)
T ss_pred eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 2222222 12233333 25899999997432 11 155666666666655421
Q ss_pred -CCceeec-CCCCCCcccccccCCCCC--chhhhHHHHHHHHHH--------hCCCeEEEecccccccccccCCCCCccC
Q 021470 108 -NVKRFLP-SEFGTDPAKMANAMEPGR--VTFDDKMVVRKAIED--------AGIPFTYVSANCFAGYFLGGLCQPGSIL 175 (312)
Q Consensus 108 -~v~~~v~-S~~g~~~~~~~~~~~p~~--~~~~~K~~~e~~~~~--------~~~~~~i~r~~~~~~~~~~~~~~~~~~~ 175 (312)
.-.+++. ++...... .|.. .|..+|..++.+.+. .|+++..|.||.+...........
T Consensus 168 ~~~G~ii~iss~~~~~~------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~---- 237 (299)
T PRK06300 168 NPGGSTISLTYLASMRA------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFI---- 237 (299)
T ss_pred hcCCeEEEEeehhhcCc------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccccc----
Confidence 0123443 33222111 1122 355599998776642 267788888988754432111000
Q ss_pred CCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEec
Q 021470 176 PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
.. .............+...+|+++++..++.... ..+..+.+.
T Consensus 238 -~~-~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vd 282 (299)
T PRK06300 238 -ER-MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVD 282 (299)
T ss_pred -HH-HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence 00 00000000001134578999999999987642 235555554
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.60 E-value=3e-07 Score=74.47 Aligned_cols=69 Identities=25% Similarity=0.245 Sum_probs=49.8
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC--HHHHHHHhccCCEEEEcCCCCcc
Q 021470 11 GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND--YQSLVNAVKLVDVVICAISGVHI 88 (312)
Q Consensus 11 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d--~~~l~~~~~~~d~v~~~~~~~~~ 88 (312)
+||++|++++++|+++|++|++++|..... .....+++++.++..+ .+.+.+.+.++|+|||+|+....
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~---------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~ 94 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK---------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDY 94 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECccccc---------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCc
Confidence 489999999999999999999998863211 1112466776654322 24566667789999999998653
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.8e-07 Score=76.26 Aligned_cols=102 Identities=16% Similarity=0.061 Sum_probs=66.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-------CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-------HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
..+|+||||+|++|++++..|+..+ .+|++++++..... .+... ..+.+. ......|+....++.+.+++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~-~~g~~-~Dl~d~-~~~~~~~~~~~~~~~~~l~~ 78 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKA-LEGVV-MELQDC-AFPLLKSVVATTDPEEAFKD 78 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccc-cccee-eehhhc-cccccCCceecCCHHHHhCC
Confidence 3589999999999999999998854 58999999642110 00000 011100 00112244345667788899
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+|||+++..... ..|+...+.+...++++.
T Consensus 79 aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~ 118 (325)
T cd01336 79 VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYA 118 (325)
T ss_pred CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999986532 166777788888887773
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-06 Score=69.62 Aligned_cols=95 Identities=27% Similarity=0.383 Sum_probs=73.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
|+++|.| .|.+|+.+++.|.+.||+|+++.++ +++... .+. ......+.+|-+|++.|+++ ++.+|+++-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d-----~~~~~~--~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva 72 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRD-----EERVEE--FLADELDTHVVIGDATDEDVLEEAGIDDADAVVA 72 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcC-----HHHHHH--HhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence 5899999 8999999999999999999999998 655522 122 36789999999999999998 779999998
Q ss_pred cCCCCccccchhHhHHHHHHHH-HHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAI-KEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa-~~~~~v~~~v~ 114 (312)
+.+... .. .-++..+ +..| +++++.
T Consensus 73 ~t~~d~------~N-~i~~~la~~~~g-v~~via 98 (225)
T COG0569 73 ATGNDE------VN-SVLALLALKEFG-VPRVIA 98 (225)
T ss_pred eeCCCH------HH-HHHHHHHHHhcC-CCcEEE
Confidence 877642 11 2233333 3457 888875
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.8e-06 Score=70.91 Aligned_cols=77 Identities=14% Similarity=0.276 Sum_probs=59.5
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHH----HHHHHhcc--
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQ----SLVNAVKL-- 75 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~----~l~~~~~~-- 75 (312)
.+|||||..||++.+++|.++|.+|+.++|+ .+|.+.. +++. .-.+.++..|+++++ .+.+.+.+
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt-----~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGFNVVLISRT-----QEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 6799999999999999999999999999999 6666433 2221 234778889997654 46666665
Q ss_pred CCEEEEcCCCCc
Q 021470 76 VDVVICAISGVH 87 (312)
Q Consensus 76 ~d~v~~~~~~~~ 87 (312)
+-+++|++|...
T Consensus 127 VgILVNNvG~~~ 138 (312)
T KOG1014|consen 127 VGILVNNVGMSY 138 (312)
T ss_pred eEEEEecccccC
Confidence 557899999766
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.6e-07 Score=74.75 Aligned_cols=92 Identities=24% Similarity=0.302 Sum_probs=69.7
Q ss_pred EEEEEcCCchhhHHHHHHHHh----CCCeEEEEECCCCCCChHHHHH-hhhhcc------CCCeEEEccCCCHHHHHHHh
Q 021470 5 KVLIIGGTGYLGKRLVKASLA----LGHETYVLHRPEIGVDIEKVQM-LLSFKE------QGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~l~~~~ 73 (312)
.+.|.||+||.|..+++.++. .+...-+..|+ ++|.+. ++.... ....++.+|..|++++.+..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn-----~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRN-----EKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCC-----HHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence 488999999999999999998 56788888898 666642 222211 12338889999999999999
Q ss_pred ccCCEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 74 KLVDVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
+.+.+|+||+|+... ....++.||.++|
T Consensus 82 k~~~vivN~vGPyR~------hGE~VVkacienG 109 (423)
T KOG2733|consen 82 KQARVIVNCVGPYRF------HGEPVVKACIENG 109 (423)
T ss_pred hhhEEEEecccccee------cCcHHHHHHHHcC
Confidence 999999999998642 2335556666655
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.45 E-value=7.6e-06 Score=59.01 Aligned_cols=92 Identities=24% Similarity=0.343 Sum_probs=70.2
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEcCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICAIS 84 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~~~ 84 (312)
|+|.| .|.+|+.+++.|.+.+.+|+++.++ +++. +.+...++.++.+|.+|++.+.++ +++++.++.+..
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d-----~~~~---~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRD-----PERV---EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESS-----HHHH---HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECC-----cHHH---HHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 67888 7899999999999977799999998 6666 445567899999999999999986 568999988876
Q ss_pred CCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 85 GVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 85 ~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
. -.....++..+++.++..+++
T Consensus 72 ~-------d~~n~~~~~~~r~~~~~~~ii 93 (116)
T PF02254_consen 72 D-------DEENLLIALLARELNPDIRII 93 (116)
T ss_dssp S-------HHHHHHHHHHHHHHTTTSEEE
T ss_pred C-------HHHHHHHHHHHHHHCCCCeEE
Confidence 3 344556666777655234444
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.2e-06 Score=74.28 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=70.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHh-C--CCeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLA-L--GHETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|||+|+||+|.+|++++..|.. . ++++++++|+.. . +. ....+.+ .....+.+ .+.+++.+.++++|+|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~---~g-~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiV 73 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-T---PG-VAVDLSHIPTAVKIKG--FSGEDPTPALEGADVV 73 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-C---cc-eehhhhcCCCCceEEE--eCCCCHHHHcCCCCEE
Confidence 6899999999999999988854 3 368888888632 1 11 0012222 21223443 2233455667899999
Q ss_pred EEcCCCCcccc--------chhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRS--------HQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
|.++|...... .|....+++++++++++ .+++|.
T Consensus 74 IitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivi 115 (312)
T PRK05086 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIG 115 (312)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEE
Confidence 99999755321 57778999999999998 777664
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.9e-06 Score=72.47 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=55.4
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+ |++|+|+||||++|+.+++.|.+++| ++..++...+.. +.+...+ ...++.+.+.. + ++++
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG--------~~l~~~~---~~l~~~~~~~~-~-~~~v 67 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAG--------HSVPFAG---KNLRVREVDSF-D-FSQV 67 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCC--------CeeccCC---cceEEeeCChH-H-hcCC
Confidence 55 57999999999999999999998775 444443332111 1111122 12333332222 1 4789
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|+||.+++.. ....++..+.++| ++ +|
T Consensus 68 D~vFla~p~~--------~s~~~v~~~~~~G-~~-VI 94 (336)
T PRK05671 68 QLAFFAAGAA--------VSRSFAEKARAAG-CS-VI 94 (336)
T ss_pred CEEEEcCCHH--------HHHHHHHHHHHCC-Ce-EE
Confidence 9999988732 2345888888888 54 44
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.7e-06 Score=70.22 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=60.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
..++|.|||||.|.-++++|..+|.+-....|+ ..|...+...-...+.. .++.+++.+.+...+.++|+||+
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs-----~~kl~~l~~~LG~~~~~--~p~~~p~~~~~~~~~~~VVlncv 79 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRS-----SAKLDALRASLGPEAAV--FPLGVPAALEAMASRTQVVLNCV 79 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCC-----HHHHHHHHHhcCccccc--cCCCCHHHHHHHHhcceEEEecc
Confidence 468999999999999999999999888777888 66664333322334433 44556999999999999999999
Q ss_pred CCCc
Q 021470 84 SGVH 87 (312)
Q Consensus 84 ~~~~ 87 (312)
|+..
T Consensus 80 GPyt 83 (382)
T COG3268 80 GPYT 83 (382)
T ss_pred cccc
Confidence 9865
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=7.6e-06 Score=70.35 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=59.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|++|+|+||||++|+.+++.|.+++| +++.++|..+.. +.+.-.+.++...|+.+. .++++|+|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g--------~~l~~~g~~i~v~d~~~~-----~~~~vDvV 67 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG--------KELSFKGKELKVEDLTTF-----DFSGVDIA 67 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC--------CeeeeCCceeEEeeCCHH-----HHcCCCEE
Confidence 46999999999999999999999876 558887764322 112122345555566432 24689999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|.+++.. ....++..+.++| + .+|
T Consensus 68 f~A~g~g--------~s~~~~~~~~~~G-~-~VI 91 (334)
T PRK14874 68 LFSAGGS--------VSKKYAPKAAAAG-A-VVI 91 (334)
T ss_pred EECCChH--------HHHHHHHHHHhCC-C-EEE
Confidence 9998654 3455666666677 5 444
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.8e-06 Score=66.71 Aligned_cols=90 Identities=18% Similarity=0.081 Sum_probs=63.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-----CeEEEEECCCCCCChHHHHHhh-hhc--cCCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-----HETYVLHRPEIGVDIEKVQMLL-SFK--EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~-~l~--~~~~~~v~~D~~d~~~l~~~ 72 (312)
|+-+.++|||+++.+|.+|+..|++.. .++...+|+-+.. .+-...++ ... ..++++++.|+++..++.++
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka-e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A 79 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA-EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA 79 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH-HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence 555678899999999999999999865 3566668883322 11112222 222 34678999999998666655
Q ss_pred -------hccCCEEEEcCCCCccccc
Q 021470 73 -------VKLVDVVICAISGVHIRSH 91 (312)
Q Consensus 73 -------~~~~d~v~~~~~~~~~~~~ 91 (312)
++..|.||.+||.+.....
T Consensus 80 ~~di~~rf~~ld~iylNAg~~~~~gi 105 (341)
T KOG1478|consen 80 SKDIKQRFQRLDYIYLNAGIMPNPGI 105 (341)
T ss_pred HHHHHHHhhhccEEEEccccCCCCcc
Confidence 4478999999999875543
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.1e-06 Score=73.23 Aligned_cols=75 Identities=23% Similarity=0.304 Sum_probs=58.4
Q ss_pred CCCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC
Q 021470 1 MEKSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64 (312)
Q Consensus 1 M~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~ 64 (312)
|..++|+|||| +|.+|.+++++|.++|++|++++++.... . ..+ +...|++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~----------~-~~~--~~~~dv~ 252 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP----------T-PAG--VKRIDVE 252 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc----------C-CCC--cEEEccC
Confidence 34579999999 99999999999999999999998873210 0 122 3467898
Q ss_pred CHHHHHHHhc----cCCEEEEcCCCCcc
Q 021470 65 DYQSLVNAVK----LVDVVICAISGVHI 88 (312)
Q Consensus 65 d~~~l~~~~~----~~d~v~~~~~~~~~ 88 (312)
+.+++.+++. ++|++||+|+...+
T Consensus 253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 253 SAQEMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred CHHHHHHHHHHhcCCCCEEEEccccccc
Confidence 9877777664 68999999997653
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.6e-06 Score=70.91 Aligned_cols=71 Identities=30% Similarity=0.380 Sum_probs=52.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-C-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-G-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+||||+|++|+.++++|+++ | .+++++.|+ .++...+.. ++..+++ .++.+++.++|+||
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~-----~~rl~~La~------el~~~~i---~~l~~~l~~aDiVv 220 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQ-----QERLQELQA------ELGGGKI---LSLEEALPEADIVV 220 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCC-----HHHHHHHHH------HhccccH---HhHHHHHccCCEEE
Confidence 579999999999999999999865 5 689999887 444432211 1112333 34667888999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9998754
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.5e-06 Score=63.58 Aligned_cols=198 Identities=14% Similarity=0.148 Sum_probs=118.6
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LVD 77 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~d 77 (312)
..+|||+.+.+|+..++.|.++|..|..++-..+.. .+ ..+++ ..++.+...|+++++++..++. ..|
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg-~~---vakel-g~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-AD---VAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-hH---HHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 468999999999999999999999999998875543 22 22444 5678899999999999998876 479
Q ss_pred EEEEcCCCCccc--------------------cchhHhHHHHHHHHHHh-C------CCce-eec---CCCCCCcccccc
Q 021470 78 VVICAISGVHIR--------------------SHQILLQLKLVDAIKEA-G------NVKR-FLP---SEFGTDPAKMAN 126 (312)
Q Consensus 78 ~v~~~~~~~~~~--------------------~~~~~~~~~l~~aa~~~-~------~v~~-~v~---S~~g~~~~~~~~ 126 (312)
+.++|++....- ++|+.++.|+++..... | .-+| +|. |....+ ++
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd-gq--- 161 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD-GQ--- 161 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec-Cc---
Confidence 999999975421 14444555554433211 0 0111 222 221111 11
Q ss_pred cCCCCCchhhhHHHH-------HHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 127 AMEPGRVTFDDKMVV-------RKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~-------e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
.....|..+|..+ .+-+...|+++..+-||+|..+.+..+......... ..++.+ ..+-+..+.
T Consensus 162 --~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla-~~ipfp------srlg~p~ey 232 (260)
T KOG1199|consen 162 --TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLA-QLIPFP------SRLGHPHEY 232 (260)
T ss_pred --cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHH-HhCCCc------hhcCChHHH
Confidence 0112333366542 222333578888889999887766544332110000 011111 123356677
Q ss_pred HHHHHHHhcCCccCCceEEec
Q 021470 200 AMYTMKAINDPRTLNRTMYLR 220 (312)
Q Consensus 200 a~~~~~~l~~~~~~~~~~~~~ 220 (312)
+..+-.++++|-..+.++.+.
T Consensus 233 ahlvqaiienp~lngevir~d 253 (260)
T KOG1199|consen 233 AHLVQAIIENPYLNGEVIRFD 253 (260)
T ss_pred HHHHHHHHhCcccCCeEEEec
Confidence 888888899986556665553
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1e-05 Score=78.27 Aligned_cols=78 Identities=22% Similarity=0.231 Sum_probs=60.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-Ce-------------EEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HE-------------TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQS 68 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~ 68 (312)
|++|+|+| +|++|+..++.|.+.. .+ |.+.+++ +++++.+... .++++.++.|+.|.++
T Consensus 569 ~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~-----~~~a~~la~~-~~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 569 SQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLY-----LKDAKETVEG-IENAEAVQLDVSDSES 641 (1042)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCC-----HHHHHHHHHh-cCCCceEEeecCCHHH
Confidence 57999999 5999999999998754 33 7767776 5555332221 1378889999999999
Q ss_pred HHHHhccCCEEEEcCCCCc
Q 021470 69 LVNAVKLVDVVICAISGVH 87 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~ 87 (312)
+.++++++|+|+++++...
T Consensus 642 L~~~v~~~DaVIsalP~~~ 660 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPASC 660 (1042)
T ss_pred HHHhhcCCCEEEECCCchh
Confidence 9999999999999998743
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.7e-06 Score=72.52 Aligned_cols=92 Identities=17% Similarity=0.330 Sum_probs=59.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~ 80 (312)
+++|+|+||||++|+.+++.|.++ .++|+.++++.+.. +.+.........+|..+.+++... ++++|+||
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG--------~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf 109 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG--------QSFGSVFPHLITQDLPNLVAVKDADFSDVDAVF 109 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC--------CCchhhCccccCccccceecCCHHHhcCCCEEE
Confidence 479999999999999999999998 47999998863321 111111222233344333333322 57899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.+++.. ...+++.++ +.| .++|
T Consensus 110 ~Alp~~--------~s~~i~~~~-~~g--~~VI 131 (381)
T PLN02968 110 CCLPHG--------TTQEIIKAL-PKD--LKIV 131 (381)
T ss_pred EcCCHH--------HHHHHHHHH-hCC--CEEE
Confidence 988653 456677765 355 4555
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.2e-05 Score=68.45 Aligned_cols=88 Identities=20% Similarity=0.123 Sum_probs=63.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--C-----eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-----------
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--H-----ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY----------- 66 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~----------- 66 (312)
||+|+||+|.+|+.++..|...+ . +++.++++... ...+....|+.|.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence 79999999999999999998866 2 58888887310 1122223333332
Q ss_pred HHHHHHhccCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHh
Q 021470 67 QSLVNAVKLVDVVICAISGVHIRS--------HQILLQLKLVDAIKEA 106 (312)
Q Consensus 67 ~~l~~~~~~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~ 106 (312)
....+.++++|+|++++|...... .|....+.+....+++
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 344567889999999999865321 5777889999988887
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.6e-05 Score=71.80 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=62.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
|+|+|+|+ |.+|+++++.|.+.|++|++++++ +++.+.+.. ..+++++.+|.++.+.+.++ ++++|.|+.+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~-----~~~~~~~~~--~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTD-----EERLRRLQD--RLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHHh--hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 48999995 999999999999999999999998 666533221 25789999999999999998 7899999988
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
...
T Consensus 73 ~~~ 75 (453)
T PRK09496 73 TDS 75 (453)
T ss_pred cCC
Confidence 764
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.6e-05 Score=63.69 Aligned_cols=95 Identities=19% Similarity=0.248 Sum_probs=78.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
|++|+|+|||+- |+.+++.|.+.|++|++.+-..... ....+..+..+-+.|.+++.+.++ +++.|+
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI 70 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI 70 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC----------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE
Confidence 478999999886 9999999999999888876653321 124577888898889999999997 799999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
...-+.. ...++++.++|++.+ ++.+=+
T Consensus 71 DATHPfA-----~~is~~a~~ac~~~~-ipyiR~ 98 (248)
T PRK08057 71 DATHPYA-----AQISANAAAACRALG-IPYLRL 98 (248)
T ss_pred ECCCccH-----HHHHHHHHHHHHHhC-CcEEEE
Confidence 9988776 788999999999999 877655
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-05 Score=69.22 Aligned_cols=82 Identities=22% Similarity=0.223 Sum_probs=59.0
Q ss_pred CcEEEEEcCCchhhHH--HHHHHHhCCCeEEEEECCCCCCChHH---------HHHhhhhcc--CCCeEEEccCCCHHHH
Q 021470 3 KSKVLIIGGTGYLGKR--LVKASLALGHETYVLHRPEIGVDIEK---------VQMLLSFKE--QGAKLVSGSFNDYQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~l~~--~~~~~v~~D~~d~~~l 69 (312)
.+++||||+++.+|.+ ++++| +.|.+|.++++..... ..+ ....+.+.. ..+..+.+|+++++++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~-~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGT-EKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchh-hhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 3789999999999999 89999 9999998888542111 000 011112222 2356789999999888
Q ss_pred HHHhc-------cCCEEEEcCCCC
Q 021470 70 VNAVK-------LVDVVICAISGV 86 (312)
Q Consensus 70 ~~~~~-------~~d~v~~~~~~~ 86 (312)
.++++ ++|+++|+++..
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccC
Confidence 77764 589999999976
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.9e-05 Score=56.48 Aligned_cols=91 Identities=15% Similarity=0.136 Sum_probs=73.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
++|+++| .| .|.+++..|.+.|++|++++.+ +... +..+..+++.+.+|+.+++- +.-+++|.|+.+=
T Consensus 18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~-----~~aV---~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysir 85 (134)
T PRK04148 18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDIN-----EKAV---EKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIR 85 (134)
T ss_pred CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECC-----HHHH---HHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeC
Confidence 5799999 78 8999999999999999999998 5544 33345678999999988753 3456899999776
Q ss_pred CCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 84 SGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
++ .+.+..+++.|++.+ +.-+|.
T Consensus 86 pp-------~el~~~~~~la~~~~-~~~~i~ 108 (134)
T PRK04148 86 PP-------RDLQPFILELAKKIN-VPLIIK 108 (134)
T ss_pred CC-------HHHHHHHHHHHHHcC-CCEEEE
Confidence 55 567888999999999 777764
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.2e-05 Score=58.50 Aligned_cols=94 Identities=21% Similarity=0.255 Sum_probs=64.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhc----cCCCeEEEccCCCHHHHHHHhccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFK----EQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~----~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|||.|+||+|.+|++++..|...+ .+++.++++ ..+.+ ...++. .......... .+++ .++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~-----~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~----~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDIN-----EDKAEGEALDLSHASAPLPSPVRITS-GDYE----ALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHHHHHGSTEEEEEEE-SSGG----GGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccC-----cccceeeehhhhhhhhhccccccccc-cccc----ccccc
Confidence 589999999999999999999988 589999998 43332 111111 1112222111 3333 37799
Q ss_pred CEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 77 DVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 77 d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
|+|+.+++..... ..|....+.+.+.+.+.+
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~ 109 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYA 109 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhC
Confidence 9999999976432 267777888888888887
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.7e-05 Score=66.73 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=60.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHH-hhhhcc--CCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQM-LLSFKE--QGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~l~~--~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++++|+|| |.+|++++..|.+.|.+ |+++.|+... .++.+. .+.+.. ..+.+...|+.+.+++.+.++.+|+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~--~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDF--YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchH--HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 468999997 89999999999999975 9999998321 133322 222322 2345667889888888888889999
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
|||+.+..
T Consensus 203 lINaTp~G 210 (289)
T PRK12548 203 LVNATLVG 210 (289)
T ss_pred EEEeCCCC
Confidence 99998754
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.8e-05 Score=68.60 Aligned_cols=101 Identities=23% Similarity=0.245 Sum_probs=59.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhc----cCC-CeEEEccCCCHHHHHHHhc
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFK----EQG-AKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~----~~~-~~~v~~D~~d~~~l~~~~~ 74 (312)
|||++|+|+||||++|+.+++.|++.. .+++++.++.+... ........+. ..+ ..-+.....+++. ++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~ 75 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAG-KTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VD 75 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcC-CcccccccccccccccccccceEEEeCCHHH----hc
Confidence 778999999999999999999999876 48888855532210 0000000000 000 0001111224443 35
Q ss_pred cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 75 LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
++|+||.+.+.. ....+++++.+.| ++.|..|
T Consensus 76 ~~DvVf~a~p~~--------~s~~~~~~~~~~G-~~vIDls 107 (349)
T PRK08664 76 DVDIVFSALPSD--------VAGEVEEEFAKAG-KPVFSNA 107 (349)
T ss_pred CCCEEEEeCChh--------HHHHHHHHHHHCC-CEEEECC
Confidence 899998876543 2355667777788 7766664
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.9e-06 Score=70.16 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=57.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEE-EccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-SGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|++|+|+||||++|+.+++.|.+. +.++.++.++.+.. ++.. +.. .++..+ ..++.+.+.. .+.++|+||
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g--~~l~--~~~--~~~~~~~~~~~~~~~~~--~~~~vD~Vf 73 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAG--KPLS--DVH--PHLRGLVDLVLEPLDPE--ILAGADVVF 73 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccC--cchH--HhC--cccccccCceeecCCHH--HhcCCCEEE
Confidence 479999999999999999999987 47888877642211 0110 000 111111 1223333332 356899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.|.+.. ....++.++.++| +++|
T Consensus 74 ~alP~~--------~~~~~v~~a~~aG--~~VI 96 (343)
T PRK00436 74 LALPHG--------VSMDLAPQLLEAG--VKVI 96 (343)
T ss_pred ECCCcH--------HHHHHHHHHHhCC--CEEE
Confidence 988653 3567777777777 5666
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.8e-05 Score=55.78 Aligned_cols=92 Identities=23% Similarity=0.326 Sum_probs=53.7
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG-HETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|+||||++|+.+++.|.++. .++..+ .|+.+... +...... ...+..-...+-.+.+. +.++|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~--~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGK--PLSEVFP-HPKGFEDLSVEDADPEE----LSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTS--BHHHTTG-GGTTTEEEBEEETSGHH----HTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCC--eeehhcc-ccccccceeEeecchhH----hhcCCEEEec
Confidence 69999999999999999999965 465555 44431111 1111010 01122222211134333 4789999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.+.. ....++..+.+.| + ++|
T Consensus 74 ~~~~--------~~~~~~~~~~~~g-~-~Vi 94 (121)
T PF01118_consen 74 LPHG--------ASKELAPKLLKAG-I-KVI 94 (121)
T ss_dssp SCHH--------HHHHHHHHHHHTT-S-EEE
T ss_pred Cchh--------HHHHHHHHHhhCC-c-EEE
Confidence 7643 4567777778888 5 454
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.0002 Score=62.56 Aligned_cols=168 Identities=15% Similarity=0.253 Sum_probs=96.2
Q ss_pred CCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC
Q 021470 2 EKSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65 (312)
Q Consensus 2 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d 65 (312)
..++|+|||| ||.+|..+++.|..+|.+|+.+.+..... ...++ ...|+.+
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~~--~~~~v~~ 250 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPGV--KSIKVST 250 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCCc--EEEEecc
Confidence 3578999998 47899999999999999999998763211 12223 4578888
Q ss_pred HHHH-HHHh----ccCCEEEEcCCCCcccc----------------chhHhHHHHHHHHHHhCCCceeecCCCCCCcccc
Q 021470 66 YQSL-VNAV----KLVDVVICAISGVHIRS----------------HQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKM 124 (312)
Q Consensus 66 ~~~l-~~~~----~~~d~v~~~~~~~~~~~----------------~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~ 124 (312)
.+++ .+++ .++|++|++|+...+.. .+...+..++...++.. -+.++.. |....+
T Consensus 251 ~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~-~~~~lvg-F~aEt~-- 326 (390)
T TIGR00521 251 AEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK-KHQVIVG-FKAETN-- 326 (390)
T ss_pred HHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC-CCcEEEE-EEcCCC--
Confidence 8777 4444 36899999999865421 23344566666666543 2222211 111000
Q ss_pred cccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEe-CCCCcceeeeeHHHHHHHH
Q 021470 125 ANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLL-GDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 125 ~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~D~a~~~ 203 (312)
.. ....+++-+++.+.++++.-.- +.- . ++ .......++ .++....+..+-.++|+.+
T Consensus 327 -------~~---l~~~A~~kl~~k~~D~ivaN~i---~~~--~---fg---~~~n~~~li~~~~~~~~~~~~K~~iA~~i 385 (390)
T TIGR00521 327 -------DD---LIKYAKEKLKKKNLDMIVANDV---SQR--G---FG---SDENEVYIFSKHGHKELPLMSKLEVAERI 385 (390)
T ss_pred -------cH---HHHHHHHHHHHcCCCEEEEccC---Ccc--c---cC---CCCcEEEEEECCCeEEeCCCCHHHHHHHH
Confidence 11 2333555566778888775321 000 0 10 112223322 2333334455667888887
Q ss_pred HHHh
Q 021470 204 MKAI 207 (312)
Q Consensus 204 ~~~l 207 (312)
+..+
T Consensus 386 ~~~~ 389 (390)
T TIGR00521 386 LDEI 389 (390)
T ss_pred HHHh
Confidence 7654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00015 Score=57.09 Aligned_cols=82 Identities=16% Similarity=0.142 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cC-CCeEEEccCCCHHHHHHHhc--
Q 021470 1 MEKSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQ-GAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 1 M~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~-~~~~v~~D~~d~~~l~~~~~-- 74 (312)
|..|++||+|-. -.|+..|++.|.++|.++......+. -....+.+. .. ..-++++|+++.+++.++|.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~-----l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER-----LEKRVEELAEELGSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHH-----HHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence 456899999944 46999999999999999888877631 111112222 22 24578999999998888875
Q ss_pred -----cCCEEEEcCCCCc
Q 021470 75 -----LVDVVICAISGVH 87 (312)
Q Consensus 75 -----~~d~v~~~~~~~~ 87 (312)
+.|.++|+.++..
T Consensus 79 ~~~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAP 96 (259)
T ss_pred HHhhCcccEEEEEeccCC
Confidence 5899999999876
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.6e-05 Score=68.72 Aligned_cols=88 Identities=24% Similarity=0.240 Sum_probs=63.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|+++ +|..+++.|++.|++|++.+++.... -.+..+.+...++.++.+|..+ +...++|+||++
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~---~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~ 75 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ---LKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVS 75 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEEC
Confidence 57999999766 99999999999999999998863211 1112244555578888888766 235679999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
++.... ...+.+|++.|
T Consensus 76 ~g~~~~--------~~~~~~a~~~~ 92 (450)
T PRK14106 76 PGVPLD--------SPPVVQAHKKG 92 (450)
T ss_pred CCCCCC--------CHHHHHHHHCC
Confidence 886432 13556666655
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.2e-05 Score=54.84 Aligned_cols=94 Identities=21% Similarity=0.202 Sum_probs=56.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHh-CCCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLA-LGHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|+|+|.|++|.+|+.+++.+.+ .++++.+. +|+.+...-.....+......++.+ .+++.+++..+|++|.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence 5899999999999999999998 56786665 5553211000000000000111211 2567777878999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.. .......++.|.++| ++.++
T Consensus 74 fT~--------p~~~~~~~~~~~~~g-~~~Vi 96 (124)
T PF01113_consen 74 FTN--------PDAVYDNLEYALKHG-VPLVI 96 (124)
T ss_dssp ES---------HHHHHHHHHHHHHHT--EEEE
T ss_pred cCC--------hHHhHHHHHHHHhCC-CCEEE
Confidence 873 456778888888988 54444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00016 Score=65.32 Aligned_cols=97 Identities=21% Similarity=0.235 Sum_probs=70.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
+++|+|+| .|.+|+.+++.|.+.|++|+++.++ +++.+.+... ..++.++.+|..+++.+.++ ++++|.|+.
T Consensus 231 ~~~iiIiG-~G~~g~~l~~~L~~~~~~v~vid~~-----~~~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 231 VKRVMIVG-GGNIGYYLAKLLEKEGYSVKLIERD-----PERAEELAEE-LPNTLVLHGDGTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHH-CCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence 57899999 5999999999999999999999998 6655332221 24688999999999999765 568999987
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+... .|. .+...|++.+ +++++.
T Consensus 304 ~~~~~~---~n~----~~~~~~~~~~-~~~ii~ 328 (453)
T PRK09496 304 LTNDDE---ANI----LSSLLAKRLG-AKKVIA 328 (453)
T ss_pred CCCCcH---HHH----HHHHHHHHhC-CCeEEE
Confidence 665421 222 2344556667 666654
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00011 Score=67.99 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=71.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
.+|+|.| .|.+|+++++.|.++|++|++++.+ +++. +.+++.+...+.+|.+|++.++++ ++++|.++-+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d-----~~~~---~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETS-----RTRV---DELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECC-----HHHH---HHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 4688999 9999999999999999999999998 6666 334456899999999999999876 4688988877
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+... ...+++.++++..+..+++.
T Consensus 489 ~~~~~-------~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 489 IPNGY-------EAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred cCChH-------HHHHHHHHHHHHCCCCeEEE
Confidence 65432 22345555555442444443
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.93 E-value=5e-05 Score=59.14 Aligned_cols=75 Identities=24% Similarity=0.374 Sum_probs=48.5
Q ss_pred CCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC
Q 021470 2 EKSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65 (312)
Q Consensus 2 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d 65 (312)
..++||||+| ||..|.+|++++..+|++|+.+....+-. .+.+++.+... +
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~i~v~--s 68 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-----------PPPGVKVIRVE--S 68 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-S--S
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-----------ccccceEEEec--c
Confidence 4578888876 79999999999999999999998873211 13467666653 4
Q ss_pred H----HHHHHHhccCCEEEEcCCCCccc
Q 021470 66 Y----QSLVNAVKLVDVVICAISGVHIR 89 (312)
Q Consensus 66 ~----~~l~~~~~~~d~v~~~~~~~~~~ 89 (312)
. +.+.+.+..+|++|++|+..++.
T Consensus 69 a~em~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 69 AEEMLEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred hhhhhhhhccccCcceeEEEecchhhee
Confidence 4 44444455789999999988754
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.6e-05 Score=56.01 Aligned_cols=74 Identities=27% Similarity=0.367 Sum_probs=54.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+| +|..|+.++..|.+.|. +|+++.|+ .+|++.+. .+....++++.. . ++.+.+..+|+||
T Consensus 12 ~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt-----~~ra~~l~~~~~~~~~~~~~~--~---~~~~~~~~~DivI 80 (135)
T PF01488_consen 12 GKRVLVIG-AGGAARAVAAALAALGAKEITIVNRT-----PERAEALAEEFGGVNIEAIPL--E---DLEEALQEADIVI 80 (135)
T ss_dssp TSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESS-----HHHHHHHHHHHTGCSEEEEEG--G---GHCHHHHTESEEE
T ss_pred CCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECC-----HHHHHHHHHHcCccccceeeH--H---HHHHHHhhCCeEE
Confidence 47999999 59999999999999995 59999998 77776443 332334444433 2 3446678899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
++.+...
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9998764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0002 Score=54.91 Aligned_cols=39 Identities=28% Similarity=0.379 Sum_probs=32.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM 47 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 47 (312)
|++|.++| .|..|+.+++.|++.|++|+++.|+ +++.+.
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~-----~~~~~~ 39 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRS-----PEKAEA 39 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESS-----HHHHHH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccc-----hhhhhh
Confidence 57999999 8999999999999999999999998 777643
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=8.6e-05 Score=58.03 Aligned_cols=72 Identities=24% Similarity=0.175 Sum_probs=49.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+++|.| +|.||..+++.|.+.||+|.+-+|+..+ +.........+. + ..-+..++.+.+|+||..
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~----~~~a~a~~l~~~---i-----~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPK----ALAAAAAALGPL---I-----TGGSNEDAAALADVVVLA 67 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChh----HHHHHHHhhccc---c-----ccCChHHHHhcCCEEEEe
Confidence 46888877 9999999999999999999999776432 222111111222 1 122344567789999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 68 VP~~a 72 (211)
T COG2085 68 VPFEA 72 (211)
T ss_pred ccHHH
Confidence 87654
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=59.79 Aligned_cols=97 Identities=23% Similarity=0.315 Sum_probs=74.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+|||+|||+- |+.+++.|.+.|+ |.+.+-.+... +. ..-.....+++.+-+.+.+.+.+.++ +++.||.
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~---~~---~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vID 72 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGG---EL---LKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVID 72 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhH---hh---hccccCCceEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 69999999887 8999999999998 55543332211 00 10112467888898889999999986 8999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
..-+.. ...++|+.++|++.| ++.+=+
T Consensus 73 ATHPfA-----~~is~na~~a~~~~~-ipylR~ 99 (249)
T PF02571_consen 73 ATHPFA-----AEISQNAIEACRELG-IPYLRF 99 (249)
T ss_pred CCCchH-----HHHHHHHHHHHhhcC-cceEEE
Confidence 988776 778999999999999 887665
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.90 E-value=7.8e-05 Score=64.15 Aligned_cols=86 Identities=15% Similarity=0.224 Sum_probs=56.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEE---EEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETY---VLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+|+|+||||++|+.+++.|.+++|.+. .+++..+.. +.+...+...+..|+. . ..+.++|+||.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g--------~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~ 67 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG--------RKVTFKGKELEVNEAK-I----ESFEGIDIALF 67 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC--------CeeeeCCeeEEEEeCC-h----HHhcCCCEEEE
Confidence 589999999999999999999887544 444653322 1222234556666663 2 23578999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+++... ...++..+.+.| + .+|
T Consensus 68 a~g~~~--------s~~~a~~~~~~G-~-~VI 89 (339)
T TIGR01296 68 SAGGSV--------SKEFAPKAAKCG-A-IVI 89 (339)
T ss_pred CCCHHH--------HHHHHHHHHHCC-C-EEE
Confidence 988643 445566666677 5 455
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.8e-05 Score=61.69 Aligned_cols=88 Identities=19% Similarity=0.144 Sum_probs=57.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|++|+|+|++|.+|+.+++.+.+. +.++.++...... +. ... -..++...+++.++++++|+|+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~----~~---~~~-------~~~~i~~~~dl~~ll~~~DvVid 66 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGS----PL---VGQ-------GALGVAITDDLEAVLADADVLID 66 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc----cc---ccc-------CCCCccccCCHHHhccCCCEEEE
Confidence 469999999999999999988865 5788876544221 11 000 11233233456666678999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
++.+. ....++.+|.++| ++++.
T Consensus 67 ~t~p~--------~~~~~~~~al~~G--~~vvi 89 (257)
T PRK00048 67 FTTPE--------ATLENLEFALEHG--KPLVI 89 (257)
T ss_pred CCCHH--------HHHHHHHHHHHcC--CCEEE
Confidence 88543 3466777788888 45553
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00012 Score=62.55 Aligned_cols=88 Identities=18% Similarity=0.076 Sum_probs=62.2
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-------eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHH----------
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH-------ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQ---------- 67 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---------- 67 (312)
+|+|+||+|.+|+.++..|...+. +++.++++.... ..+-...|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 589999999999999999987552 688888863211 1222233333322
Q ss_pred -HHHHHhccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHh
Q 021470 68 -SLVNAVKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEA 106 (312)
Q Consensus 68 -~l~~~~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~ 106 (312)
+..+.++++|+|+++++..... ..|+...+.+....+++
T Consensus 67 ~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 67 HDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred CChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3356788999999999986432 16777788888888887
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00017 Score=61.39 Aligned_cols=100 Identities=19% Similarity=0.187 Sum_probs=61.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCC--CCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPE--IGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+|.|+||||.+|..++..|+..|+ +|++++|.. ........+..+.+...+... .....+ +.. .++++|+|
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~~-~l~~aDiV 76 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DLS-DVAGSDIV 76 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CHH-HhCCCCEE
Confidence 5899999999999999999999985 599999953 111111111111111111111 111111 122 38899999
Q ss_pred EEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
|.+++..... ..|....+.+++...+.+
T Consensus 77 iitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~ 112 (309)
T cd05294 77 IITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFA 112 (309)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999965422 145566777777777765
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0002 Score=66.75 Aligned_cols=94 Identities=20% Similarity=0.269 Sum_probs=74.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++|+|.| .|.+|+.+++.|.++|+++++++++ +++.+ .++..+..++.||.++++.++++ ++++|.++.+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~---~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERD-----ISAVN---LMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECC-----HHHHH---HHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 5788899 9999999999999999999999998 77764 34456899999999999999986 5689998887
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.+.. .....++..+++..+..+++
T Consensus 472 ~~d~-------~~n~~i~~~~r~~~p~~~Ii 495 (601)
T PRK03659 472 CNEP-------EDTMKIVELCQQHFPHLHIL 495 (601)
T ss_pred eCCH-------HHHHHHHHHHHHHCCCCeEE
Confidence 7653 34556777777765233444
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.82 E-value=4.9e-05 Score=61.53 Aligned_cols=63 Identities=21% Similarity=0.301 Sum_probs=44.9
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh-------ccCCEEEEcC
Q 021470 11 GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV-------KLVDVVICAI 83 (312)
Q Consensus 11 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~-------~~~d~v~~~~ 83 (312)
++|.+|+++++.|+++|++|++++|... +.... ...+|+.+.++..+++ .++|++||+|
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~------------l~~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA 88 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRA------------LKPEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSM 88 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhh------------ccccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4899999999999999999999876411 10101 1346777776665543 3689999999
Q ss_pred CCCc
Q 021470 84 SGVH 87 (312)
Q Consensus 84 ~~~~ 87 (312)
+...
T Consensus 89 gv~d 92 (227)
T TIGR02114 89 AVSD 92 (227)
T ss_pred Eecc
Confidence 8654
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00024 Score=61.08 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=54.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|+|+||||++|+.+++.|.+++| ++..++...+.. +.+...+......++ +++ .+.++|+|
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaG--------k~~~~~~~~~~v~~~-~~~----~~~~~D~v 73 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAG--------KKVTFEGRDYTVEEL-TED----SFDGVDIA 73 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCC--------CeeeecCceeEEEeC-CHH----HHcCCCEE
Confidence 47899999999999999999998776 444443332211 111112333333344 222 34689999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|.+++.. ....++..+.+.| + .+|
T Consensus 74 f~a~p~~--------~s~~~~~~~~~~g-~-~VI 97 (344)
T PLN02383 74 LFSAGGS--------ISKKFGPIAVDKG-A-VVV 97 (344)
T ss_pred EECCCcH--------HHHHHHHHHHhCC-C-EEE
Confidence 9988754 3445666666667 3 444
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=64.74 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH--------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-------- 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-------- 72 (312)
|.+|+|.|+| .|++|..++..|.+.||+|++++++ +++.+. +......+...++. +.+.+.
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~-----~~~v~~---l~~g~~~~~e~~l~--~~l~~~~~~g~l~~ 69 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASRQKQVIGVDIN-----QHAVDT---INRGEIHIVEPDLD--MVVKTAVEGGYLRA 69 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCC-----HHHHHH---HHCCCCCcCCCCHH--HHHHHHhhcCceee
Confidence 8889999999 8999999999999999999999998 666633 32222222111111 111111
Q ss_pred ---hccCCEEEEcCCCC
Q 021470 73 ---VKLVDVVICAISGV 86 (312)
Q Consensus 73 ---~~~~d~v~~~~~~~ 86 (312)
.+++|+||.|.+..
T Consensus 70 ~~~~~~aDvvii~vptp 86 (415)
T PRK11064 70 TTTPEPADAFLIAVPTP 86 (415)
T ss_pred ecccccCCEEEEEcCCC
Confidence 23689999988875
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00012 Score=63.23 Aligned_cols=93 Identities=22% Similarity=0.233 Sum_probs=54.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEE-EccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLV-SGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v-~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|+|+||||++|..+++.|.+. +.++..+ +++.+.. .+.. +.. ..+... ..++.+. +..+++.++|+||
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sag--k~~~--~~~--~~l~~~~~~~~~~~-~~~~~~~~~DvVf 73 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAG--KPVS--EVH--PHLRGLVDLNLEPI-DEEEIAEDADVVF 73 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcC--CChH--HhC--ccccccCCceeecC-CHHHhhcCCCEEE
Confidence 48999999999999999999987 4688854 4432111 0010 001 111111 1112211 1223335899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.|.+.. ....++..+.++| +++|
T Consensus 74 ~alP~~--------~s~~~~~~~~~~G--~~VI 96 (346)
T TIGR01850 74 LALPHG--------VSAELAPELLAAG--VKVI 96 (346)
T ss_pred ECCCch--------HHHHHHHHHHhCC--CEEE
Confidence 998754 3567777777777 4566
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.72 E-value=7.9e-05 Score=58.28 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=51.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc-------------CCCHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS-------------FNDYQSLV 70 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D-------------~~d~~~l~ 70 (312)
|+|.|+| .|++|..++..|.+.||+|++++.+ +++.+. +......+..-. +.-..+..
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~-----~~~v~~---l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~ 71 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDID-----EEKVEA---LNNGELPIYEPGLDELLKENVSAGRLRATTDIE 71 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S------HHHHHH---HHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCC-----hHHHHH---Hhhccccccccchhhhhccccccccchhhhhhh
Confidence 6999998 9999999999999999999999998 666633 222222111111 10012334
Q ss_pred HHhccCCEEEEcCCCCcccc--chhHhHHHHHHHHHHh
Q 021470 71 NAVKLVDVVICAISGVHIRS--HQILLQLKLVDAIKEA 106 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~~~--~~~~~~~~l~~aa~~~ 106 (312)
+++..+|++|.|.+.....+ .+.......++...+.
T Consensus 72 ~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~ 109 (185)
T PF03721_consen 72 EAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPV 109 (185)
T ss_dssp HHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHH
T ss_pred hhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHH
Confidence 44557899999998665332 3455555555555443
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=60.67 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=75.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHH-HHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQ-SLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~-~l~~~~~~~d~v~ 80 (312)
+++||++| +||+.+-++..|.+++ -+|++.+|. ..+++. .....+++.|..|+.+++ .+++..+..|.++
T Consensus 2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~-----~~~~~~--~~~~~~~~av~ldv~~~~~~L~~~v~~~D~vi 73 (445)
T KOG0172|consen 2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRT-----LKDAEA--LVKGINIKAVSLDVADEELALRKEVKPLDLVI 73 (445)
T ss_pred CcceEEec-CccccchHHHHHhhcCCceEEEehhh-----HHHHHH--HhcCCCccceEEEccchHHHHHhhhcccceee
Confidence 57899999 9999999999999887 689998887 333422 223466999999999988 9999999999999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
.+.+... ...+..+|...+ ++.+.|+|-.
T Consensus 74 SLlP~t~--------h~lVaK~~i~~~--~~~vtsSyv~ 102 (445)
T KOG0172|consen 74 SLLPYTF--------HPLVAKGCIITK--EDSVTSSYVD 102 (445)
T ss_pred eeccchh--------hHHHHHHHHHhh--cccccccccC
Confidence 9887654 335556666554 6666665544
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0001 Score=59.49 Aligned_cols=75 Identities=29% Similarity=0.359 Sum_probs=49.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-----hccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-----FKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+|.|+||+|.+|..++..|.+.|++|.+.+|+ +++.+.+.. +...++.. ..-..+ ..++++.+|+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~-----~~~~~~l~~~~~~~~~~~g~~~-~~~~~~---~~ea~~~aDv 71 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRD-----LEKAEEAAAKALEELGHGGSDI-KVTGAD---NAEAAKRADV 71 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcC-----HHHHHHHHHHHHhhccccCCCc-eEEEeC---hHHHHhcCCE
Confidence 479999999999999999999999999999997 444432211 11112110 000112 2345678999
Q ss_pred EEEcCCCCc
Q 021470 79 VICAISGVH 87 (312)
Q Consensus 79 v~~~~~~~~ 87 (312)
||.+.....
T Consensus 72 Vilavp~~~ 80 (219)
T TIGR01915 72 VILAVPWDH 80 (219)
T ss_pred EEEECCHHH
Confidence 999887543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00021 Score=61.12 Aligned_cols=94 Identities=26% Similarity=0.258 Sum_probs=62.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEc--------c-----CCCHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG--------S-----FNDYQSLV 70 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~--------D-----~~d~~~l~ 70 (312)
|+|.|+| +|++|......|.+.||+|++++.+ ++|...+. .....++.- + +.=..+.+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid-----~~KV~~ln---~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~ 71 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDID-----ESKVELLN---KGISPIYEPGLEELLKENLASGRLRFTTDYE 71 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCC-----HHHHHHHh---CCCCCCcCccHHHHHHhccccCcEEEEcCHH
Confidence 6899999 9999999999999999999999988 66664332 222211111 1 11124567
Q ss_pred HHhccCCEEEEcCCCCccc--cchhHhHHHHHHHHHHh
Q 021470 71 NAVKLVDVVICAISGVHIR--SHQILLQLKLVDAIKEA 106 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~~--~~~~~~~~~l~~aa~~~ 106 (312)
++++.+|++|.+.|.+... ..+.......++...+.
T Consensus 72 ~a~~~adv~fIavgTP~~~dg~aDl~~V~ava~~i~~~ 109 (414)
T COG1004 72 EAVKDADVVFIAVGTPPDEDGSADLSYVEAVAKDIGEI 109 (414)
T ss_pred HHHhcCCEEEEEcCCCCCCCCCccHHHHHHHHHHHHhh
Confidence 7788999999999977643 23344444444444444
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00059 Score=63.80 Aligned_cols=88 Identities=26% Similarity=0.371 Sum_probs=71.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++|+|.| .|.+|+.+++.|.++|++++++..+ +++.+ .++..+..++.+|.++++.++++ ++++|.++.+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d-----~~~v~---~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHD-----PDHIE---TLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred CcEEEEe-cChHHHHHHHHHHhCCCCEEEEECC-----HHHHH---HHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 5789999 9999999999999999999999998 77763 44456899999999999999875 5589999888
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
... .+....++..+++..
T Consensus 472 ~~d-------~~~n~~i~~~ar~~~ 489 (621)
T PRK03562 472 IDD-------PQTSLQLVELVKEHF 489 (621)
T ss_pred eCC-------HHHHHHHHHHHHHhC
Confidence 754 334456666777654
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00039 Score=48.13 Aligned_cols=69 Identities=35% Similarity=0.468 Sum_probs=48.6
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC---CeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG---HETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
||.|+| +|.+|.+|++.|++.| ++|... .|+ +++.+.+.. ..++..... +..++++.+|+||
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~-----~~~~~~~~~--~~~~~~~~~------~~~~~~~~advvi 66 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRS-----PEKAAELAK--EYGVQATAD------DNEEAAQEADVVI 66 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESS-----HHHHHHHHH--HCTTEEESE------EHHHHHHHTSEEE
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCc-----HHHHHHHHH--hhccccccC------ChHHhhccCCEEE
Confidence 688997 9999999999999999 999965 888 777754432 223333322 2344556899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+..+..
T Consensus 67 lav~p~~ 73 (96)
T PF03807_consen 67 LAVKPQQ 73 (96)
T ss_dssp E-S-GGG
T ss_pred EEECHHH
Confidence 9988765
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00066 Score=57.99 Aligned_cols=148 Identities=14% Similarity=0.089 Sum_probs=84.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--C-----eEEEEECCCCCCChHHHHHhhhhcc------CCCeEEEccCCCHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--H-----ETYVLHRPEIGVDIEKVQMLLSFKE------QGAKLVSGSFNDYQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~~~~~~~~~~~~l~~------~~~~~v~~D~~d~~~l 69 (312)
.+||.|+||+|++|+.++..|+..| - ++..++...... ..+... .++.+ .++.+ . -.+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~-~a~g~a-~Dl~~~~~~~~~~~~i-~--~~~---- 72 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALK-ALEGVA-MELEDCAFPLLAEIVI-T--DDP---- 72 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCccc-ccceee-hhhhhccccccCceEE-e--cCc----
Confidence 4699999999999999999999877 3 788888853321 011111 11111 11221 1 122
Q ss_pred HHHhccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCC-Cceee-cCCCCCCcccc------ccc-CCCCC
Q 021470 70 VNAVKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGN-VKRFL-PSEFGTDPAKM------ANA-MEPGR 132 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~-v~~~v-~S~~g~~~~~~------~~~-~~p~~ 132 (312)
.+.++++|+|+.+++..... ..|....+.+....++++. --.++ .|. +.+.+ ..+ .++..
T Consensus 73 ~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN---PvD~~t~~~~k~sg~~p~~~ 149 (322)
T cd01338 73 NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN---PCNTNALIAMKNAPDIPPDN 149 (322)
T ss_pred HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC---cHHHHHHHHHHHcCCCChHh
Confidence 34578999999999975422 1677778888888888761 11222 231 11110 222 33333
Q ss_pred chhhhHHHHHHHH----HHhCCCeEEEecccccc
Q 021470 133 VTFDDKMVVRKAI----EDAGIPFTYVSANCFAG 162 (312)
Q Consensus 133 ~~~~~K~~~e~~~----~~~~~~~~i~r~~~~~~ 162 (312)
.+..++...+++. +..+++...+|.-.++|
T Consensus 150 ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~G 183 (322)
T cd01338 150 FTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWG 183 (322)
T ss_pred eEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEe
Confidence 3333555544443 34688877787645433
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00049 Score=59.30 Aligned_cols=90 Identities=18% Similarity=0.253 Sum_probs=55.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCe---EEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHE---TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~---V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++|.|+||||++|+.+++.|+++ .+. ++.++...+.. +. -.+.. -.....+..+++. +.++|+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~---~~---~~f~g--~~~~v~~~~~~~~----~~~~Di 68 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG---AA---PSFGG--KEGTLQDAFDIDA----LKKLDI 68 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC---cc---cccCC--CcceEEecCChhH----hcCCCE
Confidence 369999999999999999966655 455 66655442221 11 11222 1223334444443 468999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
||.+++.. ....+...+.++| ++-+|
T Consensus 69 vf~a~~~~--------~s~~~~~~~~~aG-~~~~V 94 (369)
T PRK06598 69 IITCQGGD--------YTNEVYPKLRAAG-WQGYW 94 (369)
T ss_pred EEECCCHH--------HHHHHHHHHHhCC-CCeEE
Confidence 99998643 4567777777778 65333
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0002 Score=61.14 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=31.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
+++|.|+| .|.+|..++..|++.|++|++++|+
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~ 34 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDAD 34 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCC
Confidence 36899999 9999999999999999999999998
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0004 Score=52.75 Aligned_cols=73 Identities=25% Similarity=0.321 Sum_probs=50.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+|+ |.+|..+++.|.+.| ++|+++.|+ +++.+.+ +.+... .+..+..+. .++++++|+|+
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~-----~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~Dvvi 86 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRT-----LEKAKALAERFGEL---GIAIAYLDL---EELLAEADLII 86 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHhhc---ccceeecch---hhccccCCEEE
Confidence 478999995 999999999999996 889999998 5554322 222111 122233343 33468899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
++++...
T Consensus 87 ~~~~~~~ 93 (155)
T cd01065 87 NTTPVGM 93 (155)
T ss_pred eCcCCCC
Confidence 9998765
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00086 Score=57.39 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=53.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|.|+||||++|+.+++.|.++. .++..++...+... + -.+....+.+ + ++ +. ..+.++|+|
T Consensus 4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~--~----~~~~~~~~~v-~-~~---~~--~~~~~~Dvv 70 (336)
T PRK08040 4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGE--T----LRFGGKSVTV-Q-DA---AE--FDWSQAQLA 70 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCc--e----EEECCcceEE-E-eC---ch--hhccCCCEE
Confidence 5799999999999999999998854 47777755432211 0 0111111111 1 22 11 124689999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|.+++.. ....++..+.++| + .+|
T Consensus 71 f~a~p~~--------~s~~~~~~~~~~g-~-~VI 94 (336)
T PRK08040 71 FFVAGRE--------ASAAYAEEATNAG-C-LVI 94 (336)
T ss_pred EECCCHH--------HHHHHHHHHHHCC-C-EEE
Confidence 9998643 3556666666677 4 444
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0011 Score=53.24 Aligned_cols=96 Identities=21% Similarity=0.250 Sum_probs=72.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
+++|+|+|||+- ++.|++.|...+..+++.+-.+...++ .......+.+-..+.+.+.+.++ ++|.+|
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l---------~~~~~~~~~~G~l~~e~l~~~l~e~~i~llI 71 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAKL---------AEQIGPVRVGGFLGAEGLAAFLREEGIDLLI 71 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccccc---------hhccCCeeecCcCCHHHHHHHHHHcCCCEEE
Confidence 579999999887 899999999988555544433332211 11222255666779999999987 799999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
...-+.. .+.++|.+++|++.| ++.+-+
T Consensus 72 DATHPyA-----a~iS~Na~~aake~g-ipy~r~ 99 (257)
T COG2099 72 DATHPYA-----ARISQNAARAAKETG-IPYLRL 99 (257)
T ss_pred ECCChHH-----HHHHHHHHHHHHHhC-CcEEEE
Confidence 9887765 788999999999999 888877
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00056 Score=57.04 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=45.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL--GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++++|.|+| .|.+|+.+++.|.+. ++++.++ +|+ +++.+.+.. ..+... -+.+.+ +++.++|
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~-----~~~a~~~a~--~~g~~~---~~~~~e---ell~~~D 69 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRD-----PQRHADFIW--GLRRPP---PVVPLD---QLATHAD 69 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCC-----HHHHHHHHH--hcCCCc---ccCCHH---HHhcCCC
Confidence 4568999999 899999999999873 6788765 444 545432211 111100 123444 4456789
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+|+-+++..
T Consensus 70 ~Vvi~tp~~ 78 (271)
T PRK13302 70 IVVEAAPAS 78 (271)
T ss_pred EEEECCCcH
Confidence 999888753
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00059 Score=57.80 Aligned_cols=97 Identities=19% Similarity=0.140 Sum_probs=64.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|||.|+|++|++|++++..|...+ .++..++.+ .. +... ..|.+.-. ..+.+ ....+++.+.++++|+|+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a---~g~a-lDL~~~~~~~~i~~-~~~~~~~y~~~~daDivv 73 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NT---PGVA-ADLSHINTPAKVTG-YLGPEELKKALKGADVVV 73 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--cc---ceee-hHhHhCCCcceEEE-ecCCCchHHhcCCCCEEE
Confidence 589999999999999999998888 588888876 11 1111 11222111 11221 101123456688999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
.++|..... ..|....+.+++..++++
T Consensus 74 itaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~ 108 (310)
T cd01337 74 IPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKAC 108 (310)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999985422 167777888888888887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.027 Score=47.84 Aligned_cols=89 Identities=19% Similarity=0.157 Sum_probs=54.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|++.+|.|+| +|.+|+.+++.+.+. +.++.++..... +++. ..++... ...| ...++.++|+|
T Consensus 1 M~kIRVgIVG-~GnIGr~~a~al~~~pd~ELVgV~dr~~---~~~~-------~~~~~v~--~~~d---~~e~l~~iDVV 64 (324)
T TIGR01921 1 MSKIRAAIVG-YGNLGRSVEKAIQQQPDMELVGVFSRRG---AETL-------DTETPVY--AVAD---DEKHLDDVDVL 64 (324)
T ss_pred CCCcEEEEEe-ecHHHHHHHHHHHhCCCcEEEEEEcCCc---HHHH-------hhcCCcc--ccCC---HHHhccCCCEE
Confidence 7778999999 899999999999876 588888644321 1222 1122211 1123 33345789999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+.|++.... ...+..+.++| +++|-|
T Consensus 65 iIctPs~th--------~~~~~~~L~aG--~NVV~s 90 (324)
T TIGR01921 65 ILCMGSATD--------IPEQAPYFAQF--ANTVDS 90 (324)
T ss_pred EEcCCCccC--------HHHHHHHHHcC--CCEEEC
Confidence 999765431 23333344556 566655
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00073 Score=56.78 Aligned_cols=69 Identities=26% Similarity=0.384 Sum_probs=51.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+| .|.+|+.+++.|...|.+|+++.|+ +++.... ...+...+ +.+++.+.++++|+||++
T Consensus 151 gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~-----~~~~~~~---~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 151 GSNVMVLG-FGRTGMTIARTFSALGARVFVGARS-----SADLARI---TEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHH---HHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 47899999 6999999999999999999999998 4443221 12233322 345677788899999998
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 217 ~P~ 219 (287)
T TIGR02853 217 IPA 219 (287)
T ss_pred CCh
Confidence 754
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0017 Score=55.42 Aligned_cols=97 Identities=16% Similarity=0.276 Sum_probs=62.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.+||.|+|+ |.+|+.++..|+..|. ++..++++.........+..+.... .++.+. . .+.+ .++++|+|
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~----~~~~adiv 77 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYS----DCKDADLV 77 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHH----HhCCCCEE
Confidence 468999997 9999999999999884 8999998743321111111111100 122222 2 2322 37899999
Q ss_pred EEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+.+++..... ..|....+.+++.+++++
T Consensus 78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~ 113 (315)
T PRK00066 78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASG 113 (315)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999975422 156777888888888876
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00082 Score=56.59 Aligned_cols=93 Identities=24% Similarity=0.212 Sum_probs=54.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+||.|.||+|+.|..|++.|..+. .++...+.+....++-. +.... .+..-......|++.+ ..++||+||
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~----~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvF 75 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVS----DVHPNLRGLVDLPFQTIDPEKI--ELDECDVVF 75 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchH----HhCcccccccccccccCChhhh--hcccCCEEE
Confidence 5899999999999999999999987 47666655431111111 11110 1111112222244444 355799999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
.+.+... ...++....+.| ++
T Consensus 76 lalPhg~--------s~~~v~~l~~~g-~~ 96 (349)
T COG0002 76 LALPHGV--------SAELVPELLEAG-CK 96 (349)
T ss_pred EecCchh--------HHHHHHHHHhCC-Ce
Confidence 9987653 345555555556 44
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00079 Score=56.87 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=51.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|.+|.|+||||++|..+++.|.++. .++..++.+... ++.+ ....+.++|+||.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------------~~~~---~~~~~~~~DvvFl 56 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------------DAAA---RRELLNAADVAIL 56 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------------cccC---chhhhcCCCEEEE
Confidence 5799999999999999999998887 466666554110 1111 1234568999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.+.. ....++..+.+.| + ++|
T Consensus 57 alp~~--------~s~~~~~~~~~~g-~-~VI 78 (313)
T PRK11863 57 CLPDD--------AAREAVALIDNPA-T-RVI 78 (313)
T ss_pred CCCHH--------HHHHHHHHHHhCC-C-EEE
Confidence 88643 3445666666667 4 455
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00034 Score=60.28 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=51.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccC-----CCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ-----GAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
+|+|.|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+...... +... ...+.-.++..++++++|
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~-----~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD 76 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARR-----PEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGAD 76 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCC
Confidence 57999999 8999999999999999999999997 5555333322110 1110 000111123445567899
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+|+.+....
T Consensus 77 ~Vi~~v~~~ 85 (328)
T PRK14618 77 FAVVAVPSK 85 (328)
T ss_pred EEEEECchH
Confidence 999888764
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00031 Score=61.43 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=32.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
+++|+|+||.|.+|..+++.|.+.|++|+++.|+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 4789999999999999999999999999999886
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0017 Score=55.88 Aligned_cols=101 Identities=23% Similarity=0.229 Sum_probs=66.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCC----------------ChHHHH----Hhhhh-ccCCCeEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGV----------------DIEKVQ----MLLSF-KEQGAKLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~~----~~~~l-~~~~~~~v~ 60 (312)
.++|+|+| .|.+|.++++.|...|. ++++++++.-+. ...|+. .+..+ ..-.++.+.
T Consensus 24 ~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 24 EKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 46899999 68899999999999996 888887763110 011222 11222 122345566
Q ss_pred ccCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 61 ~D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.|++ .+.+.++++++|+|+.+... ...-..+-++|.+.+ ++.+.
T Consensus 103 ~~~~-~~~~~~~~~~~DlVid~~D~-------~~~r~~in~~~~~~~-ip~i~ 146 (338)
T PRK12475 103 TDVT-VEELEELVKEVDLIIDATDN-------FDTRLLINDLSQKYN-IPWIY 146 (338)
T ss_pred ccCC-HHHHHHHhcCCCEEEEcCCC-------HHHHHHHHHHHHHcC-CCEEE
Confidence 6664 56788889999999998743 333344667888888 66554
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00053 Score=58.21 Aligned_cols=69 Identities=29% Similarity=0.334 Sum_probs=50.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+ |+|.|+| .|.+|..+++.|.+.|++|.++.|+ +++.+. +...++.. .+++.++++.+|+||
T Consensus 1 ~~-~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~-----~~~~~~---~~~~g~~~-------~~~~~e~~~~~d~vi 63 (296)
T PRK11559 1 MT-MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRN-----PEAVAE---VIAAGAET-------ASTAKAVAEQCDVII 63 (296)
T ss_pred CC-ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHH---HHHCCCee-------cCCHHHHHhcCCEEE
Confidence 54 6899999 8999999999999999999999888 555532 22233321 123445567899999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 64 ~~vp~~ 69 (296)
T PRK11559 64 TMLPNS 69 (296)
T ss_pred EeCCCH
Confidence 988653
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00071 Score=57.41 Aligned_cols=70 Identities=17% Similarity=0.242 Sum_probs=53.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..+++.|.+.|++|.++.|+ +++.+.+. ..++.. ..+.+++.+.++.+|+|+.+.
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~-----~~~~~~l~---~~g~~~----~~s~~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHD-----QDAVKAMK---EDRTTG----VANLRELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HcCCcc----cCCHHHHHhhcCCCCEEEEEc
Confidence 4799999 8999999999999999999999998 66664333 233322 245666666677899999987
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
...
T Consensus 68 p~~ 70 (298)
T TIGR00872 68 PHG 70 (298)
T ss_pred Cch
Confidence 654
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0022 Score=54.95 Aligned_cols=84 Identities=17% Similarity=0.305 Sum_probs=52.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCe---EEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHE---TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++|.|+||||++|+.+++.|.+ ..++ +..++...+..+ + -.+... ....-++ |++. +.++|+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk--~----~~~~~~--~l~v~~~-~~~~----~~~~Di 71 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGK--T----VQFKGR--EIIIQEA-KINS----FEGVDI 71 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCC--C----eeeCCc--ceEEEeC-CHHH----hcCCCE
Confidence 46899999999999999999985 5566 666654422210 0 112122 2222223 4433 468999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
||.+++.. ..+.++..+.++|
T Consensus 72 vf~a~~~~--------~s~~~~~~~~~~G 92 (347)
T PRK06728 72 AFFSAGGE--------VSRQFVNQAVSSG 92 (347)
T ss_pred EEECCChH--------HHHHHHHHHHHCC
Confidence 99988643 3556676676777
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0028 Score=54.01 Aligned_cols=91 Identities=24% Similarity=0.364 Sum_probs=62.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhc------cCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFK------EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
++|.|+| +|.+|+.++..|+..| ++|.+++|+.. +++ ....+. ..+..+. . .+.+ .+.
T Consensus 1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~-----~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~----~l~ 67 (306)
T cd05291 1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEE-----KAEGEALDLEDALAFLPSPVKIK-A--GDYS----DCK 67 (306)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcc-----hhhHhHhhHHHHhhccCCCeEEE-c--CCHH----HhC
Confidence 4899999 5999999999999999 68999999743 321 112221 1122222 2 2333 357
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+||++++..... ..|....+.+.+.+++++
T Consensus 68 ~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~ 108 (306)
T cd05291 68 DADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASG 108 (306)
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999975422 157777888888888876
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0013 Score=56.11 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=59.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhh---hhccCCCe-EEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLL---SFKEQGAK-LVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~l~~~~~~-~v~~D~~d~~~l~~~~~~~d 77 (312)
|+||.|+|+ |.+|..++..|...|. +|++++++.... +....+ ........ .+.. -.| + +.++++|
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~---~~~~~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~aD 72 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVP---QGKALDIAEAAPVEGFDTKITG-TND---Y-EDIAGSD 72 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchh---HHHHHHHHhhhhhcCCCcEEEe-CCC---H-HHHCCCC
Confidence 579999997 9999999999998875 999999864322 121111 11111111 1111 123 2 2478999
Q ss_pred EEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 78 VVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 78 ~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
+||.+++...... .|....+.+++...+..
T Consensus 73 iVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~ 110 (307)
T PRK06223 73 VVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYA 110 (307)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999987654221 45566677777777665
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00078 Score=57.17 Aligned_cols=95 Identities=22% Similarity=0.209 Sum_probs=62.8
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccC--CCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQ--GAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
||.|+|++|.+|+.++..|...+ .++..++++. . .... ..|.+. ...+ .+ ..+.+++.+.++++|+|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a---~g~a-~DL~~~~~~~~i-~~-~~~~~~~~~~~~daDivv 72 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--A---AGVA-ADLSHIPTAASV-KG-FSGEEGLENALKGADVVV 72 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--C---cEEE-chhhcCCcCceE-EE-ecCCCchHHHcCCCCEEE
Confidence 68999999999999999998887 4888888864 1 1111 112221 1122 21 011123456789999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
.+++..... ..|....+.+.+...+++
T Consensus 73 itaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~ 107 (312)
T TIGR01772 73 IPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESC 107 (312)
T ss_pred EeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhC
Confidence 999975422 167777888888888876
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0012 Score=55.73 Aligned_cols=69 Identities=26% Similarity=0.367 Sum_probs=52.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+| .|.+|+.++..|...|.+|+++.|+ +++....+ ..+++++ +.+++.+.++++|+||++
T Consensus 152 g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~-----~~~~~~~~---~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 152 GSNVLVLG-FGRTGMTLARTLKALGANVTVGARK-----SAHLARIT---EMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 47899999 6899999999999999999999998 54443222 3344443 235677788899999998
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
++.
T Consensus 218 ~p~ 220 (296)
T PRK08306 218 IPA 220 (296)
T ss_pred CCh
Confidence 753
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0012 Score=51.54 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=46.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|..-|.+|++++|.. ..... ....++ ...++.++++.+|+|+.+
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~-----~~~~~---~~~~~~--------~~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSP-----KPEEG---ADEFGV--------EYVSLDELLAQADIVSLH 98 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSC-----HHHHH---HHHTTE--------EESSHHHHHHH-SEEEE-
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCceeEEecccC-----Chhhh---cccccc--------eeeehhhhcchhhhhhhh
Confidence 47999999 99999999999999999999999983 22210 111111 122466778889999888
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 99 ~plt~ 103 (178)
T PF02826_consen 99 LPLTP 103 (178)
T ss_dssp SSSST
T ss_pred hcccc
Confidence 87654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0026 Score=50.62 Aligned_cols=106 Identities=19% Similarity=0.251 Sum_probs=67.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCCeE--EEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGAKL--VSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~~~--v~~D 62 (312)
..+|+|+| .|.+|..+++.|...| .++++++++.-.. ...|++.+ +.+. .+.+++ +..+
T Consensus 21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 46899999 8999999999999999 4888887662110 01222211 1222 233333 3333
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
+ +.+.+.+.++++|+||.+... ...-..+-++|++.+ ++.+..+..|
T Consensus 100 i-~~~~~~~~~~~~D~Vi~~~d~-------~~~r~~l~~~~~~~~-ip~i~~~~~g 146 (202)
T TIGR02356 100 V-TAENLELLINNVDLVLDCTDN-------FATRYLINDACVALG-TPLISAAVVG 146 (202)
T ss_pred C-CHHHHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-CCEEEEEecc
Confidence 4 456677888999999998744 334455778888888 5544434433
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0023 Score=53.17 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=60.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHH-HHHhhhhc----------cCCCeEEEccCCCHHHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEK-VQMLLSFK----------EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~l~----------~~~~~~v~~D~~d~~~l~~~ 72 (312)
++|.++| .|..|..++..|++.||+|+++.|+ ++| .+.+.... ....++|..-+.|.++++++
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~-----~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRT-----PEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCC-----hhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHH
Confidence 4799999 9999999999999999999999999 666 32222110 11344555555666666666
Q ss_pred hccCCEEEEcCCCCc----cccchhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVH----IRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~----~~~~~~~~~~~l~~aa~~~~ 107 (312)
+.+.+.+...+.... ......+..+.+.+.+++.|
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G 113 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKG 113 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcC
Confidence 543322222111100 01122566777888888777
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0028 Score=50.51 Aligned_cols=86 Identities=21% Similarity=0.261 Sum_probs=62.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|.+-++.|++.|.+|++++.... ++-. +.....+++++..++.. + .+++++.||-+
T Consensus 9 gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~---~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~a 76 (205)
T TIGR01470 9 GRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE---SELT---LLAEQGGITWLARCFDA-D----ILEGAFLVIAA 76 (205)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC---HHHH---HHHHcCCEEEEeCCCCH-H----HhCCcEEEEEC
Confidence 57999999 899999999999999999999977532 1111 11223478999988863 2 25788988877
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+.. .....+...|++.+
T Consensus 77 t~d~-------~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 77 TDDE-------ELNRRVAHAARARG 94 (205)
T ss_pred CCCH-------HHHHHHHHHHHHcC
Confidence 6543 23457888888776
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0019 Score=55.17 Aligned_cols=100 Identities=15% Similarity=0.057 Sum_probs=62.5
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCC--C-----eEEEEECCCCC--CChHHHHHhhhh-c-cCCCeEEEccCCCHHH
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALG--H-----ETYVLHRPEIG--VDIEKVQMLLSF-K-EQGAKLVSGSFNDYQS 68 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~--~~~~~~~~~~~l-~-~~~~~~v~~D~~d~~~ 68 (312)
|. ++||.|+||+|.+|+.++..|+..+ . ++..++.+... ..-...+..+.. . ..++.+ .. .
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~------~ 73 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD------D 73 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec------C
Confidence 44 6799999999999999999998876 3 78888875321 101111111110 0 012221 11 1
Q ss_pred HHHHhccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 69 LVNAVKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
..+.++++|+|+.+++..... ..|....+.+....+++.
T Consensus 74 ~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 120 (326)
T PRK05442 74 PNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA 120 (326)
T ss_pred hHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 234578999999999965421 267777888888888854
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0028 Score=54.64 Aligned_cols=101 Identities=20% Similarity=0.273 Sum_probs=67.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCC----------------ChHHHHHh-hhhc--cC--CCeEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGV----------------DIEKVQML-LSFK--EQ--GAKLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~~~~-~~l~--~~--~~~~v~ 60 (312)
..+|+|+| .|.+|+.++..|...|. ++++++++.-.. ...|.... +.+. .+ .++.+.
T Consensus 24 ~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 24 EKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 46899999 69999999999999995 899888752100 00122211 2222 22 344555
Q ss_pred ccCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 61 ~D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.++ +.+.+.+.++++|+|+.+... ......+-++|.+.+ ++.+.
T Consensus 103 ~~~-~~~~~~~~~~~~DlVid~~Dn-------~~~r~~ln~~~~~~~-iP~i~ 146 (339)
T PRK07688 103 QDV-TAEELEELVTGVDLIIDATDN-------FETRFIVNDAAQKYG-IPWIY 146 (339)
T ss_pred ccC-CHHHHHHHHcCCCEEEEcCCC-------HHHHHHHHHHHHHhC-CCEEE
Confidence 566 456677788999999998653 444556788898888 66554
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0021 Score=52.03 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=28.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEE-EECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYV-LHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~-~~r~~ 37 (312)
|++|+|.|++|..|+.+++.+.+.. .++.+ +.|.+
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~ 38 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG 38 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence 5799999999999999999999876 55554 45553
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00058 Score=58.81 Aligned_cols=76 Identities=22% Similarity=0.356 Sum_probs=49.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccC-----CCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ-----GAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
||+|.|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+...... +... .....-..+..++++++|
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D 73 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARD-----PEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADAD 73 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCC
Confidence 36899999 7999999999999999999999998 5554332221000 0000 000111123445667899
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||.+...
T Consensus 74 ~vi~~v~~ 81 (325)
T PRK00094 74 LILVAVPS 81 (325)
T ss_pred EEEEeCCH
Confidence 99999875
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00074 Score=57.01 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|.+++|.|+| +|.+|..++..|.+.|++|++++++
T Consensus 1 ~~~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~ 35 (287)
T PRK08293 1 MDIKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDIS 35 (287)
T ss_pred CCccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 5568999999 7999999999999999999999998
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00071 Score=57.35 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=49.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
++|.|+| .|.+|..+++.|++.|++|+++.|+ +++.+. +...++.. ..+..++++++|+||.+.
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~-----~~~~~~---~~~~g~~~-------~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVN-----PQAVDA---LVDKGATP-------AASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHH---HHHcCCcc-------cCCHHHHHhcCCEEEEec
Confidence 5899999 9999999999999999999999998 656533 22223321 123345667899999888
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
+..
T Consensus 66 p~~ 68 (296)
T PRK15461 66 PNG 68 (296)
T ss_pred CCH
Confidence 754
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0027 Score=53.95 Aligned_cols=69 Identities=28% Similarity=0.350 Sum_probs=46.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..+++.|++.|++|.+++|+ +++.+.+. ..++.. ..+++++.+.+.++|+|+.+.
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~-----~~~~~~~~---~~g~~~----~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRN-----PEAVEALA---EEGATG----ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHH---HCCCee----cCCHHHHHhhcCCCCEEEEEe
Confidence 4899999 9999999999999999999999998 66654332 233332 123443333333456666665
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
..
T Consensus 68 ~~ 69 (301)
T PRK09599 68 PA 69 (301)
T ss_pred cC
Confidence 54
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.004 Score=54.66 Aligned_cols=86 Identities=17% Similarity=0.098 Sum_probs=63.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
.+++|.| .|.+|+.+++.|.++|.+++++..+. . +.....+..++.+|.+|++.++++ +++++.|+.+
T Consensus 241 ~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~----~------~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 241 DHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLG----L------EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CeEEEEC-CChHHHHHHHHHHHCCCCEEEEECch----h------hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 4688999 89999999999999999998887541 1 112246788999999999999886 5689999876
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.... .....++..+++.+
T Consensus 310 t~dD-------~~Nl~ivL~ar~l~ 327 (393)
T PRK10537 310 RDND-------ADNAFVVLAAKEMS 327 (393)
T ss_pred CCCh-------HHHHHHHHHHHHhC
Confidence 6432 12233555666665
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0084 Score=53.98 Aligned_cols=75 Identities=25% Similarity=0.349 Sum_probs=52.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+|.|+| .|..|..+++.|+++||+|++..|+ +++.+.+... ...+..+.. ..+.+++.+.++++|+|+.+
T Consensus 2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~-----~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRT-----YEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEE
Confidence 5899999 9999999999999999999999998 6666433321 112332211 23555555555578988887
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
....
T Consensus 74 v~~~ 77 (470)
T PTZ00142 74 IKAG 77 (470)
T ss_pred eCCh
Confidence 6554
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0021 Score=55.61 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=55.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhh--hc-cCC-Ce-EEEccCCCHHHHHHHhccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLS--FK-EQG-AK-LVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~--l~-~~~-~~-~v~~D~~d~~~l~~~~~~~ 76 (312)
++|+|+|+||++|+++++.|.+++ .++..+.++..... .... .... .. ..+ .. ...-++ +++ .+.++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~ 74 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAG-KRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDV 74 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcC-CcchhhccccccCCCccccceeEEEeC-CHH----HhccC
Confidence 489999999999999999998877 68888854421110 0000 0000 00 000 11 111111 222 34689
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
|+||.+++.. ....+.+++.++| ++.|..|
T Consensus 75 DvVf~a~p~~--------~s~~~~~~~~~~G-~~VIDls 104 (341)
T TIGR00978 75 DIVFSALPSE--------VAEEVEPKLAEAG-KPVFSNA 104 (341)
T ss_pred CEEEEeCCHH--------HHHHHHHHHHHCC-CEEEECC
Confidence 9999988653 2334556677778 6665554
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0021 Score=57.79 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=51.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc------------CCCHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS------------FNDYQS 68 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D------------~~d~~~ 68 (312)
||+|+|+| .|++|..++..|.+.| ++|++++.+ ++|.+. +......+..-+ +.-..+
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~-----~~~v~~---l~~g~~~~~e~gl~ell~~~~~~~l~~t~~ 71 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDIS-----VPRIDA---WNSDQLPIYEPGLDEVVKQCRGKNLFFSTD 71 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECC-----HHHHHH---HHcCCCccCCCCHHHHHHHhhcCCEEEEcC
Confidence 46899998 9999999999999885 789999988 666633 322222221111 111122
Q ss_pred HHHHhccCCEEEEcCCCCc
Q 021470 69 LVNAVKLVDVVICAISGVH 87 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~ 87 (312)
+.++++++|++|.|.+.+.
T Consensus 72 ~~~~i~~advi~I~V~TP~ 90 (473)
T PLN02353 72 VEKHVAEADIVFVSVNTPT 90 (473)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 3456778999999987554
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0058 Score=48.44 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=67.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCC----------------CChHHHHH----hhhhccCCC--eEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIG----------------VDIEKVQM----LLSFKEQGA--KLV 59 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~----------------~~~~~~~~----~~~l~~~~~--~~v 59 (312)
..+|+|+|++| +|..+++.|...| .++++++.+.-. ....|++. ++.+ .+.+ +.+
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~ 96 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIV 96 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence 46899999655 9999999999999 678887654211 00112221 2222 2344 444
Q ss_pred EccCCC-HHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 60 SGSFND-YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 60 ~~D~~d-~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
..++.+ .+...+.++++|+|+.+... ......+-++|++.+ ++.+..++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~-------~~~~~~ln~~c~~~~-ip~i~~~~~G~ 149 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEEN-------YERTAKVNDVCRKHH-IPFISCATYGL 149 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-CCEEEEEeecC
Confidence 444432 45566678899999977543 445566778899988 76665555554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.002 Score=56.33 Aligned_cols=74 Identities=26% Similarity=0.343 Sum_probs=56.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+|+|+| +|.+|...++.|...|.+|++++|+ +++.+.+... .+ ..+..+..+.+.+.+.+.++|+||+++
T Consensus 168 ~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~-----~~~~~~l~~~--~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 168 GDVTIIG-GGVVGTNAAKMANGLGATVTILDIN-----IDRLRQLDAE--FG-GRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred ceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHh--cC-ceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 5799999 5999999999999999999999998 6555332221 11 123445667888999999999999988
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
+..
T Consensus 239 ~~~ 241 (370)
T TIGR00518 239 LIP 241 (370)
T ss_pred ccC
Confidence 543
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0038 Score=56.75 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=72.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHH----HHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEK----VQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~----~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.+|+|+| .|.+|.+++..|+..| .+++++.-+...++..+ .+..+.+ ++++.+...|..+.+++.+.+++.|+
T Consensus 130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~-n~~v~v~~i~~~~~~dl~ev~~~~Di 207 (637)
T TIGR03693 130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEET-DDALLVQEIDFAEDQHLHEAFEPADW 207 (637)
T ss_pred ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHh-CCCCceEeccCCcchhHHHhhcCCcE
Confidence 5899999 8999999999999999 57777743322222221 1222222 45777777787889999999999999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
|++.+.... ......+-++|.+.|
T Consensus 208 Vi~vsDdy~-----~~~Lr~lN~acvkeg 231 (637)
T TIGR03693 208 VLYVSDNGD-----IDDLHALHAFCKEEG 231 (637)
T ss_pred EEEECCCCC-----hHHHHHHHHHHHHcC
Confidence 999987665 566778888888887
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0022 Score=54.74 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=63.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--C-----eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--H-----ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
..||.|+||+|++|+.++..|+..+ . ++..++.+.... ..+... ..+.+...... .+..-.....+.+++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~-~a~g~a-~Dl~~~~~~~~-~~~~i~~~~~~~~~d 79 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMK-ALEGVA-MELEDCAFPLL-AGVVATTDPEEAFKD 79 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCccc-ccchHH-HHHhhcccccc-CCcEEecChHHHhCC
Confidence 4689999999999999999999887 3 788888853211 012211 11111110000 010000122345789
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.++|..... ..|....+.++..++++.
T Consensus 80 aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~ 119 (323)
T TIGR01759 80 VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVA 119 (323)
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999975422 167778889999998886
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00079 Score=56.23 Aligned_cols=69 Identities=26% Similarity=0.298 Sum_probs=47.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|||+|.|+| .|.+|..+++.|.+.| ++|.+++|+ +++.+.+... .++.+. .+ ..++++.+|+
T Consensus 1 ~mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~-----~~~~~~~~~~--~g~~~~----~~---~~~~~~~adv 65 (267)
T PRK11880 1 MMKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPS-----PEKRAALAEE--YGVRAA----TD---NQEAAQEADV 65 (267)
T ss_pred CCCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCC-----HHHHHHHHHh--cCCeec----CC---hHHHHhcCCE
Confidence 247899999 7999999999999998 789999998 5554322211 133221 12 2334568999
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
||.+..+
T Consensus 66 Vil~v~~ 72 (267)
T PRK11880 66 VVLAVKP 72 (267)
T ss_pred EEEEcCH
Confidence 9988754
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0038 Score=46.18 Aligned_cols=100 Identities=21% Similarity=0.344 Sum_probs=65.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCC--------------CChHHHHHhh-hhc--cCC--CeEEEccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIG--------------VDIEKVQMLL-SFK--EQG--AKLVSGSF 63 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~~~~-~l~--~~~--~~~v~~D~ 63 (312)
++|+|.| .|.+|+.+++.|...|. ++++++.+.-. ....|...++ .+. .+. ++.+..++
T Consensus 3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 6899999 89999999999999995 78887654110 0112332221 121 233 44444555
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+.+.+.++++|+||.+... ......+.++|++.+ + .+|.
T Consensus 82 -~~~~~~~~~~~~d~vi~~~d~-------~~~~~~l~~~~~~~~-~-p~i~ 122 (135)
T PF00899_consen 82 -DEENIEELLKDYDIVIDCVDS-------LAARLLLNEICREYG-I-PFID 122 (135)
T ss_dssp -SHHHHHHHHHTSSEEEEESSS-------HHHHHHHHHHHHHTT---EEEE
T ss_pred -ccccccccccCCCEEEEecCC-------HHHHHHHHHHHHHcC-C-CEEE
Confidence 567788888999999998654 444556778899888 5 4554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00089 Score=51.01 Aligned_cols=76 Identities=25% Similarity=0.378 Sum_probs=49.3
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-----CCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-----QGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
||.|+| +|..|.+++..|..+|++|+.++|+ ++..+.+..-.. .++..-. .+.=..++.++++++|+|
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~-----~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~I 73 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRD-----EEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADII 73 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETSC-----HHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEE
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEE
Confidence 689999 8999999999999999999999998 554433322111 1111111 111123567788999999
Q ss_pred EEcCCCCc
Q 021470 80 ICAISGVH 87 (312)
Q Consensus 80 ~~~~~~~~ 87 (312)
+.+.+...
T Consensus 74 iiavPs~~ 81 (157)
T PF01210_consen 74 IIAVPSQA 81 (157)
T ss_dssp EE-S-GGG
T ss_pred EecccHHH
Confidence 98877543
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0034 Score=56.67 Aligned_cols=87 Identities=22% Similarity=0.200 Sum_probs=58.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~~ 81 (312)
.++|+|+|++| +|.++++.|++.|++|.+..++.... .+..+.+...++++..+.. +..+ +. ++|.||.
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~----~~~~~~l~~~g~~~~~~~~--~~~~---~~~~~d~vV~ 74 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSE----NPEAQELLEEGIKVICGSH--PLEL---LDEDFDLMVK 74 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccc----hhHHHHHHhcCCEEEeCCC--CHHH---hcCcCCEEEE
Confidence 47899999877 99999999999999999998764321 1112334455777665432 2222 23 4899999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhC
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.++.... ..++++|++.|
T Consensus 75 s~gi~~~--------~~~~~~a~~~~ 92 (447)
T PRK02472 75 NPGIPYT--------NPMVEKALEKG 92 (447)
T ss_pred CCCCCCC--------CHHHHHHHHCC
Confidence 9886542 24666777666
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0017 Score=57.41 Aligned_cols=73 Identities=30% Similarity=0.404 Sum_probs=54.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| +|..|+.++..|.+.| .++++..|+ +++++.+...-. +.. ....+++.+.+..+|+||+
T Consensus 181 ~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt-----~~ra~~La~~~~-~~~-----~~~~~~l~~~l~~aDiVI~ 248 (414)
T PRK13940 181 SKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRT-----IEKAQKITSAFR-NAS-----AHYLSELPQLIKKADIIIA 248 (414)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHhc-CCe-----EecHHHHHHHhccCCEEEE
Confidence 47899999 6999999999999999 589999998 667644332111 122 2234567788889999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+.+...
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 998866
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0016 Score=54.61 Aligned_cols=73 Identities=25% Similarity=0.381 Sum_probs=50.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+| +|.+|+.++.+|.+.| .+|+++.|+ .++.+.+. .+.... .+..+. +..+.+.++|+||
T Consensus 123 ~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~-----~~~a~~l~~~~~~~~--~~~~~~----~~~~~~~~~DivI 190 (278)
T PRK00258 123 GKRILILG-AGGAARAVILPLLDLGVAEITIVNRT-----VERAEELAKLFGALG--KAELDL----ELQEELADFDLII 190 (278)
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhhhcc--ceeecc----cchhccccCCEEE
Confidence 46899999 5999999999999999 899999998 66664332 222111 011111 2234567899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
++.+...
T Consensus 191 naTp~g~ 197 (278)
T PRK00258 191 NATSAGM 197 (278)
T ss_pred ECCcCCC
Confidence 9987653
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0016 Score=51.67 Aligned_cols=68 Identities=25% Similarity=0.219 Sum_probs=46.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~ 80 (312)
..++|+|+| .|.+|+.+++.|.+.|++|++.+++ +++.+.... ..+.+.+ |. + +++. .+|+++
T Consensus 27 ~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~-----~~~~~~~~~--~~g~~~v--~~---~---~l~~~~~Dv~v 90 (200)
T cd01075 27 EGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADIN-----EEAVARAAE--LFGATVV--AP---E---EIYSVDADVFA 90 (200)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHH--HcCCEEE--cc---h---hhccccCCEEE
Confidence 357999999 6899999999999999999988877 555432221 1134333 21 2 2232 799999
Q ss_pred EcCCC
Q 021470 81 CAISG 85 (312)
Q Consensus 81 ~~~~~ 85 (312)
.++..
T Consensus 91 p~A~~ 95 (200)
T cd01075 91 PCALG 95 (200)
T ss_pred ecccc
Confidence 87753
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0011 Score=55.73 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=50.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+.|+|.++| .|.+|..+++.|++.| ++|+++.|+. +++.+.+.. ..++... .+ ..++.+.+
T Consensus 1 ~~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~----~~~~~~l~~--~~g~~~~----~~---~~e~~~~a 66 (279)
T PRK07679 1 MSIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN----ETRLQELHQ--KYGVKGT----HN---KKELLTDA 66 (279)
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC----HHHHHHHHH--hcCceEe----CC---HHHHHhcC
Confidence 7778999999 9999999999999987 7899888862 223322111 1244322 22 23446689
Q ss_pred CEEEEcCCCCc
Q 021470 77 DVVICAISGVH 87 (312)
Q Consensus 77 d~v~~~~~~~~ 87 (312)
|+||.+..+..
T Consensus 67 DvVilav~p~~ 77 (279)
T PRK07679 67 NILFLAMKPKD 77 (279)
T ss_pred CEEEEEeCHHH
Confidence 99999987654
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0089 Score=44.69 Aligned_cols=104 Identities=23% Similarity=0.325 Sum_probs=65.3
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCC--------------CCCChHHHHHh-hhhc--cCCCe--EEEccCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPE--------------IGVDIEKVQML-LSFK--EQGAK--LVSGSFN 64 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~~~~~~~~~~~-~~l~--~~~~~--~v~~D~~ 64 (312)
+|+|+| .|.+|..+++.|...|. ++++++.+. ++....|.+.+ +.++ .++++ .+..++.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 589999 69999999999999995 788876441 11112233222 1121 22333 4444443
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
+ +...+.+.++|+||.+... ......+.++|++.+ ++.+.....|
T Consensus 80 ~-~~~~~~~~~~diVi~~~d~-------~~~~~~l~~~~~~~~-i~~i~~~~~g 124 (143)
T cd01483 80 E-DNLDDFLDGVDLVIDAIDN-------IAVRRALNRACKELG-IPVIDAGGLG 124 (143)
T ss_pred h-hhHHHHhcCCCEEEECCCC-------HHHHHHHHHHHHHcC-CCEEEEcCCC
Confidence 3 3346677899999998765 345667888999988 5555444433
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0027 Score=57.28 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=65.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+++|.++| .|..|+.+++.|+++|++|.+..|+ ++|.+.+... ...++..+. -..+++++.+.++++|+||.
T Consensus 6 ~~~IG~IG-LG~MG~~mA~nL~~~G~~V~V~NRt-----~~k~~~l~~~~~~~Ga~~~~-~a~s~~e~v~~l~~~dvIi~ 78 (493)
T PLN02350 6 LSRIGLAG-LAVMGQNLALNIAEKGFPISVYNRT-----TSKVDETVERAKKEGNLPLY-GFKDPEDFVLSIQKPRSVII 78 (493)
T ss_pred CCCEEEEe-eHHHHHHHHHHHHhCCCeEEEECCC-----HHHHHHHHHhhhhcCCcccc-cCCCHHHHHhcCCCCCEEEE
Confidence 57899999 9999999999999999999999998 6666433321 111322111 12355555555556787777
Q ss_pred cCCCCccc---------------------cchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIR---------------------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~---------------------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+......- ......+..+.+.+++.| + +|+
T Consensus 79 ~v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~G-i-~fl 129 (493)
T PLN02350 79 LVKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKG-L-LYL 129 (493)
T ss_pred ECCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC-C-eEE
Confidence 66543310 022455677777777777 4 454
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0099 Score=51.38 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=61.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+||.|+|+ |.+|+.++..|+..+ .++..++.+.........+..+...- ... .+.++ .|.+ .++++|+|+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~----~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYA----VTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHH----HhCCCCEEE
Confidence 59999995 999999999999887 48999988743221111111111100 122 22221 2333 278999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
.+++..... ..|....+.+++.+++++
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~ 145 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYS 145 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999975422 156677788888888876
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0011 Score=59.26 Aligned_cols=69 Identities=33% Similarity=0.375 Sum_probs=48.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|+||+|.+|..+++.|.+.|++|++++|+ +++.... ....++.. ..+..+++.++|+||.++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~-----~~~~~~~--a~~~gv~~-------~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRD-----PKKGKEV--AKELGVEY-------ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECC-----hHHHHHH--HHHcCCee-------ccCHHHHhccCCEEEEec
Confidence 489999999999999999999999999999998 4442111 11123321 112344567889999888
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
+..
T Consensus 67 p~~ 69 (437)
T PRK08655 67 PIN 69 (437)
T ss_pred CHH
Confidence 653
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0062 Score=51.25 Aligned_cols=94 Identities=21% Similarity=0.269 Sum_probs=62.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccC----CC-eEEEccCCCHHHHHHHhccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQ----GA-KLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~----~~-~~v~~D~~d~~~l~~~~~~~ 76 (312)
+||.|+|| |++|+.++-.|+.++ .++..++...... .-.+ .+|.+. +. ..+.+| .+ -+.++++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~-~G~a---~DL~~~~~~~~~~~~i~~~-~~----y~~~~~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKA-EGVA---LDLSHAAAPLGSDVKITGD-GD----YEDLKGA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccc-cchh---cchhhcchhccCceEEecC-CC----hhhhcCC
Confidence 58999998 999999999998776 4899998873322 1111 112111 11 122222 22 2347899
Q ss_pred CEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 77 DVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 77 d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
|+|+.++|...-+ ..|....+.+.+...+.+
T Consensus 71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~ 109 (313)
T COG0039 71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA 109 (313)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC
Confidence 9999999876532 267778888888888877
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0023 Score=56.11 Aligned_cols=68 Identities=24% Similarity=0.349 Sum_probs=53.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|++|+|+| +|.+|+-++.++.+.|++|++++.+.... .. .+ --+.+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG-~Gql~~ml~~aa~~lG~~v~~~d~~~~~p--a~-----~~---ad~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIG-GGQLGRMLALAAAPLGYKVIVLDPDPDSP--AA-----QV---ADEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCc--hh-----Hh---CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 47899999 58999999999999999999998764432 11 11 224567899999999999999998753
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0031 Score=53.92 Aligned_cols=80 Identities=20% Similarity=0.208 Sum_probs=50.3
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-----h---ccCCCe-EEEccCCCHHHHH
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-----F---KEQGAK-LVSGSFNDYQSLV 70 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----l---~~~~~~-~v~~D~~d~~~l~ 70 (312)
|+ +++|.|+| .|.+|..++..|++.|++|+++.++ +++.+.... + ...+.. .....+.-..+..
T Consensus 1 ~~~~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 74 (311)
T PRK06130 1 MNPIQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVM-----EGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLA 74 (311)
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHH
Confidence 55 47899999 7999999999999999999999987 444322211 0 000100 0000011112344
Q ss_pred HHhccCCEEEEcCCCC
Q 021470 71 NAVKLVDVVICAISGV 86 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~ 86 (312)
++++++|+||.+....
T Consensus 75 ~~~~~aDlVi~av~~~ 90 (311)
T PRK06130 75 AAVSGADLVIEAVPEK 90 (311)
T ss_pred HHhccCCEEEEeccCc
Confidence 5677899999988654
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0036 Score=53.18 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=60.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhcc---CCC-eEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKE---QGA-KLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~---~~~-~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+|.|+| +|.+|..++..|+..|+ +|++++..... .+....+.... ... ..+.. -.| +.+ ++++|+
T Consensus 2 ~KV~VIG-aG~vG~~iA~~la~~g~~~VvlvDi~~~l---~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~-~~~aDi 72 (305)
T TIGR01763 2 KKISVIG-AGFVGATTAFRLAEKELADLVLLDVVEGI---PQGKALDMYEASPVGGFDTKVTG-TNN---YAD-TANSDI 72 (305)
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCCCh---hHHHHHhhhhhhhccCCCcEEEe-cCC---HHH-hCCCCE
Confidence 5899999 59999999999999886 89999885332 12211111111 011 11221 123 333 578999
Q ss_pred EEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
||.+++.....+ .|....+.+++.+.+++
T Consensus 73 VIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~ 109 (305)
T TIGR01763 73 VVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHS 109 (305)
T ss_pred EEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999654321 57777888888887775
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0015 Score=54.87 Aligned_cols=68 Identities=28% Similarity=0.359 Sum_probs=47.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..++..|.+.|++|++++|+ +++.+.... .+. +.....+. +.++++|+||.+.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~-----~~~~~~a~~---~g~--~~~~~~~~----~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRR-----ESTCERAIE---RGL--VDEASTDL----SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH---CCC--cccccCCH----hHhcCCCEEEEcC
Confidence 4799999 8999999999999999999999997 544432222 222 11111122 2457899999998
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
...
T Consensus 66 p~~ 68 (279)
T PRK07417 66 PIG 68 (279)
T ss_pred CHH
Confidence 753
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0034 Score=52.25 Aligned_cols=96 Identities=19% Similarity=0.119 Sum_probs=62.6
Q ss_pred EEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccC--CCeEEEccCCCHHHHHHHhccCCEE
Q 021470 6 VLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQ--GAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~--~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|.|+||+|.+|..++..|+..| .+|..++++...... ....++.+... ..++. . .+++.++++++|+|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~-~~~dl~~~~~~~~~~~i~---~--~~d~~~~~~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG-VAMDLQDAVEPLADIKVS---I--TDDPYEAFKDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH-HHHHHHHhhhhccCcEEE---E--CCchHHHhCCCCEE
Confidence 5799998999999999999888 799999887543311 11112222111 11111 1 22345668899999
Q ss_pred EEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
+.+++...... .|....+.+++.+++..
T Consensus 75 v~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~ 110 (263)
T cd00650 75 IITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYS 110 (263)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99998754321 45666777888887765
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0029 Score=53.20 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=52.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++++|+| +|..|++++.+|.+.| .+|+++.|+ ++|++.+...-.....+.. +...+++...+.++|+||+
T Consensus 125 ~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt-----~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIn 196 (282)
T TIGR01809 125 GFRGLVIG-AGGTSRAAVYALASLGVTDITVINRN-----PDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVS 196 (282)
T ss_pred CceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCC-----HHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEE
Confidence 46899999 7999999999999999 589999998 7777544321111111111 2222344555678999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+.+...
T Consensus 197 aTp~g~ 202 (282)
T TIGR01809 197 TVPADV 202 (282)
T ss_pred CCCCCC
Confidence 988654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.003 Score=53.79 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=51.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|..-|.+|+++.|.... ..++... ...+++.++++++|+|+.+
T Consensus 136 g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~-------------~~~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 136 DFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKS-------------WPGVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCC-------------CCCceee----cccccHHHHHhcCCEEEEC
Confidence 47899999 9999999999999999999999886321 1122211 1345788999999999998
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 198 lPlt~ 202 (312)
T PRK15469 198 LPNTP 202 (312)
T ss_pred CCCCH
Confidence 88754
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0026 Score=52.96 Aligned_cols=68 Identities=32% Similarity=0.373 Sum_probs=43.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL--GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
||+|.|+| .|.+|+.+++.|.+. +.++.++ +|+ +++.+.+.. ..+... +.+ +.+++.++|+|
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~-----~~~a~~~a~--~~~~~~----~~~---~~ell~~~DvV 65 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRN-----LEKAENLAS--KTGAKA----CLS---IDELVEDVDLV 65 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCC-----HHHHHHHHH--hcCCee----ECC---HHHHhcCCCEE
Confidence 36999999 799999999999886 3565554 444 445432211 112211 223 34444789999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
+.+++.
T Consensus 66 vi~a~~ 71 (265)
T PRK13304 66 VECASV 71 (265)
T ss_pred EEcCCh
Confidence 998754
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.01 Score=52.74 Aligned_cols=99 Identities=11% Similarity=0.044 Sum_probs=63.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-------C--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-------G--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-------g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
-+|.|+|++|++|.+++..|+.. + .++..++++.....-+..+..+......-++... ..+++ .++
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~ye----~~k 175 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDPYE----VFQ 175 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCCHH----HhC
Confidence 48999999999999999999887 6 3788888874433111111111110101121111 12333 477
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHH-hC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKE-AG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~-~~ 107 (312)
++|+||.+++..... ..|....+.+.....+ ++
T Consensus 176 daDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~ 217 (444)
T PLN00112 176 DAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVAS 217 (444)
T ss_pred cCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999975422 2678888889999888 45
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0014 Score=55.53 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=48.7
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAIS 84 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~ 84 (312)
+|.|+| .|.+|..+++.|++.|++|+++.|+ +++.+.+. ..+... .++..++++++|+||.+.+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~-------~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIG-----PEVADELL---AAGAVT-------AETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHH---HCCCcc-------cCCHHHHHhcCCEEEEecC
Confidence 488998 8999999999999999999999998 66653322 223321 1234566778999999887
Q ss_pred C
Q 021470 85 G 85 (312)
Q Consensus 85 ~ 85 (312)
.
T Consensus 65 ~ 65 (291)
T TIGR01505 65 D 65 (291)
T ss_pred C
Confidence 5
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0034 Score=57.21 Aligned_cols=78 Identities=22% Similarity=0.186 Sum_probs=50.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--------cc-CCCeE-EEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--------KE-QGAKL-VSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--------~~-~~~~~-v~~D~~d~~~l~~~ 72 (312)
.|+|.|+| +|.+|..++..|+..|++|++++++ +++.+.+... .. ..... ..+.+.-.+++.++
T Consensus 4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea 77 (495)
T PRK07531 4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPH-----PEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEA 77 (495)
T ss_pred cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHH
Confidence 36899998 9999999999999999999999998 5554322110 00 00000 00111112346677
Q ss_pred hccCCEEEEcCCCC
Q 021470 73 VKLVDVVICAISGV 86 (312)
Q Consensus 73 ~~~~d~v~~~~~~~ 86 (312)
++++|+|+-+....
T Consensus 78 ~~~aD~Vieavpe~ 91 (495)
T PRK07531 78 VAGADWIQESVPER 91 (495)
T ss_pred hcCCCEEEEcCcCC
Confidence 88999999887654
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0024 Score=56.80 Aligned_cols=78 Identities=29% Similarity=0.393 Sum_probs=49.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc----cCCCe-----EE-EccCCCHHHHHHHh
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK----EQGAK-----LV-SGSFNDYQSLVNAV 73 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~----~~~~~-----~v-~~D~~d~~~l~~~~ 73 (312)
|+|.|+| .|++|..++..|.+.||+|+++.++ +++.+.+..-. .++++ .+ .+.+.-..+..+++
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~-----~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~ 74 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDID-----QEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAI 74 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECC-----HHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHH
Confidence 4799999 9999999999999999999999998 55553322100 00000 00 00011112344566
Q ss_pred ccCCEEEEcCCCCc
Q 021470 74 KLVDVVICAISGVH 87 (312)
Q Consensus 74 ~~~d~v~~~~~~~~ 87 (312)
+++|+||.+.+...
T Consensus 75 ~~advvii~vpt~~ 88 (411)
T TIGR03026 75 RDADVIIICVPTPL 88 (411)
T ss_pred hhCCEEEEEeCCCC
Confidence 78999999888653
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0071 Score=49.15 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=65.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCC--------------CCChHHHHHh-hhhc--cC--CCeEEEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEI--------------GVDIEKVQML-LSFK--EQ--GAKLVSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~--------------~~~~~~~~~~-~~l~--~~--~~~~v~~D 62 (312)
..+|+|+| .|.+|.++++.|...| .++++++.+.- +....|++.+ +.+. .+ +++.+..+
T Consensus 21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~ 99 (228)
T cd00757 21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER 99 (228)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence 46899999 8999999999999999 47776643310 0112233221 2222 22 34444444
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+ +.+.+.+.++++|+||.+.... ..-..+-++|.+.+ ++.+..+
T Consensus 100 i-~~~~~~~~~~~~DvVi~~~d~~-------~~r~~l~~~~~~~~-ip~i~~g 143 (228)
T cd00757 100 L-DAENAEELIAGYDLVLDCTDNF-------ATRYLINDACVKLG-KPLVSGA 143 (228)
T ss_pred e-CHHHHHHHHhCCCEEEEcCCCH-------HHHHHHHHHHHHcC-CCEEEEE
Confidence 4 4567778888999999987643 33456778888887 5544433
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0072 Score=48.02 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=54.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| +|.+|...++.|++.|.+|+++++... ++-. +......+.+..-++.. ..+.++|.||.+
T Consensus 10 ~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~---~~l~---~l~~~~~i~~~~~~~~~-----~~l~~adlViaa 77 (202)
T PRK06718 10 NKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELT---ENLV---KLVEEGKIRWKQKEFEP-----SDIVDAFLVIAA 77 (202)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCC---HHHH---HHHhCCCEEEEecCCCh-----hhcCCceEEEEc
Confidence 57999999 699999999999999999999976521 1111 11222345555544432 235789988887
Q ss_pred CCCCccccchhHhHHHHHHHHH
Q 021470 83 ISGVHIRSHQILLQLKLVDAIK 104 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~ 104 (312)
.+... ....+.+.|+
T Consensus 78 T~d~e-------lN~~i~~~a~ 92 (202)
T PRK06718 78 TNDPR-------VNEQVKEDLP 92 (202)
T ss_pred CCCHH-------HHHHHHHHHH
Confidence 66532 2345566663
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0035 Score=52.71 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=51.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+|.|.||+|+.|..+++.|..+. .++..++.+.. .+..+ ..++++++|++|.+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------------~~~~~---~~~~~~~~D~vFla 56 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------------KDAAE---RAKLLNAADVAILC 56 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------------cCcCC---HhHhhcCCCEEEEC
Confidence 489999999999999999999886 47776654310 11112 33455789999998
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
++.. ....++..+.+.| + ++|
T Consensus 57 lp~~--------~s~~~~~~~~~~g-~-~VI 77 (310)
T TIGR01851 57 LPDD--------AAREAVSLVDNPN-T-CII 77 (310)
T ss_pred CCHH--------HHHHHHHHHHhCC-C-EEE
Confidence 8643 3445666666666 4 455
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0014 Score=56.02 Aligned_cols=54 Identities=30% Similarity=0.370 Sum_probs=43.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.|+|.|+| +|.+|..+++.|.+.||+|+++.|+.. .++.++++++|+||.+
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------------~~~~~~~~~advvi~~ 54 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------------LSLAAVLADADVIVSA 54 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------------CCHHHHHhcCCEEEEE
Confidence 47899999 999999999999999999999998721 1234556678888887
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 55 vp~ 57 (308)
T PRK14619 55 VSM 57 (308)
T ss_pred CCh
Confidence 764
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0059 Score=46.06 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=47.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+| -|.+|+.+++.|...|-+|++...+ |.++-+ .. ..+.++. .+.+++..+|++|.+
T Consensus 23 Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~D-----Pi~alq--A~-~dGf~v~--------~~~~a~~~adi~vta 85 (162)
T PF00670_consen 23 GKRVVVIG-YGKVGKGIARALRGLGARVTVTEID-----PIRALQ--AA-MDGFEVM--------TLEEALRDADIFVTA 85 (162)
T ss_dssp TSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SS-----HHHHHH--HH-HTT-EEE---------HHHHTTT-SEEEE-
T ss_pred CCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECC-----hHHHHH--hh-hcCcEec--------CHHHHHhhCCEEEEC
Confidence 47899999 9999999999999999999999998 766522 11 3566554 266778899999998
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 86 TG~~~ 90 (162)
T PF00670_consen 86 TGNKD 90 (162)
T ss_dssp SSSSS
T ss_pred CCCcc
Confidence 88754
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0045 Score=53.34 Aligned_cols=89 Identities=17% Similarity=0.255 Sum_probs=55.4
Q ss_pred cEEEEEcCCchhhHHHHHHHH-hCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASL-ALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~-~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++|+|+||||.+|+.+++.|. ++.+ +++.++...+.. +.....+.....-++.+.+ .+.++|++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g--------~~~~f~~~~~~v~~~~~~~----~~~~vDiv 68 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQ--------AAPSFGGTTGTLQDAFDID----ALKALDII 68 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCC--------CcCCCCCCcceEEcCcccc----cccCCCEE
Confidence 479999999999999999998 5554 445554432211 1111112222223333322 35789999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCc-eee
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVK-RFL 113 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~-~~v 113 (312)
|.+++. ...+.+...++++| .. .+|
T Consensus 69 ffa~g~--------~~s~~~~p~~~~aG-~~~~VI 94 (366)
T TIGR01745 69 ITCQGG--------DYTNEIYPKLRESG-WQGYWI 94 (366)
T ss_pred EEcCCH--------HHHHHHHHHHHhCC-CCeEEE
Confidence 999864 34677888888888 54 444
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0065 Score=46.17 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=52.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|.+.++.|++.|++|++++... .+.+..+ ..+++....+.. ++ ++++|.||-+
T Consensus 13 ~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~-------~~~l~~l--~~i~~~~~~~~~-~d----l~~a~lViaa 77 (157)
T PRK06719 13 NKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEI-------CKEMKEL--PYITWKQKTFSN-DD----IKDAHLIYAA 77 (157)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCcc-------CHHHHhc--cCcEEEecccCh-hc----CCCceEEEEC
Confidence 47899999 89999999999999999999985331 1111222 244554444432 22 5678888877
Q ss_pred CCCCccccchhHhHHHHHHHHHHh
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEA 106 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~ 106 (312)
..... ....+...|++.
T Consensus 78 T~d~e-------~N~~i~~~a~~~ 94 (157)
T PRK06719 78 TNQHA-------VNMMVKQAAHDF 94 (157)
T ss_pred CCCHH-------HHHHHHHHHHHC
Confidence 64432 234455566553
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0075 Score=51.38 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=61.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccC-----CCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQ-----GAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~l~~~~~~ 75 (312)
.+||.|+|+ |.+|+.++..|+..| .++..++.+.... +... .++.+. ...+... .|++ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~---~g~a-~Dl~~~~~~~~~~~v~~~--~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKL---KGEA-MDLQHGSAFLKNPKIEAD--KDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHH---HHHH-HHHHHhhccCCCCEEEEC--CCHH----HhCC
Confidence 469999995 999999999998887 5899998874322 1111 112111 1222221 2333 2789
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++..... ..|....+.+.+.+++++
T Consensus 72 adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~ 111 (312)
T cd05293 72 SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYS 111 (312)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999875421 256667788888888876
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0038 Score=52.48 Aligned_cols=84 Identities=12% Similarity=0.025 Sum_probs=53.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECC-CCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRP-EIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~-~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|..++|+| ||||-+|+.+.+.|-++++ +++.+... .+.. +.+.-.+-++..-++++. .|+++
T Consensus 1 ~~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~g--------k~i~f~g~~~~V~~l~~~-----~f~~v 66 (322)
T PRK06901 1 MATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEE--------QGIRFNNKAVEQIAPEEV-----EWADF 66 (322)
T ss_pred CCcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCC--------CEEEECCEEEEEEECCcc-----CcccC
Confidence 66789999 9999999999999999885 44454332 1111 112222323333344332 26789
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
|++|. ++.. ..+.....+.++|
T Consensus 67 Dia~f-ag~~--------~s~~~ap~a~~aG 88 (322)
T PRK06901 67 NYVFF-AGKM--------AQAEHLAQAAEAG 88 (322)
T ss_pred CEEEE-cCHH--------HHHHHHHHHHHCC
Confidence 99998 6542 4567777777888
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0087 Score=50.39 Aligned_cols=35 Identities=20% Similarity=0.399 Sum_probs=33.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|++++|.|+| .|.+|..++..|+..|++|+++.++
T Consensus 1 ~~~~kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~ 35 (282)
T PRK05808 1 MGIQKIGVIG-AGTMGNGIAQVCAVAGYDVVMVDIS 35 (282)
T ss_pred CCccEEEEEc-cCHHHHHHHHHHHHCCCceEEEeCC
Confidence 7778999999 7999999999999999999999988
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00062 Score=57.53 Aligned_cols=78 Identities=22% Similarity=0.283 Sum_probs=50.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh----hccCCCeE---EE-------ccCCCHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS----FKEQGAKL---VS-------GSFNDYQS 68 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----l~~~~~~~---v~-------~D~~d~~~ 68 (312)
+++|.|+| .|.+|..++..|++.|++|++++++ +++.+.... +...+++. .. ..+.-.++
T Consensus 1 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 1 IEKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDIK-----QEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 36899999 6999999999999999999999998 544432211 00011000 00 00111134
Q ss_pred HHHHhccCCEEEEcCCCC
Q 021470 69 LVNAVKLVDVVICAISGV 86 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~ 86 (312)
+.++++++|+||.+.+..
T Consensus 75 ~~~~~~~aD~Vi~avpe~ 92 (288)
T PRK09260 75 LKAAVADADLVIEAVPEK 92 (288)
T ss_pred HHHhhcCCCEEEEeccCC
Confidence 566788999999988743
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0028 Score=54.07 Aligned_cols=70 Identities=30% Similarity=0.272 Sum_probs=48.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+| .|.+|..++..|.+.|+ +|++++|+ +++.+... ..++.... .. +..++++++|+||
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~-----~~~~~~a~---~~g~~~~~--~~---~~~~~~~~aDvVi 71 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRS-----AETRARAR---ELGLGDRV--TT---SAAEAVKGADLVI 71 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECC-----HHHHHHHH---hCCCCcee--cC---CHHHHhcCCCEEE
Confidence 57899999 99999999999999984 89999998 55543322 22321111 11 2344567899999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+++..
T Consensus 72 iavp~~ 77 (307)
T PRK07502 72 LCVPVG 77 (307)
T ss_pred ECCCHH
Confidence 998754
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0037 Score=53.36 Aligned_cols=71 Identities=32% Similarity=0.457 Sum_probs=52.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+| +|.+|..+++.|.+.| .+|+++.|+ +++...+ +.+ +...+ +.+++.+++..+|+||
T Consensus 178 ~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~-----~~ra~~la~~~---g~~~~-----~~~~~~~~l~~aDvVi 243 (311)
T cd05213 178 GKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRT-----YERAEELAKEL---GGNAV-----PLDELLELLNEADVVI 243 (311)
T ss_pred CCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHc---CCeEE-----eHHHHHHHHhcCCEEE
Confidence 47899999 5999999999999876 789999998 6665322 222 23222 3345777788899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+++...
T Consensus 244 ~at~~~~ 250 (311)
T cd05213 244 SATGAPH 250 (311)
T ss_pred ECCCCCc
Confidence 9998765
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0077 Score=50.16 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=67.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCCeE--EEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGAKL--VSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~~~--v~~D 62 (312)
..+|+|+| .|.+|..++..|...| -++++++.+.-+. ...|.+.. +.+. .+.+++ +...
T Consensus 27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~ 105 (287)
T PRK08223 27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEG 105 (287)
T ss_pred cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 36899999 8999999999999999 5777776541111 01233221 2222 234444 4444
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
+ +++...+.++++|+|+.+..... ...-..+-++|++.+ ++.+.-+..|
T Consensus 106 l-~~~n~~~ll~~~DlVvD~~D~~~-----~~~r~~ln~~c~~~~-iP~V~~~~~g 154 (287)
T PRK08223 106 I-GKENADAFLDGVDVYVDGLDFFE-----FDARRLVFAACQQRG-IPALTAAPLG 154 (287)
T ss_pred c-CccCHHHHHhCCCEEEECCCCCc-----HHHHHHHHHHHHHcC-CCEEEEeccC
Confidence 4 34567778899999997664321 344556778899888 6555445444
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0031 Score=52.68 Aligned_cols=72 Identities=25% Similarity=0.364 Sum_probs=48.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++++|+|+ |.+|+.++..|.+.|.+|+++.|+ +++.+.+ +.+...+. ....++.+ ..+.++|+||+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~-----~~~~~~la~~~~~~~~-~~~~~~~~-----~~~~~~DivIn 184 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRT-----VSKAEELAERFQRYGE-IQAFSMDE-----LPLHRVDLIIN 184 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhcCc-eEEechhh-----hcccCccEEEE
Confidence 368999996 899999999999999999999998 5555332 22222121 11112111 12357999999
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
+++..
T Consensus 185 atp~g 189 (270)
T TIGR00507 185 ATSAG 189 (270)
T ss_pred CCCCC
Confidence 99864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0036 Score=52.47 Aligned_cols=76 Identities=21% Similarity=0.274 Sum_probs=50.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhh-hcc-CCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLS-FKE-QGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++++|+| +|..|++++..|.+.| .+|+++.|+ ++|++.+.. +.. .+...+.. .+...+...+..+|+|
T Consensus 127 ~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~-----~~ka~~La~~~~~~~~~~~~~~--~~~~~~~~~~~~~div 198 (283)
T PRK14027 127 LDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVG--VDARGIEDVIAAADGV 198 (283)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCC-----HHHHHHHHHHHhhccCcceEEe--cCHhHHHHHHhhcCEE
Confidence 36899999 6999999999999999 589999998 777754432 211 11111111 2223334445679999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
+|+.+..
T Consensus 199 INaTp~G 205 (283)
T PRK14027 199 VNATPMG 205 (283)
T ss_pred EEcCCCC
Confidence 9998754
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=53.08 Aligned_cols=65 Identities=23% Similarity=0.328 Sum_probs=47.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC----eEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH----ETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+|.++| .|.+|..+++.|++.|+ +|+++ .|+ +++.+. +...++... .+ ..++++++|+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~-----~~~~~~---~~~~g~~~~----~~---~~e~~~~aDv 64 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSN-----PARRDV---FQSLGVKTA----AS---NTEVVKSSDV 64 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCC-----HHHHHH---HHHcCCEEe----CC---hHHHHhcCCE
Confidence 5799999 99999999999999998 88888 776 555533 223355432 22 2344568999
Q ss_pred EEEcCC
Q 021470 79 VICAIS 84 (312)
Q Consensus 79 v~~~~~ 84 (312)
||.+..
T Consensus 65 Vil~v~ 70 (266)
T PLN02688 65 IILAVK 70 (266)
T ss_pred EEEEEC
Confidence 999984
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0049 Score=51.94 Aligned_cols=78 Identities=23% Similarity=0.318 Sum_probs=56.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE-----ccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS-----GSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~-----~D~~d~~~l~~~~~~~d 77 (312)
+++|.|+| +|.=|.+|+..|.++||+|+...|+ ++.......- ..+..+.. .++.-..++.++++++|
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~-----~~~~~~i~~~-~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad 73 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGRD-----EEIVAEINET-RENPKYLPGILLPPNLKATTDLAEALDGAD 73 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCCeeEEEecC-----HHHHHHHHhc-CcCccccCCccCCcccccccCHHHHHhcCC
Confidence 47999999 7888999999999999999999998 5544322221 12333332 12233467888999999
Q ss_pred EEEEcCCCCc
Q 021470 78 VVICAISGVH 87 (312)
Q Consensus 78 ~v~~~~~~~~ 87 (312)
.|+...+...
T Consensus 74 ~iv~avPs~~ 83 (329)
T COG0240 74 IIVIAVPSQA 83 (329)
T ss_pred EEEEECChHH
Confidence 9998877543
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0034 Score=48.18 Aligned_cols=56 Identities=27% Similarity=0.364 Sum_probs=45.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|+++.+|..+++.|.+.|.+|+++.|+. +.+.+.+..+|+||.+
T Consensus 44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhhCCEEEEc
Confidence 47999999765679999999999998899888861 2456677889999998
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 95 t~~~~ 99 (168)
T cd01080 95 VGKPG 99 (168)
T ss_pred CCCCc
Confidence 88754
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0038 Score=54.50 Aligned_cols=71 Identities=30% Similarity=0.468 Sum_probs=58.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+| .|-+|.-++++|.+.| .+|++..|+ .+|++.+. .+ + +.+...+.+...+..+|+||
T Consensus 178 ~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT-----~erA~~La~~~---~-----~~~~~l~el~~~l~~~DvVi 243 (414)
T COG0373 178 DKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRT-----LERAEELAKKL---G-----AEAVALEELLEALAEADVVI 243 (414)
T ss_pred cCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCC-----HHHHHHHHHHh---C-----CeeecHHHHHHhhhhCCEEE
Confidence 46899999 8999999999999999 799999998 77875332 22 2 55556778888899999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+.+...
T Consensus 244 ssTsa~~ 250 (414)
T COG0373 244 SSTSAPH 250 (414)
T ss_pred EecCCCc
Confidence 9988765
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0049 Score=52.49 Aligned_cols=74 Identities=23% Similarity=0.339 Sum_probs=47.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC----CCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF----NDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~----~d~~~l~~~~~~~d~v 79 (312)
|+|+|+| +|.+|..++..|.+.|++|++++|+ +++.+. +...+..+-.++. ...++...+ +.+|+|
T Consensus 1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v 70 (304)
T PRK06522 1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARR-----GAHLDA---LNENGLRLEDGEITVPVLAADDPAEL-GPQDLV 70 (304)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----hHHHHH---HHHcCCcccCCceeecccCCCChhHc-CCCCEE
Confidence 4799999 6999999999999999999999996 333322 2122322101110 011122233 689999
Q ss_pred EEcCCCCc
Q 021470 80 ICAISGVH 87 (312)
Q Consensus 80 ~~~~~~~~ 87 (312)
|.+.....
T Consensus 71 ila~k~~~ 78 (304)
T PRK06522 71 ILAVKAYQ 78 (304)
T ss_pred EEeccccc
Confidence 99887543
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0047 Score=55.14 Aligned_cols=71 Identities=30% Similarity=0.436 Sum_probs=52.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+| +|.+|..+++.|...|. +|+++.|+ +++...+ ..+ +.. ..+.+++.+.+.++|+||
T Consensus 182 ~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~-----~~ra~~la~~~---g~~-----~~~~~~~~~~l~~aDvVI 247 (423)
T PRK00045 182 GKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRT-----LERAEELAEEF---GGE-----AIPLDELPEALAEADIVI 247 (423)
T ss_pred CCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHHHc---CCc-----EeeHHHHHHHhccCCEEE
Confidence 46899999 69999999999999995 89999998 6665422 222 222 223356677788999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+++...
T Consensus 248 ~aT~s~~ 254 (423)
T PRK00045 248 SSTGAPH 254 (423)
T ss_pred ECCCCCC
Confidence 9987654
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0083 Score=51.13 Aligned_cols=91 Identities=20% Similarity=0.315 Sum_probs=60.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-HhhhhccC-----CCeEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFKEQ-----GAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~~~-----~~~~v~~D~~d~~~l~~~~~~ 75 (312)
|+|.|+|+ |.+|..++..|+..| .+|.+++++. ++.. ....+... ... +.. .|. +.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~-----~~~~g~a~dl~~~~~~~~~~~-i~~--~d~----~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINK-----AKAEGEAMDLAHGTPFVKPVR-IYA--GDY----ADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCc-----hhhhhHHHHHHccccccCCeE-Eee--CCH----HHhCC
Confidence 47999995 999999999999999 6899999973 3222 11112111 111 111 233 24789
Q ss_pred CCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++...... .|....+.+++.+++.+
T Consensus 68 aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~ 107 (308)
T cd05292 68 ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA 107 (308)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999754221 46666777777777765
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0028 Score=54.98 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+ |+|+|+| +|.+|..++..|.+.|++|++++|+
T Consensus 1 ~~-mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 1 MM-ARICVLG-AGSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CC-ceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecH
Confidence 54 7899999 9999999999999999999999986
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0028 Score=53.29 Aligned_cols=72 Identities=19% Similarity=0.267 Sum_probs=49.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhh-hhccC--CCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLL-SFKEQ--GAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~--~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++|+|+| +|..|++++..|.+.|. +|+++.|+ .+|++.+. .+... ...+. .. +++.+.+.++|+
T Consensus 127 ~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~-----~~ka~~la~~l~~~~~~~~~~--~~---~~~~~~~~~aDi 195 (284)
T PRK12549 127 LERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVD-----PARAAALADELNARFPAARAT--AG---SDLAAALAAADG 195 (284)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHHHHhhCCCeEEE--ec---cchHhhhCCCCE
Confidence 36899999 78899999999999995 89999998 66665432 22211 12221 11 234455678999
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
||++.+.
T Consensus 196 VInaTp~ 202 (284)
T PRK12549 196 LVHATPT 202 (284)
T ss_pred EEECCcC
Confidence 9999654
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0071 Score=42.39 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=55.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|.+=++.|++.|.+|++++.. .+.. ...+++..-++ .+.+++++.||.+
T Consensus 7 ~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~-----~~~~-------~~~i~~~~~~~------~~~l~~~~lV~~a 67 (103)
T PF13241_consen 7 GKRVLVVG-GGPVAARKARLLLEAGAKVTVISPE-----IEFS-------EGLIQLIRREF------EEDLDGADLVFAA 67 (103)
T ss_dssp T-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESS-----EHHH-------HTSCEEEESS-------GGGCTTESEEEE-
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCc-----hhhh-------hhHHHHHhhhH------HHHHhhheEEEec
Confidence 57899999 6999999999999999999999887 2111 24555655544 2337789988866
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+. ......+.+.|++.+
T Consensus 68 t~d-------~~~n~~i~~~a~~~~ 85 (103)
T PF13241_consen 68 TDD-------PELNEAIYADARARG 85 (103)
T ss_dssp SS--------HHHHHHHHHHHHHTT
T ss_pred CCC-------HHHHHHHHHHHhhCC
Confidence 554 334567888888777
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.004 Score=45.19 Aligned_cols=75 Identities=24% Similarity=0.259 Sum_probs=44.3
Q ss_pred EEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHHHHHhccCCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
++.|+|++|.+|..+++.|.+. ++++.++..+..+. ..+. ... ..++. .+..++ +.+.+. ..++|+||.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~-~~~~---~~~-~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~ 72 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSA-GKRV---SEA-GPHLKGEVVLEL-EPEDFE--ELAVDIVFLA 72 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhc-CcCH---HHH-Cccccccccccc-ccCChh--hcCCCEEEEc
Confidence 5889999999999999999985 68888883322111 1111 111 12221 112222 223333 2489999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 73 ~~~~~ 77 (122)
T smart00859 73 LPHGV 77 (122)
T ss_pred CCcHH
Confidence 87653
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0045 Score=52.62 Aligned_cols=68 Identities=22% Similarity=0.337 Sum_probs=54.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|++|.|+| .|++|+=++.+-...|++|++++-+.++. .. .-.-..+..+++|+++++++.++||+|=.
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~P--A~--------~va~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAP--AA--------QVADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCc--hh--------hcccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 47999999 89999999999999999999998765442 11 12235677888899999999999999843
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.026 Score=48.39 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=61.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.+||.|+|| |.+|+.++..|...| .++..++++.........+........+.. .+.+ ..| ++ +++++|+|+
T Consensus 5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~~ADiVV 78 (319)
T PTZ00117 5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIKDSDVVV 78 (319)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhCCCCEEE
Confidence 468999996 999999999998888 688888887433211111110000001111 1221 123 33 578999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
.+++..... ..|....+.+++.+.+..
T Consensus 79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~ 113 (319)
T PTZ00117 79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC 113 (319)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999765422 145666778888888776
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0067 Score=55.21 Aligned_cols=75 Identities=27% Similarity=0.389 Sum_probs=54.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| +|.+|+.+++.|...|. +|+++.|+ +++.+.+...- .+..+.. ...+++.+++.++|+||.
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs-----~era~~La~~~-~g~~i~~---~~~~dl~~al~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRS-----EERVAALREEF-PDVEIIY---KPLDEMLACAAEADVVFT 335 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCC-----HHHHHHHHHHh-CCCceEe---ecHhhHHHHHhcCCEEEE
Confidence 47899999 59999999999999995 79999998 66764433211 1332222 233456677889999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+.+...
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 887654
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0043 Score=55.19 Aligned_cols=71 Identities=27% Similarity=0.456 Sum_probs=53.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+| +|.+|..+++.|.+.| .+|+++.|+ +++...+ +.+ +...+ +.+++.+++.++|+||
T Consensus 180 ~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs-----~~ra~~la~~~---g~~~i-----~~~~l~~~l~~aDvVi 245 (417)
T TIGR01035 180 GKKALLIG-AGEMGELVAKHLLRKGVGKILIANRT-----YERAEDLAKEL---GGEAV-----KFEDLEEYLAEADIVI 245 (417)
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc---CCeEe-----eHHHHHHHHhhCCEEE
Confidence 36899999 5999999999999999 899999998 6665322 222 22222 2346777788999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+++...
T Consensus 246 ~aT~s~~ 252 (417)
T TIGR01035 246 SSTGAPH 252 (417)
T ss_pred ECCCCCC
Confidence 9987654
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0034 Score=52.34 Aligned_cols=71 Identities=24% Similarity=0.280 Sum_probs=47.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhccCCE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVKLVDV 78 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~~~d~ 78 (312)
++++|+|.| .|.+|+.+++.|.+.|+.|.++.++.+.. ... ... ..++.|. +........+|+
T Consensus 2 ~~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~---~~~--~a~--------~lgv~d~~~~~~~~~~~~~aD~ 67 (279)
T COG0287 2 ASMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAA---TLK--AAL--------ELGVIDELTVAGLAEAAAEADL 67 (279)
T ss_pred CCcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHH---HHH--HHh--------hcCcccccccchhhhhcccCCE
Confidence 457888888 99999999999999999998888874322 111 111 1233332 222445567999
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
||.+.+..
T Consensus 68 VivavPi~ 75 (279)
T COG0287 68 VIVAVPIE 75 (279)
T ss_pred EEEeccHH
Confidence 99988754
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.01 Score=50.68 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=50.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH--------hhhhccCCCe--EEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM--------LLSFKEQGAK--LVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--------~~~l~~~~~~--~v~~D~~d~~~l~~~ 72 (312)
.++|.|+| +|-+|..++..++..|++|++++++ ++.... +..+...+.. -....+.-..++.++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~-----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~a 80 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPA-----PGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEAC 80 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHH
Confidence 47899999 8999999999999999999999998 433211 1111111110 000111112346678
Q ss_pred hccCCEEEEcCCCC
Q 021470 73 VKLVDVVICAISGV 86 (312)
Q Consensus 73 ~~~~d~v~~~~~~~ 86 (312)
++++|.|+-++.-.
T Consensus 81 v~~aDlViEavpE~ 94 (321)
T PRK07066 81 VADADFIQESAPER 94 (321)
T ss_pred hcCCCEEEECCcCC
Confidence 89999999987643
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0038 Score=52.82 Aligned_cols=35 Identities=14% Similarity=0.375 Sum_probs=32.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|..++|.|+| .|.+|..++..|+..|++|++++++
T Consensus 1 ~~i~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 1 MDIKVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred CCCcEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCC
Confidence 5567999999 8999999999999999999999998
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0035 Score=52.39 Aligned_cols=70 Identities=13% Similarity=0.228 Sum_probs=48.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC----eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH----ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+ ++|.++| .|.+|.++++.|++.|+ +|++.+|+ +++.+.+.. ..++... .+ ..++++.+
T Consensus 1 ~~-~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~-----~~~~~~l~~--~~g~~~~----~~---~~e~~~~a 64 (272)
T PRK12491 1 MN-KQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLN-----VSNLKNASD--KYGITIT----TN---NNEVANSA 64 (272)
T ss_pred CC-CeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCC-----HHHHHHHHH--hcCcEEe----CC---cHHHHhhC
Confidence 65 5899999 99999999999999874 68888887 555533221 1244321 12 22345689
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|+||.+..+.
T Consensus 65 DiIiLavkP~ 74 (272)
T PRK12491 65 DILILSIKPD 74 (272)
T ss_pred CEEEEEeChH
Confidence 9999988753
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.033 Score=47.72 Aligned_cols=98 Identities=16% Similarity=0.175 Sum_probs=60.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++||.|+| +|.+|..++..++..|. +|+.++.+................ .....+ .+ ..|. +.++++|+|
T Consensus 6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~d~----~~l~~aDiV 78 (321)
T PTZ00082 6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TNNY----EDIAGSDVV 78 (321)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CCCH----HHhCCCCEE
Confidence 36899999 69999999999988884 888888874432111111111111 111222 21 1233 247899999
Q ss_pred EEcCCCCccc-------------cchhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIR-------------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~-------------~~~~~~~~~l~~aa~~~~ 107 (312)
|.+++..... ..|....+.+++.+.+..
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~ 119 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC 119 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999764321 135566777777777776
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0066 Score=51.59 Aligned_cols=70 Identities=19% Similarity=0.228 Sum_probs=48.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..+++.|++.|++|+++.|+ +++.+.+ ...++.. ..+++++.+..+.+|+|+.+.
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~-----~~~~~~~---~~~g~~~----~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVN-----QEAVDVA---GKLGITA----RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHH---HHCCCee----cCCHHHHHHhCCCCCEEEEEe
Confidence 3799999 9999999999999999999999998 6665332 2334322 224444333333478998887
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
...
T Consensus 68 p~~ 70 (299)
T PRK12490 68 PAG 70 (299)
T ss_pred cCc
Confidence 754
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.023 Score=48.31 Aligned_cols=91 Identities=20% Similarity=0.337 Sum_probs=61.4
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhcc-------CCCeEEEccCCCHHHHHHHhcc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKE-------QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~-------~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
||.|+|+ |++|+.++..|+.++ .++..++.+.... +... ..|.+ .++.+.. .|. +.+++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a---~g~a-~DL~~~~~~~~~~~~~i~~---~~y----~~~~~ 68 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVA---EGEA-LDFHHATALTYSTNTKIRA---GDY----DDCAD 68 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchh---hHHH-HHHHhhhccCCCCCEEEEE---CCH----HHhCC
Confidence 6899996 999999999999888 4899998864322 2211 12211 1233332 233 34789
Q ss_pred CCEEEEcCCCCcc---c-------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHI---R-------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~---~-------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++.... . ..|....+.++..+.+++
T Consensus 69 aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~ 110 (307)
T cd05290 69 ADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT 110 (307)
T ss_pred CCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999997431 1 256777888888888887
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0076 Score=55.85 Aligned_cols=71 Identities=30% Similarity=0.384 Sum_probs=54.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|++++|+|+| +|++|+-++.++.+.|++|++++.++.. +.. .+ --..+.+|+.|.+.+.++.+.+|+|.
T Consensus 20 ~~~k~IgIIG-gGqlg~mla~aA~~lG~~Vi~ld~~~~a--pa~-----~~---AD~~~v~~~~D~~~l~~~a~~~dvIt 88 (577)
T PLN02948 20 VSETVVGVLG-GGQLGRMLCQAASQMGIKVKVLDPLEDC--PAS-----SV---AARHVVGSFDDRAAVREFAKRCDVLT 88 (577)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCC--chh-----hh---CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence 4568999999 7899999999999999999999876432 111 11 12345688999999998888899885
Q ss_pred Ec
Q 021470 81 CA 82 (312)
Q Consensus 81 ~~ 82 (312)
..
T Consensus 89 ~e 90 (577)
T PLN02948 89 VE 90 (577)
T ss_pred Ee
Confidence 44
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.016 Score=48.71 Aligned_cols=94 Identities=23% Similarity=0.265 Sum_probs=58.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH--hccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA--VKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~--~~~~d 77 (312)
|++.+|.|+| +|.+|..+...+++. +.++.+++..+... ......+ ..++... ..+.+.+.+. +.++|
T Consensus 2 m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es--~gla~A~---~~Gi~~~---~~~ie~LL~~~~~~dID 72 (302)
T PRK08300 2 MSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPES--DGLARAR---RLGVATS---AEGIDGLLAMPEFDDID 72 (302)
T ss_pred CCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhh--HHHHHHH---HcCCCcc---cCCHHHHHhCcCCCCCC
Confidence 3467899999 999999988888765 46888775432211 1111111 2233222 2455555543 45799
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+||.+++.. ........+.++| ++++
T Consensus 73 iVf~AT~a~--------~H~e~a~~a~eaG--k~VI 98 (302)
T PRK08300 73 IVFDATSAG--------AHVRHAAKLREAG--IRAI 98 (302)
T ss_pred EEEECCCHH--------HHHHHHHHHHHcC--CeEE
Confidence 999988643 4566777778888 4555
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.022 Score=45.08 Aligned_cols=105 Identities=17% Similarity=0.266 Sum_probs=63.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHH----hhhhccCCC--eEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQM----LLSFKEQGA--KLVSG 61 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~----~~~l~~~~~--~~v~~ 61 (312)
..+|+|+|+.| +|.++++.|...| .++++++.+.-+. ...|++. ++.+ .+.+ +.+..
T Consensus 21 ~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~~ 98 (197)
T cd01492 21 SARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDTD 98 (197)
T ss_pred hCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEec
Confidence 46899999555 9999999999999 5788876542110 0112221 2222 2333 33444
Q ss_pred cCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 62 D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
.+. +...+.++++|+|+.+... ......+-++|++.+ ++.+..++.|.
T Consensus 99 ~~~--~~~~~~~~~~dvVi~~~~~-------~~~~~~ln~~c~~~~-ip~i~~~~~G~ 146 (197)
T cd01492 99 DIS--EKPEEFFSQFDVVVATELS-------RAELVKINELCRKLG-VKFYATGVHGL 146 (197)
T ss_pred Ccc--ccHHHHHhCCCEEEECCCC-------HHHHHHHHHHHHHcC-CCEEEEEecCC
Confidence 443 2234567899999987543 445566778899888 66554444443
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.012 Score=51.63 Aligned_cols=106 Identities=21% Similarity=0.211 Sum_probs=66.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCC--------------CCChHHHHHh-hhhc--cCCCe--EEEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEI--------------GVDIEKVQML-LSFK--EQGAK--LVSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~--------------~~~~~~~~~~-~~l~--~~~~~--~v~~D 62 (312)
..+|+|+| .|.+|+.++..|...|. ++++++++.- +....|++.+ +.+. .+.++ .+...
T Consensus 135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 36899998 78899999999999994 7888877610 0001233321 2221 23343 33333
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
+ +.+.+.+.++++|+|+.+.... ..-..+-++|.+.+ ++.+.-+..|
T Consensus 214 ~-~~~~~~~~~~~~D~Vv~~~d~~-------~~r~~ln~~~~~~~-ip~i~~~~~g 260 (376)
T PRK08762 214 V-TSDNVEALLQDVDVVVDGADNF-------PTRYLLNDACVKLG-KPLVYGAVFR 260 (376)
T ss_pred C-ChHHHHHHHhCCCEEEECCCCH-------HHHHHHHHHHHHcC-CCEEEEEecc
Confidence 3 4456777888999999997653 23345778888888 6555444433
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.018 Score=47.04 Aligned_cols=107 Identities=19% Similarity=0.139 Sum_probs=66.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCCeEEEcc-C
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGAKLVSGS-F 63 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~~~v~~D-~ 63 (312)
..+|+|+| .|.+|..++..|...| -++++++++.-.. ...|++.+ +.+. .+.+++...+ .
T Consensus 24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~ 102 (240)
T TIGR02355 24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAK 102 (240)
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence 36899999 8999999999999999 5777776542111 01233211 1221 2344433332 2
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
.+.+.+.+.++++|+|+.+... ...-..+-++|.+.+ ++.+.-+..|
T Consensus 103 i~~~~~~~~~~~~DlVvd~~D~-------~~~r~~ln~~~~~~~-ip~v~~~~~g 149 (240)
T TIGR02355 103 LDDAELAALIAEHDIVVDCTDN-------VEVRNQLNRQCFAAK-VPLVSGAAIR 149 (240)
T ss_pred CCHHHHHHHhhcCCEEEEcCCC-------HHHHHHHHHHHHHcC-CCEEEEEecc
Confidence 2456677888999999998754 333455678888888 6555444444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0043 Score=53.68 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=52.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+| .|.||+.+++.|..-|.+|+++.|+.... .... ..+....+...........++.++++.+|+|+.+
T Consensus 159 gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 159 GKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSE---PEDG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChh---hhhh-hccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 47999999 89999999999999999999998863211 0000 0000011111111111445788899999999998
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 234 lPlt~ 238 (347)
T PLN02928 234 CTLTK 238 (347)
T ss_pred CCCCh
Confidence 87654
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0041 Score=52.41 Aligned_cols=66 Identities=27% Similarity=0.311 Sum_probs=49.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.+|+++++.|.+.|++|++..|...+ .+++ ...++++ .++.++++.+|+|+.+
T Consensus 16 gKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s--~~~A------~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 16 GKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKS--FEVA------KADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred cCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchh--hHHH------HHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 47899999 9999999999999999999998775221 1111 1234432 1467788899999988
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 79 LPd 81 (335)
T PRK13403 79 LPD 81 (335)
T ss_pred CCC
Confidence 875
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=48.07 Aligned_cols=98 Identities=18% Similarity=0.138 Sum_probs=63.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEE---EEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETY---VLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+-||.|+||.|.||+.|.-.| +....|. .++-.... --. ..+.+.+-......+.-++.+.++++++|+|
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~---GVa---aDlSHI~T~s~V~g~~g~~~L~~al~~advV 100 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTP---GVA---ADLSHINTNSSVVGFTGADGLENALKGADVV 100 (345)
T ss_pred cceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCC---ccc---ccccccCCCCceeccCChhHHHHHhcCCCEE
Confidence 358999999999999998655 4443333 22222110 001 2233333333334455578999999999999
Q ss_pred EEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+.-||.+.-+ +.|....+++..++.+.-
T Consensus 101 vIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~c 136 (345)
T KOG1494|consen 101 VIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCC 136 (345)
T ss_pred EecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhC
Confidence 9999976532 267777889999888765
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0084 Score=51.23 Aligned_cols=68 Identities=19% Similarity=0.197 Sum_probs=48.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+++.|+| .|.||+.+++.|..-|.+|.++++..+.. .. +. -...-.+++.++++.+|+|...
T Consensus 142 gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~---~~---------~~----~~~~~~~~Ld~lL~~sDiv~lh 204 (324)
T COG0111 142 GKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRE---RA---------GV----DGVVGVDSLDELLAEADILTLH 204 (324)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchh---hh---------cc----ccceecccHHHHHhhCCEEEEc
Confidence 57999999 99999999999999999999998842211 01 00 0011234577777788888777
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+.+.
T Consensus 205 ~PlT~ 209 (324)
T COG0111 205 LPLTP 209 (324)
T ss_pred CCCCc
Confidence 76654
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.014 Score=53.11 Aligned_cols=87 Identities=21% Similarity=0.187 Sum_probs=59.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|..+++.|.+.|++|+++.+++... .....+.+...++++..++-.. ...++|.||..
T Consensus 16 ~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~---~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 16 GLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDER---HRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh---hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 46899999 69999999999999999999998663211 1112244666788887765322 23578999988
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.|..... .++..|++.|
T Consensus 86 ~Gi~~~~--------~~~~~a~~~g 102 (480)
T PRK01438 86 PGWRPDA--------PLLAAAADAG 102 (480)
T ss_pred CCcCCCC--------HHHHHHHHCC
Confidence 8865421 3455555555
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0018 Score=47.00 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=28.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEE-CC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLH-RP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~ 36 (312)
.++|.|+| .|.+|.+|++.|.+.||+|..+. |+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs 43 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRS 43 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 36899999 69999999999999999999884 44
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0014 Score=55.21 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=31.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
+++|.|+| .|.+|..++..|+..|++|++++++
T Consensus 5 ~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~ 37 (286)
T PRK07819 5 IQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETT 37 (286)
T ss_pred ccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECC
Confidence 46899999 6999999999999999999999998
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.007 Score=52.58 Aligned_cols=58 Identities=21% Similarity=0.177 Sum_probs=43.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+|.+|.+|..+++.|.+. +++|++++|.... ..+ ..+.++++|+||.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~-----------------------~~~---~~~~v~~aDlVil 57 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG-----------------------SLD---PATLLQRADVLIF 57 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc-----------------------cCC---HHHHhcCCCEEEE
Confidence 589999999999999999999975 7899988775110 112 2345678898888
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
|++..
T Consensus 58 avPv~ 62 (370)
T PRK08818 58 SAPIR 62 (370)
T ss_pred eCCHH
Confidence 88743
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.019 Score=44.45 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=62.3
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCC---CCC----------ChHHHHHh-hhhc--cCC--CeEEEccCCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPE---IGV----------DIEKVQML-LSFK--EQG--AKLVSGSFND 65 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~----------~~~~~~~~-~~l~--~~~--~~~v~~D~~d 65 (312)
+|+|+| .|.+|..+++.|...|. ++++++.+. +.. ...|.+.. +.++ .+. ++.+...+ +
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~-~ 78 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKI-D 78 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeec-C
Confidence 589999 79999999999999995 688887763 110 01233221 1221 233 33444444 3
Q ss_pred HHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHh-CCCceee
Q 021470 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEA-GNVKRFL 113 (312)
Q Consensus 66 ~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~-~~v~~~v 113 (312)
.+.+.+.++++|+||.+... ...-..+.+.+.+. + ++-+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~d~-------~~~r~~i~~~~~~~~~-ip~i~ 119 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFDN-------AETKAMLAESLLGNKN-KPVVC 119 (174)
T ss_pred hhhHHHHhcCCCEEEECCCC-------HHHHHHHHHHHHHHCC-CCEEE
Confidence 45677888999999998543 33334577777776 6 54443
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.004 Score=53.50 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=48.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.+|+.+++.|...|++|++++|+. .+.. ..++ . ..++.++++++|+|+.+
T Consensus 146 g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~-----~~~~-------~~~~-----~--~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 146 NMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYP-----NKDL-------DFLT-----Y--KDSVKEAIKDADIISLH 205 (330)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCh-----hHhh-------hhhh-----c--cCCHHHHHhcCCEEEEe
Confidence 46899999 89999999999999999999999872 2210 0010 1 12467788899999988
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 206 lP~t~ 210 (330)
T PRK12480 206 VPANK 210 (330)
T ss_pred CCCcH
Confidence 87653
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0072 Score=54.06 Aligned_cols=74 Identities=27% Similarity=0.356 Sum_probs=54.3
Q ss_pred CcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH
Q 021470 3 KSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 66 (312)
.++||||+| ||..|.+|++++..+|.+|+.++-..+.. .+.+++++.. ...
T Consensus 256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~-----------~p~~v~~i~V--~ta 322 (475)
T PRK13982 256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA-----------DPQGVKVIHV--ESA 322 (475)
T ss_pred CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC-----------CCCCceEEEe--cCH
Confidence 468888876 79999999999999999999997542211 2456776654 455
Q ss_pred HHHHHHhc---cCCEEEEcCCCCccc
Q 021470 67 QSLVNAVK---LVDVVICAISGVHIR 89 (312)
Q Consensus 67 ~~l~~~~~---~~d~v~~~~~~~~~~ 89 (312)
+++.+++. .+|++|++|+..+++
T Consensus 323 ~eM~~av~~~~~~Di~I~aAAVaDyr 348 (475)
T PRK13982 323 RQMLAAVEAALPADIAIFAAAVADWR 348 (475)
T ss_pred HHHHHHHHhhCCCCEEEEecccccee
Confidence 55555543 489999999987653
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0057 Score=53.77 Aligned_cols=76 Identities=26% Similarity=0.164 Sum_probs=47.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccC----CCeE----EEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ----GAKL----VSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~----~~~~----v~~D~~d~~~l~~~~~~ 75 (312)
|+|.|+| .|++|..++..|. .||+|+++.++ +++.+.+..-..+ +++- ..+.+....+..++.++
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d-----~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDIL-----PSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRD 73 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECC-----HHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcC
Confidence 3799998 9999999996554 69999999998 6666433321000 0000 01111111123344578
Q ss_pred CCEEEEcCCCC
Q 021470 76 VDVVICAISGV 86 (312)
Q Consensus 76 ~d~v~~~~~~~ 86 (312)
+|+||-+.+..
T Consensus 74 ad~vii~Vpt~ 84 (388)
T PRK15057 74 ADYVIIATPTD 84 (388)
T ss_pred CCEEEEeCCCC
Confidence 99999988865
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0015 Score=55.36 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+.++|.|+| .|.+|..++..|+..|++|++++|+
T Consensus 2 ~~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~ 36 (292)
T PRK07530 2 MAIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVS 36 (292)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3358999999 7999999999999999999999998
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0059 Score=50.85 Aligned_cols=92 Identities=25% Similarity=0.228 Sum_probs=64.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+.+.|+|+.| +|.--++.-.+.|++|++++++.+ .|. +.+...+++.+..-..|++.++++..--|.++|+
T Consensus 182 G~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~----kke---ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~ 253 (360)
T KOG0023|consen 182 GKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSK----KKE---EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDT 253 (360)
T ss_pred CcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCch----hHH---HHHHhcCcceeEEecCCHHHHHHHHHhhcCccee
Confidence 47899999888 999999888899999999999842 334 3344567887766566888887777655555555
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
+.... .-....++..++..|
T Consensus 254 v~~~a-----~~~~~~~~~~lk~~G 273 (360)
T KOG0023|consen 254 VSNLA-----EHALEPLLGLLKVNG 273 (360)
T ss_pred eeecc-----ccchHHHHHHhhcCC
Confidence 54221 223445667777666
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0083 Score=50.65 Aligned_cols=87 Identities=24% Similarity=0.242 Sum_probs=51.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+++|.|+||||.+|+.+++.|.++.+ .+..+....+--. +. -.+.... ..+.-+..|... ++++|++
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~--~~---~~f~~~~-~~v~~~~~~~~~----~~~~Div 70 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGK--KY---IEFGGKS-IGVPEDAADEFV----FSDVDIV 70 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCC--cc---ccccCcc-ccCccccccccc----cccCCEE
Confidence 47999999999999999999988652 3444433321110 00 0000000 011111122222 3489999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
|.+++... .+.+...++++|
T Consensus 71 f~~ag~~~--------s~~~~p~~~~~G 90 (334)
T COG0136 71 FFAAGGSV--------SKEVEPKAAEAG 90 (334)
T ss_pred EEeCchHH--------HHHHHHHHHHcC
Confidence 99998543 467888888888
|
|
| >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.019 Score=52.02 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=57.3
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAIS 84 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~ 84 (312)
+|+|+| .|..|...++.|.+.|++|.+.+++.... ..+....+...++++..+.-.+.+.+...+.+.|.|+...+
T Consensus 2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~---~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~g 77 (459)
T PRK02705 2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPE---LLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPG 77 (459)
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchh---hHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCC
Confidence 689999 88899999999999999999998764322 11111335556888876654455555566778999999777
Q ss_pred CCc
Q 021470 85 GVH 87 (312)
Q Consensus 85 ~~~ 87 (312)
...
T Consensus 78 i~~ 80 (459)
T PRK02705 78 IPW 80 (459)
T ss_pred CCC
Confidence 654
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0072 Score=52.23 Aligned_cols=75 Identities=24% Similarity=0.351 Sum_probs=51.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d 77 (312)
.+.|||.||+|.+|+..++.+...| ..|++. ++ .++.+..+.+ ++.. ..|+.+++-.+...+ ++|
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~-~s-----~e~~~l~k~l---GAd~-vvdy~~~~~~e~~kk~~~~~~D 227 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTA-CS-----KEKLELVKKL---GADE-VVDYKDENVVELIKKYTGKGVD 227 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEE-cc-----cchHHHHHHc---CCcE-eecCCCHHHHHHHHhhcCCCcc
Confidence 3689999999999999999888888 455544 44 3344343444 3333 357777655555444 699
Q ss_pred EEEEcCCCCc
Q 021470 78 VVICAISGVH 87 (312)
Q Consensus 78 ~v~~~~~~~~ 87 (312)
+|+.|++...
T Consensus 228 vVlD~vg~~~ 237 (347)
T KOG1198|consen 228 VVLDCVGGST 237 (347)
T ss_pred EEEECCCCCc
Confidence 9999999854
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.034 Score=46.34 Aligned_cols=32 Identities=34% Similarity=0.554 Sum_probs=27.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEEC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLHR 35 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r 35 (312)
++|+|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 69999999999999999999864 678888654
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0071 Score=52.88 Aligned_cols=69 Identities=20% Similarity=0.161 Sum_probs=49.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|.+|.++.|..... +.. ...+++ -..++.++++.+|+|+.+
T Consensus 192 gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~--~~~------~~~g~~-------~~~~l~ell~~aDvV~l~ 255 (385)
T PRK07574 192 GMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE--EVE------QELGLT-------YHVSFDSLVSVCDVVTIH 255 (385)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch--hhH------hhcCce-------ecCCHHHHhhcCCEEEEc
Confidence 47899999 89999999999999999999998873211 000 111221 123477788999999988
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 256 lPlt~ 260 (385)
T PRK07574 256 CPLHP 260 (385)
T ss_pred CCCCH
Confidence 87643
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.011 Score=52.26 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=32.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
+|+|||||+...+|..+++.|.+.|++|++++...
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 78999999999999999999999999999998873
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.018 Score=50.03 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=64.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCC--eEEEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGA--KLVSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~--~~v~~D 62 (312)
..+|+|+| .|.+|..++..|...| -++++++.+.-+. ...|.+.. +.+. .+.+ +.+...
T Consensus 28 ~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~ 106 (355)
T PRK05597 28 DAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRR 106 (355)
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEee
Confidence 46899999 7999999999999999 5777776652110 01233211 1221 2333 344444
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+ +.+...+.++++|+|+.+.... ..-..+-++|.+.+ ++.+.
T Consensus 107 i-~~~~~~~~~~~~DvVvd~~d~~-------~~r~~~n~~c~~~~-ip~v~ 148 (355)
T PRK05597 107 L-TWSNALDELRDADVILDGSDNF-------DTRHLASWAAARLG-IPHVW 148 (355)
T ss_pred c-CHHHHHHHHhCCCEEEECCCCH-------HHHHHHHHHHHHcC-CCEEE
Confidence 4 3456677789999999998543 23334667888888 65443
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0071 Score=53.44 Aligned_cols=66 Identities=20% Similarity=0.227 Sum_probs=48.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|+.++..|...|.+|+++.++ +.+..... ..++++. + +.++++++|+||.+
T Consensus 212 Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~d-----p~ra~~A~---~~G~~v~-----~---l~eal~~aDVVI~a 274 (425)
T PRK05476 212 GKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVD-----PICALQAA---MDGFRVM-----T---MEEAAELGDIFVTA 274 (425)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC-----chhhHHHH---hcCCEec-----C---HHHHHhCCCEEEEC
Confidence 57899999 7999999999999999999999887 44432111 2244422 2 34567799999988
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
++.
T Consensus 275 TG~ 277 (425)
T PRK05476 275 TGN 277 (425)
T ss_pred CCC
Confidence 754
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.038 Score=44.33 Aligned_cols=101 Identities=22% Similarity=0.220 Sum_probs=63.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCC---CCC----------ChHHHHHh-hhhc--cCCC--eEEEccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPE---IGV----------DIEKVQML-LSFK--EQGA--KLVSGSF 63 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~---~~~----------~~~~~~~~-~~l~--~~~~--~~v~~D~ 63 (312)
..+|+|+| .|.+|..++..|...| .++++++.+. +.. ...|.... +.+. .+.+ +.+...+
T Consensus 28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 46899999 7999999999999999 4688877661 110 01233221 1221 2333 3444444
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHh-CCCceee
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEA-GNVKRFL 113 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~-~~v~~~v 113 (312)
+ .+.+.+.++++|+||.+... ...-..+.+.|.+. + ++.+.
T Consensus 107 ~-~~~~~~~~~~~DvVI~a~D~-------~~~r~~l~~~~~~~~~-~p~I~ 148 (212)
T PRK08644 107 D-EDNIEELFKDCDIVVEAFDN-------AETKAMLVETVLEHPG-KKLVA 148 (212)
T ss_pred C-HHHHHHHHcCCCEEEECCCC-------HHHHHHHHHHHHHhCC-CCEEE
Confidence 3 45667788899999988533 33445677888887 6 54443
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.022 Score=51.50 Aligned_cols=131 Identities=18% Similarity=0.104 Sum_probs=76.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|..|..+++.|.+.|++|++.+++.....+.. ...+...++.++.++.. ++. +.++|.||..
T Consensus 14 ~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~---~~~l~~~gi~~~~~~~~-~~~----~~~~dlVV~S 84 (458)
T PRK01710 14 NKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEV---SNELKELGVKLVLGENY-LDK----LDGFDVIFKT 84 (458)
T ss_pred CCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchHH---HHHHHhCCCEEEeCCCC-hHH----hccCCEEEEC
Confidence 36899999 899999999999999999999987643221111 12344567888776442 222 4678999998
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeecCCC-CCCcccccccCCCCCchhhhHHHHHHHHHHhCCC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEF-GTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIP 151 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~-g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~ 151 (312)
.+... ....+.+|++.+ ++.+=-..+ ........-..+..++...+|..+..++...+..
T Consensus 85 pgi~~--------~~p~~~~a~~~~-i~i~s~~e~~~~~~~~~vIaITGTnGKTTT~~ll~~iL~~~g~~ 145 (458)
T PRK01710 85 PSMRI--------DSPELVKAKEEG-AYITSEMEEFIKYCPAKVFGVTGSDGKTTTTTLIYEMLKEEGYK 145 (458)
T ss_pred CCCCC--------CchHHHHHHHcC-CcEEechHHhhhhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCC
Confidence 76543 224566677766 543210000 0000000011122345555777777777665544
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0054 Score=52.27 Aligned_cols=68 Identities=24% Similarity=0.247 Sum_probs=49.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.+|.++++.|.+.|++|++..|+.+.. ..++ ...++.. . +..++++.+|+|+.+
T Consensus 17 gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s-~~~A------~~~G~~~-----~---s~~eaa~~ADVVvLa 80 (330)
T PRK05479 17 GKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKS-WKKA------EADGFEV-----L---TVAEAAKWADVIMIL 80 (330)
T ss_pred CCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhh-HHHH------HHCCCee-----C---CHHHHHhcCCEEEEc
Confidence 47899999 99999999999999999999887763322 1111 1224422 1 345677889999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 81 VPd~ 84 (330)
T PRK05479 81 LPDE 84 (330)
T ss_pred CCHH
Confidence 8754
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0027 Score=47.64 Aligned_cols=68 Identities=26% Similarity=0.270 Sum_probs=46.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| -|.+|.+.+..|.++|.+|++..|..+.+ .+++ ...++++ .++.++.+.+|+|+.+
T Consensus 4 ~k~IAViG-yGsQG~a~AlNLrDSG~~V~Vglr~~s~s-~~~A------~~~Gf~v--------~~~~eAv~~aDvV~~L 67 (165)
T PF07991_consen 4 GKTIAVIG-YGSQGHAHALNLRDSGVNVIVGLREGSAS-WEKA------KADGFEV--------MSVAEAVKKADVVMLL 67 (165)
T ss_dssp TSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHH-HHHH------HHTT-EC--------CEHHHHHHC-SEEEE-
T ss_pred CCEEEEEC-CChHHHHHHHHHHhCCCCEEEEecCCCcC-HHHH------HHCCCee--------ccHHHHHhhCCEEEEe
Confidence 57999999 78889999999999999999999986532 2232 2445544 2567778899999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 68 ~PD~ 71 (165)
T PF07991_consen 68 LPDE 71 (165)
T ss_dssp S-HH
T ss_pred CChH
Confidence 8754
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.03 Score=45.59 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=62.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCC--------------C-ChHHHHH----hhhhccCCC--eEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIG--------------V-DIEKVQM----LLSFKEQGA--KLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~--------------~-~~~~~~~----~~~l~~~~~--~~v~ 60 (312)
..+|+|+| .|.+|..++..|...| .++++++.+.-. . .+.|... ++.+ .+.+ +.+.
T Consensus 27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~~ 104 (231)
T PRK08328 27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETFV 104 (231)
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEEe
Confidence 36899999 8999999999999999 578777644111 0 0112221 1222 2333 3444
Q ss_pred ccCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 61 ~D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
..+ +.+.+.+.++++|+||.+.... ..-..+-++|++.+ ++.+.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~~-------~~r~~l~~~~~~~~-ip~i~ 148 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDNF-------ETRYLLDDYAHKKG-IPLVH 148 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCH-------HHHHHHHHHHHHcC-CCEEE
Confidence 444 4566777889999999987653 22334556788888 55443
|
|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.027 Score=50.86 Aligned_cols=93 Identities=17% Similarity=0.251 Sum_probs=58.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEc-------cCCCHHHHHHHhc-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG-------SFNDYQSLVNAVK- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~-------D~~d~~~l~~~~~- 74 (312)
|++|||+| .|.+|..+++.+.+.|++|++++.......+. . .+ .. +.+.. ++.|.+.+.++.+
T Consensus 2 ~k~iLi~g-~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~-~----~~--ad-~~~~~~~~~~~~~y~d~~~l~~~a~~ 72 (451)
T PRK08591 2 FDKILIAN-RGEIALRIIRACKELGIKTVAVHSTADRDALH-V----QL--AD-EAVCIGPAPSKKSYLNIPAIISAAEI 72 (451)
T ss_pred cceEEEEC-CCHHHHHHHHHHHHcCCeEEEEcChhhccCCC-H----hH--CC-EEEEeCCCCcccccCCHHHHHHHHHH
Confidence 58999998 99999999999999999999985542211000 0 01 11 22221 4556677777644
Q ss_pred -cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCcee
Q 021470 75 -LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRF 112 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~ 112 (312)
++|+|+-..+..... ..+...+++.| ++.+
T Consensus 73 ~~id~I~p~~~~~~e~-------~~~~~~~e~~g-i~~~ 103 (451)
T PRK08591 73 TGADAIHPGYGFLSEN-------ADFAEICEDSG-FTFI 103 (451)
T ss_pred hCCCEEEECCCccccC-------HHHHHHHHHCC-CceE
Confidence 799998766433211 13566677777 5433
|
|
| >PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.032 Score=48.16 Aligned_cols=129 Identities=21% Similarity=0.223 Sum_probs=72.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCH--------------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDY-------------- 66 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~-------------- 66 (312)
|.+|||.| ||-++-.++.-|.+.+ .+|-...|. ..|.+ .++.+. .+...++.++.++
T Consensus 1 m~~VLI~G-tGPvAiQLAv~lk~~~~~~vGi~~R~-----S~rSq~f~~aL~-~~~~~~~v~vqn~~h~~l~G~~~id~~ 73 (429)
T PF10100_consen 1 MGNVLIVG-TGPVAIQLAVILKKHGNCRVGIVGRE-----SVRSQRFFEALA-RSDGLFEVSVQNEQHQALSGECTIDHV 73 (429)
T ss_pred CCceEEEc-CCHHHHHHHHHHHhccCceeeeecCc-----chhHHHHHHHHH-hCCCEEEEeecchhhhhhcCeEEhhHh
Confidence 46999999 9999999999888777 578888886 33443 334443 3334444444332
Q ss_pred -HHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec-C-CCCCCcccccccCCCCCchhhhHHHHHH
Q 021470 67 -QSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-S-EFGTDPAKMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 67 -~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S-~~g~~~~~~~~~~~p~~~~~~~K~~~e~ 143 (312)
+++.++...-|.+|.+...... ..-.+++-. ..-.+ ++++|+ | .+|. ...++.
T Consensus 74 ~~~~~~i~g~WdtlILavtaDAY----~~VL~ql~~-~~L~~-vk~iVLvSPtfGS------------------~~lv~~ 129 (429)
T PF10100_consen 74 FQDYEEIEGEWDTLILAVTADAY----LDVLQQLPW-EVLKR-VKSIVLVSPTFGS------------------HLLVKG 129 (429)
T ss_pred hcCHHHhcccccEEEEEechHHH----HHHHHhcCH-HHHhh-CCEEEEECcccch------------------HHHHHH
Confidence 2222222345788877665431 222233322 23335 888886 3 3442 333555
Q ss_pred HHHHhCCCeEEEecccccc
Q 021470 144 AIEDAGIPFTYVSANCFAG 162 (312)
Q Consensus 144 ~~~~~~~~~~i~r~~~~~~ 162 (312)
++.+.+...-++-.+.|+|
T Consensus 130 ~l~~~~~~~EVISFStY~g 148 (429)
T PF10100_consen 130 FLNDLGPDAEVISFSTYYG 148 (429)
T ss_pred HHHhcCCCceEEEeecccc
Confidence 5555555555555444444
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.026 Score=46.71 Aligned_cols=100 Identities=23% Similarity=0.346 Sum_probs=60.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCe-------------EEEccCCCHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-------------LVSGSFNDYQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-------------~v~~D~~d~~~l 69 (312)
+++|.-+| .|..|++++..|++.||+|+++.|. ..|. +.+...+.+ ++..=+.|+...
T Consensus 35 ~~~iGFIG-LG~MG~~M~~nLik~G~kVtV~dr~-----~~k~---~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v 105 (327)
T KOG0409|consen 35 KTRIGFIG-LGNMGSAMVSNLIKAGYKVTVYDRT-----KDKC---KEFQEAGARVANSPAEVAEDSDVVITMVPNPKDV 105 (327)
T ss_pred cceeeEEe-eccchHHHHHHHHHcCCEEEEEeCc-----HHHH---HHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhh
Confidence 46888999 9999999999999999999999998 6666 334444433 222233344444
Q ss_pred HHHhccCCEEEEcCCCCc-----cccchhHhHHHHHHHHHHhCCCceee
Q 021470 70 VNAVKLVDVVICAISGVH-----IRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~~-----~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
++++.|-+.|+....... ...+.....+.+.+++...+ .+++
T Consensus 106 ~~v~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~--~~~v 152 (327)
T KOG0409|consen 106 KDVLLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKG--GRFV 152 (327)
T ss_pred HHHhcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCC--CeEE
Confidence 444443333333111110 01123444677777777766 4555
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.034 Score=45.66 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=63.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCC--eEEEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGA--KLVSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~--~~v~~D 62 (312)
..+|+|+|+ |.+|..+++.|...| .++++++.+.-+. ...|.+.+ +.+. .+.+ +.+...
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 468999995 999999999999999 5777775542111 01233221 1222 2333 444444
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCcee
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRF 112 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~ 112 (312)
+ +.+.+.+.++++|+||.+... ...-..+-++|.+.+ ++.+
T Consensus 111 i-~~~~~~~~~~~~DiVi~~~D~-------~~~r~~ln~~~~~~~-ip~v 151 (245)
T PRK05690 111 L-DDDELAALIAGHDLVLDCTDN-------VATRNQLNRACFAAK-KPLV 151 (245)
T ss_pred C-CHHHHHHHHhcCCEEEecCCC-------HHHHHHHHHHHHHhC-CEEE
Confidence 4 455677788999999998753 334455778888888 5544
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.021 Score=48.69 Aligned_cols=64 Identities=23% Similarity=0.239 Sum_probs=47.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+++.|+| .|.||+.+++.+..-|-+|.+++|..... ..++ ...++.++++.+|+|+.+
T Consensus 145 gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~------------~~~~--------~~~~l~ell~~sDvv~lh 203 (311)
T PRK08410 145 GKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK------------NEEY--------ERVSLEELLKTSDIISIH 203 (311)
T ss_pred CCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc------------ccCc--------eeecHHHHhhcCCEEEEe
Confidence 57999999 99999999999988899999998752110 1111 123577888889999877
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 204 ~Plt~ 208 (311)
T PRK08410 204 APLNE 208 (311)
T ss_pred CCCCc
Confidence 76554
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0098 Score=50.57 Aligned_cols=72 Identities=21% Similarity=0.224 Sum_probs=51.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHh-CC-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLA-LG-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~-~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++++|+| +|.+|+..+++++. .+ .+|+++.|+ +++.+.+ +.+...++.+. . +++.+++.++|+|+
T Consensus 126 ~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~-----~~~a~~~a~~~~~~~~~~~---~---~~~~~av~~aDiVi 193 (304)
T PRK07340 126 GDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRT-----AASAAAFCAHARALGPTAE---P---LDGEAIPEAVDLVV 193 (304)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCC-----HHHHHHHHHHHHhcCCeeE---E---CCHHHHhhcCCEEE
Confidence 6899999 89999999999976 45 689999998 6666533 33332233332 2 34556678999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+.+...
T Consensus 194 taT~s~~ 200 (304)
T PRK07340 194 TATTSRT 200 (304)
T ss_pred EccCCCC
Confidence 9988664
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=39.06 Aligned_cols=34 Identities=32% Similarity=0.620 Sum_probs=30.8
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG 39 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 39 (312)
+|+|+| +|++|-.++..|.+.|.+|+++.|++..
T Consensus 1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 588999 9999999999999999999999998543
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0049 Score=48.73 Aligned_cols=141 Identities=14% Similarity=0.141 Sum_probs=75.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeE--------EEccCCCHHHHHHHhc-
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKL--------VSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~--------v~~D~~d~~~l~~~~~- 74 (312)
+.||+||++-.||..++..+.+.+.+.....+..... ...+..+ +.+|......+.+..+
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a-----------~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~ 75 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLA-----------ELEGLKVAYGDDFVHVVGDITEEQLLGALREA 75 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccc-----------cccceEEEecCCcceechHHHHHHHHHHHHhh
Confidence 5688999999999999999988875444433332111 0223333 3344444443333332
Q ss_pred ------cCCEEEEcCCCCccc-----------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccc
Q 021470 75 ------LVDVVICAISGVHIR-----------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~-----------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
.-|.|||++|...+- +.|+.....+.. ..++....+.+|. |+.....
T Consensus 76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~----- 150 (253)
T KOG1204|consen 76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR----- 150 (253)
T ss_pred hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----
Confidence 369999999976521 133333333333 3333320133443 4433211
Q ss_pred cCCCCCchhh-hHHHHHHHHHH-----h-CCCeEEEeccccc
Q 021470 127 AMEPGRVTFD-DKMVVRKAIED-----A-GIPFTYVSANCFA 161 (312)
Q Consensus 127 ~~~p~~~~~~-~K~~~e~~~~~-----~-~~~~~i~r~~~~~ 161 (312)
|.. ....|- +|++.+.+.+. . ++.+..++||.+-
T Consensus 151 p~~-~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvD 191 (253)
T KOG1204|consen 151 PFS-SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVD 191 (253)
T ss_pred ccc-HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCccc
Confidence 111 234444 89888877653 2 5556667888753
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0084 Score=51.91 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=57.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH----HHHHHHh-ccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY----QSLVNAV-KLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~----~~l~~~~-~~~d~ 78 (312)
.+|+|+||+|.+|..+++.+...|.+|++++++ +++.+.++. ..++..+ .|..+. +.+.+.. .++|+
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~-----~~~~~~~~~--~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~ 224 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGS-----DEKVDLLKN--KLGFDDA-FNYKEEPDLDAALKRYFPNGIDI 224 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--hcCCcee-EEcCCcccHHHHHHHhCCCCcEE
Confidence 589999999999999999888999999999888 666644433 0244322 222221 2233322 37899
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
||.+.+.. .....++.++..|
T Consensus 225 v~d~~g~~--------~~~~~~~~l~~~G 245 (338)
T cd08295 225 YFDNVGGK--------MLDAVLLNMNLHG 245 (338)
T ss_pred EEECCCHH--------HHHHHHHHhccCc
Confidence 99987632 2345566665555
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=49.07 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=50.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHh-hhhccC-CCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQML-LSFKEQ-GAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~-~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++++|+| +|..+++++..|...| .+|+++.|+... .+|++.+ +.+... +..+...++.+.+.+.+.+.++|+|
T Consensus 124 ~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt~~~--~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 124 GKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEF--FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCccH--HHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 36899999 5666999999999988 589999997331 2344332 222111 1112222333333455566789999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
||+.+..
T Consensus 201 INaTp~G 207 (288)
T PRK12749 201 TNGTKVG 207 (288)
T ss_pred EECCCCC
Confidence 9988653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 312 | ||||
| 1qyd_A | 313 | Crystal Structures Of Pinoresinol-Lariciresinol And | 1e-107 | ||
| 1qyc_A | 308 | Crystal Structures Of Pinoresinol-Lariciresinol And | 1e-85 | ||
| 2gas_A | 307 | Crystal Structure Of Isoflavone Reductase Length = | 2e-66 | ||
| 2qw8_A | 314 | Structure Of Eugenol Synthase From Ocimum Basilicum | 8e-62 | ||
| 2qx7_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 1e-61 | ||
| 2r2g_A | 318 | Structure Of Eugenol Synthase From Ocimum Basilicum | 2e-61 | ||
| 3c3x_A | 318 | The Multiple Phenylpropene Synthases In Both Clarki | 5e-61 | ||
| 3c1o_A | 321 | The Multiple Phenylpropene Synthases In Both Clarki | 3e-57 | ||
| 3i52_A | 346 | Ternary Complex Structure Of Leucoanthocyanidin Red | 2e-53 | ||
| 1xgk_A | 352 | Crystal Structure Of N12g And A18g Mutant Nmra Leng | 4e-04 |
| >pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313 | Back alignment and structure |
|
| >pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308 | Back alignment and structure |
|
| >pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307 | Back alignment and structure |
|
| >pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314 | Back alignment and structure |
|
| >pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318 | Back alignment and structure |
|
| >pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318 | Back alignment and structure |
|
| >pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318 | Back alignment and structure |
|
| >pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321 | Back alignment and structure |
|
| >pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346 | Back alignment and structure |
|
| >pdb|1XGK|A Chain A, Crystal Structure Of N12g And A18g Mutant Nmra Length = 352 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 312 | |||
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 1e-124 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 1e-120 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 1e-118 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 1e-117 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 1e-113 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 1e-113 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 1e-29 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 2e-23 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 2e-21 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 1e-20 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 4e-20 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 1e-19 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 2e-19 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 8e-19 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 1e-17 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 2e-17 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 3e-16 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 4e-14 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 6e-13 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 2e-12 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 1e-11 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 3e-07 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 6e-07 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 7e-07 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 8e-06 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 6e-05 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 8e-05 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 8e-05 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 1e-04 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 4e-04 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 5e-04 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 6e-04 |
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 356 bits (916), Expect = e-124
Identities = 181/312 (58%), Positives = 243/312 (77%), Gaps = 2/312 (0%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+KS+VLI+GGTGY+GKR+V AS++LGH TYVL RPE+ +I+KVQMLL FK+ GAKL+
Sbjct: 3 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 62
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
S +D+Q LV+A+K VDVVI A++G + SH IL QLKLV+AIKEAGN+KRFLPSEFG DP
Sbjct: 63 SLDDHQRLVDALKQVDVVISALAG-GVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 121
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ-PGSILPSKDS 180
M +A++PG +TF DK VR+AIE A IP+TYVS+N FAGYF G L Q G ++P +D
Sbjct: 122 DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK 181
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
V++ GDGN K I+VDEDD+ YT+K+I+DP+TLN+TMY+RPP NILSQ+EV++ WE+L
Sbjct: 182 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 241
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
+ L K IS ++FLA MK+++Y ++ H Y + + G L NFEIG +EA++LYPE+K
Sbjct: 242 QNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVK 301
Query: 301 YTTVEEYLRRYL 312
Y T++ YL RY+
Sbjct: 302 YVTMDSYLERYV 313
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 346 bits (889), Expect = e-120
Identities = 155/313 (49%), Positives = 212/313 (67%), Gaps = 7/313 (2%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-DIEKVQMLLSFKEQGAKLV 59
+S++L+IG TGY+G+ + KASL LGH T++L R + EK Q+L SFK GA +V
Sbjct: 2 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61
Query: 60 SGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119
GS +D+ SLV AVK VDVVI + + I S Q+ ++ AIKE G VKRF PSEFG
Sbjct: 62 HGSIDDHASLVEAVKNVDVVISTVGSLQIES-----QVNIIKAIKEVGTVKRFFPSEFGN 116
Query: 120 DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKD 179
D + +A+EP + F+ K VR+AIE GIP+TYVS+NCFAGYFL L Q G P +D
Sbjct: 117 DVDNV-HAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRD 175
Query: 180 SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239
VV+LGDGN + ++V E+DI +T+KA++DPRTLN+T+YLR P N LS E+V WEK I
Sbjct: 176 KVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235
Query: 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEI 299
KTL+K+ + +EE L + + + + + + + +G TNFEIG GVEASQLYP++
Sbjct: 236 DKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDV 295
Query: 300 KYTTVEEYLRRYL 312
KYTTV+EYL ++
Sbjct: 296 KYTTVDEYLSNFV 308
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 341 bits (877), Expect = e-118
Identities = 128/312 (41%), Positives = 198/312 (63%), Gaps = 8/312 (2%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV--DIEKVQMLLSFKEQGAKLVS 60
++K+LI+G TG +G+ +V AS+ G+ TY L R I K +++ +++ G L+
Sbjct: 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
G ND+++LV A+K VD+VICA + I Q+K++ AIKEAGNVK+F PSEFG D
Sbjct: 62 GDINDHETLVKAIKQVDIVICAAGRLLIED-----QVKIIKAIKEAGNVKKFFPSEFGLD 116
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
+ +A+EP R F++K +R+ IE G+P+TY+ + F GYFL L Q + P +D
Sbjct: 117 VDRH-DAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDK 175
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
VV+LGDGN K YV E D+ +T++A NDP TLN+ +++R PKN L+Q EV+ WEK IG
Sbjct: 176 VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
KTL+K+ +S+E+ L ++E ++ L Y+ +G + +EAS+ YP++
Sbjct: 236 KTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKDIEASEAYPDVT 295
Query: 301 YTTVEEYLRRYL 312
YTT +EYL +++
Sbjct: 296 YTTADEYLNQFV 307
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 339 bits (870), Expect = e-117
Identities = 110/312 (35%), Positives = 181/312 (58%), Gaps = 7/312 (2%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI-EKVQMLLSFKEQGAKLVS 60
K++I GGTGY+GK +V+ASL+ H T++ RP VQ+ F+ G ++
Sbjct: 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
G +++ +V+ +K VD+VI A+ I S Q+ +++AIK AGN+KRFLPS+FG +
Sbjct: 63 GEMEEHEKMVSVLKQVDIVISALPFPMISS-----QIHIINAIKAAGNIKRFLPSDFGCE 117
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
++ + P + K ++R+AIE A +P+TYVSANCF YF+ L P D
Sbjct: 118 EDRI-KPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDD 176
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
+V+ G G K + E+DIA YT+K DPR NR + RPPKNI+SQ E++ WE G
Sbjct: 177 IVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSG 236
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
+ +K + E+ + +E + ++ + + +G L ++E+ + +EAS LYPE++
Sbjct: 237 LSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKDDIEASNLYPELE 296
Query: 301 YTTVEEYLRRYL 312
+T+++ L ++
Sbjct: 297 FTSIDGLLDLFI 308
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 331 bits (850), Expect = e-113
Identities = 115/314 (36%), Positives = 178/314 (56%), Gaps = 10/314 (3%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
K +VLI G TG++G+ + ASL TY+L RP K ++ + +++GA +V G
Sbjct: 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG-PRSPSKAKIFKALEDKGAIIVYG 67
Query: 62 SFNDYQSLVNAVKL--VDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119
N+ +++ +K +D+V+ + G IL Q+ LV A+K G +KRFLPSEFG
Sbjct: 68 LINEQEAMEKILKEHEIDIVVSTVGG-----ESILDQIALVKAMKAVGTIKRFLPSEFGH 122
Query: 120 DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKD 179
D + A+ +EPG + +K VR+ +E++GIPFTY+ N A + P +LP D
Sbjct: 123 DVNR-ADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTD 181
Query: 180 SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239
+ GDGN KA +V DI +TMK ++D RTLN++++ RP N L+ E+ WEK I
Sbjct: 182 FFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKI 241
Query: 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEI-GNEGVEASQLYPE 298
G+TL + ++++++ LA+ E V + + +GC NF I G E VE + LYPE
Sbjct: 242 GRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPE 301
Query: 299 IKYTTVEEYLRRYL 312
+ TVEE Y+
Sbjct: 302 DSFRTVEECFGEYI 315
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 328 bits (843), Expect = e-113
Identities = 131/310 (42%), Positives = 189/310 (60%), Gaps = 13/310 (4%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
KSK+LI GGTGY+G +VK SL LGH TYV RP + K +L F+ GA +V G
Sbjct: 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP----NSSKTTLLDEFQSLGAIIVKGE 66
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPA 122
++++ LV +K VDVVI A++ QIL Q K+++AIK AGN+KRFLPS+FG +
Sbjct: 67 LDEHEKLVELMKKVDVVISALAF-----PQILDQFKILEAIKVAGNIKRFLPSDFGVEED 121
Query: 123 KMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV 182
++ NA+ P + K ++R+AIE+A IP+TYVSANCFA YF+ L +P KD +
Sbjct: 122 RI-NALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRP---YDPKDEIT 177
Query: 183 LLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
+ G G K E DI +YT+K DPR LNR + RP NI++Q E++ WEK IGK
Sbjct: 178 VYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKK 237
Query: 243 LQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYT 302
+K + +EE +A KE + + + + +G +++ VEAS LYPE+K+T
Sbjct: 238 FKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKENDVEASTLYPELKFT 297
Query: 303 TVEEYLRRYL 312
T++E L ++
Sbjct: 298 TIDELLDIFV 307
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-29
Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 30/225 (13%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M K+ I G TG G + ++ G+E VL R D ++ + A +V
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-----DSSRLPSEG---PRPAHVVV 52
Query: 61 GSFNDYQSLVNAVKLVDVVICAI-SGVHIRSHQILLQ--LKLVDAIKEAGNVKRFLP-SE 116
G + V D VI + + + ++ + +V A+K G V + + +
Sbjct: 53 GDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTS 111
Query: 117 FGT--DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSI 174
DP K+ ++ DD + + K + ++G+ + V +
Sbjct: 112 AFLLWDPTKVPPRLQA---VTDDHIRMHKVLRESGLKYVAVM----PPHIGDQ------- 157
Query: 175 LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYL 219
P + + DG + + + D+ + ++ + + Y
Sbjct: 158 -PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-23
Identities = 56/317 (17%), Positives = 114/317 (35%), Gaps = 32/317 (10%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV 59
++K V++ GGTG G + + L G + V+ R + K + QGA++V
Sbjct: 3 VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-----NPRKKA-AKELRLQGAEVV 56
Query: 60 SGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQ--LKLVDAIKEAGNVKRFLPSEF 117
G +D + A+ + S + ++ L D + G + + S
Sbjct: 57 QGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYS-- 113
Query: 118 GTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPS 177
G + K A FD K V + D G+P T V C+ L P
Sbjct: 114 GLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQ--KAPD 171
Query: 178 KDSVVL-LGDGNPKAIYVDEDDIAMYTMKAINDP-RTLNRTMYLRPPKNILSQREVVETW 235
S +L L G+ + D+ + + P + + + + L + + E
Sbjct: 172 GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCR--HTAEEYAALL 229
Query: 236 EKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEAS-Q 294
K K + + ++ E++ A + ++ + +E + +
Sbjct: 230 TKHTRKVVHDAKMTPEDYEKLGFPG--ARDLANMFRFYA---------LRPDRDIELTLR 278
Query: 295 LYPEIKYTTVEEYLRRY 311
L P+ T++++L ++
Sbjct: 279 LNPKA--LTLDQWLEQH 293
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 2e-21
Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 27/259 (10%)
Query: 6 VLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+ + G TG LG +++ L + + R ++EK + +QG ++ G +
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-----NVEKAS---TLADQGVEVRHGDY 54
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLK-LVDAIKEAGNVKR-FLPSEFGTDP 121
N +SL A V ++ ISG H + +++Q +V A ++AG VK +
Sbjct: 55 NQPESLQKAFAGVSKLL-FISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE 112
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
+ + A + AI IP+T++ + +F+ + S V
Sbjct: 113 SIIPLA--------HVHLATEYAIRTTNIPYTFLRNALYTDFFVNEG--LRASTESGAIV 162
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
G G V +++A+ + + N+T L + + E+ + ++ GK
Sbjct: 163 TNAGSG--IVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP-WTFDELAQILSEVSGK 219
Query: 242 TLQKSSISKEEFLASMKEQ 260
+ +S EE +
Sbjct: 220 KVVHQPVSFEEEKNFLVNA 238
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 1e-20
Identities = 40/267 (14%), Positives = 77/267 (28%), Gaps = 46/267 (17%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYV--LHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
VL+ G +G G+ + K + L R + + + A +
Sbjct: 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----QGKEKI----GGEADVFI 54
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILL-----------------------QL 97
G D S+ A + +D ++ S V Q
Sbjct: 55 GDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114
Query: 98 KLVDAIKEAGNVKRF-LPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156
+DA K AG VK + G K + + D+G P+T +
Sbjct: 115 NQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173
Query: 157 ANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
A G ++ D ++ V D+A ++A+ N+
Sbjct: 174 A---GGLLDKEGGVRELLVGKDDELLQTDTK-----TVPRADVAEVCIQALLFEEAKNKA 225
Query: 217 MYL--RPPKNILSQREVVETWEKLIGK 241
L +P ++ + ++ +
Sbjct: 226 FDLGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 4e-20
Identities = 45/256 (17%), Positives = 94/256 (36%), Gaps = 27/256 (10%)
Query: 5 KVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+++ G TG+LG + ++A ++ R ++EKV + +
Sbjct: 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR-----NVEKVP---DDWRGKVSVRQLDY 53
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLK-LVDAIKEAGNVKRF-LPSEFGTDP 121
+ +S+V A K +D V+ I + S + + +++ LV A K++G V +
Sbjct: 54 FNQESMVEAFKGMDTVV-FIPSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQH 111
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
N + + +GI +TYV + L ++
Sbjct: 112 ---NNPFHMSP----YFGYASRLLSTSGIDYTYVRMAMYMDPLKPYL---PELM--NMHK 159
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
++ G+ + Y+ +DIA + I +P T + L +E+ + G
Sbjct: 160 LIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYS--YDMKELAAILSEASGT 217
Query: 242 TLQKSSISKEEFLASM 257
++ +S E F
Sbjct: 218 EIKYEPVSLETFAEMY 233
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 1e-19
Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 28/258 (10%)
Query: 6 VLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+ I G TG LG ++++ + + + R + K Q + QG + +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVR-----NPAKAQ---ALAAQGITVRQADY 53
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKR-FLPSEFGTDPA 122
D +L +A++ V+ ++ IS + + +++A K AG VK S D +
Sbjct: 54 GDEAALTSALQGVEKLL-LISSSEV-GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADTS 110
Query: 123 KMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV 182
+ A D+ + K + D+GI +T + ++ +L + L + V
Sbjct: 111 PLGLA--------DEHIETEKMLADSGIVYTLLRNGWYSENYLASA---PAAL--EHGVF 157
Query: 183 LLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
+ G+ K D A + I++ + L + ++ K GK
Sbjct: 158 IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSA-WTLTQLAAELTKQSGKQ 216
Query: 243 LQKSSISKEEFLASMKEQ 260
+ ++S+ +F A++K
Sbjct: 217 VTYQNLSEADFAAALKSV 234
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-19
Identities = 42/222 (18%), Positives = 83/222 (37%), Gaps = 37/222 (16%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSF 63
+VL++G G + + L+ GHE + R E E+ L +E+GA +V +
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE-----EQGPEL---RERGASDIVVANL 74
Query: 64 NDYQSLVNAVKLVDVVICAI----SGVHIRSHQILLQ--LKLVDAIKEAGNVKRF-LPSE 116
+ +A +D V+ A ++ I L +K + ++ G +KRF + S
Sbjct: 75 EE--DFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSS 131
Query: 117 FGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSIL- 175
GT R K + ++ + + +T V +PG +
Sbjct: 132 VGTV--DPDQGPMNMRHYLVAKRLADDELKRSSLDYTIV--------------RPGPLSN 175
Query: 176 -PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
S V + + + D+A + ++ T+ +T
Sbjct: 176 EESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKT 217
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 8e-19
Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 31/220 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
VLI+G G + + ++ + + R K+ ++++ G
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFAR-----QPAKIHKPY---PTNSQIIMGDV 76
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPA 122
++ +L A++ D+V ++G + ++ A+K VKR + G
Sbjct: 77 LNHAALKQAMQGQDIVYANLTGEDLDIQAN----SVIAAMKACD-VKRLIFVLSLGIYDE 131
Query: 123 KMANAMEPGRVTF----DDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSK 178
+E AIE +G+ +T + +
Sbjct: 132 VPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILR----PAWLTDE--------DII 179
Query: 179 DSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218
D + + K V +A I+ P
Sbjct: 180 DYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENI 219
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 1e-17
Identities = 41/266 (15%), Positives = 88/266 (33%), Gaps = 19/266 (7%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
+K + ++G TG G L++ + A+GH ++ + L
Sbjct: 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQ 57
Query: 61 GSFNDYQSLV-NAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119
G + L+ + + + +I + L DA K AG ++ ++ + +
Sbjct: 58 GPLLNNVPLMDTLFEGAHLAFINTTSQA--GDEIAIGKDLADAAKRAGTIQHYI---YSS 112
Query: 120 DPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKD 179
P P + K V + G+P T+V A + F + D
Sbjct: 113 MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD 172
Query: 180 SVVLL---GDGNPKAIYVD-EDDIAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVE 233
D + ++D E D+ ++ D + + L LS +V
Sbjct: 173 GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET--LSPVQVCA 230
Query: 234 TWEKLIGKTLQKSSISKEEFLASMKE 259
+ + + + + + K E ++
Sbjct: 231 AFSRALNRRVTYVQVPKVEIKVNIPV 256
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 79.0 bits (195), Expect = 2e-17
Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 44/237 (18%)
Query: 1 MEK-SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV 59
MEK K+++IG +G++G L+ +L G E + R EK + + + K+
Sbjct: 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVR-----HPEK----IKIENEHLKVK 51
Query: 60 SGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLK----LVDAIKEAGNVKRFL-P 114
+ + K D VI A + +K ++D +K+AG V RFL
Sbjct: 52 KADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMV 110
Query: 115 SEFGTDPAKMANAMEPGRVTFDD---------------KMVVRKAIEDAGIPFTYVSANC 159
G+ + PG D + + +++ I + + S
Sbjct: 111 GGAGSLF------IAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS--- 161
Query: 160 FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
+ + G KD +++ GN ++ +D A + + P+
Sbjct: 162 -PAADMRPGVRTGRYRLGKDDMIVDIVGNS---HISVEDYAAAMIDELEHPKHHQER 214
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-16
Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 35/220 (15%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K+ I+G TG +GK L+K+ ++ Y R +E+V K V +
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-----KVEQVPQY-----NNVKAVHFDVD 51
Query: 65 -DYQSLVNAVKLVDVVICAISGVHIRSHQILLQ--LKLVDAIKEAGNVKRFLP-SEFGTD 120
+ + + +D +I ++ L +KL+ A ++A VKRF+ S +
Sbjct: 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110
Query: 121 PAKM---ANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPS 177
+ A ++ + +T + QPG++
Sbjct: 111 QPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTII--------------QPGALTEE 156
Query: 178 KDS-VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
+ + ++ + D + + D+A + + ++ +
Sbjct: 157 EATGLIDINDEVSASNTI--GDVADTIKELVMTDHSIGKV 194
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 4e-14
Identities = 40/226 (17%), Positives = 74/226 (32%), Gaps = 34/226 (15%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K+ IIG TG G R+++ + GHE + R + K+ + ++
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVR-----NAGKITQT----HKDINILQKDIF 52
Query: 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLK-LVDAIKEAGNVKRFL---------- 113
D ++ + +VV+ A + + + L L+ + R L
Sbjct: 53 D--LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQI 109
Query: 114 ---PSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ 170
+ P ++ K+ A +TY+S +
Sbjct: 110 DEDGNTLLESKGLREAPYYPTARAQAKQLEHLKS-HQAEFSWTYIS----PSAMFEPGER 164
Query: 171 PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216
G KD ++ DGN I + +D A+ + I P LN
Sbjct: 165 TGDYQIGKDHLLFGSDGNSF-ISM--EDYAIAVLDEIERPNHLNEH 207
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 6e-13
Identities = 25/213 (11%), Positives = 53/213 (24%), Gaps = 30/213 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+ I+G G + + L L + R ++ + ++ GSF
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGR-----QLKTRIPPEIIDHERVTVIEGSF 61
Query: 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAK 123
+ L AV +VV I V A+ + S G
Sbjct: 62 QNPGXLEQAVTNAEVVFVGAMESGSDMASI------VKALSRXNIRRVIGVSMAGLSGEF 115
Query: 124 MA-----NAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSK 178
+ R + ++ + +T + + P
Sbjct: 116 PVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR----LTWLYND--------PEX 163
Query: 179 DSVVLLGDGNP-KAIYVDEDDIAMYTMKAINDP 210
L+ +G V + + ++
Sbjct: 164 TDYELIPEGAQFNDAQVSREAVVKAIFDILHAA 196
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 64.7 bits (157), Expect = 2e-12
Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 34/228 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K+ ++G TG G +V + GHE + R D +K L GA + +
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR-----DPQKAADRL-----GATVATLVKE 51
Query: 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILL---QLKLVDAIKEAGNVKRFL-------- 113
+ VD V+ A+S L LV ++ +
Sbjct: 52 PLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLA 110
Query: 114 ----PSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLC 169
D + A + + +A + + +S + F G
Sbjct: 111 MPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISP---SEAFPSG-- 165
Query: 170 QPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217
S + KD++++ DG I ++A+ + + P + +
Sbjct: 166 PATSYVAGKDTLLVGEDGQSH-ITT--GNMALAILDQLEHPTAIRDRI 210
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 17/116 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K ++G TG LG +A A GH+ ++HRP + +
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ--------RLAYLEPECRVAEML 66
Query: 65 DYQSLVNAVKLVDVVI-CA-ISGVHIRSHQILLQ------LKLVDAIKEAGNVKRF 112
D+ L A++ +D VI A R Q + A +A V R
Sbjct: 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRI 121
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 19/131 (14%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKL 58
M+ V I+G +G G+ L+K L G + ++ R ++ D E + +
Sbjct: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV--------NQ 67
Query: 59 VSGSFNDYQSLVNAVKLVDVVICAISGVHIRSH-------QILLQLKLVDAIKEAGNVKR 111
F +A + DV C + ++ LK + K G K
Sbjct: 68 EVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKH 126
Query: 112 F-LPSEFGTDP 121
F L S G D
Sbjct: 127 FNLLSSKGADK 137
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 6e-07
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 22/120 (18%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M ++L+ G G LG+ + + + + D+ L + V
Sbjct: 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLA-------DLSP----LDPAGPNEECVQ 49
Query: 61 GSFNDYQSLVNAVKLVDVVI--CAISGVHIRSHQILLQ------LKLVDAIKEAGNVKRF 112
D ++ V D ++ IS + + +LQ L +A + G R
Sbjct: 50 CDLADANAVNAMVAGCDGIVHLGGIS--VEKPFEQILQGNIIGLYNLYEAARAHG-QPRI 106
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 7e-07
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 20/119 (16%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M SK+LI G G LG L + A GHE L R + + G + +
Sbjct: 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRR-----SAQPM-------PAGVQTLI 47
Query: 61 GSFNDYQSLVNAVKL-VDVVICAI-----SGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113
+L + V L ++++ + S H R + + A++ A ++
Sbjct: 48 ADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVF 105
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 8e-06
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 22/117 (18%)
Query: 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
+++L+ G G +G + L HE + ++G E ++V+
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG-----------AAEAHEEIVACDL 51
Query: 64 NDYQSLVNAVKLVDVVI--CAISGVHIRSHQILLQ------LKLVDAIKEAGNVKRF 112
D Q++ + VK D +I +S R +LQ L +A + G R
Sbjct: 52 ADAQAVHDLVKDCDGIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLG-KPRI 105
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 6e-05
Identities = 15/76 (19%), Positives = 22/76 (28%), Gaps = 18/76 (23%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
V I G G +G+ L GHE L R KE +
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVR----------------KEPKPGKRFW--D 190
Query: 65 DYQSLVNAVKLVDVVI 80
+ + DV++
Sbjct: 191 PLNPASDLLDGADVLV 206
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI-----EKVQ--MLLSFKE 53
++ +LI GGTG GK V+ VL I E Q M + F +
Sbjct: 19 LDNQTILITGGTGSFGKCFVR---------KVLDTTNAKKIIVYSRDELKQSEMAMEFND 69
Query: 54 QGAKLVSGSFNDYQSLVNAVKLVDVVICA 82
+ G D + L A++ VD+ I A
Sbjct: 70 PRMRFFIGDVRDLERLNYALEGVDICIHA 98
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 8e-05
Identities = 33/179 (18%), Positives = 56/179 (31%), Gaps = 25/179 (13%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV--DIEKVQMLLS-FKEQGAK- 57
E S VL+ G G++ +V+ L G++ V G K+ L + +
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYK--V-----RGTARSASKLANLQKRWDAKYPGR 62
Query: 58 ---LVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQ-ILLQ------LKLVDAIKEAG 107
V + +K V S V + ++ L + A
Sbjct: 63 FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATP 122
Query: 108 NVKRF-LPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFL 165
+VKRF L S + A + G D+K ++I+ A Y
Sbjct: 123 SVKRFVLTSSTVS--ALIPKPNVEGIY-LDEKSWNLESIDKAKTLPESDPQKSLWVYAA 178
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 22/133 (16%), Positives = 38/133 (28%), Gaps = 28/133 (21%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHET--YVLHRPEIGVDIEKVQMLLSFKEQGAKL 58
+VL+ G TG G+ L+ L+ R + +L
Sbjct: 3 STPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH--------------PRL 48
Query: 59 VSGSFNDYQSLVNAVKLVDVVICAISGVHIRSH---------QILLQLKLVDAIKEAGNV 109
+ + L +D C + G I+ L L + E G
Sbjct: 49 DNPVGPLAELLPQLDGSIDTAFCCL-GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-A 106
Query: 110 KRF-LPSEFGTDP 121
+ + + S G D
Sbjct: 107 RHYLVVSALGADA 119
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 4e-04
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 22/126 (17%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLH---RPEIGVDIEKVQMLLSFKEQGAKL- 58
K +V + GGTG+LG ++K+ L G Y ++ R + V L + KL
Sbjct: 1 KGRVCVTGGTGFLGSWIIKSLLENG---YSVNTTIRADPE-RKRDVSFLTNLPGASEKLH 56
Query: 59 -VSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVD-----------AIKEA 106
+ ++ S A++ + S + + + + A +
Sbjct: 57 FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEP--EEIVTKRTVDGALGILKACVNS 114
Query: 107 GNVKRF 112
VKRF
Sbjct: 115 KTVKRF 120
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 5e-04
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
+ IIG G +G++L + + G +D+ + + F + +
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG-AVDARAADLS 74
Query: 65 DYQSLVNAVKL-VDVVI 80
V+ DV+
Sbjct: 75 APGEAEKLVEARPDVIF 91
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 6e-04
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 20/128 (15%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVL------HRPEIGVDIEKVQMLLSFKEQ 54
+ LI G G++G L++ L L + L H+ + E ++ +
Sbjct: 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLD---EVRSLVSEKQWS 81
Query: 55 GAKLVSGSFNDYQSLVNAVKLVDVVI--CAISGVH------IRSHQILLQ--LKLVDAIK 104
K + G + NA VD V+ A+ V I S+ + L ++ A +
Sbjct: 82 NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 141
Query: 105 EAGNVKRF 112
+A V+ F
Sbjct: 142 DAK-VQSF 148
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 312 | |||
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 100.0 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 100.0 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 100.0 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 100.0 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.98 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.98 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.98 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.98 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.98 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.98 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.98 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.98 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.98 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.97 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.97 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.97 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.96 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.96 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.95 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.95 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.95 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.94 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.94 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.94 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.93 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.88 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.87 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.86 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.85 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.83 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.83 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.83 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.83 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.83 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.82 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.82 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.82 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.82 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.82 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.81 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.81 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.81 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.81 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.81 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.81 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.81 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.81 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.81 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.81 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.8 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.8 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.8 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.8 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.8 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.8 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.8 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.79 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.79 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.79 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.79 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.79 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.79 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.79 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.79 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.79 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.79 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.79 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.78 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.78 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.78 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.78 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.78 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.78 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.78 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.78 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.78 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.78 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.78 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.78 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.78 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.78 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.78 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.77 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.77 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.77 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.77 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.77 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.77 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.77 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.77 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.77 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.77 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.77 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.77 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.76 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.76 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.76 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.76 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.76 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.76 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.76 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.76 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.76 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.76 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.76 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.76 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.76 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.76 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.76 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.75 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.75 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.75 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.75 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.75 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.75 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.75 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.75 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.75 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.75 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.75 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.75 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.75 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.75 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.75 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.75 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.75 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.75 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.75 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.74 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.74 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.74 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.74 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.74 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.74 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.74 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.74 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.74 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.74 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.73 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.73 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.73 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.73 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.73 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.73 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.73 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.73 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.73 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.73 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.73 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.73 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.73 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.73 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.73 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.73 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.73 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.73 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.73 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.73 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.72 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.72 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.72 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.72 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.71 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.71 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.7 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.7 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.7 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.7 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.7 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.69 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.69 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.69 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.69 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.69 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.69 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.69 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.68 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.68 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.68 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.68 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.68 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.68 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.68 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.68 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.68 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.68 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.67 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.67 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.67 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.67 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.66 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.65 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.65 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.64 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.64 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.62 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.62 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.61 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.61 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.61 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.6 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.59 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.58 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.58 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.58 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.57 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.57 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.56 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.56 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.54 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.53 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.5 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.5 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.47 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.39 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.3 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.29 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.27 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.24 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.16 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.16 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.15 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.13 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.13 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 99.12 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.11 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.07 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 99.06 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.04 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.02 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 99.0 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.99 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.98 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.97 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.97 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.97 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.93 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.92 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.88 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.87 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.82 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.81 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.79 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.74 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.71 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.67 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.59 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.59 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.54 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.45 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.45 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.42 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 98.37 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.35 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.35 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 98.28 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 98.21 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.21 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 98.19 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.19 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.17 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.15 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.11 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 98.11 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 98.1 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.1 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 98.1 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.07 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 98.03 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 98.0 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.99 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.98 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.93 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.89 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.89 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.88 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.88 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.87 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.87 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.86 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.84 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.82 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.81 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.81 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.8 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.8 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.79 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.78 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.78 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.77 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.77 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.76 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.76 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.76 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.75 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.74 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.74 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.73 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.73 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.72 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.72 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.72 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.71 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.71 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.71 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.7 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.69 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.68 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.68 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.67 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.67 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.66 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.66 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.66 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.65 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.64 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.64 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.63 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.62 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.62 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.61 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.6 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.6 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.59 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.59 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.58 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.58 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.57 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.56 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.56 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.56 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 97.56 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.55 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.54 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.54 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.54 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.53 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.52 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.5 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.5 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.5 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.5 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.49 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.49 | |
| 1u8f_O | 335 | GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l | 97.49 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.48 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.48 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.48 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.47 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.47 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.45 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.45 | |
| 3e5r_O | 337 | PP38, glyceraldehyde-3-phosphate dehydrogenase, cy | 97.45 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.44 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.43 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.42 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.42 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.41 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.41 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.41 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.41 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.39 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.39 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.39 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.39 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.38 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.38 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.37 | |
| 3uuw_A | 308 | Putative oxidoreductase with NAD(P)-binding rossm | 97.37 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.37 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.36 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.36 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.36 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.35 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.35 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.34 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.33 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.33 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.33 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 97.33 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.33 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.33 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.32 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.32 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.3 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.3 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.3 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.29 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.29 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.28 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.28 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.28 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.27 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.27 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.26 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 97.26 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.25 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.24 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 97.23 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.23 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 97.23 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.23 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.23 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.23 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.22 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.21 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.21 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 97.2 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.2 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.2 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.2 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.19 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.19 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.19 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.19 |
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=336.18 Aligned_cols=304 Identities=38% Similarity=0.654 Sum_probs=261.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
|++|+||||||||+||++|++.|++.|++|++++|+.+.. +++.+.++.+...+++++++|+.|.+++.++++ ++|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~ 86 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRS-PSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI 86 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCC-HHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCC-hhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence 4457999999999999999999999999999999986443 667766667777899999999999999999999 9999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecc
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSAN 158 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~ 158 (312)
|||+++.. |+..+.+++++|++++++++||+|+||....+ ..+..|..+|+.+|+.+|+++++.+++++++|||
T Consensus 87 Vi~~a~~~-----n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e-~~~~~p~~~y~~sK~~~e~~l~~~g~~~tivrpg 160 (346)
T 3i6i_A 87 VVSTVGGE-----SILDQIALVKAMKAVGTIKRFLPSEFGHDVNR-ADPVEPGLNMYREKRRVRQLVEESGIPFTYICCN 160 (346)
T ss_dssp EEECCCGG-----GGGGHHHHHHHHHHHCCCSEEECSCCSSCTTT-CCCCTTHHHHHHHHHHHHHHHHHTTCCBEEEECC
T ss_pred EEECCchh-----hHHHHHHHHHHHHHcCCceEEeecccCCCCCc-cCcCCCcchHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 99999875 58899999999999987899999999976554 5555666778889999999999999999999999
Q ss_pred cccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 159 CFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
.+++++.+.+..........+.+.++++++.++++++++|+|++++.++.++...++.|+++|+++.+|+.|+++.+++.
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~ 240 (346)
T 3i6i_A 161 SIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKK 240 (346)
T ss_dssp EESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHH
T ss_pred ccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99998876655443233456678889999999999999999999999999988778899998777899999999999999
Q ss_pred hCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccC-CCcccccccCCCCcccCHHHHHHhh
Q 021470 239 IGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIG-NEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
+|+++++..+|.+++.+.+...+.|....+..++.++..|....|+.+ +.+.+.++++|++++++++||++++
T Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t~~~e~l~~~ 314 (346)
T 3i6i_A 241 IGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEY 314 (346)
T ss_dssp HTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCCCHHHHHHHH
T ss_pred HCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcCcHHHHHHHH
Confidence 999999999999999999998888877777788888888877667775 5556788999999999999999976
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=326.45 Aligned_cols=306 Identities=51% Similarity=0.862 Sum_probs=250.3
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCC-ChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-DIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+ ||+|+||||||++|++++++|+++|++|++++|+.+.. .+++.+.+..+...+++++++|+.|++++.++++++|+
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 80 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV 80 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence 66 78999999999999999999999999999999986543 24555444555677999999999999999999999999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecc
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSAN 158 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~ 158 (312)
|||+++... +..+.+++++|+++|++++||+|++|..... ..+..|..++|.+|..+|+++++.+++++++||+
T Consensus 81 vi~~a~~~~-----~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~ 154 (308)
T 1qyc_A 81 VISTVGSLQ-----IESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 154 (308)
T ss_dssp EEECCCGGG-----SGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred EEECCcchh-----hhhHHHHHHHHHhcCCCceEeecccccCccc-cccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999998754 6778999999999876899999999865443 2333343456689999999999999999999999
Q ss_pred cccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 159 CFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
.|++++.+.+..........+.+.++++++.++++++++|+|++++.++.++...++.+++.|+++.+|++|+++.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~ 234 (308)
T 1qyc_A 155 CFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK 234 (308)
T ss_dssp EEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred eeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHH
Confidence 99998776554432222345677888888999999999999999999999887678889998776799999999999999
Q ss_pred hCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 239 IGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
+|+++++..+|.+++.+.+...++|+...+..++.++..|....|..++.+.+.++++|+++++|+|||+++++
T Consensus 235 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~t~~~~l~~~~ 308 (308)
T 1qyc_A 235 IDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 308 (308)
T ss_dssp TTSCCEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTTEEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred hCCCCceEeCCHHHHHHHHhcCCCchhhHHHhhhheeecCcccccccCCccccHHhhCCCcccccHHHHHHHhC
Confidence 99999999999999999998888777665555666665555434555444445678899999999999999875
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=325.77 Aligned_cols=311 Identities=58% Similarity=0.990 Sum_probs=250.8
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+ ||+|+||||||++|++++++|+++|++|++++|+.+...+++.+.+..+...+++++++|+.|++++.++++++|+|
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~v 80 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV 80 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence 66 68999999999999999999999999999999986554345554444455678999999999999999999999999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccc
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANC 159 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~ 159 (312)
||+++.... ..|+..+.+++++|+++|++++||+|+||......+.+..|..++|.+|..+|+++++.+++++++||+.
T Consensus 81 i~~a~~~~~-~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~ 159 (313)
T 1qyd_A 81 ISALAGGVL-SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNM 159 (313)
T ss_dssp EECCCCSSS-STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCE
T ss_pred EECCccccc-hhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEece
Confidence 999987642 3468889999999999866899999988865432123334445566999999999999999999999999
Q ss_pred ccccccccCCCCC-ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 160 FAGYFLGGLCQPG-SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
|++++.+.+.... ......+.+.++++++.++++++++|+|++++.++.++...++.|++.|+++.+|+.|+++.+++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~ 239 (313)
T 1qyd_A 160 FAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 239 (313)
T ss_dssp EHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHH
T ss_pred eccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHh
Confidence 9998776544321 111344566677888899999999999999999999887678889998776799999999999999
Q ss_pred hCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 239 IGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
+|+++++..+|.+++.+.+...++|+......++.++..+....|...+++.+..+++|+++++|++||+++++
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~t~~~~l~~~~ 313 (313)
T 1qyd_A 240 SEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 313 (313)
T ss_dssp HTCCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSSEEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred cCCCCceEECCHHHHHHHHhcCCCcccchhhheeeEEecccccCCCcCcccccHhhcCCCcccccHHHHHHhhC
Confidence 99999999999999999888777776655555666665554333554444345678899999999999999875
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-46 Score=317.07 Aligned_cols=303 Identities=42% Similarity=0.739 Sum_probs=246.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC-CCCCh-HHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE-IGVDI-EKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
||+|+||||||+||++++++|+++|++|++++|+. +...+ ++.+.++.+...+++++++|+.|++++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999985 22223 55544445556789999999999999999999999999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccc
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCF 160 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~ 160 (312)
|+++... +..+.+++++|+++|++++||+|++|..... ..+..|..+.|.+|..+|+++++.+++++++||+.|
T Consensus 82 ~~a~~~~-----~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~ 155 (307)
T 2gas_A 82 CAAGRLL-----IEDQVKIIKAIKEAGNVKKFFPSEFGLDVDR-HDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAF 155 (307)
T ss_dssp ECSSSSC-----GGGHHHHHHHHHHHCCCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEE
T ss_pred ECCcccc-----cccHHHHHHHHHhcCCceEEeecccccCccc-ccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEccee
Confidence 9999765 7788999999999876899999998865433 233334334558999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 161 AGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
++++.+.+..........+.+.++++++.++++++++|+|++++.++.++...++.+++.|+++.+|++|+++.+++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 235 (307)
T 2gas_A 156 TGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG 235 (307)
T ss_dssp TTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred eccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhC
Confidence 99877655443212234556777888889999999999999999999988767888899877678999999999999999
Q ss_pred CcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCccc-ccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLT-NFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
+++++..+|.+++.+.+...++|+...+..++.++..|... .|..++ +.+.++++|+++++|+|||+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~t~~~~l~~~~ 307 (307)
T 2gas_A 236 KTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAK-DIEASEAYPDVTYTTADEYLNQFV 307 (307)
T ss_dssp SCCEEEEECHHHHHHHHHHBCTTHHHHHHHHHHHHTSCTTCCCCCTTT-EEEHHHHCTTCCCCCHHHHHGGGC
T ss_pred CCCceeecCHHHHHHHHhcCCCchhHHHHHHHHHeecCcccCCCCcCC-CcchHhhCCCCccccHHHHHHHhC
Confidence 99999999999999999888888766555666666555433 344433 345688999999999999999875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=315.12 Aligned_cols=303 Identities=36% Similarity=0.664 Sum_probs=243.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC-CCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE-IGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
||+|+||||||++|++++++|+++|++|++++|+. +...+++.+.+..+...+++++++|+.|++++.++++++|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999985 33224455444445567899999999999999999999999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccc
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFA 161 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~ 161 (312)
+++... +..+++++++|+++|++++||+|++|..... ..+..|..+.|.+|..+|+++++.+++++++||+.|+
T Consensus 84 ~a~~~~-----~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~ 157 (321)
T 3c1o_A 84 ALPFPM-----ISSQIHIINAIKAAGNIKRFLPSDFGCEEDR-IKPLPPFESVLEKKRIIRRAIEAAALPYTYVSANCFG 157 (321)
T ss_dssp CCCGGG-----SGGGHHHHHHHHHHCCCCEEECSCCSSCGGG-CCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred CCCccc-----hhhHHHHHHHHHHhCCccEEeccccccCccc-cccCCCcchHHHHHHHHHHHHHHcCCCeEEEEeceec
Confidence 998754 6788999999999876899999988865432 2222222334589999999999999999999999999
Q ss_pred ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 162 GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+++.+.+.........++.+..+++++..+++++++|+|++++.++.++...++.|++.|+++.+|++|+++.+++.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 158 AYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237 (321)
T ss_dssp HHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence 98765433321111345567778888899999999999999999999887678888998776799999999999999999
Q ss_pred cceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
++++..+|.+++.+.+...++|+...+..++.++..+....|..++.+.+.++++|+++++|++||++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~ 307 (321)
T 3c1o_A 238 SFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKDDIEASNLYPELEFTSIDGLLDLF 307 (321)
T ss_dssp CCCEEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTTCTTTSSCCCSSCEEGGGTCTTCCCCCHHHHHHHH
T ss_pred cceeeeCCHHHHHHHHhcCCCchhhhHhhhheeeeccccCCCCCCcccchHhhhCCCCccccHHHHHHHH
Confidence 9999999999999999888888765555555555555433355444334567888999999999999975
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=313.58 Aligned_cols=295 Identities=44% Similarity=0.745 Sum_probs=240.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
++|+||||||++|++++++|+++|++|++++|+.+. +.+.+..+...+++++++|+.|++++.++++++|+|||++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~----~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSS----KTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCS----CHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCc----hhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 489999999999999999999999999999998542 2222233446789999999999999999999999999999
Q ss_pred CCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccccc
Q 021470 84 SGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGY 163 (312)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~~~ 163 (312)
+... +..+++++++|++++++++||+|+||..... ..+..|..++|.+|..+|+++++.+++++++||+.|+++
T Consensus 88 ~~~~-----~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~-~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 88 AFPQ-----ILDQFKILEAIKVAGNIKRFLPSDFGVEEDR-INALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASY 161 (318)
T ss_dssp CGGG-----STTHHHHHHHHHHHCCCCEEECSCCSSCTTT-CCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEHHH
T ss_pred chhh-----hHHHHHHHHHHHhcCCCCEEEeeccccCccc-ccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceehhh
Confidence 8654 6778999999999876899999998864432 222222234568999999999999999999999999998
Q ss_pred ccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 164 FLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+.+.+.... ...+.+.++++++..+++++++|+|++++.++.++...++.+++.|+++.+|+.|+++.+++.+|+++
T Consensus 162 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 162 FINYLLRPY---DPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp HHHHHHCTT---CCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hhhhhcccc---CCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCC
Confidence 765443321 24556777888889999999999999999999988767888899877779999999999999999999
Q ss_pred eeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 244 QKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
++..+|.+++.+.+...++|....+..++.++..|...+|..++++..+.+++|+++++|+|||++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~ 306 (318)
T 2r6j_A 239 KKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKENDVEASTLYPELKFTTIDELLDIF 306 (318)
T ss_dssp EEEEECHHHHHHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTTCEEGGGTCTTCCCCCHHHHHHHH
T ss_pred ceeecCHHHHHHHHhcCCCcchhhhheeeeEEecCCCCCCCcccccchHHHhCCCCccccHHHHHHHH
Confidence 99999999999988888887766555566666555543355544345678899999999999999975
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=272.82 Aligned_cols=277 Identities=20% Similarity=0.245 Sum_probs=213.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|+||||||||+||+++++.|++. |++|++++|+. ++. ..+...+++++++|+.|++++.++++++|+|||+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~-----~~~---~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNV-----EKV---PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSG-----GGS---CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCH-----HHH---HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 47999999999999999999998 89999999983 332 3345679999999999999999999999999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccc
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFA 161 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~ 161 (312)
++.......|+..+++++++|++++ +++||+ |+++..... | ......+..+|+.+++.+++++++||+.++
T Consensus 73 a~~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~------~-~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~ 144 (289)
T 3e48_A 73 PSIIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNN------P-FHMSPYFGYASRLLSTSGIDYTYVRMAMYM 144 (289)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTC------C-STTHHHHHHHHHHHHHHCCEEEEEEECEES
T ss_pred CCCCccchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCC------C-CccchhHHHHHHHHHHcCCCEEEEeccccc
Confidence 9987665678899999999999999 999997 776643221 1 222334557888888999999999999999
Q ss_pred ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 162 GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+++...+... . .......+.++..+++++++|+|++++.++.++...+++|++. ++.+|+.|+++.+++.+|+
T Consensus 145 ~~~~~~~~~~----~-~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~--~~~~s~~e~~~~~~~~~g~ 217 (289)
T 3e48_A 145 DPLKPYLPEL----M-NMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS--GYSYDMKELAAILSEASGT 217 (289)
T ss_dssp TTHHHHHHHH----H-HHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC--CEEEEHHHHHHHHHHHHTS
T ss_pred cccHHHHHHH----H-HCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC--CCcCCHHHHHHHHHHHHCC
Confidence 9865422111 1 1223345567888999999999999999999987668899997 4599999999999999999
Q ss_pred cceeecCCHHHHHHHHHh-cCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 242 TLQKSSISKEEFLASMKE-QNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
++++..++.+++.+.+.. .+++.. +..++.....|. +.... ..+.++ .|.+|++|+||++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~g~---~~~~~--~~~~~~-~G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 218 EIKYEPVSLETFAEMYDEPKGFGAL--LASMYHAGARGL---LDQES--NDFKQL-VNDQPQTLQSFLQEN 280 (289)
T ss_dssp CCEECCCCHHHHHHHTCCSTTHHHH--HHHHHHHHHTTT---TCCCC--SHHHHH-HSSCCCCHHHHHHC-
T ss_pred ceeEEeCCHHHHHHHhcCCccHHHH--HHHHHHHHHCCC---ccccC--chHHHH-hCCCCCCHHHHHHHH
Confidence 999999999999888866 444332 222222222333 22221 233333 489999999999875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=261.66 Aligned_cols=279 Identities=16% Similarity=0.206 Sum_probs=209.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|+|+||||||+||+++++.|+++ |++|++++|+.... ..+...+++++.+|+.|++++.++++++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA--------STLADQGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT--------HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH--------hHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 47999999999999999999998 99999999984322 222346899999999999999999999999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccc
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCF 160 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~ 160 (312)
+++.......|+.++.+++++|++++ +++||+ |+.+.. . . ..+|..+|..+|+++++.+++++++||+.+
T Consensus 73 ~a~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~------~-~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~ 143 (287)
T 2jl1_A 73 ISGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-E------S-IIPLAHVHLATEYAIRTTNIPYTFLRNALY 143 (287)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-G------C-CSTHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred cCCCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C------C-CCchHHHHHHHHHHHHHcCCCeEEEECCEe
Confidence 99864322348999999999999999 999987 554432 1 1 136777999999999999999999999999
Q ss_pred cccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 161 AGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
++++...+... ....+.. ..+.++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+++.+|
T Consensus 144 ~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g 218 (287)
T 2jl1_A 144 TDFFVNEGLRA---STESGAI-VTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSN-QPWTFDELAQILSEVSG 218 (287)
T ss_dssp HHHHSSGGGHH---HHHHTEE-EESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCS-SCBCHHHHHHHHHHHHS
T ss_pred ccccchhhHHH---HhhCCce-eccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCC-CcCCHHHHHHHHHHHHC
Confidence 98763222111 0112233 2455677899999999999999999887656778999754 49999999999999999
Q ss_pred CcceeecCCHHHHHHHHHhcCcccccc--ceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 241 KTLQKSSISKEEFLASMKEQNYAGQVG--LTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
.++++..+|.+++...+...+.|.... +..+...+..+. +..+. .++.+.+ + ++++++|+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~l-G-~~~~l~e~l~~~ 284 (287)
T 2jl1_A 219 KKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGE---ASKTS--DDLQKLI-G-SLTPLKETVKQA 284 (287)
T ss_dssp SCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTT---TCCCC--SHHHHHH-S-SCCCHHHHHHHH
T ss_pred CcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCC---CcCCc--hHHHHHh-C-CCCCHHHHHHHH
Confidence 999999999988877666556554321 111111111111 22222 2444545 5 889999999875
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=261.88 Aligned_cols=286 Identities=18% Similarity=0.231 Sum_probs=208.6
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+ +|+|+||||||++|++++++|+++| ++|++++|+.... +. ..+...+++++++|+.|++++.++++++|+
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~---~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK---AA---KELRLQGAEVVQGDQDDQVIMELALNGAYA 75 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH---HH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH---HH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCE
Confidence 54 4789999999999999999999999 9999999984321 11 233456899999999999999999999999
Q ss_pred EEEcCCCCcc--ccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEe
Q 021470 79 VICAISGVHI--RSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156 (312)
Q Consensus 79 v~~~~~~~~~--~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r 156 (312)
|||+++.... ...|+..+++++++|++++ +++||++|....... .+..+..+|+.+|..+|+++++.+++++++|
T Consensus 76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~--~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilr 152 (299)
T 2wm3_A 76 TFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL--TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVR 152 (299)
T ss_dssp EEECCCHHHHTCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHH--TTTSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEeCCCCccccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcccccc--CCCcccCchhhHHHHHHHHHHHCCCCEEEEe
Confidence 9999985432 2356778999999999999 999998443221111 1112235677899999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCCe-eEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCCCcCCHHHHHHH
Q 021470 157 ANCFAGYFLGGLCQPGSILPSKDS-VVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-TLNRTMYLRPPKNILSQREVVET 234 (312)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~ 234 (312)
|+.+++++...+.... ...+.. ....+.++..+++++++|+|++++.++.++. +.++.|++.| +.+|+.|+++.
T Consensus 153 p~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g--~~~s~~e~~~~ 228 (299)
T 2wm3_A 153 LPCYFENLLSHFLPQK--APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST--CRHTAEEYAAL 228 (299)
T ss_dssp CCEEGGGGGTTTCCEE--CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS--EEECHHHHHHH
T ss_pred ecHHhhhchhhcCCcc--cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee--ccCCHHHHHHH
Confidence 9999998765322210 112222 2223346788999999999999999998763 4577888864 48999999999
Q ss_pred HHHHhCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhh
Q 021470 235 WEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRY 311 (312)
Q Consensus 235 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 311 (312)
+++.+|+++++..+|.+++.+ .|+|....+..+..++..|. .. +..+.+.+ +.+++||+||++++
T Consensus 229 ~~~~~g~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~-g~~~~~~~~~~~~~ 293 (299)
T 2wm3_A 229 LTKHTRKVVHDAKMTPEDYEK----LGFPGARDLANMFRFYALRP----DR---DIELTLRL-NPKALTLDQWLEQH 293 (299)
T ss_dssp HHHHHSSCEEECCCCTHHHHT----TCSTTHHHHHHHHHHHTTCC----CC---CHHHHHHH-CTTCCCHHHHHHHH
T ss_pred HHHHHCCCceeEecCHHHHHh----cCCCcHHHHHHHHHHHHhcC----CC---CHHHHHHh-CCCCCCHHHHHHhC
Confidence 999999999999999987764 36654111222222222221 11 11222333 77899999999875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=254.61 Aligned_cols=277 Identities=18% Similarity=0.225 Sum_probs=203.6
Q ss_pred EEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+||||||+||+++++.|+++ |++|++++|+.... ..+...+++++.+|+.|++++.++++++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA--------QALAAQGITVRQADYGDEAALTSALQGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC--------HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh--------hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 5899999999999999999998 99999999984432 2223468999999999999999999999999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccccc
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFA 161 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~ 161 (312)
++... ..|+..+.+++++|++++ +++||+ |+.+.. . . ..+|..+|..+|+++++.+++++++||+.|+
T Consensus 73 a~~~~--~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~------~-~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~ 141 (286)
T 2zcu_A 73 SSSEV--GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-T------S-PLGLADEHIETEKMLADSGIVYTLLRNGWYS 141 (286)
T ss_dssp C----------CHHHHHHHHHHHHT-CCEEEEEEETTTT-T------C-CSTTHHHHHHHHHHHHHHCSEEEEEEECCBH
T ss_pred CCCCc--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-C------C-cchhHHHHHHHHHHHHHcCCCeEEEeChHHh
Confidence 98642 357889999999999999 999997 554432 1 1 1467779999999999999999999999988
Q ss_pred ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 162 GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+++...+... ...+.+. .+.++..+++++++|+|++++.++.++...++.|++.++ +.+|+.|+++.+++.+|+
T Consensus 142 ~~~~~~~~~~----~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~ 215 (286)
T 2zcu_A 142 ENYLASAPAA----LEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGD-SAWTLTQLAAELTKQSGK 215 (286)
T ss_dssp HHHHTTHHHH----HHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCS-SCBCHHHHHHHHHHHHSS
T ss_pred hhhHHHhHHh----hcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCC-CcCCHHHHHHHHHHHHCC
Confidence 8754221110 1123333 566778899999999999999999887656789999754 489999999999999999
Q ss_pred cceeecCCHHHHHHHHHhcCcccccc--ceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 242 TLQKSSISKEEFLASMKEQNYAGQVG--LTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
++++..+|.+++...+...+.|.... +..+...+..+. +..+. .++.+.+ +.++++++|++++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~l-g~~~~~~~e~l~~~~ 282 (286)
T 2zcu_A 216 QVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGG---LFDDS--KTLSKLI-GHPTTTLAESVSHLF 282 (286)
T ss_dssp CCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTT---TCCCC--CHHHHHH-TSCCCCHHHHHHGGG
T ss_pred CCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC---CccCc--hHHHHHh-CcCCCCHHHHHHHHH
Confidence 99999999988776665445544321 111111111111 12221 2444444 578899999999763
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=251.00 Aligned_cols=234 Identities=16% Similarity=0.186 Sum_probs=184.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+ |+|||||||||||+++++.|+++|++|++++|+.. . . . + .+++++.+|+. .+++.++++++|+||
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~----~---~-~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vi 67 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-N----K---A-I--NDYEYRVSDYT-LEDLINQLNDVDAVV 67 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC-c----c---c-C--CceEEEEcccc-HHHHHHhhcCCCEEE
Confidence 54 79999999999999999999999999999999822 1 1 1 2 28999999999 999999999999999
Q ss_pred EcCCCCccc------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHHHHH
Q 021470 81 CAISGVHIR------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAIED 147 (312)
Q Consensus 81 ~~~~~~~~~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~~~ 147 (312)
|+++..... ..|+.++.+++++|++.+ +++||+ |+ |+.....+ +.+..|...|..+|..+|++++.
T Consensus 68 h~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 146 (311)
T 3m2p_A 68 HLAATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNI 146 (311)
T ss_dssp ECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred EccccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence 999976432 378999999999999999 999887 43 44332111 44556666777799999999876
Q ss_pred ----hCCCeEEEeccccccccccc--CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021470 148 ----AGIPFTYVSANCFAGYFLGG--LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLR 220 (312)
Q Consensus 148 ----~~~~~~i~r~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~ 220 (312)
.+++++++||+.++|+.... +.. .......+..+.++++++..+++++++|+|++++.+++++. .+++|+++
T Consensus 147 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~~i~ 225 (311)
T 3m2p_A 147 YSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTFNIG 225 (311)
T ss_dssp HHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEEEEC
T ss_pred HHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeEEeC
Confidence 68999999999999865431 110 00011345677777889999999999999999999999886 67889997
Q ss_pred CCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 221 PPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 221 ~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
++ +.+|+.|+++.+++.+|.+.++...+.
T Consensus 226 ~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~ 254 (311)
T 3m2p_A 226 SG-DALTNYEVANTINNAFGNKDNLLVKNP 254 (311)
T ss_dssp CS-CEECHHHHHHHHHHHTTCTTCEEECSS
T ss_pred CC-CcccHHHHHHHHHHHhCCCCcceecCC
Confidence 54 599999999999999999877666553
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-35 Score=253.01 Aligned_cols=239 Identities=16% Similarity=0.120 Sum_probs=186.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc----cCCCeEEEccCCCHHHHHHHhccCC
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK----EQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~----~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
++|+|||||||||||+++++.|+++|++|++++|+.... ......+..+. ..+++++++|+.|++++.++++++|
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGH-QYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCc-hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 468999999999999999999999999999999986544 33332211110 1689999999999999999999999
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ ||.....+ +.+..|...|..+|..
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 181 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYV 181 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHH
Confidence 99999997432 1368899999999999999 999987 43 44332211 4455666677779999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccCCCCC-------ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG-------SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|++++. .+++++++||+.++|+......... .....+..+.++++++..++++|++|+|++++.++..
T Consensus 182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 261 (351)
T 3ruf_A 182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA 261 (351)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence 9998874 5999999999999987543211100 0113456677888899999999999999999999987
Q ss_pred -CccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 210 -PRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 210 -~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+...+++|+++++ +.+|+.|+++.+++.+|.+.
T Consensus 262 ~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 262 KDSAKDNIYNVAVG-DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp CGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHTTC
T ss_pred ccccCCCEEEeCCC-CcccHHHHHHHHHHHhCccc
Confidence 4556789999754 59999999999999999853
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=254.30 Aligned_cols=238 Identities=20% Similarity=0.263 Sum_probs=184.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC-CHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN-DYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~l~~~~~~~d~ 78 (312)
|+||+|||||||||||++|+++|+++ |++|++++|+..... ......+++++.+|+. |.+.+.++++++|+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~ 94 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLG-------DLVKHERMHFFEGDITINKEWVEYHVKKCDV 94 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTG-------GGGGSTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhh-------hhccCCCeEEEeCccCCCHHHHHHHhccCCE
Confidence 55789999999999999999999998 899999999854321 1223478999999999 99999999999999
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccC-------CCCCch
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAM-------EPGRVT 134 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~-------~p~~~~ 134 (312)
|||+++..... ..|+.++.+++++|++.+ ++||+ |+ ||...... +++. .|...|
T Consensus 95 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y 172 (372)
T 3slg_A 95 ILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIY 172 (372)
T ss_dssp EEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHH
T ss_pred EEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcH
Confidence 99999976521 267888999999999998 67776 54 44322211 1111 233356
Q ss_pred hhhHHHHHHHHHHh---CCCeEEEecccccccccccCCCC-----------CccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 135 FDDKMVVRKAIEDA---GIPFTYVSANCFAGYFLGGLCQP-----------GSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 135 ~~~K~~~e~~~~~~---~~~~~i~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
..+|..+|++++.. +++++++||+.++|+........ ......+..+.++++++..+++++++|+|
T Consensus 173 ~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 252 (372)
T 3slg_A 173 ACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGI 252 (372)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHH
Confidence 66999999999876 89999999999998764321110 00012456777888889999999999999
Q ss_pred HHHHHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeec
Q 021470 201 MYTMKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
++++.+++++. ..+++|+++++++.+|+.|+++.+++.+|.++++..
T Consensus 253 ~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 301 (372)
T 3slg_A 253 SALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYAD 301 (372)
T ss_dssp HHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHH
T ss_pred HHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccccc
Confidence 99999999875 568899998644699999999999999998765443
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=248.50 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=182.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~ 78 (312)
+|+|||||||||||++|+++|+++| ++|++++|.......... .......+++++++|+.|++.+.+++++ +|+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV--KSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG--TTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh--hhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 6899999999999999999999999 788888876533211111 0111235899999999999999999997 999
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCCCCchhhhHHH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~~ 140 (312)
|||+++..... ..|+.++.+++++|++.+ +++||+ |+ |+.... ..+.+..|...|..+|..
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 180 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS 180 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence 99999975422 378889999999999998 999887 43 443211 114555666677779999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccC--CC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGL--CQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
+|++++. .+++++++||+.++|+..... .. .......+..+.++++++..+++++++|+|++++.++.++. .
T Consensus 181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-~ 259 (346)
T 4egb_A 181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-V 259 (346)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-T
T ss_pred HHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-C
Confidence 9998875 699999999999998643211 00 00011345667788889999999999999999999998876 6
Q ss_pred CceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 214 NRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
+++|+++++ +.+|+.|+++.+.+.+|.+.+
T Consensus 260 g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 260 GEVYNIGGN-NEKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp TCEEEECCS-CCEEHHHHHHHHHHHHTCCGG
T ss_pred CCEEEECCC-CceeHHHHHHHHHHHhCCCcc
Confidence 779999754 489999999999999998754
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=241.06 Aligned_cols=236 Identities=17% Similarity=0.169 Sum_probs=177.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|||||||||||++++++|+++|++|++++|+.... +.+...+++++.+|+.|++++.++++++|+|||+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI--------QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS 84 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG--------GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh--------hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 46999999999999999999999999999999985432 2233458999999999999999999999999999
Q ss_pred CCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCC----CCchhhhHHHHH
Q 021470 83 ISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEP----GRVTFDDKMVVR 142 (312)
Q Consensus 83 ~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p----~~~~~~~K~~~e 142 (312)
++.... ...|+.++.+++++|++++ +++||+ |+ |+.... ..+.+..| ...|..+|..+|
T Consensus 85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e 163 (342)
T 2x4g_A 85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD 163 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHH
T ss_pred CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHH
Confidence 986442 1268999999999999999 999887 43 332221 11334444 456666999999
Q ss_pred HHHHH---hCCCeEEEeccccccccc-c-cCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceE
Q 021470 143 KAIED---AGIPFTYVSANCFAGYFL-G-GLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217 (312)
Q Consensus 143 ~~~~~---~~~~~~i~r~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~ 217 (312)
.+++. .+++++++||+.++|+.. . .+.........+....+ ++..+++++++|+|++++.+++++.. +++|
T Consensus 164 ~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~~~ 239 (342)
T 2x4g_A 164 EQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GERY 239 (342)
T ss_dssp HHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TCEE
T ss_pred HHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-CceE
Confidence 99876 389999999999998754 2 11100000112333333 56788999999999999999987754 7889
Q ss_pred EecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHH
Q 021470 218 YLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFL 254 (312)
Q Consensus 218 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 254 (312)
++.+ ++ +|+.|+++.+.+.+|.+.++ .+|...+.
T Consensus 240 ~v~~-~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~ 273 (342)
T 2x4g_A 240 LLTG-HN-LEMADLTRRIAELLGQPAPQ-PMSMAMAR 273 (342)
T ss_dssp EECC-EE-EEHHHHHHHHHHHHTCCCCE-EECHHHHH
T ss_pred EEcC-Cc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHH
Confidence 9874 55 99999999999999998887 88876543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-34 Score=244.85 Aligned_cols=231 Identities=16% Similarity=0.155 Sum_probs=182.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|||||||||||+++++.|+++|++|++++|+.. ..+++++.+|+.|.+++.++++++|+|||+
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~--------------~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS--------------GTGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC--------------SSCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC--------------CCCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 578999999999999999999999999999999842 157899999999999999999999999999
Q ss_pred CCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCC--ccc---ccccCCCCCchhhhHHHHHHHH
Q 021470 83 ISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTD--PAK---MANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 83 ~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~--~~~---~~~~~~p~~~~~~~K~~~e~~~ 145 (312)
++..... ..|+.++.+++++|++.+ +++||+ |+ ||.. ... .+.+..|...|..+|..+|+++
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 163 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELV 163 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence 9876532 268889999999999998 999987 43 5441 111 1445556666777999999998
Q ss_pred HH----hCCCeEEEeccccc-------------cccccc-------------CCC-CCccCCCCCeeEEeCCCCcceee-
Q 021470 146 ED----AGIPFTYVSANCFA-------------GYFLGG-------------LCQ-PGSILPSKDSVVLLGDGNPKAIY- 193 (312)
Q Consensus 146 ~~----~~~~~~i~r~~~~~-------------~~~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~~~~~- 193 (312)
+. .+++++++||+.++ |+.... +.. .......+..+.++++++..+++
T Consensus 164 ~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 243 (347)
T 4id9_A 164 RFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFR 243 (347)
T ss_dssp HHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCE
T ss_pred HHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCc
Confidence 74 58999999999998 543110 000 00011345667778888888899
Q ss_pred ---eeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 194 ---VDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 194 ---v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++++|+|++++.++.++...+++|+++++ +.+|+.|+++.+++.+|.++++..+|
T Consensus 244 ~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p 301 (347)
T 4id9_A 244 MHITDTRDMVAGILLALDHPEAAGGTFNLGAD-EPADFAALLPKIAALTGLPIVTVDFP 301 (347)
T ss_dssp ECEEEHHHHHHHHHHHHHCGGGTTEEEEESCS-SCEEHHHHHHHHHHHHCCCEEEEECS
T ss_pred cCcEeHHHHHHHHHHHhcCcccCCCeEEECCC-CcccHHHHHHHHHHHhCCCCceeeCC
Confidence 99999999999999998666889999754 59999999999999999988776554
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=238.28 Aligned_cols=244 Identities=18% Similarity=0.224 Sum_probs=185.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
+|+||||||||+||+++++.|+++|++|++++|+.... .+....+......+++++++|+.|++++.++++ ++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK-REAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC-THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch-HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 47999999999999999999999999999999986554 222222233335689999999999999999998 899999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++.... ...|+..+.+++++|++.+ +++||+ |+ ||.....+ +.+..|...|..+|..+|+
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ 162 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHH
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 99997542 1268889999999999998 889887 43 44332211 3445555667779999999
Q ss_pred HHHHh-----CCCeEEEecccccccccccCCCCC-------c-------cCCCCCeeEEeC------CCCcceeeeeHHH
Q 021470 144 AIEDA-----GIPFTYVSANCFAGYFLGGLCQPG-------S-------ILPSKDSVVLLG------DGNPKAIYVDEDD 198 (312)
Q Consensus 144 ~~~~~-----~~~~~i~r~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~------~~~~~~~~v~~~D 198 (312)
+++.. +++++++||+.++|+......... . .......+.+++ +++..++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 242 (341)
T 3enk_A 163 ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 242 (341)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHH
Confidence 98752 489999999999886432111000 0 001224555666 7888999999999
Q ss_pred HHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 199 IAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 199 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+|++++.+++.+ ...+++|++++ ++.+|+.|+++.+++.+|.+.++...+
T Consensus 243 va~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 294 (341)
T 3enk_A 243 LARGHIAALDALERRDASLTVNLGT-GRGYSVLEVVRAFEKASGRAVPYELVA 294 (341)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESC-SCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred HHHHHHHHHHhhhcCCcceEEEeCC-CCceeHHHHHHHHHHHhCCCcceeeCC
Confidence 999999999873 34578899975 459999999999999999987766554
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=231.73 Aligned_cols=218 Identities=13% Similarity=0.117 Sum_probs=172.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|||+|||||| ||||++++++|+++|++|++++|+ +.+. ..+...+++++.+|+.|.+ ++++|+|||
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~-----~~~~---~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~ 69 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN-----PDQM---EAIRASGAEPLLWPGEEPS-----LDGVTHLLI 69 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESC-----GGGH---HHHHHTTEEEEESSSSCCC-----CTTCCEEEE
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcC-----hhhh---hhHhhCCCeEEEecccccc-----cCCCCEEEE
Confidence 3589999998 999999999999999999999998 4333 2334578999999999844 789999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHH--hCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHHHHHh-CCC
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKE--AGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAIEDA-GIP 151 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~--~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~~~~-~~~ 151 (312)
+++..... ...+.+++++|++ .+ +++||+ |+ ||.....+ +.+..|...|..+|..+|+++++. +++
T Consensus 70 ~a~~~~~~---~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 145 (286)
T 3ius_A 70 STAPDSGG---DPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLP 145 (286)
T ss_dssp CCCCBTTB---CHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCC
T ss_pred CCCccccc---cHHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCC
Confidence 99976533 3456899999998 67 899987 43 54432211 445566666777999999999997 999
Q ss_pred eEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHH
Q 021470 152 FTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREV 231 (312)
Q Consensus 152 ~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~ 231 (312)
++++||+.++|+....+... ..+....+.+. +..++++|++|+|++++.+++++. .+++|+++++ +.+|+.|+
T Consensus 146 ~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~~~-~~~s~~e~ 218 (286)
T 3ius_A 146 LHVFRLAGIYGPGRGPFSKL----GKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD-PGAVYNVCDD-EPVPPQDV 218 (286)
T ss_dssp EEEEEECEEEBTTBSSSTTS----SSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEECCS-CCBCHHHH
T ss_pred EEEEeccceECCCchHHHHH----hcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-CCCEEEEeCC-CCccHHHH
Confidence 99999999999865443322 33444555554 578899999999999999999886 5779999754 58999999
Q ss_pred HHHHHHHhCCcce
Q 021470 232 VETWEKLIGKTLQ 244 (312)
Q Consensus 232 ~~~~~~~~g~~~~ 244 (312)
++.+++.+|.+.+
T Consensus 219 ~~~i~~~~g~~~~ 231 (286)
T 3ius_A 219 IAYAAELQGLPLP 231 (286)
T ss_dssp HHHHHHHHTCCCC
T ss_pred HHHHHHHcCCCCC
Confidence 9999999998754
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=238.90 Aligned_cols=224 Identities=16% Similarity=0.151 Sum_probs=178.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc-CCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL-VDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~-~d~v 79 (312)
|+||+||||| +||||+++++.|+++|++|++++|+.... ..+++++++|+.|++++.+++++ +|+|
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 67 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHLRPEIL 67 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGGCCSEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcCCCCEE
Confidence 8889999999 59999999999999999999999984322 46899999999999999999997 9999
Q ss_pred EEcCCCCcc-----ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc---cccCCCCCchhhhHHHHHHHHHH
Q 021470 80 ICAISGVHI-----RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM---ANAMEPGRVTFDDKMVVRKAIED 147 (312)
Q Consensus 80 ~~~~~~~~~-----~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~~~ 147 (312)
||+++.... ...|+.++.+++++|++.+ +++||+ | .||.....+ +.+..|...|..+|..+|++ ++
T Consensus 68 ih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~ 145 (286)
T 3gpi_A 68 VYCVAASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LA 145 (286)
T ss_dssp EECHHHHHHC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GG
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hh
Confidence 999986431 2478999999999999988 999987 4 355433211 44556666677799999999 77
Q ss_pred hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCCCc
Q 021470 148 AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP--RTLNRTMYLRPPKNI 225 (312)
Q Consensus 148 ~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~ 225 (312)
. ++++++||+.++|+....+.... .. . ...++++..+++++++|+|++++.+++++ ...+++|++++ ++.
T Consensus 146 ~-~~~~ilR~~~v~G~~~~~~~~~~---~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~-~~~ 217 (286)
T 3gpi_A 146 A-YSSTILRFSGIYGPGRLRMIRQA---QT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD-NQP 217 (286)
T ss_dssp G-SSEEEEEECEEEBTTBCHHHHHT---TC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC-SCC
T ss_pred c-CCeEEEecccccCCCchhHHHHH---Hh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC-CCC
Confidence 7 99999999999987654322211 11 1 12366778899999999999999999885 45678888864 458
Q ss_pred CCHHHHHHHHHHHhCCcceeec
Q 021470 226 LSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 226 ~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
+|+.|+++.+++.+|.+.++..
T Consensus 218 ~s~~e~~~~i~~~~g~~~~~~~ 239 (286)
T 3gpi_A 218 LPVHDLLRWLADRQGIAYPAGA 239 (286)
T ss_dssp EEHHHHHHHHHHHTTCCCCCSC
T ss_pred CCHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999998865543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=238.30 Aligned_cols=242 Identities=14% Similarity=0.091 Sum_probs=182.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh--CCCeEEEEECCCCCCCh-----HHHHHhhhhccCCCeEEEccCCCHHHHHHH-hc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA--LGHETYVLHRPEIGVDI-----EKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~-----~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~ 74 (312)
+|+|||||||||||+++++.|++ .|++|++++|+...... ++......+...+++++.+|+.|++++.++ ..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 57999999999999999999999 89999999997541100 000011223355789999999999999998 78
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc--cccCCCCCchhhhHHH
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM--ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~--~~~~~p~~~~~~~K~~ 140 (312)
++|+|||+|+..... ..|+.++.+++++|++.+ ++ ||+ | .||...... +.+..|...|..+|..
T Consensus 90 ~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~ 167 (362)
T 3sxp_A 90 HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLC 167 (362)
T ss_dssp CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHH
T ss_pred CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 999999999965421 278999999999999998 77 776 4 355432211 4455666667779999
Q ss_pred HHHHHHHhC--CCeEEEecccccccccccCC------C-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 141 VRKAIEDAG--IPFTYVSANCFAGYFLGGLC------Q-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 141 ~e~~~~~~~--~~~~i~r~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+|.+++... ++++++||+.++|+...... . .......+..+.++++++..+++++++|+|++++.+++.+.
T Consensus 168 ~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~ 247 (362)
T 3sxp_A 168 MDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK 247 (362)
T ss_dssp HHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC
Confidence 999999865 78999999888876432110 0 00011345666777888899999999999999999998875
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
.| +|+++++ +.+|+.|+++.+.+.+| +.++...|.
T Consensus 248 -~g-~~~i~~~-~~~s~~e~~~~i~~~~g-~~~~~~~~~ 282 (362)
T 3sxp_A 248 -SG-VYNVGYS-QARSYNEIVSILKEHLG-DFKVTYIKN 282 (362)
T ss_dssp -CE-EEEESCS-CEEEHHHHHHHHHHHHC-CCEEECCC-
T ss_pred -CC-EEEeCCC-CCccHHHHHHHHHHHcC-CCceEECCC
Confidence 34 8888754 59999999999999999 777776664
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-33 Score=235.91 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=178.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|||||||||||+++++.|+++|++|++++|+.... ......+++++.+|+.|.+ +.+++++ |+|||++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR--------REFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC--------GGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc--------hhhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence 5899999999999999999999999999999985543 2222578999999999998 8888888 9999999
Q ss_pred CCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHHHH
Q 021470 84 SGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAIE 146 (312)
Q Consensus 84 ~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~~ 146 (312)
+..... ..|+.++.+++++|++.+ +++||+ |+ ||.....+ +.+..|...|..+|..+|++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~ 149 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA 149 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 964321 268999999999999999 999887 43 44332111 3455666677779999999886
Q ss_pred H----hCCCeEEEecccccccccccCC--CCCcc-CCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC---CccCCce
Q 021470 147 D----AGIPFTYVSANCFAGYFLGGLC--QPGSI-LPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND---PRTLNRT 216 (312)
Q Consensus 147 ~----~~~~~~i~r~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~---~~~~~~~ 216 (312)
. .+++++++||+.++|+...... ..... ......+..+++++..++++|++|+|++++.++++ +...+++
T Consensus 150 ~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ 229 (312)
T 3ko8_A 150 TYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLA 229 (312)
T ss_dssp HHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEE
T ss_pred HHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcE
Confidence 5 5899999999999987533210 00000 01235667788888999999999999999999987 4445778
Q ss_pred EEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHH
Q 021470 217 MYLRPPKNILSQREVVETWEKLIGKTLQKSSISKE 251 (312)
Q Consensus 217 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 251 (312)
|++++ ++.+|+.|+++.+.+.+|.+.++..+|..
T Consensus 230 ~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 263 (312)
T 3ko8_A 230 LNVGN-VDAVRVLDIAQIVAEVLGLRPEIRLVPST 263 (312)
T ss_dssp EEESC-SSCEEHHHHHHHHHHHHTCCCEEEEC---
T ss_pred EEEcC-CCceeHHHHHHHHHHHhCCCCceeecCcc
Confidence 88875 45999999999999999998887776654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=236.35 Aligned_cols=240 Identities=17% Similarity=0.137 Sum_probs=181.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHHHHHHHhccCC
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
+||+|||||||||||+++++.|+++|++|++++|+.... .++...+ +.+. ..+++++++|+.|.+++.++++++|
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 468999999999999999999999999999999975432 2222211 1111 3688999999999999999999999
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ |+.....+ +.+..|...|..+|..
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 183 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV 183 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 99999997541 1268889999999999998 899886 43 44322111 3344555666679999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccCCCC-C------ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGLCQP-G------SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|.+++. .+++++++||+.++|+........ . .....+..+.++++++..+++++++|+|++++.++..
T Consensus 184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 9998864 589999999999998754321000 0 0012345566778888999999999999999999877
Q ss_pred C-ccCCceEEecCCCCcCCHHHHHHHHHHHh---CCcce
Q 021470 210 P-RTLNRTMYLRPPKNILSQREVVETWEKLI---GKTLQ 244 (312)
Q Consensus 210 ~-~~~~~~~~~~~~~~~~s~~e~~~~~~~~~---g~~~~ 244 (312)
+ ...+++|+++++ +.+|+.|+++.+.+.+ |.+.+
T Consensus 264 ~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 264 GLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYH 301 (352)
T ss_dssp CGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCceEEeCCC-CCccHHHHHHHHHHHHHhcCCCCC
Confidence 3 446788998754 5999999999999999 88755
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=233.75 Aligned_cols=237 Identities=18% Similarity=0.297 Sum_probs=177.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
||+|||||||||||++++++|+++|++|++++|+.... . +.+ ..+++++.+|+.|++++.++++ ++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH-E------DAI-TEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-G------GGS-CTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc-h------hhc-CCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 46999999999999999999999999999999975432 1 222 2378999999999999999998 899999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++.... ...|+.++.+++++|++.+ +++||+ |+ |+.....+ +++..|...|..+|..+|+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 151 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK 151 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHH
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHH
Confidence 99997542 1268889999999999998 899887 44 43321111 3344555667779999999
Q ss_pred HHHH----hCCCeEEEecccccccccccCCC------CCc-----c-CC-CCCeeEEeC------CCCcceeeeeHHHHH
Q 021470 144 AIED----AGIPFTYVSANCFAGYFLGGLCQ------PGS-----I-LP-SKDSVVLLG------DGNPKAIYVDEDDIA 200 (312)
Q Consensus 144 ~~~~----~~~~~~i~r~~~~~~~~~~~~~~------~~~-----~-~~-~~~~~~~~~------~~~~~~~~v~~~D~a 200 (312)
+++. .+++++++||+.++|........ ... . .. ....+.+++ +++..++++|++|+|
T Consensus 152 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva 231 (330)
T 2c20_A 152 MLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231 (330)
T ss_dssp HHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHH
T ss_pred HHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHH
Confidence 9875 48999999999998864211100 000 0 01 223455555 677889999999999
Q ss_pred HHHHHHhcCCcc--CCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 201 MYTMKAINDPRT--LNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 201 ~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++++.+++++.. .+++|++++ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 232 ~a~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 281 (330)
T 2c20_A 232 AAHFLGLKDLQNGGESDFYNLGN-GNGFSVKEIVDAVREVTNHEIPAEVAP 281 (330)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCC-TTCBCHHHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHhccccCCCCCeEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence 999999976532 357888864 559999999999999999887655443
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-33 Score=241.65 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=178.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+|+||||||||+||+++++.|+++| ++|++++|+.... . +.+. ..+++++.+|+.|++++.++++++|+||
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~------~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE-K------INVPDHPAVRFSETSITDDALLASLQDEYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC-G------GGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc-h------hhccCCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence 5789999999999999999999999 9999999975432 1 1122 4578999999999999999999999999
Q ss_pred EcCCCCccc----------cchhHhHHHHHHHHHHh-CCCceeec-CC---CCCCccc-----ccc---cC-CCCCchhh
Q 021470 81 CAISGVHIR----------SHQILLQLKLVDAIKEA-GNVKRFLP-SE---FGTDPAK-----MAN---AM-EPGRVTFD 136 (312)
Q Consensus 81 ~~~~~~~~~----------~~~~~~~~~l~~aa~~~-~~v~~~v~-S~---~g~~~~~-----~~~---~~-~p~~~~~~ 136 (312)
|+++..... ..|+.++.+++++|++. + +++||+ |+ ||..... .+. +. .|..+|..
T Consensus 105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~ 183 (377)
T 2q1s_A 105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSM 183 (377)
T ss_dssp ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------CCCCCCCSSCCCSHHHH
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHH
Confidence 999976421 26788999999999998 7 889887 43 4322110 022 33 45566777
Q ss_pred hHHHHHHHHHH----hCCCeEEEeccccccccc---------cc------CCC-CCccCCCCCeeEEeCCCCcceeeeeH
Q 021470 137 DKMVVRKAIED----AGIPFTYVSANCFAGYFL---------GG------LCQ-PGSILPSKDSVVLLGDGNPKAIYVDE 196 (312)
Q Consensus 137 ~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~---------~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 196 (312)
+|..+|.+++. .+++++++||+.++|+.. .. +.. .......+..+.++++++..++++++
T Consensus 184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v 263 (377)
T 2q1s_A 184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV 263 (377)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH
Confidence 99999998875 489999999999998754 11 000 00001234455567778889999999
Q ss_pred HHHHHH-HHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 197 DDIAMY-TMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 197 ~D~a~~-~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+|+|++ ++.+++.+. .+ +|++++ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus 264 ~Dva~a~i~~~~~~~~-~g-~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p 314 (377)
T 2q1s_A 264 EDVANGLIACAADGTP-GG-VYNIAS-GKETSIADLATKINEITGNNTELDRLP 314 (377)
T ss_dssp HHHHHHHHHHHHHCCT-TE-EEECCC-CCCEEHHHHHHHHHHHHTCCSCCCCCC
T ss_pred HHHHHHHHHHHHhcCC-CC-eEEecC-CCceeHHHHHHHHHHHhCCCCCceeCC
Confidence 999999 999998875 45 888865 459999999999999999887655554
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-31 Score=228.35 Aligned_cols=245 Identities=19% Similarity=0.211 Sum_probs=179.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC------CChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG------VDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|+ |+|+||||||+||++++++|+++|++|++++|+... . ++....+..+...+++++.+|+.|++++.++++
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSL-PESLRRVQELTGRSVEFEEMDILDQGALQRLFK 78 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSS-BHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCccccccccc-HHHHHHHHhccCCceEEEECCCCCHHHHHHHHH
Confidence 54 799999999999999999999999999999986543 2 233322222234678999999999999999998
Q ss_pred --cCCEEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCC-CCch
Q 021470 75 --LVDVVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEP-GRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p-~~~~ 134 (312)
++|+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ ||...... +.+..| ...|
T Consensus 79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y 157 (348)
T 1ek6_A 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY 157 (348)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch
Confidence 89999999997532 1268889999999999988 899887 43 44321111 233344 4556
Q ss_pred hhhHHHHHHHHHHh---C--CCeEEEecccccccccccCCC-------CCc-----c-CC-CCCeeEEeC------CCCc
Q 021470 135 FDDKMVVRKAIEDA---G--IPFTYVSANCFAGYFLGGLCQ-------PGS-----I-LP-SKDSVVLLG------DGNP 189 (312)
Q Consensus 135 ~~~K~~~e~~~~~~---~--~~~~i~r~~~~~~~~~~~~~~-------~~~-----~-~~-~~~~~~~~~------~~~~ 189 (312)
..+|..+|.+++.. + ++++++||+.++|+....... ... . .. .+..+.+++ +++.
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 66999999988752 4 899999999988763211000 000 0 01 344556655 5678
Q ss_pred ceeeeeHHHHHHHHHHHhcCCc-cCC-ceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 190 KAIYVDEDDIAMYTMKAINDPR-TLN-RTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 190 ~~~~v~~~D~a~~~~~~l~~~~-~~~-~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
.++++|++|+|++++.+++++. ..+ ++|++++ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 238 ~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 298 (348)
T 1ek6_A 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYKVVA 298 (348)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEEEEC
T ss_pred EEeeEEHHHHHHHHHHHHhcccccCCceEEEeCC-CCCccHHHHHHHHHHHhCCCCceeeCC
Confidence 8999999999999999997652 334 7888864 458999999999999999887655443
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=236.18 Aligned_cols=236 Identities=16% Similarity=0.222 Sum_probs=177.7
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|+ ||+|||||||||||++++++|+++ |++|++++|+......+. +..+...+++++.+|++|++++.++++++|
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 77 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAILGDRVELVVGDIADAELVDKLAAKAD 77 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGGCSSSEEEEECCTTCHHHHHHHHTTCS
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhH---HhhhccCCeEEEECCCCCHHHHHHHhhcCC
Confidence 66 689999999999999999999998 899999999753221111 123334688999999999999999999999
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc-------------cc--cccC
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA-------------KM--ANAM 128 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~-------------~~--~~~~ 128 (312)
+|||+++.... ...|+.++.+++++|.+.+ + +||+ |+ ||.... .. +.+.
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 99999997641 1268889999999999998 7 7776 43 443210 00 2344
Q ss_pred CCCCchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc--CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.|...|..+|..+|.+++. .+++++++||+.++|+.... +.. .......+..+.++++++..+++++++|+|+
T Consensus 156 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 235 (348)
T 1oc2_A 156 NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHST 235 (348)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHH
Confidence 5556666799999998865 48999999999998865421 000 0000123445667788888999999999999
Q ss_pred HHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 202 YTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 202 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+++.+++.+. .+++|+++++ +.+|+.|+++.+.+.+|.+.
T Consensus 236 ~~~~~~~~~~-~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 236 GVWAILTKGR-MGETYLIGAD-GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp HHHHHHHHCC-TTCEEEECCS-CEEEHHHHHHHHHHHTTCCT
T ss_pred HHHHHhhCCC-CCCeEEeCCC-CCCCHHHHHHHHHHHhCCCc
Confidence 9999997653 5678998754 58999999999999999874
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=229.92 Aligned_cols=234 Identities=16% Similarity=0.210 Sum_probs=176.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|||||||||||+++++.|+++| .++++++..... ......+++++.+|+.| +++.++++++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~--------~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~ 70 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGN--------EEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHI 70 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCC--------GGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCC--------hhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEEC
Confidence 4699999999999999999999999 555565543322 11125678999999999 9999999999999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~ 145 (312)
++..... ..|+.++.+++++|++.+ +++||+ |+ ||.....+ +.+..|...|..+|..+|.++
T Consensus 71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 149 (313)
T 3ehe_A 71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALI 149 (313)
T ss_dssp CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9864321 268999999999999999 889887 43 44322111 345556566777999999988
Q ss_pred HH----hCCCeEEEecccccccccccCCC--CCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021470 146 ED----AGIPFTYVSANCFAGYFLGGLCQ--PGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 146 ~~----~~~~~~i~r~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
+. .+++++++||+.++|+....... ... .......+.++++++..++++|++|+|++++.+++.+ ..+++|+
T Consensus 150 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~n 228 (313)
T 3ehe_A 150 ESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD-ERVNIFN 228 (313)
T ss_dssp HHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC-SSEEEEE
T ss_pred HHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC-CCCceEE
Confidence 64 58999999999999874331000 000 0012356778888999999999999999999999843 3567888
Q ss_pred ecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 219 LRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+++ ++.+|+.|+++.+++.+|.+.++...+
T Consensus 229 i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 258 (313)
T 3ehe_A 229 IGS-EDQIKVKRIAEIVCEELGLSPRFRFTG 258 (313)
T ss_dssp CCC-SCCEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred ECC-CCCeeHHHHHHHHHHHhCCCCceEECC
Confidence 875 459999999999999999987766544
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-32 Score=234.14 Aligned_cols=243 Identities=14% Similarity=0.163 Sum_probs=178.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhcc--CCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVKL--VDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~--~d~v 79 (312)
||+|||||||||||+++++.|+++|++|++++|.......... ..+. ..+++++.+|+.|++++.+++++ +|+|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL---HWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC 77 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH---HHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhh---hhhccCCceEEEEcCCCCHHHHHHHHhccCCCEE
Confidence 4699999999999999999999999999999986422111112 2222 24589999999999999999998 9999
Q ss_pred EEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCc-eeec-CC---CCCCccc-------------------cc
Q 021470 80 ICAISGVHI----------RSHQILLQLKLVDAIKEAGNVK-RFLP-SE---FGTDPAK-------------------MA 125 (312)
Q Consensus 80 ~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~-~~v~-S~---~g~~~~~-------------------~~ 125 (312)
||+++.... ...|+.++.+++++|++.+ ++ +||+ |+ |+..... .+
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~ 156 (347)
T 1orr_A 78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES 156 (347)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence 999997542 1268899999999999998 76 8886 43 4422110 02
Q ss_pred ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCc------cCCCCC-----eeEEeCCCCcc
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGS------ILPSKD-----SVVLLGDGNPK 190 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~ 190 (312)
.+..|...|..+|..+|.+++. .+++++++||+.++|+.......... ....+. ++..+++++..
T Consensus 157 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 236 (347)
T 1orr_A 157 TQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 236 (347)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce
Confidence 2334545566699999998875 48999999999999875321100000 001122 56678888999
Q ss_pred eeeeeHHHHHHHHHHHhcCC-ccCCceEEecCCC-CcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 191 AIYVDEDDIAMYTMKAINDP-RTLNRTMYLRPPK-NILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~-~~~~~~~~~~~~~-~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+++++++|+|++++.++.++ ...+++|++.++. ..+|+.|+++.+.+.+|.++++..+|
T Consensus 237 ~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~ 297 (347)
T 1orr_A 237 RDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP 297 (347)
T ss_dssp EECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred EeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCC
Confidence 99999999999999999863 3456789987543 14999999999999999887665554
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=231.65 Aligned_cols=242 Identities=14% Similarity=0.120 Sum_probs=176.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v 79 (312)
.+|+|||||||||||++++++|+++|++|++++|+..... ....... ...+++++++|+.|++++.+++++ +|+|
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 84 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP-SLFETAR--VADGMQSEIGDIRDQNKLLESIREFQPEIV 84 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS-CHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccc-hhhHhhc--cCCceEEEEccccCHHHHHHHHHhcCCCEE
Confidence 3579999999999999999999999999999999854431 1111101 145789999999999999999986 8999
Q ss_pred EEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCCCCchhhhHHHH
Q 021470 80 ICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 80 ~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~~~ 141 (312)
||+++.... ...|+.++.+++++|.+.+.+++||+ |+ ||.... ..+.+..|...|..+|..+
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 164 (357)
T 1rkx_A 85 FHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA 164 (357)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred EECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHH
Confidence 999985421 12688899999999998854788886 44 443211 1022445556677799999
Q ss_pred HHHHHHh-------------CCCeEEEeccccccccccc---CCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 142 RKAIEDA-------------GIPFTYVSANCFAGYFLGG---LCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 142 e~~~~~~-------------~~~~~i~r~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|++++.. +++++++||+.++|+.... +..... ....+..+. +++++..++++|++|+|++++
T Consensus 165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~ 243 (357)
T 1rkx_A 165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYL 243 (357)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHH
Confidence 9988653 8999999999999864311 000000 012233443 445678899999999999999
Q ss_pred HHhcC----CccCCceEEecCC-CCcCCHHHHHHHHHHHhCCcceeec
Q 021470 205 KAIND----PRTLNRTMYLRPP-KNILSQREVVETWEKLIGKTLQKSS 247 (312)
Q Consensus 205 ~~l~~----~~~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~ 247 (312)
.++.. +...+++|+++++ ++.+|+.|+++.+.+.+|.+.++..
T Consensus 244 ~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 291 (357)
T 1rkx_A 244 LLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL 291 (357)
T ss_dssp HHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred HHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc
Confidence 98874 2345778998753 3589999999999999998866543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=232.05 Aligned_cols=235 Identities=14% Similarity=0.141 Sum_probs=181.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|||||||||||+++++.|+++|++|++++|+.... ..+...+++++.+|+.|.+++.++++++|+|||+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~ 100 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH--------MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL 100 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS--------SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc--------hhhccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence 67999999999999999999999999999999985432 1122458999999999999999999999999999
Q ss_pred CCCCcc-----c------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc--------cccc--cCCCCCchhhh
Q 021470 83 ISGVHI-----R------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA--------KMAN--AMEPGRVTFDD 137 (312)
Q Consensus 83 ~~~~~~-----~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~--------~~~~--~~~p~~~~~~~ 137 (312)
++.... . ..|+.++.+++++|++.+ +++||+ |+ |+.... ..+. +..|...|..+
T Consensus 101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s 179 (379)
T 2c5a_A 101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE 179 (379)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence 986532 1 268889999999999998 889887 43 332110 0011 34455566679
Q ss_pred HHHHHHHHHH----hCCCeEEEecccccccccccCCCC------Cc-cCCCCCe-eEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 138 KMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQP------GS-ILPSKDS-VVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 138 K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~------~~-~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|.+++. .+++++++||+.++|+........ .. ....+.. +.++++++..+++++++|+|++++.
T Consensus 180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~ 259 (379)
T 2c5a_A 180 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR 259 (379)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHH
Confidence 9999988864 589999999999998753321100 00 0012333 6778888889999999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+++++ .+++|+++++ +.+|+.|+++.+.+.+|.+.++..+|
T Consensus 260 ~l~~~--~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p 300 (379)
T 2c5a_A 260 LTKSD--FREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIP 300 (379)
T ss_dssp HHHSS--CCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred Hhhcc--CCCeEEeCCC-CccCHHHHHHHHHHHhCCCCceeeCC
Confidence 99876 4678899754 59999999999999999887665554
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=217.40 Aligned_cols=211 Identities=18% Similarity=0.215 Sum_probs=157.8
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+ ||+|+||||||+||+++++.|+++|++|++++|+.. +. ..+ ..+++++++|+.|++++.++++++|+|
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~---~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v 71 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE-----KI---KIE-NEHLKVKKADVSSLDEVCEVCKGADAV 71 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG-----GC---CCC-CTTEEEECCCTTCHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc-----cc---hhc-cCceEEEEecCCCHHHHHHHhcCCCEE
Confidence 65 589999999999999999999999999999999833 22 222 268999999999999999999999999
Q ss_pred EEcCCCCcc----ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCccc-----ccccCCCCCchhhhHHHHHHHHH---
Q 021470 80 ICAISGVHI----RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAK-----MANAMEPGRVTFDDKMVVRKAIE--- 146 (312)
Q Consensus 80 ~~~~~~~~~----~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~-----~~~~~~p~~~~~~~K~~~e~~~~--- 146 (312)
||+++.... ...|+..+.+++++|++++ +++||+ |+.+..... .+.+..|...|..+|...|.+++
T Consensus 72 i~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~ 150 (227)
T 3dhn_A 72 ISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLM 150 (227)
T ss_dssp EECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGG
T ss_pred EEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 999987532 2368999999999999999 999987 654432211 14455565666669999996655
Q ss_pred -HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCc
Q 021470 147 -DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNI 225 (312)
Q Consensus 147 -~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (312)
+.+++++++||+.++++...... . ..+....+. .++. +++++++|+|++++.+++++...+++|+++++. +
T Consensus 151 ~~~~~~~~ilrp~~v~g~~~~~~~-~----~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~-~ 222 (227)
T 3dhn_A 151 KEKEIDWVFFSPAADMRPGVRTGR-Y----RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLE-H 222 (227)
T ss_dssp GCCSSEEEEEECCSEEESCCCCCC-C----EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCS-C
T ss_pred hccCccEEEEeCCcccCCCccccc-e----eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeeh-h
Confidence 35789999999998876432110 0 111112212 1222 799999999999999999999899999998765 7
Q ss_pred CCHH
Q 021470 226 LSQR 229 (312)
Q Consensus 226 ~s~~ 229 (312)
.+++
T Consensus 223 ~~~~ 226 (227)
T 3dhn_A 223 HHHH 226 (227)
T ss_dssp CC--
T ss_pred cccC
Confidence 7765
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-31 Score=223.69 Aligned_cols=220 Identities=14% Similarity=0.141 Sum_probs=176.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+||||||||+||+++++.|+++|++|++++|. ++|+.|.+.+.++++ ++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 599999999999999999999999999999995 479999999999998 7999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~ 144 (312)
+++..... ..|+.++.+++++|++.+ + ++|+ |+ |+.....+ +++..|...|..+|..+|++
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 140 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQF 140 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99976521 268889999999999999 7 5665 43 44322111 45556667777799999999
Q ss_pred HHHhCCCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCC
Q 021470 145 IEDAGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPK 223 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~ 223 (312)
++....+++++||+.++|+....+..... ....+..+.+.+ +..++++|++|+|++++.+++++. +++|+++++
T Consensus 141 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~- 215 (287)
T 3sc6_A 141 VKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNT- 215 (287)
T ss_dssp HHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCB-
T ss_pred HHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCC-
Confidence 99988899999999998864332211100 113355666665 478899999999999999999886 678888754
Q ss_pred CcCCHHHHHHHHHHHhCCcceeecCCHHHH
Q 021470 224 NILSQREVVETWEKLIGKTLQKSSISKEEF 253 (312)
Q Consensus 224 ~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 253 (312)
+.+|+.|+++.+++.+|.+.++.+++.+++
T Consensus 216 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 245 (287)
T 3sc6_A 216 GSCSWFEFAKKIFSYANMKVNVLPVSTEEF 245 (287)
T ss_dssp SCEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred CcccHHHHHHHHHHHcCCCcceeeeehhhc
Confidence 489999999999999999988888887654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.6e-31 Score=225.93 Aligned_cols=233 Identities=19% Similarity=0.216 Sum_probs=176.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+||||||+|+||++++++|+++|++|++++|..... . ..+ ..+++++++|+.|++++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~------~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK-R------ENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC-G------GGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc-h------hhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 4899999999999999999999999999998853322 1 112 2478899999999999999998 8999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC----CCC-Ccc---cccccCCCCCchhhhHHHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE----FGT-DPA---KMANAMEPGRVTFDDKMVVR 142 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~----~g~-~~~---~~~~~~~p~~~~~~~K~~~e 142 (312)
+++.... ...|+.++.+++++|++.+ ++++|+ |+ ||. ... ..+.+..|...|..+|..+|
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e 151 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE 151 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence 9987542 1268889999999999988 889886 44 343 111 11334445566667999999
Q ss_pred HHHHH----hCCCeEEEecccccccccccCCCCC-----c-cCCCCCeeEEe-----CCCCcceeeeeHHHHHHHHHHHh
Q 021470 143 KAIED----AGIPFTYVSANCFAGYFLGGLCQPG-----S-ILPSKDSVVLL-----GDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 143 ~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~-----~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+++. .+++++++||+.++|+......... . ....+..+.++ ++++..++++|++|+|++++.++
T Consensus 152 ~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 231 (311)
T 2p5y_A 152 HYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALAL 231 (311)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHH
Confidence 98864 5899999999999886532211000 0 00124455566 77788899999999999999998
Q ss_pred cCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 208 NDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+.+ ++.|++++ ++.+|+.|+++.+.+.+|.++++...|
T Consensus 232 ~~~---~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 269 (311)
T 2p5y_A 232 FSL---EGIYNVGT-GEGHTTREVLMAVAEAAGKAPEVQPAP 269 (311)
T ss_dssp HHC---CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred hCC---CCEEEeCC-CCCccHHHHHHHHHHHhCCCCCceeCC
Confidence 764 67888875 459999999999999999887655444
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=224.41 Aligned_cols=233 Identities=16% Similarity=0.210 Sum_probs=178.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEcc-CCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGS-FNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D-~~d~~~l~~~~~~~d~v~ 80 (312)
+|+|+||||||+||+++++.|+++|++|++++|+.+.. +. +.+. ..+++++.+| ++|++++.++++++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~---~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi 78 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---IA---EELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF 78 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---HH---HHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh---hH---HHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence 47899999999999999999999999999999985431 11 1122 2478999999 999999999999999999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccc
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANC 159 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~ 159 (312)
|+++... ...|... ++++++|++++.+++||+ |+.+... ..+ .+..+|+.+|..+|+++++.+++++++||++
T Consensus 79 ~~a~~~~-~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~---~~~-~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg~ 152 (352)
T 1xgk_A 79 INTTSQA-GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSL---YGP-WPAVPMWAPKFTVENYVRQLGLPSTFVYAGI 152 (352)
T ss_dssp ECCCSTT-SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGG---TSS-CCCCTTTHHHHHHHHHHHTSSSCEEEEEECE
T ss_pred EcCCCCC-cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccc---cCC-CCCccHHHHHHHHHHHHHHcCCCEEEEecce
Confidence 9987642 2345555 999999998864789887 5433111 111 2336788899999999999999999999998
Q ss_pred ccccccccCCCCCccC-CCCCee--EEeCCCCcceeeeeH-HHHHHHHHHHhcCCc--cCCceEEecCCCCcCCHHHHHH
Q 021470 160 FAGYFLGGLCQPGSIL-PSKDSV--VLLGDGNPKAIYVDE-DDIAMYTMKAINDPR--TLNRTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~v~~-~D~a~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~ 233 (312)
|++++........... ...+.. .++++++..++++++ +|+|++++.++.++. ..+++|+++ + +.+|+.|+++
T Consensus 153 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~-~-~~~s~~e~~~ 230 (352)
T 1xgk_A 153 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT-F-ETLSPVQVCA 230 (352)
T ss_dssp EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEEC-S-EEECHHHHHH
T ss_pred ecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEe-c-CCCCHHHHHH
Confidence 8776543322111111 122332 346667889999999 899999999998752 357899997 4 4899999999
Q ss_pred HHHHHhCCcceeecCC
Q 021470 234 TWEKLIGKTLQKSSIS 249 (312)
Q Consensus 234 ~~~~~~g~~~~~~~~~ 249 (312)
.+++.+|+++++.++|
T Consensus 231 ~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 231 AFSRALNRRVTYVQVP 246 (352)
T ss_dssp HHHHHHTSCEEEEECS
T ss_pred HHHHHHCCCCceEECC
Confidence 9999999998888777
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.1e-31 Score=231.67 Aligned_cols=245 Identities=22% Similarity=0.254 Sum_probs=176.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEECCCCCCC-------hHHH-HHhhhhcc----CC---CeEEEccCCCH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASL-ALGHETYVLHRPEIGVD-------IEKV-QMLLSFKE----QG---AKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-------~~~~-~~~~~l~~----~~---~~~v~~D~~d~ 66 (312)
.|+|||||||||||++++++|+ ++|++|++++|+..... .+.. ..++.+.. .+ ++++.+|+.|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 99999999999754310 0111 00112211 24 89999999999
Q ss_pred HHHHHHhc--c-CCEEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCc-------c
Q 021470 67 QSLVNAVK--L-VDVVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDP-------A 122 (312)
Q Consensus 67 ~~l~~~~~--~-~d~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~-------~ 122 (312)
+++.++++ + +|+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ |+... .
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccc
Confidence 99999998 6 9999999997642 1268899999999999998 899886 43 43322 1
Q ss_pred cc---cccCCCCCchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc-----------CCCCCc-----cCCCC-
Q 021470 123 KM---ANAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG-----------LCQPGS-----ILPSK- 178 (312)
Q Consensus 123 ~~---~~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~-----------~~~~~~-----~~~~~- 178 (312)
.. +.+..|...|..+|..+|.+++. .+++++++||+.++|+.... +..... ....+
T Consensus 161 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T 1gy8_A 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (397)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred cCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence 11 33344556666799999998875 48999999999998764211 000000 00122
Q ss_pred -----------CeeEEeC------CCCcceeeeeHHHHHHHHHHHhcCCccC-----C---ceEEecCCCCcCCHHHHHH
Q 021470 179 -----------DSVVLLG------DGNPKAIYVDEDDIAMYTMKAINDPRTL-----N---RTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 179 -----------~~~~~~~------~~~~~~~~v~~~D~a~~~~~~l~~~~~~-----~---~~~~~~~~~~~~s~~e~~~ 233 (312)
..+.+++ +++..+++||++|+|++++.+++.+... + ++|++++ ++.+|+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~ 319 (397)
T 1gy8_A 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT-SRGYSVREVIE 319 (397)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC-SCCEEHHHHHH
T ss_pred ccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC-CCcccHHHHHH
Confidence 2455665 6778899999999999999999765422 2 6888864 55899999999
Q ss_pred HHHHHhCCcceeecCC
Q 021470 234 TWEKLIGKTLQKSSIS 249 (312)
Q Consensus 234 ~~~~~~g~~~~~~~~~ 249 (312)
.+.+.+|.++++...+
T Consensus 320 ~i~~~~g~~~~~~~~~ 335 (397)
T 1gy8_A 320 VARKTTGHPIPVRECG 335 (397)
T ss_dssp HHHHHHCCCCCEEEEC
T ss_pred HHHHHhCCCCCeeeCC
Confidence 9999999876655443
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.2e-31 Score=225.09 Aligned_cols=232 Identities=14% Similarity=0.104 Sum_probs=177.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v~ 80 (312)
+++|||||||||||+++++.|+++|++|++++|+.... . + +++++.+|+.|++++.+++++ +|+||
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--------~-l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK--------L-P---NVEMISLDIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC--------C-T---TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc--------c-c---eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 57999999999999999999999999999999984321 1 1 788999999999999999986 99999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHh-CCCceeec-CC---CCCC--cccc---cccCCCCCchhhhHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEA-GNVKRFLP-SE---FGTD--PAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~-~~v~~~v~-S~---~g~~--~~~~---~~~~~p~~~~~~~K~~ 140 (312)
|+++.... ...|+.++.+++++|++. + +++||+ |+ |+.. ...+ +.+..|...|..+|..
T Consensus 80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 158 (321)
T 2pk3_A 80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKAS 158 (321)
T ss_dssp ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHH
T ss_pred EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHH
Confidence 99997542 126889999999999876 5 788886 43 4432 1111 3344555667779999
Q ss_pred HHHHHHHh----CCCeEEEecccccccccccC--CCCCc-cCCC---C--CeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 141 VRKAIEDA----GIPFTYVSANCFAGYFLGGL--CQPGS-ILPS---K--DSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 141 ~e~~~~~~----~~~~~i~r~~~~~~~~~~~~--~~~~~-~~~~---~--~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+|.+++.. +++++++||+.++|+..... ..... .... + ..+..+++++..+++++++|+|++++.++.
T Consensus 159 ~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 238 (321)
T 2pk3_A 159 VGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ 238 (321)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHh
Confidence 99998764 89999999999988754321 00000 0011 3 356677888889999999999999999998
Q ss_pred CCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 209 DPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++ ..+++|++.+ ++.+|+.|+++.+.+.+|.+.++...|
T Consensus 239 ~~-~~g~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~p 277 (321)
T 2pk3_A 239 YG-KTGDVYNVCS-GIGTRIQDVLDLLLAMANVKIDTELNP 277 (321)
T ss_dssp HC-CTTCEEEESC-SCEEEHHHHHHHHHHHSSSCCEEEECG
T ss_pred CC-CCCCeEEeCC-CCCeeHHHHHHHHHHHhCCCCceeecc
Confidence 76 3567899875 459999999999999999987766544
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-32 Score=229.95 Aligned_cols=228 Identities=14% Similarity=0.105 Sum_probs=172.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~ 78 (312)
|+||+|||||||||||++++++|+++|+ +.. ....+++.+++|+.|++++.+++++ +|+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------------~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------------EDWVFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------------CEEEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------------ccccccCceecccCCHHHHHHHHhhcCCCE
Confidence 6789999999999999999999999998 221 1123456668999999999999987 999
Q ss_pred EEEcCCCCcc-----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cc----cCCCCC-chh
Q 021470 79 VICAISGVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---AN----AMEPGR-VTF 135 (312)
Q Consensus 79 v~~~~~~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~----~~~p~~-~~~ 135 (312)
|||+++.... ...|+.++.+++++|++.+ +++||+ |+ ||.....+ +. +..|.. +|.
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 143 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYS 143 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHH
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHH
Confidence 9999997541 1378999999999999999 999987 54 44322111 21 344444 355
Q ss_pred hhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCC------c-c----CCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 136 DDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG------S-I----LPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 136 ~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~------~-~----~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.+|..+|++++. .+++++++||+.++|+......... . . ...+..+.++++++..++++|++|+|
T Consensus 144 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 223 (319)
T 4b8w_A 144 YAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLA 223 (319)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHH
Confidence 699999998865 6899999999999987543211000 0 0 13456788889999999999999999
Q ss_pred HHHHHHhcCCc-cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 201 MYTMKAINDPR-TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 201 ~~~~~~l~~~~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++++.++.++. ..+++|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 224 ~a~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 272 (319)
T 4b8w_A 224 QLFIWVLREYNEVEPIILSVGE-EDEVSIKEAAEAVVEAMDFHGEVTFDT 272 (319)
T ss_dssp HHHHHHHHHCCCSSCEEECCCG-GGCEEHHHHHHHHHHHTTCCSCEEEET
T ss_pred HHHHHHHhccccCCceEEEecC-CCceeHHHHHHHHHHHhCCCCcEEeCC
Confidence 99999998754 3456777764 569999999999999999887655443
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=227.69 Aligned_cols=238 Identities=16% Similarity=0.202 Sum_probs=175.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++|+|||||||||||++++++|+++| ++|++++|.......++. ..+. ..+++++.+|+.|++++.+++.++|
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 77 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL---KDLEDDPRYTFVKGDVADYELVKELVRKVD 77 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG---TTTTTCTTEEEEECCTTCHHHHHHHHHTCS
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH---hhhccCCceEEEEcCCCCHHHHHHHhhCCC
Confidence 777899999999999999999999997 899999997432111111 2221 3578999999999999999999999
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
+|||+++.... ...|+.++.+++++|.+.+..++||+ |+ ||...... +.+..|...|..+|..
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 157 (336)
T 2hun_A 78 GVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAA 157 (336)
T ss_dssp EEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHH
T ss_pred EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHH
Confidence 99999997541 12688999999999999872368886 43 44321111 3345555667779999
Q ss_pred HHHHHHH----hCCCeEEEeccccccccccc--CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGG--LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
+|.+++. .+++++++||+.++|+.... +.. .......+..+.++++++..+++++++|+|++++.+++++. .
T Consensus 158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~ 236 (336)
T 2hun_A 158 SDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-S 236 (336)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred HHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-C
Confidence 9998875 58999999999998865321 000 00011234567777888888999999999999999987653 5
Q ss_pred CceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 214 NRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+++|++.+ ++.+|+.|+++.+.+.+|.+.
T Consensus 237 g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~ 265 (336)
T 2hun_A 237 REIYNISA-GEEKTNLEVVKIILRLMGKGE 265 (336)
T ss_dssp TCEEEECC-SCEECHHHHHHHHHHHTTCCS
T ss_pred CCEEEeCC-CCcccHHHHHHHHHHHhCCCc
Confidence 67899875 458999999999999999864
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-31 Score=215.60 Aligned_cols=208 Identities=18% Similarity=0.247 Sum_probs=167.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCHHHHHHHhccCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+.|+|+||||||+||++++++|+++|++|++++|+ +++. ..+...++ +++++|++ +++.+++.++|+||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~-----~~~~---~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN-----EEQG---PELRERGASDIVVANLE--EDFSHAFASIDAVV 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGH---HHHHHTTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC-----hHHH---HHHHhCCCceEEEcccH--HHHHHHHcCCCEEE
Confidence 46899999999999999999999999999999998 4444 23345688 99999998 78888899999999
Q ss_pred EcCCCCccc------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeE
Q 021470 81 CAISGVHIR------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFT 153 (312)
Q Consensus 81 ~~~~~~~~~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~ 153 (312)
|+++..... ..|+.++.+++++|++.+ +++||+ |+++..... ..+ .+...|..+|..+|++++..+++++
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-~~~-~~~~~Y~~sK~~~e~~~~~~gi~~~ 166 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPD-QGP-MNMRHYLVAKRLADDELKRSSLDYT 166 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGG-GSC-GGGHHHHHHHHHHHHHHHHSSSEEE
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCC-CCh-hhhhhHHHHHHHHHHHHHHCCCCEE
Confidence 999976532 268899999999999999 999997 887765442 222 2334566699999999999999999
Q ss_pred EEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHH
Q 021470 154 YVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 154 i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~ 233 (312)
++||+.++++.. .........++...++++++|+|++++.+++++...++.|++.+ + ..+++|+++
T Consensus 167 ~lrpg~v~~~~~------------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~-~-~~~~~e~~~ 232 (236)
T 3e8x_A 167 IVRPGPLSNEES------------TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN-G-DTPIAKVVE 232 (236)
T ss_dssp EEEECSEECSCC------------CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEE-C-SEEHHHHHH
T ss_pred EEeCCcccCCCC------------CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeC-C-CcCHHHHHH
Confidence 999999987632 22333344555568999999999999999999877788899864 4 699999998
Q ss_pred HHH
Q 021470 234 TWE 236 (312)
Q Consensus 234 ~~~ 236 (312)
.++
T Consensus 233 ~i~ 235 (236)
T 3e8x_A 233 QLG 235 (236)
T ss_dssp TC-
T ss_pred Hhc
Confidence 765
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-31 Score=228.17 Aligned_cols=225 Identities=18% Similarity=0.196 Sum_probs=172.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~ 78 (312)
|++|+|||||||||||++++++|+++|++|+++.|+. .+|+.|.+++.++++ ++|+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCE
Confidence 7778999999999999999999999999999987751 379999999999998 9999
Q ss_pred EEEcCCCCcc-----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cc----cCCCCC-chh
Q 021470 79 VICAISGVHI-----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---AN----AMEPGR-VTF 135 (312)
Q Consensus 79 v~~~~~~~~~-----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~----~~~p~~-~~~ 135 (312)
|||+++.... ...|+.++.+++++|++.+ +++||+ |+ ||.....+ +. +..|.. .|.
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 137 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA 137 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH
Confidence 9999997641 1268889999999999998 889887 44 44221111 21 233322 455
Q ss_pred hhHHHHHHHHHH----hCCCeEEEecccccccccccCC------CCCcc-CC----CC-CeeEEeCCCCcceeeeeHHHH
Q 021470 136 DDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLC------QPGSI-LP----SK-DSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 136 ~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~------~~~~~-~~----~~-~~~~~~~~~~~~~~~v~~~D~ 199 (312)
.+|..+|++++. .+++++++||+.++|+...... ..... .. .+ ..+.++++++..++++|++|+
T Consensus 138 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dv 217 (321)
T 1e6u_A 138 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM 217 (321)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHH
Confidence 599999998876 5899999999999986543110 00000 01 12 466778888999999999999
Q ss_pred HHHHHHHhcCCccC--------CceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 200 AMYTMKAINDPRTL--------NRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 200 a~~~~~~l~~~~~~--------~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
|++++.+++++... +++|++++ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 218 a~~~~~~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 274 (321)
T 1e6u_A 218 AAASIHVMELAHEVWLENTQPMLSHINVGT-GVDCTIRELAQTIAKVVGYKGRVVFDA 274 (321)
T ss_dssp HHHHHHHHHSCHHHHHHTSBTTBCCEEESC-SCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred HHHHHHHHhCcccccccccccCCceEEeCC-CCCccHHHHHHHHHHHhCCCCceEeCC
Confidence 99999999887542 57899975 458999999999999999887665444
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=223.76 Aligned_cols=234 Identities=19% Similarity=0.241 Sum_probs=178.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC---C---CeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL---G---HETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+|||||||||||++++++|+++ | ++|++++|+......++. ..+. ..+++++.+|++|++++.+++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL---APVDADPRLRFVHGDIRDAGLLARELRGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG---GGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh---hhcccCCCeEEEEcCCCCHHHHHHHhcCC
Confidence 48999999999999999999997 8 999999997432212211 2221 357899999999999999999999
Q ss_pred CEEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc---ccccCCCCCchhhhHH
Q 021470 77 DVVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKM 139 (312)
Q Consensus 77 d~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~ 139 (312)
|+|||+++.... ...|+.++.+++++|.+.+ +++||+ |+ ||..... .+.+..|...|..+|.
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~ 156 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKA 156 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHH
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHH
Confidence 999999997541 1267899999999999998 889886 43 5432111 1334556566777999
Q ss_pred HHHHHHHH----hCCCeEEEeccccccccccc--CCC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 140 VVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 140 ~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
.+|.+++. .+++++++||+.++|+.... +.. .......+..+.++++++..+++++++|+|++++.+++++.
T Consensus 157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~- 235 (337)
T 1r6d_A 157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR- 235 (337)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC-
Confidence 99998864 58999999999998865321 000 00001234566777888889999999999999999997654
Q ss_pred CCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 213 LNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
.+++|++.++ +.+|+.|+++.+.+.+|.+.
T Consensus 236 ~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 236 AGEIYHIGGG-LELTNRELTGILLDSLGADW 265 (337)
T ss_dssp TTCEEEECCC-CEEEHHHHHHHHHHHHTCCG
T ss_pred CCCEEEeCCC-CCccHHHHHHHHHHHhCCCc
Confidence 5678998754 58999999999999999874
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-32 Score=232.40 Aligned_cols=230 Identities=16% Similarity=0.155 Sum_probs=171.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+|+|||||||||||++++++|+++|++|++++|+..... .+...+ ......+++++.+|+. ++|+|||
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPM-IPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCS-SCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc-cchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 689999999999999999999999999999999855100 000000 1112245666666665 8999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~ 144 (312)
+++.... .. |+.++.+++++|++++ +++||+ |+ |+.....+ +.+..|...|..+|..+|++
T Consensus 76 ~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 153 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMV 153 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 9986541 12 8899999999999999 999997 43 44322211 44556666777799999999
Q ss_pred HHH----hCC-CeEEEecccccccccccC--CC-CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCce
Q 021470 145 IED----AGI-PFTYVSANCFAGYFLGGL--CQ-PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216 (312)
Q Consensus 145 ~~~----~~~-~~~i~r~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~ 216 (312)
++. .++ +++++||+.++|+..... .. .......+..+.++++++..+++++++|+|++++.++.++.. + +
T Consensus 154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g-~ 231 (321)
T 3vps_A 154 AGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S-V 231 (321)
T ss_dssp HHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S-E
T ss_pred HHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C-e
Confidence 876 578 999999999998653320 00 000112456678888899999999999999999999998865 5 8
Q ss_pred EEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 217 MYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 217 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
|++++ ++.+|+.|+++.+. .+|.+.++...+
T Consensus 232 ~~i~~-~~~~s~~e~~~~i~-~~g~~~~~~~~~ 262 (321)
T 3vps_A 232 VNFGS-GQSLSVNDVIRILQ-ATSPAAEVARKQ 262 (321)
T ss_dssp EEESC-SCCEEHHHHHHHHH-TTCTTCEEEEEC
T ss_pred EEecC-CCcccHHHHHHHHH-HhCCCCccccCC
Confidence 88875 45899999999999 999988776554
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-31 Score=224.87 Aligned_cols=234 Identities=16% Similarity=0.070 Sum_probs=175.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhcc--CCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKL--VDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~--~d~v 79 (312)
+|+|||||||||||+++++.|+++|++|++++|+.......+. ..+ ...+++++.+|+.|++++.+++++ +|+|
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL---RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH---HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccch---hhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 5799999999999999999999999999999998654322222 222 235788999999999999999985 6999
Q ss_pred EEcCCCCccc----------cchhHhHHHHHHHHHHhCCC-ceeec-CC---CCCCccc---ccccCCCCCchhhhHHHH
Q 021470 80 ICAISGVHIR----------SHQILLQLKLVDAIKEAGNV-KRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v-~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~~~ 141 (312)
||+++..... ..|+.++.+++++|++.+ + ++||+ |+ |+..... .+.+..|...|..+|..+
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~ 169 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 169 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHH
Confidence 9999975421 267889999999999998 6 78886 43 4432211 134555656677799999
Q ss_pred HHHHHH----hCCCeEEEeccccccccccc-C----CCCCc-cCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 142 RKAIED----AGIPFTYVSANCFAGYFLGG-L----CQPGS-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 142 e~~~~~----~~~~~~i~r~~~~~~~~~~~-~----~~~~~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|.+++. .+++++++||+.++|+.... + ..... ....+. ....+++++..+++++++|+|++++.+++++
T Consensus 170 e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 249 (335)
T 1rpn_A 170 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 249 (335)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC
Confidence 998875 48999999998887753221 1 00000 001222 3345688889999999999999999999887
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
. +++|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 250 ~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~ 279 (335)
T 1rpn_A 250 K--ADDYVVAT-GVTTTVRDMCQIAFEHVGLDY 279 (335)
T ss_dssp S--CCCEEECC-SCEEEHHHHHHHHHHTTTCCG
T ss_pred C--CCEEEEeC-CCCccHHHHHHHHHHHhCCCc
Confidence 5 47888875 458999999999999999864
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=222.41 Aligned_cols=255 Identities=15% Similarity=0.119 Sum_probs=186.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.++|||||||||||+++++.|+++|++|++++|+ .+|+.|++++.++++ ++|+||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~vi 68 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVI 68 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence 4799999999999999999999999999999986 379999999999998 799999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++.... ...|+.++.+++++|++.+ + +||+ |+ |+...... +.+..|...|..+|..+|.
T Consensus 69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 146 (292)
T 1vl0_A 69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN 146 (292)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 99997542 1267888999999999999 7 7776 43 44322111 3444555667779999999
Q ss_pred HHHHhCCCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCC
Q 021470 144 AIEDAGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 144 ~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 222 (312)
+++..+.+++++||+.++|+ -..+..... ....+..+...+ +..+++++++|+|++++.+++++ .+++|+++++
T Consensus 147 ~~~~~~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~ 221 (292)
T 1vl0_A 147 FVKALNPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCK 221 (292)
T ss_dssp HHHHHCSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCB
T ss_pred HHHhhCCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCC
Confidence 99998889999999999976 221111000 001234454554 46789999999999999999876 5678888654
Q ss_pred CCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCccc
Q 021470 223 KNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYT 302 (312)
Q Consensus 223 ~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 302 (312)
+.+|+.|+++.+.+.+|.+.++..+|...+ ..+ .+....+..+. .++.+.+ |++|+
T Consensus 222 -~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~-------------~~~~~~~~~d~--~k~~~~l-G~~p~ 277 (292)
T 1vl0_A 222 -GICSWYDFAVEIFRLTGIDVKVTPCTTEEF-------PRP-------------AKRPKYSVLRN--YMLELTT-GDITR 277 (292)
T ss_dssp -SCEEHHHHHHHHHHHHCCCCEEEEECSTTS-------CCS-------------SCCCSBCCBCC--HHHHHTT-CCCCC
T ss_pred -CCccHHHHHHHHHHHhCCCCceeecccccc-------Ccc-------------cCCCccccccH--HHHHHHc-CCCCC
Confidence 589999999999999999877666654321 000 00001112221 2444444 78888
Q ss_pred CHHHHHHhh
Q 021470 303 TVEEYLRRY 311 (312)
Q Consensus 303 ~~~e~~~~~ 311 (312)
+++|+++++
T Consensus 278 ~~~~~l~~~ 286 (292)
T 1vl0_A 278 EWKESLKEY 286 (292)
T ss_dssp BHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999875
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-30 Score=227.93 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=178.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC---------------hHHHHHhhhhccCCCeEEEccCCCHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD---------------IEKVQMLLSFKEQGAKLVSGSFNDYQ 67 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~~l~~~~~~~v~~D~~d~~ 67 (312)
+++|||||||||||++++++|+++|++|++++|...... .++......+...+++++.+|+.|++
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~ 90 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 90 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence 579999999999999999999999999999998621100 00111111122468999999999999
Q ss_pred HHHHHhcc--CCEEEEcCCCCcc-------------ccchhHhHHHHHHHHHHhCCC-ceeec-CC---CCCCcccc-c-
Q 021470 68 SLVNAVKL--VDVVICAISGVHI-------------RSHQILLQLKLVDAIKEAGNV-KRFLP-SE---FGTDPAKM-A- 125 (312)
Q Consensus 68 ~l~~~~~~--~d~v~~~~~~~~~-------------~~~~~~~~~~l~~aa~~~~~v-~~~v~-S~---~g~~~~~~-~- 125 (312)
++.+++++ +|+|||+|+.... ...|+.++.+++++|++.+ + ++||+ |+ ||...... +
T Consensus 91 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E~ 169 (404)
T 1i24_A 91 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEEG 169 (404)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCcc
Confidence 99999987 9999999986531 1368889999999999998 6 58886 44 44321100 1
Q ss_pred --------------ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccC-------------------
Q 021470 126 --------------NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGL------------------- 168 (312)
Q Consensus 126 --------------~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~------------------- 168 (312)
.+..|...|..+|..+|.+++. .+++++++||+.++|+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~ 249 (404)
T 1i24_A 170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249 (404)
T ss_dssp EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence 2444555666799999998764 489999999999998753210
Q ss_pred C-CCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCC--ceEEecCCCCcCCHHHHHHHHHHH---hCCc
Q 021470 169 C-QPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLN--RTMYLRPPKNILSQREVVETWEKL---IGKT 242 (312)
Q Consensus 169 ~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~--~~~~~~~~~~~~s~~e~~~~~~~~---~g~~ 242 (312)
. ........+..+.++++++..++++|++|+|++++.+++.+...+ ++|++++ +.+|+.|+++.+.+. +|.+
T Consensus 250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--~~~s~~e~~~~i~~~~~~~g~~ 327 (404)
T 1i24_A 250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--EQFSVNELASLVTKAGSKLGLD 327 (404)
T ss_dssp HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--EEEEHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--CCCcHHHHHHHHHHHHHhhCCC
Confidence 0 000001234566678888899999999999999999998775445 6888864 589999999999998 7887
Q ss_pred ceeecCC
Q 021470 243 LQKSSIS 249 (312)
Q Consensus 243 ~~~~~~~ 249 (312)
+++..+|
T Consensus 328 ~~~~~~p 334 (404)
T 1i24_A 328 VKKMTVP 334 (404)
T ss_dssp CCEEEEC
T ss_pred ccccccC
Confidence 6654444
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=221.64 Aligned_cols=227 Identities=15% Similarity=0.127 Sum_probs=174.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~ 76 (312)
|+ |+|||||||||||++++++|+++ |++|++++|+.... . + ..+++++.+|+.|++++.++++ ++
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---~------~-~~~~~~~~~D~~d~~~~~~~~~~~~~ 69 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT---D------V-VNSGPFEVVNALDFNQIEHLVEVHKI 69 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC---H------H-HHSSCEEECCTTCHHHHHHHHHHTTC
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc---c------c-cCCCceEEecCCCHHHHHHHHhhcCC
Confidence 54 78999999999999999999999 89999999975432 1 1 1367899999999999999998 89
Q ss_pred CEEEEcCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCCCCchhhhHH
Q 021470 77 DVVICAISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEPGRVTFDDKM 139 (312)
Q Consensus 77 d~v~~~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~ 139 (312)
|+|||+++.... ...|+.++.+++++|++.+ +++||+ |+ |+.... ..+.+..|...|..+|.
T Consensus 70 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~ 148 (312)
T 2yy7_A 70 TDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQ 148 (312)
T ss_dssp CEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHH
T ss_pred CEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHH
Confidence 999999987532 1268889999999999988 889887 43 443211 11334456666777999
Q ss_pred HHHHHHHH----hCCCeEEEecccccccccccCCC-------CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 140 VVRKAIED----AGIPFTYVSANCFAGYFLGGLCQ-------PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 140 ~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|.+++. .+++++++||+.++|+....... .......++....+++++..++++|++|+|++++.+++
T Consensus 149 ~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 228 (312)
T 2yy7_A 149 AGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMK 228 (312)
T ss_dssp HHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHh
Confidence 99998864 48999999999998854321110 00001234566677788889999999999999999998
Q ss_pred CCcc---CCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 209 DPRT---LNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 209 ~~~~---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
++.. .+++|++++ +.+|+.|+++.+.+.+|.
T Consensus 229 ~~~~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 229 APVEKIKIHSSYNLAA--MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp SCGGGCCCSSCEECCS--EEECHHHHHHHHHTTCTT
T ss_pred CcccccccCceEEeCC--CccCHHHHHHHHHHHCCC
Confidence 8753 247888863 589999999999999983
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-29 Score=216.09 Aligned_cols=243 Identities=19% Similarity=0.254 Sum_probs=171.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|+|||||||||||++++++|+++|++|++++|..... ++..+.+..+...+++++.+|++|++++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcc-hhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 4899999999999999999999999999998754332 222222222224578999999999999999987 5999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccCCC-CCchhhhHHHHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAMEP-GRVTFDDKMVVRK 143 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~~p-~~~~~~~K~~~e~ 143 (312)
+++.... ...|+.++.+++++|++.+ +++||+ |+ ||...... +.+..| ...|..+|..+|.
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~ 158 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence 9986431 1268889999999999998 889887 43 44321111 223323 4556669999999
Q ss_pred HHHH----h-CCCeEEEecccccccccccCCC-------CCcc-------CCCCCeeEEeC------CCCcceeeeeHHH
Q 021470 144 AIED----A-GIPFTYVSANCFAGYFLGGLCQ-------PGSI-------LPSKDSVVLLG------DGNPKAIYVDEDD 198 (312)
Q Consensus 144 ~~~~----~-~~~~~i~r~~~~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~------~~~~~~~~v~~~D 198 (312)
+++. . +++++++||+.++|........ .... ......+.+++ ++++.++++|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 238 (338)
T 1udb_A 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHH
Confidence 8865 2 6899999998877652111000 0000 00223344443 4677889999999
Q ss_pred HHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 199 IAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 199 ~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+|++++.+++.+ ...+++|++++ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 239 va~a~~~~l~~~~~~~~~~~yni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T 1udb_A 239 LADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred HHHHHHHHHhhhhccCCCcEEEecC-CCceeHHHHHHHHHHHhCCCCcceeCC
Confidence 999999988753 22236888864 558999999999999999876654433
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=224.73 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=172.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
++|+|||||||||||++++++|++.|++|++++|+.... .... .......+++++.+|+.+. ++.++|+|||
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih 97 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNV--EHWIGHENFELINHDVVEP-----LYIEVDQIYH 97 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGT--GGGTTCTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccc-hhhh--hhhccCCceEEEeCccCCh-----hhcCCCEEEE
Confidence 368999999999999999999999999999999975432 1111 0112235789999999875 3678999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---c-----ccCCCCCchhhhHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---A-----NAMEPGRVTFDDKM 139 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~-----~~~~p~~~~~~~K~ 139 (312)
+++..... ..|+.++.+++++|++.+ + ++|+ |+ ||...... + .+..|...|..+|.
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~ 175 (343)
T 2b69_A 98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR 175 (343)
T ss_dssp CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHH
Confidence 99875421 368889999999999998 6 6665 43 43321110 1 23344444666999
Q ss_pred HHHHHHHH----hCCCeEEEecccccccccccCCC-----CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 140 VVRKAIED----AGIPFTYVSANCFAGYFLGGLCQ-----PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 140 ~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
.+|.+++. .+++++++||+.++|+....... .......++.+.++++++..+++++++|+|++++.+++.+
T Consensus 176 ~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~ 255 (343)
T 2b69_A 176 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 255 (343)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC
Confidence 99998753 58999999999998875321100 0000123556677888888999999999999999999876
Q ss_pred ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
. +++|+++++ +.+|+.|+++.+.+.+|.+.++..+|
T Consensus 256 ~--~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p 291 (343)
T 2b69_A 256 V--SSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLS 291 (343)
T ss_dssp C--CSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred C--CCeEEecCC-CCCcHHHHHHHHHHHhCCCCCceeCC
Confidence 3 678899754 59999999999999999887665554
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-30 Score=210.93 Aligned_cols=222 Identities=18% Similarity=0.197 Sum_probs=168.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++|+|+||||+|+||++++++|+++ |++|++++|+ +.+.+ .+ ..+++++.+|++|++++.++++++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~-----~~~~~---~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKE---KI-GGEADVFIGDITDADSINPAFQGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC-----HHHHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC-----CCchh---hc-CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence 56789999999999999999999999 8999999998 55542 22 45789999999999999999999999
Q ss_pred EEEcCCCCcc-----------------------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCC--CC
Q 021470 79 VICAISGVHI-----------------------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEP--GR 132 (312)
Q Consensus 79 v~~~~~~~~~-----------------------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p--~~ 132 (312)
|||+++.... ...|+..+.+++++|++.+ +++||+ |+.+.... ..+..+ ..
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~--~~~~~~~~~~ 149 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--DHPLNKLGNG 149 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--TCGGGGGGGC
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCC--CCccccccch
Confidence 9999986421 1367888999999999998 899887 54433211 111111 12
Q ss_pred chhhhHHHHHHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 133 VTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
.|..+|..+|.+++..+++++++||+.++++..... .. . ...... +++ ...++++++|+|++++.++.++..
T Consensus 150 ~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-~~-~-~~~~~~--~~~---~~~~~~~~~Dva~~~~~~~~~~~~ 221 (253)
T 1xq6_A 150 NILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-EL-L-VGKDDE--LLQ---TDTKTVPRADVAEVCIQALLFEEA 221 (253)
T ss_dssp CHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-CE-E-EESTTG--GGG---SSCCEEEHHHHHHHHHHHTTCGGG
T ss_pred hHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-hh-h-ccCCcC--CcC---CCCcEEcHHHHHHHHHHHHcCccc
Confidence 344589999999999999999999999988653211 00 0 000011 111 134689999999999999998766
Q ss_pred CCceEEecCCC--CcCCHHHHHHHHHHHhCCc
Q 021470 213 LNRTMYLRPPK--NILSQREVVETWEKLIGKT 242 (312)
Q Consensus 213 ~~~~~~~~~~~--~~~s~~e~~~~~~~~~g~~ 242 (312)
.+++|++.++. +.+|+.|+++.+++.+|++
T Consensus 222 ~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp TTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred cCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 67889997653 4699999999999998864
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-30 Score=207.53 Aligned_cols=203 Identities=15% Similarity=0.174 Sum_probs=160.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC-HHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND-YQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~l~~~~~~~d~v~~~ 82 (312)
|+|+||||||+||+++++.|+++|++|++++|+.. +. .. ..+++++++|+.| ++++.++++++|+|||+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~---~~--~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-----QV---PQ--YNNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-----GS---CC--CTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-----ch---hh--cCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 48999999999999999999999999999999833 22 11 1689999999999 99999999999999999
Q ss_pred CCCCcc--ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc--cccCCCCCchhhhHHHHHHHH-HHhCCCeEEEe
Q 021470 83 ISGVHI--RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM--ANAMEPGRVTFDDKMVVRKAI-EDAGIPFTYVS 156 (312)
Q Consensus 83 ~~~~~~--~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~--~~~~~p~~~~~~~K~~~e~~~-~~~~~~~~i~r 156 (312)
++.... ...|+.++.+++++|++.+ +++||+ |+.+...... +.+..|...|..+|..+|+++ +..+++++++|
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilr 149 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ 149 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEe
Confidence 997653 3578999999999999998 999987 5544332211 111122345666999999999 77899999999
Q ss_pred cccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHH
Q 021470 157 ANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVET 234 (312)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~ 234 (312)
|+.++++... +.+. . ++..+++++++|+|++++.++.++...+++|++. ++ ..++.|+++.
T Consensus 150 p~~v~g~~~~------------~~~~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~-~g-~~~~~e~~~~ 210 (219)
T 3dqp_A 150 PGALTEEEAT------------GLID-I--NDEVSASNTIGDVADTIKELVMTDHSIGKVISMH-NG-KTAIKEALES 210 (219)
T ss_dssp ECSEECSCCC------------SEEE-E--SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEE-EC-SEEHHHHHHT
T ss_pred CceEecCCCC------------Cccc-c--CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeC-CC-CccHHHHHHH
Confidence 9999876321 1111 2 2567899999999999999999987778899986 34 6899988763
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=218.89 Aligned_cols=236 Identities=13% Similarity=0.094 Sum_probs=171.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc---
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--- 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--- 75 (312)
|+|||||||||||++++++|+++| ++|++++|+..... +...+++++.+|+.|++++.+++++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 72 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSPLTD 72 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhcCCC
Confidence 689999999999999999999999 99999999855421 2245789999999999999999998
Q ss_pred CCEEEEcCCCCcc-----ccchhHhHHHHHHHHHHh--CCCceee-------c-CC---CCCCc---cc--ccccCCC-C
Q 021470 76 VDVVICAISGVHI-----RSHQILLQLKLVDAIKEA--GNVKRFL-------P-SE---FGTDP---AK--MANAMEP-G 131 (312)
Q Consensus 76 ~d~v~~~~~~~~~-----~~~~~~~~~~l~~aa~~~--~~v~~~v-------~-S~---~g~~~---~~--~~~~~~p-~ 131 (312)
+|+|||+++.... ...|+.++.+++++|++. + ++++| + |+ ||... .. .+.+..| .
T Consensus 73 ~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~ 151 (364)
T 2v6g_A 73 VTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYM 151 (364)
T ss_dssp CCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSC
T ss_pred CCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccccCCccc
Confidence 9999999987542 237899999999999998 6 88886 3 44 44321 11 0222333 3
Q ss_pred CchhhhHHHHHHHHHHhC-CCeEEEecccccccccccCCCC-----CccCC---CCCeeEEeCCCC---cceeeeeHHHH
Q 021470 132 RVTFDDKMVVRKAIEDAG-IPFTYVSANCFAGYFLGGLCQP-----GSILP---SKDSVVLLGDGN---PKAIYVDEDDI 199 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~~~-~~~~i~r~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~---~~~~~v~~~D~ 199 (312)
..|+..+..++++.+..+ ++++++||+.++|+........ ..... .+..+.++++++ ...++++++|+
T Consensus 152 ~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dv 231 (364)
T 2v6g_A 152 NFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI 231 (364)
T ss_dssp CHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHH
T ss_pred hhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHH
Confidence 445444444444433355 9999999999998654322110 00001 244445566553 34788889999
Q ss_pred HHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee--cCCH
Q 021470 200 AMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS--SISK 250 (312)
Q Consensus 200 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~--~~~~ 250 (312)
|++++.+++++...+++|++++ ++.+|+.|+++.+++.+|.+.... .+|.
T Consensus 232 a~a~~~~~~~~~~~g~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~ 283 (364)
T 2v6g_A 232 AEHHIWAAVDPYAKNEAFNVSN-GDVFKWKHFWKVLAEQFGVECGEYEEGVDL 283 (364)
T ss_dssp HHHHHHHHHCGGGTTEEEEECC-SCCBCHHHHHHHHHHHHTCCBCCCCTTCCC
T ss_pred HHHHHHHHhCCCCCCceEEecC-CCcCCHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 9999999988765677899975 458999999999999999876543 4443
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=216.49 Aligned_cols=231 Identities=16% Similarity=0.145 Sum_probs=171.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhcc--CCE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKL--VDV 78 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~--~d~ 78 (312)
.||+||||||||+||+++++.|+++|++|++++|+.... . +.+.. .+++++.+|+.|++++.+++++ +|+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR-R------EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-G------GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc-h------hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcE
Confidence 368999999999999999999999999999999975432 1 11211 4789999999999999999998 999
Q ss_pred EEEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CC---CC----CCcccc-cccCCCC-CchhhhHHHH
Q 021470 79 VICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FG----TDPAKM-ANAMEPG-RVTFDDKMVV 141 (312)
Q Consensus 79 v~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g----~~~~~~-~~~~~p~-~~~~~~K~~~ 141 (312)
|||+++.... ...|+.++.+++++|.+.+ +++||+ |+ |+ ...... ++. .|. ..|..+|..+
T Consensus 93 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~-~p~~~~Y~~sK~~~ 170 (333)
T 2q1w_A 93 VVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR-NPANSSYAISKSAN 170 (333)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC-CCTTCHHHHHHHHH
T ss_pred EEECceecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC-CCCCCchHHHHHHH
Confidence 9999997653 2357889999999999998 889886 43 43 211100 111 444 5666699999
Q ss_pred HHHHHH-hCCCeEEEecccccccccc-cCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021470 142 RKAIED-AGIPFTYVSANCFAGYFLG-GLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 142 e~~~~~-~~~~~~i~r~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
|.+++. .. +++++||+.++|+... .+..... ....+. .+++ ++..+++++++|+|++++.+++++. +++|+
T Consensus 171 E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g~~~~ 244 (333)
T 2q1w_A 171 EDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--HGAYH 244 (333)
T ss_dssp HHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--CEEEE
T ss_pred HHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--CCEEE
Confidence 999998 76 9999999988775411 0000000 001222 2344 5667899999999999999998875 77888
Q ss_pred ecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 219 LRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+.+ ++.+|+.|+++.+.+.+|.+ ++..+|
T Consensus 245 v~~-~~~~s~~e~~~~i~~~~g~~-~~~~~~ 273 (333)
T 2q1w_A 245 FSS-GTDVAIKELYDAVVEAMALP-SYPEPE 273 (333)
T ss_dssp CSC-SCCEEHHHHHHHHHHHTTCS-SCCCCE
T ss_pred eCC-CCCccHHHHHHHHHHHhCCC-CceeCC
Confidence 875 45999999999999999987 444333
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=236.66 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=175.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
+|+||||||+|+||++++++|+++|++|++++|+.... ......+..+...+++++.+|+.|++++.++++ ++|+||
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcch-HHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 57999999999999999999999999999999975443 222222233345689999999999999999998 899999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc-------cccccCCCCCchhhhHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA-------KMANAMEPGRVTFDDKM 139 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~-------~~~~~~~p~~~~~~~K~ 139 (312)
|+|+.... ...|+.++.+++++|++.+ +++||+ |+ ||.... ..+.+..|...|..+|.
T Consensus 90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 168 (699)
T 1z45_A 90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 168 (699)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence 99997542 1267889999999999998 899886 43 332110 00234445566777999
Q ss_pred HHHHHHHH------hCCCeEEEecccccccccccCCC-------CC----c-cC-C-CCCeeEEeC------CCCcceee
Q 021470 140 VVRKAIED------AGIPFTYVSANCFAGYFLGGLCQ-------PG----S-IL-P-SKDSVVLLG------DGNPKAIY 193 (312)
Q Consensus 140 ~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~-------~~----~-~~-~-~~~~~~~~~------~~~~~~~~ 193 (312)
.+|++++. .+++++++||+.++|........ .. + .. . .+.++.+++ +++..+++
T Consensus 169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 248 (699)
T 1z45_A 169 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 248 (699)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEee
Confidence 99998875 58899999999888753211000 00 0 00 1 123444444 57788999
Q ss_pred eeHHHHHHHHHHHhcCC------ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 194 VDEDDIAMYTMKAINDP------RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~------~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
||++|+|++++.++..+ ...+++|++++ ++.+|+.|+++.+++.+|.++++.
T Consensus 249 i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~-~~~~s~~el~~~i~~~~g~~~~~~ 306 (699)
T 1z45_A 249 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS-GKGSTVFEVYHAFCKASGIDLPYK 306 (699)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC-SCCEEHHHHHHHHHHHHTCCCCC-
T ss_pred EEHHHHHHHHHHHHhhhhccccccCCceEEEECC-CCCCcHHHHHHHHHHHhCCCCCce
Confidence 99999999999998642 22356888875 458999999999999999886654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=218.41 Aligned_cols=235 Identities=15% Similarity=0.195 Sum_probs=176.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
|+||||||+||||+++++.|++. |++|++++|+......++. ..+ ...+++++.+|+.|++++.++++ ++|+|
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL---SDISESNRYNFEHADICDSAEITRIFEQYQPDAV 77 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG---TTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh---hhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 47999999999999999999998 7999999997532111111 222 13478999999999999999998 89999
Q ss_pred EEcCCCCcc----------ccchhHhHHHHHHHHHHh--CCCc-------eeec-CC---CCCCcc-------------c
Q 021470 80 ICAISGVHI----------RSHQILLQLKLVDAIKEA--GNVK-------RFLP-SE---FGTDPA-------------K 123 (312)
Q Consensus 80 ~~~~~~~~~----------~~~~~~~~~~l~~aa~~~--~~v~-------~~v~-S~---~g~~~~-------------~ 123 (312)
||+++.... ...|+.++.+++++|.+. + ++ +||+ |+ ||.... .
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~ 156 (361)
T 1kew_A 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence 999997541 126889999999999998 8 87 8886 43 553210 1
Q ss_pred ccccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccC--CC-CCccCCCCCeeEEeCCCCcceeeeeH
Q 021470 124 MANAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGL--CQ-PGSILPSKDSVVLLGDGNPKAIYVDE 196 (312)
Q Consensus 124 ~~~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~v~~ 196 (312)
.+.+..|...|..+|..+|.+++. .+++++++||+.++|+..... .. .......+..+.++++++..++++++
T Consensus 157 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 236 (361)
T 1kew_A 157 ETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEH
Confidence 133445556677799999998875 489999999999988754210 00 00001234566777888889999999
Q ss_pred HHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 197 DDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
+|+|++++.+++.+. .+++|++.+ ++.+|+.|+++.+.+.+|.+.+
T Consensus 237 ~Dva~a~~~~~~~~~-~g~~~~v~~-~~~~s~~e~~~~i~~~~g~~~~ 282 (361)
T 1kew_A 237 EDHARALHMVVTEGK-AGETYNIGG-HNEKKNLDVVFTICDLLDEIVP 282 (361)
T ss_dssp HHHHHHHHHHHHHCC-TTCEEEECC-CCEEEHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCC-CCCEEEecC-CCeeeHHHHHHHHHHHhCCcCc
Confidence 999999999997653 567889875 4589999999999999997643
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-30 Score=228.44 Aligned_cols=251 Identities=15% Similarity=0.141 Sum_probs=181.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC-hHHH-HHh--------hhhccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-IEKV-QML--------LSFKEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~-~~~--------~~l~~~~~~~v~~D~~d~~~l~~~ 72 (312)
+|+||||||||+||++++++|++.|++|++++|+..... ..+. ..+ ......+++++.+|+.|++.+. .
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 147 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 147 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence 679999999999999999999999999999999854110 0000 000 1112468999999999988888 7
Q ss_pred hccCCEEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CCCCC--C-----cccc---ccc---CCCC
Q 021470 73 VKLVDVVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGT--D-----PAKM---ANA---MEPG 131 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~--~-----~~~~---~~~---~~p~ 131 (312)
+.++|+|||+++..... ..|+.++.+++++|.+ + +++||+ |+.+. . .... +++ ..|.
T Consensus 148 ~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~ 225 (427)
T 4f6c_A 148 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 225 (427)
T ss_dssp SSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCC
T ss_pred cCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccCCCCC
Confidence 77999999999976421 3789999999999999 6 788886 54333 0 0000 111 2355
Q ss_pred CchhhhHHHHHHHHHH---hCCCeEEEecccccccccccCCCCC---------cc-CCCCCeeEEeCCCCcceeeeeHHH
Q 021470 132 RVTFDDKMVVRKAIED---AGIPFTYVSANCFAGYFLGGLCQPG---------SI-LPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
..|..+|+.+|.+++. .+++++++||+.++|+......... +. ....+.++ .+.++..+++++++|
T Consensus 226 ~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D 304 (427)
T 4f6c_A 226 SPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVDT 304 (427)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEE-HHHHTCEECCEEHHH
T ss_pred CchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCC-CccccceEEEeeHHH
Confidence 6677799999999886 7999999999999987544321100 00 01122332 234578899999999
Q ss_pred HHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccc
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAG 264 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 264 (312)
+|++++.++..+. .+++|+++++ +.+|+.|+++.+++ +| +..++.++|...+...++++
T Consensus 305 vA~ai~~~~~~~~-~g~~~~l~~~-~~~s~~el~~~i~~-~g----~~~~~~~~~~~~l~~~~~~~ 363 (427)
T 4f6c_A 305 TARQIVALAQVNT-PQIIYHVLSP-NKMPVKSLLECVKR-KE----IELVSDESFNEILQKQDMYE 363 (427)
T ss_dssp HHHHHHHHTTSCC-CCSEEEESCS-CCEEHHHHHHHHHS-SC----CEEECHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCC-CCCEEEecCC-CCCcHHHHHHHHHH-cC----CcccCHHHHHHHHHhcCchh
Confidence 9999999999887 7889999865 49999999999998 66 66788899999888766543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=215.94 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=173.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhcc--CC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKL--VD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~--~d 77 (312)
|+.|+||||||||+||++++++|+++|++|++++|+......... ..+ ...+++++.+|+.|++++.+++++ +|
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRL---KELGIENDVKIIHMDLLEFSNIIRTIEKVQPD 77 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHH---HHTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccH---hhccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence 667899999999999999999999999999999998554311111 222 124688999999999999999985 69
Q ss_pred EEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCC-ceeec-CC---CCCCcccc---cccCCCCCchhhhHH
Q 021470 78 VVICAISGVHI----------RSHQILLQLKLVDAIKEAGNV-KRFLP-SE---FGTDPAKM---ANAMEPGRVTFDDKM 139 (312)
Q Consensus 78 ~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v-~~~v~-S~---~g~~~~~~---~~~~~p~~~~~~~K~ 139 (312)
+|||+++.... ...|+.++.+++++|.+.+ + ++||+ |+ ||.....+ +.+..|...|..+|.
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 156 (345)
T 2z1m_A 78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKL 156 (345)
T ss_dssp EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHH
Confidence 99999997532 1268889999999999988 7 78886 43 44322111 344455566777999
Q ss_pred HHHHHHHH----hCCCeEEEecccccccccc-cCCCCC----c-cCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 140 VVRKAIED----AGIPFTYVSANCFAGYFLG-GLCQPG----S-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 140 ~~e~~~~~----~~~~~~i~r~~~~~~~~~~-~~~~~~----~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|.+++. .+++++++|+...+++... ...... . ....+. ....+++++..+++++++|+|++++.+++
T Consensus 157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~ 236 (345)
T 2z1m_A 157 FGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ 236 (345)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence 99998865 4888888886665554321 110000 0 001122 23356777888899999999999999998
Q ss_pred CCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 209 DPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
++. +++|++++ ++.+|+.|+++.+.+.+|.++++.
T Consensus 237 ~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~ 271 (345)
T 2z1m_A 237 QPE--PDDYVIAT-GETHTVREFVEKAAKIAGFDIEWV 271 (345)
T ss_dssp SSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred CCC--CceEEEeC-CCCccHHHHHHHHHHHhCCCcccc
Confidence 765 46888874 559999999999999999986644
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=217.79 Aligned_cols=214 Identities=15% Similarity=0.117 Sum_probs=164.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v~~ 81 (312)
|+|+|||||||||++++++|+ +|++|++++|+. +.+.+|+.|++++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS-------------------KEFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc-------------------ccccccCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999 899999999972 1347899999999999986 999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc---ccccCCCCCchhhhHHHHHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK---MANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~---~~~~~~p~~~~~~~K~~~e~~ 144 (312)
+++.... ...|+.++.+++++|++.+ + +||+ |+ |+..... .+.+..|...|..+|..+|++
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 138 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKA 138 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 9987542 1267889999999999988 7 6775 43 4432211 134555656677799999999
Q ss_pred HHHhCCCeEEEecccccccccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--c-CCceEEec
Q 021470 145 IEDAGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--T-LNRTMYLR 220 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~-~~~~~~~~ 220 (312)
++....+++++||+.++|+....+..... ....+..+...+ +..+++++++|+|++++.+++++. . .+++|+++
T Consensus 139 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~ 216 (299)
T 1n2s_A 139 LQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV 216 (299)
T ss_dssp HHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECC
T ss_pred HHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEe
Confidence 99988899999999998864321111000 012244555554 478899999999999999998762 2 36788887
Q ss_pred CCCCcCCHHHHHHHHHHHhCCc
Q 021470 221 PPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 221 ~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+ ++.+|+.|+++.+.+.+|.+
T Consensus 217 ~-~~~~s~~e~~~~i~~~~g~~ 237 (299)
T 1n2s_A 217 A-GGTTTWHDYAALVFDEARKA 237 (299)
T ss_dssp C-BSCEEHHHHHHHHHHHHHHH
T ss_pred C-CCCCCHHHHHHHHHHHhCCC
Confidence 5 45999999999999999976
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=214.09 Aligned_cols=232 Identities=19% Similarity=0.228 Sum_probs=172.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.|+||||||||+||++++++|+++|++|++++|+.... .+ ....+ .+++++.+|+.|++++.++++ ++|+||
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-RE---VLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC-GG---GSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc-hh---hhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 57999999999999999999999999999999974332 10 00111 478899999999999999999 999999
Q ss_pred EcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc--c--cccCCCCCchhhhHHHHHHHH
Q 021470 81 CAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK--M--ANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 81 ~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~--~--~~~~~p~~~~~~~K~~~e~~~ 145 (312)
|+++.... ...|+.++.+++++|.+.+ +++||+ |+ |+..... + ++. .|...|..+|..+|.++
T Consensus 94 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-~~~~~Y~~sK~~~e~~~ 171 (330)
T 2pzm_A 94 HSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-APFTSYGISKTAGEAFL 171 (330)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-CCCSHHHHHHHHHHHHH
T ss_pred ECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-CCCChHHHHHHHHHHHH
Confidence 99997643 1367889999999999998 889886 43 3322110 0 111 24556667999999999
Q ss_pred HHhCCCeEEEecccccccccc-cCCCCCcc-CCCCCeeEEeCCCCcceeeeeHHHHHH-HHHHHhcCCccCCceEEecCC
Q 021470 146 EDAGIPFTYVSANCFAGYFLG-GLCQPGSI-LPSKDSVVLLGDGNPKAIYVDEDDIAM-YTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~D~a~-~~~~~l~~~~~~~~~~~~~~~ 222 (312)
+..+++++++||+.++++... .+...... ...+. ..++++. .+++++++|+|+ +++.+++++. +++|++.+
T Consensus 172 ~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~~~~v~~- 245 (330)
T 2pzm_A 172 MMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TGVFNVST- 245 (330)
T ss_dssp HTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CEEEEESC-
T ss_pred HHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CCEEEeCC-
Confidence 988999999998887775431 11000000 01122 3345556 789999999999 9999998765 78888875
Q ss_pred CCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 223 KNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 223 ~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++.+|+.|+++.+.+.+|.+ ++..+|
T Consensus 246 ~~~~s~~e~~~~i~~~~g~~-~~~~~~ 271 (330)
T 2pzm_A 246 GEGHSIKEVFDVVLDYVGAT-LAEPVP 271 (330)
T ss_dssp SCCEEHHHHHHHHHHHHTCC-CSSCCC
T ss_pred CCCCCHHHHHHHHHHHhCCC-CceeCC
Confidence 45899999999999999987 444433
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=216.18 Aligned_cols=236 Identities=19% Similarity=0.200 Sum_probs=173.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC-HHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND-YQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~l~~~~~~~d~v~~ 81 (312)
|+|||||||||||++++++|+++ |++|++++|+... .. ..+...+++++++|+.| .+.+.++++++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~-----~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih 73 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA-----IS--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG-----GG--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcch-----HH--HhhcCCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence 58999999999999999999998 8999999998432 11 11234578999999998 4678888999999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cccC-------CCCCchhhh
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANAM-------EPGRVTFDD 137 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~~-------~p~~~~~~~ 137 (312)
+++..... ..|+.++.+++++|++.+ ++||+ |+ ||...... +.+. .|...|..+
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~s 151 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 151 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHH
Confidence 99865421 257888999999999887 67776 54 33322110 1111 122245569
Q ss_pred HHHHHHHHHH----hCCCeEEEecccccccccccCCC-----------CCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 138 KMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQ-----------PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 138 K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
|..+|++++. .+++++++||+.++|+....... .......+..+.++++++..++++|++|+|++
T Consensus 152 K~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 231 (345)
T 2bll_A 152 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 231 (345)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHH
Confidence 9999998853 58999999999998875432110 00001234566677888889999999999999
Q ss_pred HHHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecC
Q 021470 203 TMKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSI 248 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 248 (312)
++.+++++. ..+++|++.+++..+|+.|+++.+.+.+|.+.....+
T Consensus 232 ~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~ 279 (345)
T 2bll_A 232 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF 279 (345)
T ss_dssp HHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGS
T ss_pred HHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccC
Confidence 999998764 4567888874423799999999999999987544333
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-29 Score=200.30 Aligned_cols=207 Identities=16% Similarity=0.206 Sum_probs=141.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+||||||+||++++++|+++|++|++++|+ +++.. .+. .+++++++|+.|+++ +++.++|+|||++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~~---~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN-----AGKIT---QTH-KDINILQKDIFDLTL--SDLSDQNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----SHHHH---HHC-SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC-----chhhh---hcc-CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence 589999999999999999999999999999998 55542 232 789999999999887 7889999999999
Q ss_pred CCCcc-ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCccc-------ccccCCCCCchhhhHHHHHHH--HH--HhCC
Q 021470 84 SGVHI-RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAK-------MANAMEPGRVTFDDKMVVRKA--IE--DAGI 150 (312)
Q Consensus 84 ~~~~~-~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~-------~~~~~~p~~~~~~~K~~~e~~--~~--~~~~ 150 (312)
+.... ...|+..+++++++|++++ ++++|+ |+.+..... .+.+..|...|..+|...|.+ +. ..++
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi 148 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEF 148 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTS
T ss_pred cCCccccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCc
Confidence 98542 3468899999999999998 788876 554332111 023334444455588888776 66 5789
Q ss_pred CeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHH
Q 021470 151 PFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQRE 230 (312)
Q Consensus 151 ~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e 230 (312)
+++++||+.++++. ...... ......+...+++ .++++++|+|++++.+++++...++.|+++++. ..+.+|
T Consensus 149 ~~~ivrp~~v~g~~-~~~~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~-~~~~~~ 220 (221)
T 3ew7_A 149 SWTYISPSAMFEPG-ERTGDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKL-EHHHHH 220 (221)
T ss_dssp CEEEEECSSCCCCC----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC---------
T ss_pred cEEEEeCcceecCC-CccCce---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCC-cccccc
Confidence 99999999999861 111111 1122233333333 368999999999999999998889999998765 555443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=195.23 Aligned_cols=199 Identities=18% Similarity=0.197 Sum_probs=152.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+.|+|+||||||+||++++++|+++|++|++++|+.. +. ..+...+++++++|+.|++++.++++++|+||
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~-----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS-----RL---PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG-----GS---CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh-----hc---ccccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 66689999999999999999999999999999999832 21 22224689999999999999999999999999
Q ss_pred EcCCCCcc---ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEe
Q 021470 81 CAISGVHI---RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156 (312)
Q Consensus 81 ~~~~~~~~---~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r 156 (312)
|+++.... ...|+..+.+++++|++.+ ++++|+ |+.+..... .....+...|..+|..+|+++++.+++++++|
T Consensus 73 ~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~-~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lr 150 (206)
T 1hdo_A 73 VLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP-TKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM 150 (206)
T ss_dssp ECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT-TCSCGGGHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred ECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCc-ccccccchhHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99987542 3468889999999999999 899886 654432221 11111234566699999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeHHHHHHHHHHHhcCCccCCceEEecCC
Q 021470 157 ANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDEDDIAMYTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 222 (312)
|+.+++...... . ..... +.+ .++++++|+|++++.+++++...++.|++.++
T Consensus 151 p~~~~~~~~~~~--~---------~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g 204 (206)
T 1hdo_A 151 PPHIGDQPLTGA--Y---------TVTLD--GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204 (206)
T ss_dssp CSEEECCCCCSC--C---------EEESS--SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred CCcccCCCCCcc--e---------Eeccc--CCCCCCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence 999854322110 0 00011 111 48999999999999999998767889998753
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.5e-29 Score=214.44 Aligned_cols=233 Identities=15% Similarity=0.160 Sum_probs=173.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-----LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-----~~ 76 (312)
.|+|||||||||||++++++|+++| ++|++++|+.... +. ..+ .++. +.+|+.|.+.+.++++ ++
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~ 116 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF---VNL--VDLN-IADYMDKEDFLIQIMAGEEFGDV 116 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGG---GG---GGT--TTSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcc---hh---hcc--cCce-EeeecCcHHHHHHHHhhcccCCC
Confidence 3789999999999999999999999 9999999974321 01 112 2334 7899999999999987 59
Q ss_pred CEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc---cccccCCCCCchhhhHHHH
Q 021470 77 DVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA---KMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 77 d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~---~~~~~~~p~~~~~~~K~~~ 141 (312)
|+|||+++..... ..|+.++.+++++|++.+ + +||+ |+ |+.... ..+.+..|...|..+|..+
T Consensus 117 d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~ 194 (357)
T 2x6t_A 117 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLF 194 (357)
T ss_dssp CEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHH
T ss_pred CEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHH
Confidence 9999999975421 268889999999999999 7 8876 43 443221 1134455656677799999
Q ss_pred HHHHHH----hCCCeEEEeccccccccccc------CCCCC-ccCCCCCeeEEeCCCCc-ceeeeeHHHHHHHHHHHhcC
Q 021470 142 RKAIED----AGIPFTYVSANCFAGYFLGG------LCQPG-SILPSKDSVVLLGDGNP-KAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 142 e~~~~~----~~~~~~i~r~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~-~~~~v~~~D~a~~~~~~l~~ 209 (312)
|.+++. .+++++++||+.++|+.... +.... .....+..+.++++++. .+++++++|+|++++.++++
T Consensus 195 E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 195 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence 999876 37899999999998764321 00000 00123455666777778 89999999999999999987
Q ss_pred CccCCceEEecCCCCcCCHHHHHHHHHHHhCCc-ceeecCC
Q 021470 210 PRTLNRTMYLRPPKNILSQREVVETWEKLIGKT-LQKSSIS 249 (312)
Q Consensus 210 ~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~ 249 (312)
+. +++|++.+ ++.+|+.|+++.+.+.+|.+ +++.+.+
T Consensus 275 ~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 312 (357)
T 2x6t_A 275 GV--SGIFNLGT-GRAESFQAVADATLAYHKKGQIEYIPFP 312 (357)
T ss_dssp CC--CEEEEESC-SCCEEHHHHHHHHHHHHTCCCCEEECCC
T ss_pred CC--CCeEEecC-CCcccHHHHHHHHHHHcCCCCceecCCC
Confidence 75 77888875 45899999999999999987 4444444
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=209.49 Aligned_cols=221 Identities=11% Similarity=0.056 Sum_probs=150.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v~ 80 (312)
+|+||||||||+||++++++|+++|++|++++|+.. + .+ ++.+|+.|++++.+++++ +|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~---------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA-----R---------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC-----C---------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 379999999999999999999999999999998721 1 12 778999999999999885 99999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc--ccccCCCCCchhhhHHHHHHH
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK--MANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~--~~~~~~p~~~~~~~K~~~e~~ 144 (312)
|+++.... ...|+.++.+++++|.+.+ + ++|+ |+ |+..... .+.+..|...|..+|..+|.+
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 143 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKA 143 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99986532 1268899999999999998 6 7765 43 3331111 133445556666799999999
Q ss_pred HHHhCCCeEEEecccccccccc---cCCCCCcc-CC-CCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC---ccCCce
Q 021470 145 IEDAGIPFTYVSANCFAGYFLG---GLCQPGSI-LP-SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP---RTLNRT 216 (312)
Q Consensus 145 ~~~~~~~~~i~r~~~~~~~~~~---~~~~~~~~-~~-~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~---~~~~~~ 216 (312)
++..+.+++++||+.++|+... .+...... .. .+..+.+. ++..+++++++|+|++++.++.++ ...+++
T Consensus 144 ~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ 221 (315)
T 2ydy_A 144 VLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGT 221 (315)
T ss_dssp HHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred HHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCe
Confidence 9999999999999999876443 22111110 11 33344443 467789999999999999998764 235778
Q ss_pred EEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 217 MYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 217 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
|+++++ +.+|+.|+++.+.+.+|.+.+
T Consensus 222 ~~i~~~-~~~s~~e~~~~i~~~~g~~~~ 248 (315)
T 2ydy_A 222 FHWSGN-EQMTKYEMACAIADAFNLPSS 248 (315)
T ss_dssp EECCCS-CCBCHHHHHHHHHHHTTCCCT
T ss_pred EEEcCC-CcccHHHHHHHHHHHhCCChh
Confidence 888754 599999999999999998754
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=228.66 Aligned_cols=250 Identities=14% Similarity=0.146 Sum_probs=183.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH---h--------hhhccCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM---L--------LSFKEQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~--------~~l~~~~~~~v~~D~~d~~~l~~ 71 (312)
+|+|||||||||||++|+++|++.|++|++++|+.... ...... + ......+++++.+|+.|++.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEE-IAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHH-HHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChH-HHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 57999999999999999999999999999999985421 000000 0 1122468999999999988777
Q ss_pred HhccCCEEEEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CCCCC--Cc-----ccc---ccc---CCC
Q 021470 72 AVKLVDVVICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT--DP-----AKM---ANA---MEP 130 (312)
Q Consensus 72 ~~~~~d~v~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~--~~-----~~~---~~~---~~p 130 (312)
++.++|+|||+++.... ...|+.++.+++++|++ + +++||+ |+.+. .. ... +++ ..|
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~ 305 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 305 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence 77799999999997542 13689999999999998 5 688886 54333 10 000 111 224
Q ss_pred CCchhhhHHHHHHHHHH---hCCCeEEEecccccccccccCCCCC---------c-cCCCCCeeEEeCCCCcceeeeeHH
Q 021470 131 GRVTFDDKMVVRKAIED---AGIPFTYVSANCFAGYFLGGLCQPG---------S-ILPSKDSVVLLGDGNPKAIYVDED 197 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~v~~~ 197 (312)
...|..+|+.+|++++. .|++++++||+.++|.......... + .....+.++ .+.++..+++++++
T Consensus 306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~ 384 (508)
T 4f6l_B 306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVD 384 (508)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHH
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHH
Confidence 56677799999999886 6899999999999987543321100 0 012223333 34467889999999
Q ss_pred HHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccc
Q 021470 198 DIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAG 264 (312)
Q Consensus 198 D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 264 (312)
|+|++++.++.++. .+++|+++++. .+|+.|+++.+++.. +..++.++|...+...++++
T Consensus 385 DvA~ai~~~~~~~~-~~~~~nl~~~~-~~s~~el~~~i~~~~-----~~~~~~~~w~~~l~~~~~~~ 444 (508)
T 4f6l_B 385 TTARQIVALAQVNT-PQIIYHVLSPN-KMPVKSLLECVKRKE-----IELVSDESFNEILQKQDMYE 444 (508)
T ss_dssp HHHHHHHHHTTBCC-SCSEEEESCSC-EEEHHHHHHHHHSSC-----CEEECHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHhCCC-CCCEEEeCCCC-CCCHHHHHHHHHHcC-----CcccCHHHHHHHHHhcCCcc
Confidence 99999999998876 78899998654 999999999999754 66788899998888766544
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=211.22 Aligned_cols=224 Identities=16% Similarity=0.164 Sum_probs=155.4
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc-----CCE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL-----VDV 78 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~-----~d~ 78 (312)
+||||||||+||++++++|+++| ++|++++|+.... +. ..+. +++ +.+|+.|.+.+.+++++ +|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~---~~---~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KF---VNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG---GG---HHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCc---hh---hhcC--cce-eccccccHHHHHHHHhccccCCCcE
Confidence 58999999999999999999999 9999999975422 11 1111 233 78999999999999875 999
Q ss_pred EEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc---cccccCCCCCchhhhHHHHHH
Q 021470 79 VICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA---KMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 79 v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~---~~~~~~~p~~~~~~~K~~~e~ 143 (312)
|||+++..... ..|+.++.+++++|++.+ + +||+ |+ ||.... ..+.+..|...|..+|..+|.
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~ 149 (310)
T 1eq2_A 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDE 149 (310)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHH
T ss_pred EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 99999976421 268889999999999999 7 8876 43 443221 113455566667779999999
Q ss_pred HHHH----hCCCeEEEeccccccccccc------CCCCC-ccCCCCCeeEEeCCCCc-ceeeeeHHHHHHHHHHHhcCCc
Q 021470 144 AIED----AGIPFTYVSANCFAGYFLGG------LCQPG-SILPSKDSVVLLGDGNP-KAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 144 ~~~~----~~~~~~i~r~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~-~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+++. .+++++++||+.++|+.... +.... .....+..+.++++++. .++++|++|+|++++.+++++.
T Consensus 150 ~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~ 229 (310)
T 1eq2_A 150 YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229 (310)
T ss_dssp HHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence 9876 37899999999998865321 00000 00123445556777778 8999999999999999998775
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++|++++ ++.+|+.|+++.+.+.+|.+
T Consensus 230 --~~~~~i~~-~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 230 --SGIFNLGT-GRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp --CEEEEESC-SCCBCHHHHHHHC-------
T ss_pred --CCeEEEeC-CCccCHHHHHHHHHHHcCCC
Confidence 77888875 45999999999999999987
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=204.18 Aligned_cols=221 Identities=12% Similarity=0.094 Sum_probs=167.7
Q ss_pred EEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
+|||||||||||++++++|+++ |++|++++|+.... .+++++.+|+.|++++.++++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 67 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF 67 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence 5899999999999999999998 79999999974321 157889999999999999998 899999
Q ss_pred EcCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++.... ...|+.++.+++++|++.+ +++||+ |+ |+.... ..+.+..|...|..+|..+|.
T Consensus 68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~ 146 (317)
T 3ajr_A 68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAEL 146 (317)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHH
T ss_pred ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHH
Confidence 99987531 1267889999999999998 889886 43 443211 113344555667779999998
Q ss_pred HHHH----hCCCeEEEecccccccccccCCC-------CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 144 AIED----AGIPFTYVSANCFAGYFLGGLCQ-------PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 144 ~~~~----~~~~~~i~r~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
+++. .+++++++||+.++++....... .......++....+++++..++++|++|+|++++.++.++..
T Consensus 147 ~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~ 226 (317)
T 3ajr_A 147 LGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226 (317)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcc
Confidence 8763 58999999977777643211100 000012344566677778889999999999999999987643
Q ss_pred ---CCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 213 ---LNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 213 ---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
.+++|++.+ ..+|+.|+++.+.+.+|.
T Consensus 227 ~~~~g~~~~i~~--~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 227 KLVLRNGYNVTA--YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp GCSSCSCEECCS--EEECHHHHHHHHHTTCCS
T ss_pred ccccCceEecCC--ccccHHHHHHHHHHHCCc
Confidence 247888863 489999999999999983
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-28 Score=210.60 Aligned_cols=236 Identities=19% Similarity=0.164 Sum_probs=173.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-------ccCCCeEEEccCCCHHHHHHHhcc-
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-------KEQGAKLVSGSFNDYQSLVNAVKL- 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-------~~~~~~~v~~D~~d~~~l~~~~~~- 75 (312)
|+||||||||+||+++++.|+++|++|++++|+.......+. +.+ ...+++++.+|+.|++++.+++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI---EHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTT---GGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhH---HHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 789999999999999999999999999999998543111111 112 235788999999999999999985
Q ss_pred -CCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCC---ceeec-CC---CCCCcc---cccccCCCCCch
Q 021470 76 -VDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNV---KRFLP-SE---FGTDPA---KMANAMEPGRVT 134 (312)
Q Consensus 76 -~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v---~~~v~-S~---~g~~~~---~~~~~~~p~~~~ 134 (312)
+|+|||+++..... ..|+.++.+++++|.+.+ + ++||+ |+ |+.... ..+.+..|...|
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y 180 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY 180 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHH
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCCCCChh
Confidence 69999999975421 267889999999999988 7 78886 43 443221 113344555667
Q ss_pred hhhHHHHHHHHHH----hCCCeEEEeccccccccccc-CC----CCCc-cCCCCC-eeEEeCCCCcceeeeeHHHHHHHH
Q 021470 135 FDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG-LC----QPGS-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 135 ~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~-~~----~~~~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..+|..+|.+++. .+++++++|+..++++.... +. ...+ ....+. ....+++++..+++++++|+|+++
T Consensus 181 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~ 260 (375)
T 1t2a_A 181 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 260 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHH
Confidence 7799999998864 48999999988776643211 10 0000 001122 334567888899999999999999
Q ss_pred HHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 204 MKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 204 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
+.+++++. +++|++++ ++.+|+.|+++.+.+.+|.++++.
T Consensus 261 ~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 300 (375)
T 1t2a_A 261 WLMLQNDE--PEDFVIAT-GEVHSVREFVEKSFLHIGKTIVWE 300 (375)
T ss_dssp HHHHHSSS--CCCEEECC-SCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCC--CceEEEeC-CCcccHHHHHHHHHHHhCCCcccc
Confidence 99998765 47888875 458999999999999999886543
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=218.08 Aligned_cols=252 Identities=14% Similarity=0.083 Sum_probs=177.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC---CCeEEEEECCCCCCChHHHHHhhhh--------------ccCCCeEEEccCC-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL---GHETYVLHRPEIGVDIEKVQMLLSF--------------KEQGAKLVSGSFN- 64 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~l--------------~~~~~~~v~~D~~- 64 (312)
+|+||||||||+||++++++|++. |++|++++|+.... .......+.+ ...+++++.+|++
T Consensus 73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 689999999999999999999999 89999999985421 1111111111 2368999999998
Q ss_pred -----CHHHHHHHhccCCEEEEcCCCCccc------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---cc
Q 021470 65 -----DYQSLVNAVKLVDVVICAISGVHIR------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---AN 126 (312)
Q Consensus 65 -----d~~~l~~~~~~~d~v~~~~~~~~~~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~ 126 (312)
|.+.+.++++++|+|||+++..... ..|+.++.+++++|++.+ +++||+ |+ |+...... +.
T Consensus 152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp GGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred cccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCcc
Confidence 7789999999999999999976432 378999999999999988 889887 44 33211110 11
Q ss_pred cCCC-----------CCchhhhHHHHHHHHHH----hCCCeEEEeccccccccc-ccCCCC-Ccc--C----CCCCeeEE
Q 021470 127 AMEP-----------GRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFL-GGLCQP-GSI--L----PSKDSVVL 183 (312)
Q Consensus 127 ~~~p-----------~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~-~~~~~~-~~~--~----~~~~~~~~ 183 (312)
+..| .+.|..+|+.+|.++++ .+++++++||+.++|... ...... .+. . ...+..+.
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~ 310 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR 310 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence 1111 12366799999999886 499999999999988532 111010 000 0 01111111
Q ss_pred --eC---C---CCcceeeeeHHHHHHHHHHHhcC----CccCCceEEecCCCCc--CCHHHHHHHHHHHhCCcceeecCC
Q 021470 184 --LG---D---GNPKAIYVDEDDIAMYTMKAIND----PRTLNRTMYLRPPKNI--LSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 184 --~~---~---~~~~~~~v~~~D~a~~~~~~l~~----~~~~~~~~~~~~~~~~--~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
.. + ++..+++++++|+|++++.++.+ +...+++||++++. . +|+.|+++.+.+. |.+++. .++
T Consensus 311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~-~~~~s~~el~~~l~~~-g~~~~~-i~~ 387 (478)
T 4dqv_A 311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH-DDGIGLDEYVDWLIEA-GYPIRR-IDD 387 (478)
T ss_dssp CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC-CSSCSHHHHHHHHHHT-TCSCEE-ESS
T ss_pred cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC-CCCcCHHHHHHHHHHc-CCCccc-CCC
Confidence 11 1 25678999999999999999876 45567899998654 5 9999999999995 777543 236
Q ss_pred HHHHHHHHHh
Q 021470 250 KEEFLASMKE 259 (312)
Q Consensus 250 ~~~~~~~~~~ 259 (312)
.++|...+..
T Consensus 388 ~~~w~~~l~~ 397 (478)
T 4dqv_A 388 FAEWLQRFEA 397 (478)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777776655
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=209.66 Aligned_cols=220 Identities=16% Similarity=0.206 Sum_probs=168.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CC-eEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GH-ETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+|+||||||||+||+++++.|++. |+ +|++++|+ +.+...+ ..+...+++++.+|+.|.+++.++++++|+|
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~-----~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD-----ELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC-----HHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC-----hhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 589999999999999999999999 97 99999998 5554322 3344568999999999999999999999999
Q ss_pred EEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-
Q 021470 80 ICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED- 147 (312)
Q Consensus 80 ~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~- 147 (312)
||+++.... ...|+.++.+++++|.+.+ +++||+ |+... ..|...|..+|..+|.+++.
T Consensus 96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~--------~~p~~~Y~~sK~~~E~~~~~~ 166 (344)
T 2gn4_A 96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKA--------ANPINLYGATKLCSDKLFVSA 166 (344)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGG--------SSCCSHHHHHHHHHHHHHHHG
T ss_pred EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCcc--------CCCccHHHHHHHHHHHHHHHH
Confidence 999987542 1268889999999999999 999987 55221 23446777799999999886
Q ss_pred ------hCCCeEEEecccccccccccCCCCCccCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021470 148 ------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLR 220 (312)
Q Consensus 148 ------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~ 220 (312)
.+++++++||+.++++..............+. ++.+. +++..+++++++|+|++++.+++++. .+++|++.
T Consensus 167 ~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~ 244 (344)
T 2gn4_A 167 NNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPK 244 (344)
T ss_dssp GGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEEC
T ss_pred HHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecC
Confidence 35889999999999853211000000001233 45543 67778899999999999999998764 46677775
Q ss_pred CCCCcCCHHHHHHHHHHHhC
Q 021470 221 PPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 221 ~~~~~~s~~e~~~~~~~~~g 240 (312)
+ + .+|+.|+++.+.+.++
T Consensus 245 ~-~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 245 I-P-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp C-C-EEEHHHHHHHHCTTCC
T ss_pred C-C-cEEHHHHHHHHHHhCC
Confidence 3 3 6999999999987553
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-28 Score=211.61 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=169.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc------cC-CCeEEEccCCCHHHHHHHhcc-
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK------EQ-GAKLVSGSFNDYQSLVNAVKL- 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~------~~-~~~~v~~D~~d~~~l~~~~~~- 75 (312)
++|||||||||||+++++.|++.|++|++++|+.......+. +.+. .. +++++.+|+.|++++.+++++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRI---NHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTT---TTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhh---hhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence 689999999999999999999999999999998543100001 1111 12 788999999999999999985
Q ss_pred -CCEEEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCc-----eeec-CC---CCCCccc--ccccCCCCCc
Q 021470 76 -VDVVICAISGVHI----------RSHQILLQLKLVDAIKEAGNVK-----RFLP-SE---FGTDPAK--MANAMEPGRV 133 (312)
Q Consensus 76 -~d~v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~-----~~v~-S~---~g~~~~~--~~~~~~p~~~ 133 (312)
+|+|||+++.... ...|+.++.+++++|.+.+ ++ +||+ |+ ||..... .+.+..|...
T Consensus 106 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~ 184 (381)
T 1n7h_A 106 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSP 184 (381)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSH
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCc
Confidence 6999999997542 1267889999999999988 76 8886 43 4432111 1334556566
Q ss_pred hhhhHHHHHHHHHH----hCCCeEEEeccccccccccc-CC----CCCc-cCCCCC-eeEEeCCCCcceeeeeHHHHHHH
Q 021470 134 TFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG-LC----QPGS-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 ~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~-~~----~~~~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
|..+|..+|.+++. .+++++++|+..++++.... +. .... ....+. ....+++++..+++++++|+|++
T Consensus 185 Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a 264 (381)
T 1n7h_A 185 YAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA 264 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHH
Confidence 77799999998875 48888888877666543211 10 0000 001122 23456778889999999999999
Q ss_pred HHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 203 TMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 203 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
++.+++++. +++|++++ ++.+|+.|+++.+.+.+|.+.
T Consensus 265 ~~~~~~~~~--~~~~~i~~-~~~~s~~e~~~~i~~~~g~~~ 302 (381)
T 1n7h_A 265 MWLMLQQEK--PDDYVVAT-EEGHTVEEFLDVSFGYLGLNW 302 (381)
T ss_dssp HHHHHTSSS--CCEEEECC-SCEEEHHHHHHHHHHHTTCCG
T ss_pred HHHHHhCCC--CCeEEeeC-CCCCcHHHHHHHHHHHcCCCc
Confidence 999998765 47889875 458999999999999999864
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-27 Score=205.64 Aligned_cols=233 Identities=13% Similarity=0.030 Sum_probs=169.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-------CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-------HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~ 73 (312)
|++|+||||||+||||+++++.|+++| ++|++++|+..... .....+++++.+|+.|++++.+++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP--------AGFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC--------TTCCSEEEEEECCTTSTTHHHHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc--------cccCCceeEEEcCCCCHHHHHHHH
Confidence 446899999999999999999999999 89999999854321 112346889999999999999998
Q ss_pred c-cCCEEEEcCCCCcc---------ccchhHhHHHHHHHHHHhC----CCceeec-CC---CCCCccc---ccccCCCCC
Q 021470 74 K-LVDVVICAISGVHI---------RSHQILLQLKLVDAIKEAG----NVKRFLP-SE---FGTDPAK---MANAMEPGR 132 (312)
Q Consensus 74 ~-~~d~v~~~~~~~~~---------~~~~~~~~~~l~~aa~~~~----~v~~~v~-S~---~g~~~~~---~~~~~~p~~ 132 (312)
+ ++|+|||+++.... ...|+.++.+++++|++.+ .+++||+ |+ |+..... .+.+..|..
T Consensus 84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~ 163 (342)
T 2hrz_A 84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLT 163 (342)
T ss_dssp HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSS
T ss_pred hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcc
Confidence 5 89999999997542 1268889999999998864 3678886 43 4432111 133444556
Q ss_pred chhhhHHHHHHHHHHh----CCCeEEEecccccc-cccccCCCCC-----c-cCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 133 VTFDDKMVVRKAIEDA----GIPFTYVSANCFAG-YFLGGLCQPG-----S-ILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~~----~~~~~i~r~~~~~~-~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.|..+|..+|.+++.. +++++++|++.+++ +......... . ....+....++..++...++++++|+|+
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~ 243 (342)
T 2hrz_A 164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVG 243 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHH
Confidence 6777999999988753 67889999877664 3221100000 0 0123444445555567778999999999
Q ss_pred HHHHHhcCCcc---CCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 202 YTMKAINDPRT---LNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 202 ~~~~~l~~~~~---~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+++.+++.+.. .+++|++. ++.+|+.|+++.+.+.+|.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~ni~--g~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 244 FLIHGAMIDVEKVGPRRNLSMP--GLSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp HHHHHHHSCHHHHCSCCEEECC--CEEEEHHHHHHHHHHHHCHHH
T ss_pred HHHHHHhccccccCCccEEEcC--CCCCCHHHHHHHHHHHcCccc
Confidence 99999987643 46788884 358999999999999999764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-28 Score=205.75 Aligned_cols=223 Identities=14% Similarity=0.092 Sum_probs=153.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||||||||||||++|++.|+++||+|++++|++... -+.. .+...+.++++|+|||++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------------~~~~----~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------------RITW----DELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------EEEH----HHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------------eeec----chhhHhhccCCCEEEEec
Confidence 6899999999999999999999999999999973211 1122 233445678999999999
Q ss_pred CCCcc--------------ccchhHhHHHHHHHHHHhCCCce--eec-C---CCCCCcccc---cccCCCCCchhhhHHH
Q 021470 84 SGVHI--------------RSHQILLQLKLVDAIKEAGNVKR--FLP-S---EFGTDPAKM---ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 84 ~~~~~--------------~~~~~~~~~~l~~aa~~~~~v~~--~v~-S---~~g~~~~~~---~~~~~p~~~~~~~K~~ 140 (312)
+.... ...|+..+.++++++++.+ +++ +|+ | .||...... ++|..|...+...+..
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~-~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~ 138 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAP-QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTK 138 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHH
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC-CCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHH
Confidence 74321 1257888999999999887 554 554 3 355433222 3343332223334444
Q ss_pred HHHHH--HHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEE
Q 021470 141 VRKAI--EDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 141 ~e~~~--~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
.|... ...+++++++||+.++|+.-..+.... .....+....++++++.++|||++|+++++..+++++.. +++||
T Consensus 139 ~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~-~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~yn 216 (298)
T 4b4o_A 139 WEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHML-LPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVLN 216 (298)
T ss_dssp HHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHH-HHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEEE
T ss_pred HHHHHHhhccCCceeeeeeeeEEcCCCCchhHHH-HHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeEE
Confidence 44332 246788999999999876321111100 001122334468889999999999999999999998864 56899
Q ss_pred ecCCCCcCCHHHHHHHHHHHhCCcceeecCCHHH
Q 021470 219 LRPPKNILSQREVVETWEKLIGKTLQKSSISKEE 252 (312)
Q Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 252 (312)
++++ +++|++|+++.+++.+|++. +.++|...
T Consensus 217 ~~~~-~~~t~~e~~~~ia~~lgrp~-~~pvP~~~ 248 (298)
T 4b4o_A 217 GVAP-SSATNAEFAQTFGAALGRRA-FIPLPSAV 248 (298)
T ss_dssp ESCS-CCCBHHHHHHHHHHHHTCCC-CCCBCHHH
T ss_pred EECC-CccCHHHHHHHHHHHhCcCC-cccCCHHH
Confidence 9865 49999999999999999875 34677643
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.2e-28 Score=207.73 Aligned_cols=231 Identities=19% Similarity=0.140 Sum_probs=165.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-h---ccCCCeEE-EccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-F---KEQGAKLV-SGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l---~~~~~~~v-~~D~~d~~~l~~~~~~~d 77 (312)
+|+|||||||||||+++++.|+++|++|++++|+ +.+...+.. + ...+++++ .+|++|++++.++++++|
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----cccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 5799999999999999999999999999999998 444432221 1 12578888 899999999999999999
Q ss_pred EEEEcCCCCccc-------cchhHhHHHHHHHHHH-hCCCceeec-CC---CCCCcc----cc---cc------------
Q 021470 78 VVICAISGVHIR-------SHQILLQLKLVDAIKE-AGNVKRFLP-SE---FGTDPA----KM---AN------------ 126 (312)
Q Consensus 78 ~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~-~~~v~~~v~-S~---~g~~~~----~~---~~------------ 126 (312)
+|||+++..... ..|+.++.+++++|.+ .+ +++||+ |+ ++.... .+ +.
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 164 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccc
Confidence 999999876421 3688999999999985 56 889886 44 322110 00 10
Q ss_pred ----cCCCCCchhhhHHHHHHHHHHh------CCCeEEEecccccccccccCCCC-C-----ccCCCCCeeEEeCCCCcc
Q 021470 127 ----AMEPGRVTFDDKMVVRKAIEDA------GIPFTYVSANCFAGYFLGGLCQP-G-----SILPSKDSVVLLGDGNPK 190 (312)
Q Consensus 127 ----~~~p~~~~~~~K~~~e~~~~~~------~~~~~i~r~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~ 190 (312)
+..|...|..+|..+|.+++.. +++++++||+.++|+........ . .....+....+++++ ..
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (342)
T 1y1p_A 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP 243 (342)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc
Confidence 1122344666999999988652 67889999999988754321100 0 001123333334443 56
Q ss_pred eeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 191 AIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
+++++++|+|++++.++.++...++.+++. +..+|+.|+++.+.+.+|.+
T Consensus 244 ~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~--g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGT--AGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp EEEEEHHHHHHHHHHHHHCTTCCSCEEEEC--CEEECHHHHHHHHHHHCTTS
T ss_pred CCEeEHHHHHHHHHHHHcCcccCCceEEEe--CCCCCHHHHHHHHHHHCCCc
Confidence 899999999999999998765445555443 45899999999999999975
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=206.14 Aligned_cols=237 Identities=19% Similarity=0.154 Sum_probs=169.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc------cCCCeEEEccCCCHHHHHHHhcc-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK------EQGAKLVSGSFNDYQSLVNAVKL- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~------~~~~~~v~~D~~d~~~l~~~~~~- 75 (312)
||+|+||||||+||+++++.|+++|++|++++|+......++. ..+. ..+++++.+|++|++++.+++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV---DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHH---HHHhhccccCCCceEEEECCCCCHHHHHHHHHhc
Confidence 4799999999999999999999999999999997432100111 1111 35788999999999999999985
Q ss_pred -CCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCC---ceeec-CC---CCCCcc---cccccCCCCCch
Q 021470 76 -VDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNV---KRFLP-SE---FGTDPA---KMANAMEPGRVT 134 (312)
Q Consensus 76 -~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v---~~~v~-S~---~g~~~~---~~~~~~~p~~~~ 134 (312)
+|+|||+++..... ..|+.++.+++++|.+.+ + ++||+ |+ ||.... ..+.+..|...|
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y 156 (372)
T 1db3_A 78 QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY 156 (372)
T ss_dssp CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHH
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChH
Confidence 79999999865321 267889999999999988 7 78886 43 443221 113444555667
Q ss_pred hhhHHHHHHHHHH----hCCCeEEEeccccccccccc-CC----CCCc-cCCCCC-eeEEeCCCCcceeeeeHHHHHHHH
Q 021470 135 FDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG-LC----QPGS-ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 135 ~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~-~~----~~~~-~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..+|..+|.+++. .+++++++|+..++++.... +. .... ....+. ....+++++..++++|++|+|+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~ 236 (372)
T 1db3_A 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHH
Confidence 7799999988864 58999999987666543211 00 0000 001222 344568888999999999999999
Q ss_pred HHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 204 MKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 204 ~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
+.+++++. +++|++++ ++.+|+.|+++.+.+.+|.++++.
T Consensus 237 ~~~~~~~~--~~~~ni~~-~~~~s~~e~~~~i~~~~g~~~~~~ 276 (372)
T 1db3_A 237 WMMLQQEQ--PEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFE 276 (372)
T ss_dssp HHTTSSSS--CCCEEECC-CCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred HHHHhcCC--CceEEEcC-CCceeHHHHHHHHHHHhCCCcccc
Confidence 99998764 47888864 558999999999999999876543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=221.81 Aligned_cols=233 Identities=20% Similarity=0.222 Sum_probs=171.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHH-HHHHhccCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQS-LVNAVKLVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~-l~~~~~~~d~v 79 (312)
++|+|+|||||||||++++++|+++ |++|++++|+..... ..+...+++++.+|++|.++ +.++++++|+|
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~-------~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V 386 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-------RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVV 386 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTG-------GGTTCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhh-------hhccCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence 3689999999999999999999998 899999999854321 11234678999999998765 77788999999
Q ss_pred EEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---ccc------C-CCCCchh
Q 021470 80 ICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---ANA------M-EPGRVTF 135 (312)
Q Consensus 80 ~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~~~------~-~p~~~~~ 135 (312)
||+++..... ..|+.++.+++++|++++ ++||+ |+ ||...... +.+ . .|...|.
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~ 464 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS 464 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHH
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcH
Confidence 9999875421 267889999999999987 77776 54 33221110 111 1 2223466
Q ss_pred hhHHHHHHHHHH----hCCCeEEEecccccccccccC----------C-CCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 136 DDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGL----------C-QPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 136 ~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.+|..+|.+++. .+++++++||+.++|+..... . ........+..+.++++++..+++++++|+|
T Consensus 465 ~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva 544 (660)
T 1z7e_A 465 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 544 (660)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHH
Confidence 699999998853 589999999999988653210 0 0000012345666778888899999999999
Q ss_pred HHHHHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 201 MYTMKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
++++.+++++. ..+++|++.+++..+|+.|+++.+.+.+|.+.
T Consensus 545 ~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 545 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp HHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence 99999998764 35678888643237999999999999998753
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=190.90 Aligned_cols=204 Identities=13% Similarity=0.079 Sum_probs=147.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+||||||+||++++++|+++|++|++++|+ +++. ..+...+++++++|+.|+++ +++.++|+|||++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~-----~~~~---~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD-----PQKA---ADRLGATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec-----cccc---ccccCCCceEEecccccccH--hhcccCCEEEECC
Confidence 479999999999999999999999999999998 6555 33345789999999999887 7889999999999
Q ss_pred CCCc---cccchhHhHHHHHHHHHHhCCCceeec-CCCCCCc---c----cccccC--CCCCchhhhHHHHHHHH---HH
Q 021470 84 SGVH---IRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDP---A----KMANAM--EPGRVTFDDKMVVRKAI---ED 147 (312)
Q Consensus 84 ~~~~---~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~---~----~~~~~~--~p~~~~~~~K~~~e~~~---~~ 147 (312)
+... ....|+..+++++++|++++ +++|+ |+.+... . ..+.+. .|...|..+|...|.+. +.
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~ 148 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMN 148 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTC
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhc
Confidence 9852 23478999999999999988 56664 5432211 1 001111 22445556999988542 24
Q ss_pred hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCC
Q 021470 148 AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILS 227 (312)
Q Consensus 148 ~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s 227 (312)
.+++++++||+.++++.... ... .....+ ..++...++++++|+|++++.+++++...+++|++++.. ..+
T Consensus 149 ~~i~~~ivrp~~v~g~~~~~--~~~---~~~~~~---~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~-~~~ 219 (224)
T 3h2s_A 149 ANVNWIGISPSEAFPSGPAT--SYV---AGKDTL---LVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD-LEH 219 (224)
T ss_dssp TTSCEEEEEECSBCCCCCCC--CEE---EESSBC---CCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC----
T ss_pred CCCcEEEEcCccccCCCccc--Cce---eccccc---ccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc-chh
Confidence 68999999999999762111 110 111111 113345689999999999999999998889999998655 444
Q ss_pred H
Q 021470 228 Q 228 (312)
Q Consensus 228 ~ 228 (312)
.
T Consensus 220 ~ 220 (224)
T 3h2s_A 220 H 220 (224)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=191.33 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=169.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+|++|+||||+|+||+++++.|+++|++|++++|+.... ...+++++.+|++|++++.++++++|+||
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi 69 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP-----------AGPNEECVQCDLADANAVNAMVAGCDGIV 69 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC-----------CCTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc-----------cCCCCEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 7788999999999999999999999999999999985432 14678999999999999999999999999
Q ss_pred EcCCCCccc------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc----ccccCCCCCchhhhHHHHHHHHH
Q 021470 81 CAISGVHIR------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK----MANAMEPGRVTFDDKMVVRKAIE 146 (312)
Q Consensus 81 ~~~~~~~~~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~----~~~~~~p~~~~~~~K~~~e~~~~ 146 (312)
|+++..... ..|+.++.+++++|++++ ++++|+ |+ ++..... .+.+..|...|..+|..+|.+++
T Consensus 70 ~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 70 HLGGISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR 148 (267)
T ss_dssp ECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 999975432 378999999999999998 889887 43 3322111 03444555566669999998875
Q ss_pred ----HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCC
Q 021470 147 ----DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 147 ----~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~ 222 (312)
+.+++++++||+.+++.. .+++...+|++++|+++++..+++.++..+.++++.++
T Consensus 149 ~~a~~~g~~~~~vr~~~v~~~~--------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~ 208 (267)
T 3rft_A 149 MYFDKFGQETALVRIGSCTPEP--------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASA 208 (267)
T ss_dssp HHHHHHCCCEEEEEECBCSSSC--------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCC
T ss_pred HHHHHhCCeEEEEEeecccCCC--------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCC
Confidence 468999999999887652 22345578999999999999999988766678888755
Q ss_pred CCcCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHh
Q 021470 223 KNILSQREVVETWEKLIGKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 223 ~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 259 (312)
. ..++.++... +.+|..++ ...++|.+.+..
T Consensus 209 ~-~~~~~~~~~~--~~~g~~p~---~~~~~~~~~l~~ 239 (267)
T 3rft_A 209 N-DAGWWDNSHL--GFLGWKPK---DNAEAFRRHITE 239 (267)
T ss_dssp C-TTCCBCCGGG--GGGCCCCC---CCGGGGHHHHHT
T ss_pred C-CCCcccChhH--HHCCCCCC---CCHHHHHHHHHh
Confidence 4 6676666433 56666432 233556666654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-27 Score=196.40 Aligned_cols=219 Identities=18% Similarity=0.158 Sum_probs=169.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|++|+||||||+||+++++.|++.|++|++++|+.... + ..+++++.+|++|++++.++++++|+|||+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 70 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA----------A-EAHEEIVACDLADAQAVHDLVKDCDGIIHL 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC----------C-CTTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc----------c-CCCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence 47999999999999999999999999999999985321 1 246789999999999999999999999999
Q ss_pred CCCCccc------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcc----cccccCCCCCchhhhHHHHHHHHHH-
Q 021470 83 ISGVHIR------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPA----KMANAMEPGRVTFDDKMVVRKAIED- 147 (312)
Q Consensus 83 ~~~~~~~------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~----~~~~~~~p~~~~~~~K~~~e~~~~~- 147 (312)
++..... ..|+.++.+++++|++.+ +++||+ |+ ++.... ..+.+..|...|..+|..+|.+++.
T Consensus 71 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~ 149 (267)
T 3ay3_A 71 GGVSVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLY 149 (267)
T ss_dssp CSCCSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 9875322 268889999999999988 889886 43 332111 1134445556677799999998764
Q ss_pred ---hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCC
Q 021470 148 ---AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKN 224 (312)
Q Consensus 148 ---~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~ 224 (312)
.+++++++||+.+++.. .+++...++++++|+|++++.++..+...++++++.++.
T Consensus 150 ~~~~gi~~~~lrp~~v~~~~--------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~- 208 (267)
T 3ay3_A 150 YHKFDIETLNIRIGSCFPKP--------------------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN- 208 (267)
T ss_dssp HHTTCCCEEEEEECBCSSSC--------------------CSHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC-
T ss_pred HHHcCCCEEEEeceeecCCC--------------------CCCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc-
Confidence 58999999999876320 012345789999999999999998876545678887554
Q ss_pred cCCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHh
Q 021470 225 ILSQREVVETWEKLIGKTLQKSSISKEEFLASMKE 259 (312)
Q Consensus 225 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 259 (312)
..++.|+.+. +.+|.+++ ++.+++.+.+.+
T Consensus 209 ~~~~~d~~~~--~~lg~~p~---~~~~~~~~~~~~ 238 (267)
T 3ay3_A 209 TESWWDNDKS--AFLGWVPQ---DSSEIWREEIEQ 238 (267)
T ss_dssp SSCCBCCGGG--GGGCCCCC---CCGGGGHHHHHH
T ss_pred cccccCHHHH--HHcCCCCC---CCHHHHHHHHHh
Confidence 7888888887 78887654 466666666654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=215.85 Aligned_cols=222 Identities=17% Similarity=0.140 Sum_probs=151.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|||||||||||++|++.|+++|++|++++|+... .+.+.+|+.+ .+.++++++|+|||+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~----------------~~~v~~d~~~--~~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK----------------PGKRFWDPLN--PASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------------TTCEECCTTS--CCTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC----------------ccceeecccc--hhHHhcCCCCEEEEC
Confidence 5799999999999999999999999999999998432 1236778764 345677899999999
Q ss_pred CCCCcc-----------ccchhHhHHHHHHH-HHHhCCCceeec-CC---CCC-Ccccc--cccCCCCCchhhhHHHHHH
Q 021470 83 ISGVHI-----------RSHQILLQLKLVDA-IKEAGNVKRFLP-SE---FGT-DPAKM--ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 83 ~~~~~~-----------~~~~~~~~~~l~~a-a~~~~~v~~~v~-S~---~g~-~~~~~--~~~~~p~~~~~~~K~~~e~ 143 (312)
++.... ...|+.++.+++++ +++.+ +++||+ |+ ||. ..... ++...|...|...|...|.
T Consensus 209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~ 287 (516)
T 3oh8_A 209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEH 287 (516)
T ss_dssp CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHH
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHH
Confidence 997521 12588999999999 55556 899987 43 441 11111 1111233444447777775
Q ss_pred HH---HHhCCCeEEEeccccccccc---ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceE
Q 021470 144 AI---EDAGIPFTYVSANCFAGYFL---GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217 (312)
Q Consensus 144 ~~---~~~~~~~~i~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~ 217 (312)
++ ...+++++++||+.++|+.. ..+... ...+....+++++..+++++++|+|++++.++.++. .+++|
T Consensus 288 ~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~----~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~g~~ 362 (516)
T 3oh8_A 288 ATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTL----FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ-ISGPI 362 (516)
T ss_dssp TTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHT----TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT-CCEEE
T ss_pred HHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHH----HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc-cCCcE
Confidence 54 35789999999999998642 111111 112222356788899999999999999999999876 45688
Q ss_pred EecCCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 218 YLRPPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 218 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
|++++ +.+|+.|+++.+++.+|.+. ...+|.
T Consensus 363 ni~~~-~~~s~~el~~~i~~~~g~~~-~~~~p~ 393 (516)
T 3oh8_A 363 NAVAP-NPVSNADMTKILATSMHRPA-FIQIPS 393 (516)
T ss_dssp EESCS-CCEEHHHHHHHTTC-------------
T ss_pred EEECC-CCCCHHHHHHHHHHHhCCCC-CCCCCH
Confidence 99865 59999999999999999875 334444
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.7e-26 Score=185.70 Aligned_cols=197 Identities=16% Similarity=0.206 Sum_probs=144.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+||+|+||||+|+||+++++.|+++| ++|++++|+. ++. ..+...+++++++|++|++++.++++++|+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~-----~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP-----AKI---HKPYPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG-----GGS---CSSCCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh-----hhh---cccccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 567899999999999999999999999 9999999983 322 3334568999999999999999999999999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCccccc----ccCCCCCchhhhHHHHHHHHHHhCCCeEE
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMA----NAMEPGRVTFDDKMVVRKAIEDAGIPFTY 154 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~----~~~~p~~~~~~~K~~~e~~~~~~~~~~~i 154 (312)
||+++.... ...++++++++++.+ +++||+ |+.+....... ........++..+..+|+.++..++++++
T Consensus 93 v~~a~~~~~----~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 167 (236)
T 3qvo_A 93 YANLTGEDL----DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTI 167 (236)
T ss_dssp EEECCSTTH----HHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEE
T ss_pred EEcCCCCch----hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEE
Confidence 999986431 345788999999999 899987 55443221100 00001123455777888889899999999
Q ss_pred EecccccccccccCCCCCccCCCCCeeEEeCCC-CcceeeeeHHHHHHHHHHHhcCCc-cCCceEEecCCC
Q 021470 155 VSANCFAGYFLGGLCQPGSILPSKDSVVLLGDG-NPKAIYVDEDDIAMYTMKAINDPR-TLNRTMYLRPPK 223 (312)
Q Consensus 155 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~~~~~~~ 223 (312)
+|||.+++...... .....+ .....+++.+|+|++++.++.++. ..++.|++.++.
T Consensus 168 vrPg~i~~~~~~~~-------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~ 225 (236)
T 3qvo_A 168 LRPAWLTDEDIIDY-------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG 225 (236)
T ss_dssp EEECEEECCSCCCC-------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred EeCCcccCCCCcce-------------EEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence 99999887532211 111111 112368999999999999999876 678889997654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-27 Score=206.95 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=159.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|+||||||||++|++++++|+++|+ +|++++|+ .|++++.++++++|+|||+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~ 53 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL 53 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence 5899999999999999999999998 88877662 5788899999999999999
Q ss_pred CCCCccc------cchhHhHHHHHHHHHHhCCCc-eeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH----hCC
Q 021470 83 ISGVHIR------SHQILLQLKLVDAIKEAGNVK-RFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED----AGI 150 (312)
Q Consensus 83 ~~~~~~~------~~~~~~~~~l~~aa~~~~~v~-~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~----~~~ 150 (312)
++..... ..|+..+.+++++|++++ ++ +||+ |+.+... ..+|..+|..+|+++++ .++
T Consensus 54 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~---------~~~Y~~sK~~~E~~~~~~~~~~g~ 123 (369)
T 3st7_A 54 AGVNRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ---------DNPYGESKLQGEQLLREYAEEYGN 123 (369)
T ss_dssp CCSBCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS---------CSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC---------CCCchHHHHHHHHHHHHHHHHhCC
Confidence 9875432 368999999999999998 77 8887 5433211 25677799999999876 799
Q ss_pred CeEEEecccccccccccCCCCC----c-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC-CceEEecCCCC
Q 021470 151 PFTYVSANCFAGYFLGGLCQPG----S-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL-NRTMYLRPPKN 224 (312)
Q Consensus 151 ~~~i~r~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~-~~~~~~~~~~~ 224 (312)
+++++||+.++|+......... . ....+..+. ..+++..+++++++|+|++++.++.++... +++|++.+ ++
T Consensus 124 ~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~-~~ 201 (369)
T 3st7_A 124 TVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPN-VF 201 (369)
T ss_dssp CEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSC-CE
T ss_pred CEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCC-CC
Confidence 9999999999987543211000 0 011233333 346788899999999999999999988654 77888864 46
Q ss_pred cCCHHHHHHHHHHHhCCcceee
Q 021470 225 ILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 225 ~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
.+|+.|+++.+++.+|.+.++.
T Consensus 202 ~~s~~e~~~~~~~~~g~~~~~~ 223 (369)
T 3st7_A 202 KVTLGEIVDLLYKFKQSRLDRT 223 (369)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTC
T ss_pred ceeHHHHHHHHHHHhCCCcccc
Confidence 9999999999999999875443
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-25 Score=179.89 Aligned_cols=196 Identities=13% Similarity=0.162 Sum_probs=145.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEECCCCCCChH-HHHHhhhh--ccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASL-ALGHETYVLHRPEIGVDIE-KVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|||++|+||||+|+||+++++.|+ +.|++|++++|+ ++ +. +.+ ...+++++++|++|++++.++++++
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~-----~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 74 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ-----LKTRI---PPEIIDHERVTVIEGSFQNPGXLEQAVTNA 74 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHS---CHHHHTSTTEEEEECCTTCHHHHHHHHTTC
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC-----ccccc---hhhccCCCceEEEECCCCCHHHHHHHHcCC
Confidence 445679999999999999999999 899999999998 55 43 223 4578999999999999999999999
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc----cccCCCCC-chhhhHHHHHHHHHHhCC
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM----ANAMEPGR-VTFDDKMVVRKAIEDAGI 150 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~----~~~~~p~~-~~~~~K~~~e~~~~~~~~ 150 (312)
|+|||+++.. |+. ++++++++++.+ ++++|+ |+.+...... ........ .|..+|..+|+++++.++
T Consensus 75 d~vv~~ag~~-----n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i 147 (221)
T 3r6d_A 75 EVVFVGAMES-----GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNL 147 (221)
T ss_dssp SEEEESCCCC-----HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCS
T ss_pred CEEEEcCCCC-----Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCC
Confidence 9999999865 366 999999999998 899886 5444322110 00000112 566699999999999999
Q ss_pred CeEEEecccccccccccCCCCCccCCCCCeeEEeCCC-CcceeeeeHHHHHHHHHHHh--cCCc-cCCceEEecCCC
Q 021470 151 PFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDG-NPKAIYVDEDDIAMYTMKAI--NDPR-TLNRTMYLRPPK 223 (312)
Q Consensus 151 ~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~D~a~~~~~~l--~~~~-~~~~~~~~~~~~ 223 (312)
+++++|||.++++..... ......+ .....+++.+|+|++++.++ .++. ..++.+.+.+++
T Consensus 148 ~~~~vrpg~v~~~~~~~~------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 148 NYTILRLTWLYNDPEXTD------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp EEEEEEECEEECCTTCCC------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred CEEEEechhhcCCCCCcc------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 999999999987521110 1111111 11224899999999999999 7765 557777776443
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=199.42 Aligned_cols=231 Identities=17% Similarity=0.200 Sum_probs=157.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+++||||||+||||++++++|+++|++|++++|+... ..+...+..+. ..+++++++|+.|++++.++++++|+||
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN--VKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC--HHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch--hHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 5799999999999999999999999999999997432 12222211221 1257899999999999999999999999
Q ss_pred EcCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeec-CCCC----CCcc-cc--cccC----------CCCCc
Q 021470 81 CAISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFG----TDPA-KM--ANAM----------EPGRV 133 (312)
Q Consensus 81 ~~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g----~~~~-~~--~~~~----------~p~~~ 133 (312)
|+++.... ...|+.++.+++++|++++.+++||+ |+.+ .... .. ++.. .|...
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 162 (337)
T 2c29_D 83 HVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWM 162 (337)
T ss_dssp ECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred EeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccch
Confidence 99986431 12578899999999998865788887 4432 1110 00 1100 12234
Q ss_pred hhhhHHHHHHHHH----HhCCCeEEEecccccccccccCCCCCccC----CCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLCQPGSIL----PSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..+|.++. ..+++++++||+.++|+............ ..+... .++.. ....++|++|+|++++.
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~ 240 (337)
T 2c29_D 163 YFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIY 240 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHH
Confidence 5569999998774 36899999999999987543211100000 001111 11111 12459999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
+++++.. ++.|++ +++ .+|+.|+++.+.+.++
T Consensus 241 ~~~~~~~-~~~~~~-~~~-~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 241 LFENPKA-EGRYIC-SSH-DCIILDLAKMLREKYP 272 (337)
T ss_dssp HHHCTTC-CEEEEE-CCE-EEEHHHHHHHHHHHCT
T ss_pred HhcCccc-CceEEE-eCC-CCCHHHHHHHHHHHCC
Confidence 9987643 446654 344 6899999999998874
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=198.19 Aligned_cols=231 Identities=19% Similarity=0.161 Sum_probs=158.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+|+|||||||||||++|++.|+++|++|++++|+..... +...+..+. ..+++++++|+.|++++.++++++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK--KVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTT--TTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhh--hHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999999754321 111111121 34788999999999999999999999999
Q ss_pred cCCCCcc---------ccchhHhHHHHHHHHHHhCCCceeec-CCCCC-----------Ccccccc--------cCCCCC
Q 021470 82 AISGVHI---------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGT-----------DPAKMAN--------AMEPGR 132 (312)
Q Consensus 82 ~~~~~~~---------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~-----------~~~~~~~--------~~~p~~ 132 (312)
+|+.... ...|+.++.+++++|++++.+++||+ |+.+. ..++ +. +..|..
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E-~~~~~~~~~~~~~~~~ 165 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDE-KNWTDIEFLTSAKPPT 165 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCT-TTTTCC-------CCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccCh-hhccchhhccccCCcc
Confidence 9986421 12688999999999998843889887 54220 0011 11 111112
Q ss_pred -chhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCcc----CCCCCeeEEeCC------CCcceeeeeHH
Q 021470 133 -VTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGSI----LPSKDSVVLLGD------GNPKAIYVDED 197 (312)
Q Consensus 133 -~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~v~~~ 197 (312)
.|..+|..+|.++.. .+++++++||+.++|+........... ...+... .++. ++..++++|++
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~ 244 (338)
T 2rh8_A 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVE 244 (338)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHH
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHH
Confidence 366699998887753 589999999999998754321110000 0011111 1110 01224899999
Q ss_pred HHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 198 DIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 198 D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
|+|++++.+++++.. ++.|++. ++ .+|+.|+++.+.+.++
T Consensus 245 Dva~a~~~~~~~~~~-~~~~~~~-~~-~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 245 DVCRAHIFVAEKESA-SGRYICC-AA-NTSVPELAKFLSKRYP 284 (338)
T ss_dssp HHHHHHHHHHHCTTC-CEEEEEC-SE-EECHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCCc-CCcEEEe-cC-CCCHHHHHHHHHHhCC
Confidence 999999999987643 4566664 44 7899999999998875
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=187.29 Aligned_cols=212 Identities=14% Similarity=0.072 Sum_probs=159.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v~~ 81 (312)
|+|+||||||+||++++++|++ |++|++++|+... . .+ +.+|+.|++++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~---------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI---------Q----GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC---------T----TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC---------C----CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 4799999999999999999995 8999999998421 1 22 78999999999999986 999999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc--ccccCCCCCchhhhHHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK--MANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~--~~~~~~p~~~~~~~K~~~e~~~ 145 (312)
+++..... ..|+.++.+++++|++.+ + ++|+ |+ |+..... .+.+..|...|..+|..+|.++
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~ 141 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFA 141 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99976421 267889999999999988 6 6765 43 3222111 0334445556666999999999
Q ss_pred HHhCCCeEEEeccccccc--ccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCC
Q 021470 146 EDAGIPFTYVSANCFAGY--FLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPK 223 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~ 223 (312)
+. .+++++||+.++|. +...+.. ....+..+...++ .+++++++|+|++++.+++++. +++|++.+
T Consensus 142 ~~--~~~~~iR~~~v~G~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~-- 209 (273)
T 2ggs_A 142 LQ--DDSLIIRTSGIFRNKGFPIYVYK---TLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG-- 209 (273)
T ss_dssp CC--TTCEEEEECCCBSSSSHHHHHHH---HHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC--
T ss_pred hC--CCeEEEeccccccccHHHHHHHH---HHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC--
Confidence 87 88999999998862 1111100 0012344445443 7899999999999999998764 45888875
Q ss_pred CcCCHHHHHHHHHHHhCCcceee
Q 021470 224 NILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 224 ~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
+.+|+.|+++.+.+.+|.+.++.
T Consensus 210 ~~~s~~e~~~~~~~~~g~~~~~~ 232 (273)
T 2ggs_A 210 ERISRFELALKIKEKFNLPGEVK 232 (273)
T ss_dssp CCEEHHHHHHHHHHHTTCCSCEE
T ss_pred CcccHHHHHHHHHHHhCCChhhc
Confidence 59999999999999999886543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-26 Score=192.69 Aligned_cols=228 Identities=17% Similarity=0.184 Sum_probs=154.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC-CCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHR-PEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|||||||||||+++++.|+++|++|++++| +.... .+...+..+. ..+++++++|++|++++.++++++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERK--RDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccch--hHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 68999999999999999999999999999998 53210 0011111111 1246788999999999999999999999
Q ss_pred EcCCCCcc---------ccchhHhHHHHHHHHHHh-CCCceeec-CCCC----CCcc-cc--cc---------cCCCCC-
Q 021470 81 CAISGVHI---------RSHQILLQLKLVDAIKEA-GNVKRFLP-SEFG----TDPA-KM--AN---------AMEPGR- 132 (312)
Q Consensus 81 ~~~~~~~~---------~~~~~~~~~~l~~aa~~~-~~v~~~v~-S~~g----~~~~-~~--~~---------~~~p~~- 132 (312)
|+++.... ...|+.++.+++++|++. + +++||+ |+.+ .... .. ++ +..|..
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~ 158 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGW 158 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccc
Confidence 99975321 125889999999999988 6 889887 4322 1110 00 00 011222
Q ss_pred chhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCcc----CCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGSI----LPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..+|.++.+ .+++++++||+.++|+........... ...+.... ++. ...++++++|+|++++
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~i~v~Dva~a~~ 235 (322)
T 2p4h_X 159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGV--TRFHMVHVDDVARAHI 235 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCE--EEEEEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcC--CCcCEEEHHHHHHHHH
Confidence 355699999887753 589999999999998754321110000 00111111 111 2348999999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.+++.+... +.|+ ++ ++.+|+.|+++.+.+..+
T Consensus 236 ~~~~~~~~~-g~~~-~~-~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 236 YLLENSVPG-GRYN-CS-PFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HHHHSCCCC-EEEE-CC-CEEEEHHHHHHHHHHHCT
T ss_pred HHhhCcCCC-CCEE-Ec-CCCCCHHHHHHHHHHhCC
Confidence 999876533 4566 44 458999999999998764
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=186.66 Aligned_cols=188 Identities=16% Similarity=0.210 Sum_probs=145.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+|+|+||||||++|++++++|+++|+ +|++++|+... ...+++++.+|+.|++++.+++ +|+||
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------------~~~~~~~~~~D~~~~~~~~~~~--~d~vi 70 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------------EHPRLDNPVGPLAELLPQLDGS--IDTAF 70 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------------CCTTEECCBSCHHHHGGGCCSC--CSEEE
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------------cCCCceEEeccccCHHHHHHhh--hcEEE
Confidence 46999999999999999999999998 99999998432 1357888999999999888887 99999
Q ss_pred EcCCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCC
Q 021470 81 CAISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIP 151 (312)
Q Consensus 81 ~~~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~ 151 (312)
|+++.... ...|+..+.+++++|++.+ ++++|+ |+.+.... |...|..+|..+|++++..+++
T Consensus 71 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~-------~~~~y~~sK~~~e~~~~~~~~~ 142 (215)
T 2a35_A 71 CCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK-------SSIFYNRVKGELEQALQEQGWP 142 (215)
T ss_dssp ECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------CSSHHHHHHHHHHHHHTTSCCS
T ss_pred ECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC-------CccHHHHHHHHHHHHHHHcCCC
Confidence 99987542 1367888999999999998 899887 66544321 2356667999999999999999
Q ss_pred -eEEEeccccccccccc-CCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecC
Q 021470 152 -FTYVSANCFAGYFLGG-LCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 152 -~~i~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
++++||+.++++.... +... ......+ ..+ ..+++++++|+|++++.++.++. ++.|++.+
T Consensus 143 ~~~~vrp~~v~g~~~~~~~~~~----~~~~~~~-~~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~ 205 (215)
T 2a35_A 143 QLTIARPSLLFGPREEFRLAEI----LAAPIAR-ILP--GKYHGIEACDLARALWRLALEEG--KGVRFVES 205 (215)
T ss_dssp EEEEEECCSEESTTSCEEGGGG----TTCCCC-------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEH
T ss_pred eEEEEeCceeeCCCCcchHHHH----HHHhhhh-ccC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcH
Confidence 9999999999874331 1111 1111111 122 26799999999999999999875 67888863
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=179.77 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=142.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++|+|+||||+|+||++++++|+++|+ +|++++|+.... ..+...+++++.+|++|++++.++++++|+|
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~--------~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 88 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF--------DEEAYKNVNQEVVDFEKLDDYASAFQGHDVG 88 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC--------CSGGGGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc--------cccccCCceEEecCcCCHHHHHHHhcCCCEE
Confidence 357899999999999999999999999 999999985433 1112346899999999999999999999999
Q ss_pred EEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCC
Q 021470 80 ICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIP 151 (312)
Q Consensus 80 ~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~ 151 (312)
||+++.... ...|+..+.++++++++.+ ++++|+ |+.+.... +...|..+|..+|.+++..+++
T Consensus 89 i~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~-------~~~~Y~~sK~~~e~~~~~~~~~ 160 (242)
T 2bka_A 89 FCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS-------SNFLYLQVKGEVEAKVEELKFD 160 (242)
T ss_dssp EECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------CSSHHHHHHHHHHHHHHTTCCS
T ss_pred EECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC-------CcchHHHHHHHHHHHHHhcCCC
Confidence 999997542 1267888999999999988 889886 66544321 1345666999999999999995
Q ss_pred -eEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCC
Q 021470 152 -FTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLN 214 (312)
Q Consensus 152 -~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~ 214 (312)
++++||+.++++.................. .. ......+++++|+|++++.++.++...+
T Consensus 161 ~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~dva~~~~~~~~~~~~~~ 221 (242)
T 2bka_A 161 RYSVFRPGVLLCDRQESRPGEWLVRKFFGSL--PD-SWASGHSVPVVTVVRAMLNNVVRPRDKQ 221 (242)
T ss_dssp EEEEEECCEEECTTGGGSHHHHHHHHHHCSC--CT-TGGGGTEEEHHHHHHHHHHHHTSCCCSS
T ss_pred CeEEEcCceecCCCCCCcHHHHHHHHhhccc--Cc-cccCCcccCHHHHHHHHHHHHhCccccC
Confidence 999999999887432110000000000000 00 0012358999999999999999876433
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.2e-22 Score=164.30 Aligned_cols=223 Identities=13% Similarity=0.089 Sum_probs=152.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhcc-CCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKE-QGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++|+||||+|+||++++++|+++|++|++++|+ .++.+. .+.+.. .++.++++|++|++++.++++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----hhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999997 444322 222322 268999999999999988876
Q ss_pred -cCCEEEEcCCCCcc----------------ccchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHI----------------RSHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~----------------~~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++.... ...|+.++.++++++... + ..++|+ |+....... + .+..
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~-~~~~ 165 (278)
T 2bgk_A 91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG---E-GVSH 165 (278)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC---T-TSCH
T ss_pred CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCC---C-CCCc
Confidence 79999999986431 015777788888887764 4 567776 543322111 0 0223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .+++++++|||.+.+............ . ...+ ..........+++++|+|++++.
T Consensus 166 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~dva~~~~~ 242 (278)
T 2bgk_A 166 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS-R-VEEL-AHQAANLKGTLLRAEDVADAVAY 242 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHH-H-HHHH-HHHTCSSCSCCCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchh-H-HHHh-hhcccccccccCCHHHHHHHHHH
Confidence 455599998887764 488999999999987654322110000 0 0000 00011122458899999999999
Q ss_pred HhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHh
Q 021470 206 AINDPR--TLNRTMYLRPPKNILSQREVVETWEKLI 239 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 239 (312)
++..+. ..|+.+++.| +..+++.|+++.+.+.+
T Consensus 243 l~~~~~~~~~G~~~~v~g-g~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 243 LAGDESKYVSGLNLVIDG-GYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHSGGGTTCCSCEEEEST-TGGGCCTHHHHHSCSCC
T ss_pred HcCcccccCCCCEEEECC-cccccCCccchhhhhhc
Confidence 997643 2367888875 45899999999876543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-22 Score=165.87 Aligned_cols=225 Identities=16% Similarity=0.127 Sum_probs=147.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+++++||||+|+||++++++|+++|++|++++|+. ++...+......+++++++|++|++++.++++ +
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT-----EALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG-----GGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999983 33322222224578999999999999988876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|+|||+++..... ..|+.+ ++.++..+++.+ ..++|+ |+..... +..+...|..
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~~Y~~ 153 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL-----SFAGFSAYSA 153 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC-----CCTTCHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC-----CCCCchHHHH
Confidence 89999999965321 156777 666666667777 778886 5533221 1223345555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCC-----eeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKD-----SVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
+|..++.+.+. .++++++++||.+..+................ .............+.+++|+|++++
T Consensus 154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~ 233 (281)
T 3m1a_A 154 TKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIR 233 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHH
Confidence 99998887653 57899999999987665432111000000000 0000111122346789999999999
Q ss_pred HHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 205 KAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.+++.+. .+..|++.+ +......+....+.+.++
T Consensus 234 ~~~~~~~-~~~~~~l~s-~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 234 LALDTEK-TPLRLALGG-DAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHSSS-CCSEEEESH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-CCeEEecCc-hHHHHHHHHHHHHHHHHH
Confidence 9998875 456777753 435556666666665443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=163.18 Aligned_cols=205 Identities=12% Similarity=0.081 Sum_probs=138.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----~~d~ 78 (312)
|++|+||||+|+||+++++.|+++|++|++++|+.... .. .+++|+.|++++.++++ ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~---~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI------------EA---DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------------EC---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc------------cc---cccCCcccHHHHHHHHHHcCCCccE
Confidence 46899999999999999999999999999999984321 11 16789999999998886 8999
Q ss_pred EEEcCCCCc-cc------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccc---------------------c
Q 021470 79 VICAISGVH-IR------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKM---------------------A 125 (312)
Q Consensus 79 v~~~~~~~~-~~------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~---------------------~ 125 (312)
|||+++... .. ..|+.++.++++++... + .+++|+ |+........ +
T Consensus 66 vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T 2dkn_A 66 LVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE 144 (255)
T ss_dssp EEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred EEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence 999999765 21 26888889999987765 4 577776 4422211100 0
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
.+..+...|..+|..++.+++. .+++++++||+.+.++......... .......... + ....+++++|
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~d 219 (255)
T 2dkn_A 145 QQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP---RYGESTRRFV-A-PLGRGSEPRE 219 (255)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT---TTHHHHHSCC-C-TTSSCBCHHH
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch---hhHHHHHHHH-H-HhcCCCCHHH
Confidence 0012223455599999887764 4899999999999887543321100 0000000010 1 3347899999
Q ss_pred HHHHHHHHhcCCc--cCCceEEecCCCCcCCHH
Q 021470 199 IAMYTMKAINDPR--TLNRTMYLRPPKNILSQR 229 (312)
Q Consensus 199 ~a~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~ 229 (312)
+|++++.++.++. ..|+.|++.| +..++++
T Consensus 220 va~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~ 251 (255)
T 2dkn_A 220 VAEAIAFLLGPQASFIHGSVLFVDG-GMDALMR 251 (255)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST-THHHHHC
T ss_pred HHHHHHHHhCCCcccceeeEEEecC-CeEeeee
Confidence 9999999998762 3467888864 4355443
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=157.41 Aligned_cols=221 Identities=12% Similarity=0.110 Sum_probs=136.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---c--cCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---K--EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~--~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ . ..++.++++|++|++++.++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 222 1 2357889999999999988877
Q ss_pred -----cCCEEEEcCCCCcc----------c--------cchhHhHHHHHHHHHHh----CCCceeec-CCCCC-Cccccc
Q 021470 75 -----LVDVVICAISGVHI----------R--------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGT-DPAKMA 125 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~----------~--------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~-~~~~~~ 125 (312)
++|++||+++.... . ..|+.++.++++++... + .++|+ |+... ...
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~--- 155 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHA--- 155 (278)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSC---
T ss_pred HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccC---
Confidence 79999999986431 0 15666777777776653 4 56665 55432 211
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe----eEEeCCCCcceeee
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS----VVLLGDGNPKAIYV 194 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v 194 (312)
..+...|..+|..++.+.+. .++++++++||.+..+......... ..... ............+.
T Consensus 156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~ 230 (278)
T 1spx_A 156 --TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE---ETSKKFYSTMATMKECVPAGVMG 230 (278)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----------------HHHHHHHHHHCTTSSCB
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc---hhhhhhhHHHHHHHhcCCCcCCC
Confidence 11123455599998887753 5899999999998776533211000 00000 00000001112478
Q ss_pred eHHHHHHHHHHHhcCCc---cCCceEEecCCCCcCCHHHHHHHHHHHh
Q 021470 195 DEDDIAMYTMKAINDPR---TLNRTMYLRPPKNILSQREVVETWEKLI 239 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~~~---~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 239 (312)
+++|+|++++.++..+. ..|+.+++.| +..+++.|+++.+++++
T Consensus 231 ~~~dvA~~v~~l~s~~~~~~~tG~~~~vdg-G~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 231 QPQDIAEVIAFLADRKTSSYIIGHQLVVDG-GSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEEST-TGGGC------------
T ss_pred CHHHHHHHHHHHcCccccCcccCcEEEECC-CcccccCcccccHHHHh
Confidence 99999999999987653 2377778865 45899999999988764
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-20 Score=153.67 Aligned_cols=207 Identities=11% Similarity=0.089 Sum_probs=141.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++.+|++|++++.++++
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 444322 12222 3468889999999999988876
Q ss_pred --cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR-------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+.++.++++++. +.+ ..++|+ |+..... +..+...|
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~~Y 159 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN-----KNINMTSY 159 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC-----CCTTCHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC-----CCCCCccc
Confidence 799999999865421 157777777777774 456 678776 5433221 11223455
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++++++||.+.++........... . . ...+.....+.+++|+|++++.++
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~--~---~~~~~~~~~~~~~~dva~~~~~l~ 232 (255)
T 1fmc_A 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE--Q--K---MLQHTPIRRLGQPQDIANAALFLC 232 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHH--H--H---HHHTCSSCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHH--H--H---HHhcCCcccCCCHHHHHHHHHHHh
Confidence 5599999887764 378899999999987654321110000 0 0 000111235789999999999999
Q ss_pred cCCcc--CCceEEecCCCCcCCH
Q 021470 208 NDPRT--LNRTMYLRPPKNILSQ 228 (312)
Q Consensus 208 ~~~~~--~~~~~~~~~~~~~~s~ 228 (312)
..+.. .|+.|++.| +..+|+
T Consensus 233 ~~~~~~~~G~~~~v~g-g~~~s~ 254 (255)
T 1fmc_A 233 SPAASWVSGQILTVSG-GGVQEL 254 (255)
T ss_dssp SGGGTTCCSCEEEEST-TSCCCC
T ss_pred CCccccCCCcEEEECC-ceeccC
Confidence 76532 367888865 446553
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=9.3e-21 Score=160.09 Aligned_cols=223 Identities=13% Similarity=0.082 Sum_probs=146.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc---cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK---EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 100 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 444322 12221 4568999999999999888876
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+.++.++++++... +...++|+ |+.... .+..+..
T Consensus 101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~-----~~~~~~~ 175 (302)
T 1w6u_A 101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE-----TGSGFVV 175 (302)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH-----HCCTTCH
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc-----cCCCCcc
Confidence 459999999954321 15677777777776542 21467775 443211 1112234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccccc-ccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGY-FLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..++.+.+. .+++++++|||.+.+. ......... ..............+.+++|+|++++
T Consensus 176 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~dva~~~~ 249 (302)
T 1w6u_A 176 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG------TFEKEMIGRIPCGRLGTVEELANLAA 249 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS------HHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch------hhHHHHHhcCCcCCCCCHHHHHHHHH
Confidence 455599999887763 5788999999998765 222111100 00000011111235789999999999
Q ss_pred HHhcCCcc--CCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 205 KAINDPRT--LNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 205 ~~l~~~~~--~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
.++..+.. .|+.+++.| +..++..|+++.+.+..|+.
T Consensus 250 ~l~~~~~~~~~G~~~~v~g-g~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 250 FLCSDYASWINGAVIKFDG-GEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp HHTSGGGTTCCSCEEEEST-THHHHHHSTTGGGGGCCHHH
T ss_pred HHcCCcccccCCCEEEECC-CeeeccCCccccchhhcccc
Confidence 99876432 467788864 44778888877777665543
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-19 Score=145.25 Aligned_cols=194 Identities=14% Similarity=0.123 Sum_probs=134.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ...+.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-hcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999998 5544322 223 2347889999999999988887
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.++ +.++..+++.+ ..++|+ |+....... .+...|.
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~ 154 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT-----VACHGYT 154 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----TTBHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCC-----CCchhHH
Confidence 799999999965321 1456665 44555556666 678776 543322111 1223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++++++||.+.++... ... . . +. ......+.+++|+|++++.++.
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~------~-~-~~----~~~~~~~~~~~dvA~~v~~l~s 221 (260)
T 1nff_A 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP------E-D-IF----QTALGRAAEPVEVSNLVVYLAS 221 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC------T-T-CS----CCSSSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch------h-h-HH----hCccCCCCCHHHHHHHHHHHhC
Confidence 599998877653 5889999999999876543 110 0 0 00 0111246789999999999987
Q ss_pred CCcc--CCceEEecC
Q 021470 209 DPRT--LNRTMYLRP 221 (312)
Q Consensus 209 ~~~~--~~~~~~~~~ 221 (312)
.+.. .|+.+++.|
T Consensus 222 ~~~~~~~G~~~~v~g 236 (260)
T 1nff_A 222 DESSYSTGAEFVVDG 236 (260)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCcCCEEEECC
Confidence 6432 367788864
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.1e-20 Score=150.79 Aligned_cols=209 Identities=13% Similarity=0.118 Sum_probs=139.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.........+.++++|++|++++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADID-----IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999999998 555543322224578899999999999988876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.++.++++++... +.-.++|+ |+...... ..+...|..
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~a 157 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-----EALVAIYCA 157 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-----CCCChHHHH
Confidence 99999999975421 16777788888877643 21235665 54332211 112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCC---CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQP---GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+. .++++..++||.+.+......... ..............+......+.+++|+|++++.+
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L 237 (259)
T 4e6p_A 158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL 237 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence 99998887764 478899999999877543221000 00000111111122223345688999999999998
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..... .|+.+++.|
T Consensus 238 ~s~~~~~itG~~i~vdg 254 (259)
T 4e6p_A 238 ASAESDYIVSQTYNVDG 254 (259)
T ss_dssp TSGGGTTCCSCEEEEST
T ss_pred hCCccCCCCCCEEEECc
Confidence 875432 367888864
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-19 Score=146.93 Aligned_cols=201 Identities=13% Similarity=0.125 Sum_probs=127.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHh------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAV------ 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~------ 73 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++.+|+.|++++.+++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 444322 12222 346788999999999888877
Q ss_pred --ccCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 74 --KLVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 74 --~~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
.++|+|||+++..... ..|+.++.++++++ ++.+ ..++|+ |+...... ..+..
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~ 162 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVS-----ASVGS 162 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC---------------CC
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccC-----CCCCc
Confidence 4689999999864321 16777888888887 4566 678876 55332211 11234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++++++||.+.++.......... .. . .........+.+++|+|++++.
T Consensus 163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~-~---~~~~~~~~~~~~~~dva~~~~~ 235 (266)
T 1xq1_A 163 IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KK-V---VISRKPLGRFGEPEEVSSLVAF 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHH---HH-H---HHhcCCCCCCcCHHHHHHHHHH
Confidence 566699998887764 48999999999998765432211000 00 0 0001111247899999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+++.|
T Consensus 236 l~~~~~~~~~G~~~~v~g 253 (266)
T 1xq1_A 236 LCMPAASYITGQTICVDG 253 (266)
T ss_dssp HTSGGGTTCCSCEEECCC
T ss_pred HcCccccCccCcEEEEcC
Confidence 987542 2366777754
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=147.79 Aligned_cols=202 Identities=14% Similarity=0.122 Sum_probs=137.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+..... ..+++++.+|++|++++.++++ ++|+|
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAKE-CPGIEPVCVDLGDWDATEKALGGIGPVDLL 80 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHh-ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence 5799999999999999999999999999999998 5444322211 2468889999999999999987 48999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
||+++..... +.|+.++.++++++... +...++|+ |+...... ..+...|..+|..
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~~Y~~sK~a 155 (244)
T 1cyd_A 81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----FPNLITYSSTKGA 155 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHHHHHHHHH
T ss_pred EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----CCCcchhHHHHHH
Confidence 9999964321 15777777777777654 31356775 55332211 1122345559999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-- 211 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-- 211 (312)
++.+++. .++++++++|+.+.++.......... .......+.....+++++|+|++++.++.++.
T Consensus 156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 229 (244)
T 1cyd_A 156 MTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE------FARKLKERHPLRKFAEVEDVVNSILFLLSDRSAS 229 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHH------HHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHH------HHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhc
Confidence 9888764 47889999999988764321100000 00000011123578999999999999997653
Q ss_pred cCCceEEecC
Q 021470 212 TLNRTMYLRP 221 (312)
Q Consensus 212 ~~~~~~~~~~ 221 (312)
..|+.+++.|
T Consensus 230 ~~G~~~~v~g 239 (244)
T 1cyd_A 230 TSGGGILVDA 239 (244)
T ss_dssp CCSSEEEEST
T ss_pred ccCCEEEECC
Confidence 2366777753
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-19 Score=145.97 Aligned_cols=193 Identities=11% Similarity=0.072 Sum_probs=136.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ...++.++++|++|++++.++++ +
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 96 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISKPETADRIVREGIERFGR 96 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC-----------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence 47899999999999999999999999999999985432 23478899999999999888876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+|+..... +.|+.++.++++++ ++.+ ..++|+ |+...... .+..+...|..
T Consensus 97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~---~~~~~~~~Y~~ 172 (260)
T 3un1_A 97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQP---MVGMPSALASL 172 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSC---BTTCCCHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccC---CCCCccHHHHH
Confidence 99999999865421 16777888888877 4555 577775 44322211 11223334555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+.......... ...........+.+++|+|++++.+...
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~-----------~~~~~~~p~~r~~~~~dva~av~~L~~~ 241 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH-----------STLAGLHPVGRMGEIRDVVDAVLYLEHA 241 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH-----------HHHHTTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH-----------HHHhccCCCCCCcCHHHHHHHHHHhccc
Confidence 99998887763 37889999999987664321100 0011112234577899999999998555
Q ss_pred CccCCceEEecC
Q 021470 210 PRTLNRTMYLRP 221 (312)
Q Consensus 210 ~~~~~~~~~~~~ 221 (312)
....|+.+++.|
T Consensus 242 ~~itG~~i~vdG 253 (260)
T 3un1_A 242 GFITGEILHVDG 253 (260)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCCCcEEEECC
Confidence 544577888864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=148.14 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=128.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
|+++||||+|+||+++++.|+++ +|++++|+ +++.+... .+. . +++++|++|++++.++++ ++|+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~-----~~~~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRR-----AGALAELAREVG--A-RALPADLADELEAKALLEEAGPLDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSC-----HHHHHHHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECC-----HHHHHHHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence 58999999999999999999998 99999997 55543322 222 2 889999999999999988 89999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~ 144 (312)
||+++..... ..|+.++.++++++++.+ ..++|+ |+.... .+..+...|..+|..++.+
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~-----~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRY-----VQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHH-----HSSTTBHHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhc-----cCCCCcchHHHHHHHHHHH
Confidence 9999865321 267888899999997666 778886 543221 1122234455599998888
Q ss_pred HHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 145 IED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 145 ~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
++. .+++++++|||.+.+..... .+.....+++++|+|++++.++.++.
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~------------------~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWAP------------------LGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGGG------------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCccc------------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 764 48999999999987664221 01122578999999999999998765
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-19 Score=146.66 Aligned_cols=208 Identities=11% Similarity=0.022 Sum_probs=133.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc---------CCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE---------QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~---------~~~~~v~~D~~d~~~l~~~ 72 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+.. .++.++++|++|++++.++
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLD-----RAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence 4789999999999999999999999999999998 4444321 22221 4688999999999998888
Q ss_pred hcc-------C-CEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCccccc
Q 021470 73 VKL-------V-DVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 73 ~~~-------~-d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~ 125 (312)
++. + |+|||+++..... ..|+.++.++++++... +...++|+ |+.....
T Consensus 82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---- 157 (264)
T 2pd6_A 82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV---- 157 (264)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----
T ss_pred HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc----
Confidence 764 3 9999999865421 16777888888887654 21246775 5432111
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
+..+...|..+|..++.+.+. .+++++++|||.+.++......... ... .........+.+++|
T Consensus 158 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~d 228 (264)
T 2pd6_A 158 -GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV---VDK-----ITEMIPMGHLGDPED 228 (264)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------C-----TGGGCTTCSCBCHHH
T ss_pred -CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHH---HHH-----HHHhCCCCCCCCHHH
Confidence 112223455599988777653 5889999999998876543211100 000 000111134678999
Q ss_pred HHHHHHHHhcCCc--cCCceEEecCCCCcCCHH
Q 021470 199 IAMYTMKAINDPR--TLNRTMYLRPPKNILSQR 229 (312)
Q Consensus 199 ~a~~~~~~l~~~~--~~~~~~~~~~~~~~~s~~ 229 (312)
+|++++.++..+. ..|+.+++.| +..++..
T Consensus 229 va~~~~~l~~~~~~~~~G~~~~v~g-g~~~~~~ 260 (264)
T 2pd6_A 229 VADVVAFLASEDSGYITGTSVEVTG-GLFMAEN 260 (264)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST-TC-----
T ss_pred HHHHHHHHcCCcccCCCCCEEEECC-Cceeccc
Confidence 9999999987643 3467777764 3355443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-19 Score=144.07 Aligned_cols=201 Identities=13% Similarity=0.141 Sum_probs=135.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v~ 80 (312)
++|+||||+|+||+++++.|+++|++|++++|+ +++.+.+... ..+++++++|++|++++.++++ ++|+||
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 81 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVRE-CPGIEPVCVDLGDWEATERALGSVGPVDLLV 81 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-STTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH-cCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence 689999999999999999999999999999998 5544322111 1367889999999999999986 589999
Q ss_pred EcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 81 CAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 81 ~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
|+++..... +.|+..+.++++++... +...++|+ |+..... +..+...|..+|..+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~~~~Y~~sK~a~ 156 (244)
T 3d3w_A 82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----AVTNHSVYCSTKGAL 156 (244)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----CCTTBHHHHHHHHHH
T ss_pred ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----CCCCCchHHHHHHHH
Confidence 999865321 15677777777776653 31356775 5433211 112223455599999
Q ss_pred HHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--c
Q 021470 142 RKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--T 212 (312)
Q Consensus 142 e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~ 212 (312)
+.+.+. .++++++++||.+.+......... ......+........+++++|+|++++.++.++. .
T Consensus 157 ~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~ 230 (244)
T 3d3w_A 157 DMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD------PHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMT 230 (244)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS------TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC------hHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCC
Confidence 888763 478899999999877543311100 0000001111122468899999999999997653 2
Q ss_pred CCceEEecC
Q 021470 213 LNRTMYLRP 221 (312)
Q Consensus 213 ~~~~~~~~~ 221 (312)
.|+.+++.|
T Consensus 231 ~G~~~~v~g 239 (244)
T 3d3w_A 231 TGSTLPVEG 239 (244)
T ss_dssp CSCEEEEST
T ss_pred CCCEEEECC
Confidence 466777753
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=148.71 Aligned_cols=200 Identities=9% Similarity=0.025 Sum_probs=134.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ...++.++.+|+.|++++.++++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS-----GERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 222 13568899999999999988886
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+.++.++ ++.+++.+ ..++|+ |+..... +..+..
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~ 155 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT-----GNVGQV 155 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH-----CCTTCH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC-----CCCCCc
Confidence 799999999865421 1566666444 44455566 778886 5532111 111223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++++++||.+.++....+... . ............+++++|+|++++.
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~dva~~~~~ 227 (248)
T 2pnf_A 156 NYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEE-I-------KQKYKEQIPLGRFGSPEEVANVVLF 227 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-H-------HHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHH-H-------HHHHHhcCCCCCccCHHHHHHHHHH
Confidence 455599998877653 478899999999887654321100 0 0000001112357899999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+++.|
T Consensus 228 l~~~~~~~~~G~~~~v~g 245 (248)
T 2pnf_A 228 LCSELASYITGEVIHVNG 245 (248)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhhcCCCcEEEeCC
Confidence 997642 2367787753
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-20 Score=152.78 Aligned_cols=224 Identities=11% Similarity=0.121 Sum_probs=151.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhccC-----CCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKEQ-----GAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~-----~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+... .+.++++|++|++++.++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN-----PDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544322 2233221 57889999999998888776
Q ss_pred -----cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhC---CCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAG---NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~---~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.++.++++++...- .-.++|+ ||..... +..+
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~ 160 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-----THRW 160 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----CCTT
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-----CCCC
Confidence 57999999996221 0 167788888888776542 0236775 5422111 1122
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+............ .....+........+.+++|+|+++
T Consensus 161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~p~~r~~~~~dva~~~ 234 (281)
T 3svt_A 161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA------ELSSDYAMCTPLPRQGEVEDVANMA 234 (281)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH------HHHHHHHHHCSSSSCBCHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH------HHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 34555599999888763 4688999999998766543211100 0000000011123466899999999
Q ss_pred HHHhcCCcc--CCceEEecCCCCcCC-HHHHHHHHHHHhCCcc
Q 021470 204 MKAINDPRT--LNRTMYLRPPKNILS-QREVVETWEKLIGKTL 243 (312)
Q Consensus 204 ~~~l~~~~~--~~~~~~~~~~~~~~s-~~e~~~~~~~~~g~~~ 243 (312)
+.++..... .|+.+++.|.. .++ ..|+++.+.+.+|.+.
T Consensus 235 ~~l~s~~~~~itG~~~~vdgG~-~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 235 MFLLSDAASFVTGQVINVDGGQ-MLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG-GGSCCCCCHHHHHHHHCTTG
T ss_pred HHHhCcccCCCCCCEEEeCCCh-hcccCCcchhccccccCCcc
Confidence 999976532 47788886544 555 7889999999999764
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.4e-19 Score=146.01 Aligned_cols=202 Identities=14% Similarity=0.112 Sum_probs=136.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLD-----EAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 44432 112222 3468899999999999988876
Q ss_pred --cCCEEEEcCCCCc-cc--------------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVH-IR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~-~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++... .. ..|+.++.++++++.. .+ ..++|+ |+ .+.... +..|.
T Consensus 88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~----~~~~~ 162 (260)
T 3awd_A 88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVN----RPQQQ 162 (260)
T ss_dssp HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----SSSCC
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccC----CCCCc
Confidence 6899999998643 10 1567777777777654 45 567775 44 332111 11222
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccc-cCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLG-GLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..|..+|..++.+++. .+++++++|||.+.++... ....... ...+........+++++|+|+++
T Consensus 163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~dva~~~ 235 (260)
T 3awd_A 163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPEL-------YDAWIAGTPMGRVGQPDEVASVV 235 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHH-------HHHHHHTCTTSSCBCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHH-------HHHHHhcCCcCCCCCHHHHHHHH
Confidence 3455599998887764 5889999999998876543 1110000 00000011123578999999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+++.|
T Consensus 236 ~~l~~~~~~~~~G~~~~v~g 255 (260)
T 3awd_A 236 QFLASDAASLMTGAIVNVDA 255 (260)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhccCCCcEEEECC
Confidence 99997642 2466777764
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=147.46 Aligned_cols=203 Identities=9% Similarity=0.074 Sum_probs=133.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCC-eEEEccCCCHHHHHHHh------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGA-KLVSGSFNDYQSLVNAV------K 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~-~~v~~D~~d~~~l~~~~------~ 74 (312)
.++++||||+|+||++++++|+++|++|++++|+ +++.+.. +.+ ..++ .++++|++|++++.+++ .
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDRE-----AAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 4689999999999999999999999999999998 5444322 223 2345 88999999999988876 3
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|+|||+++..... +.|+.++.++++ .+++.+ ..++|+ |+....... +..|...|.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y~ 160 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVN---RPQFASSYM 160 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---SSSCBHHHH
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCC---CCCcchHHH
Confidence 789999999865421 156666544444 445566 678876 543322111 112223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .+++++++|||.+.++......... .....+........+++++|+|++++.++.
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 234 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERP------ELFETWLDMTPMGRCGEPSEIAAAALFLAS 234 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCH------HHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccCh------HHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 599998887753 3789999999999876543211000 000000000112357899999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
.+. ..|+.+++.|
T Consensus 235 ~~~~~~~G~~~~v~g 249 (254)
T 2wsb_A 235 PAASYVTGAILAVDG 249 (254)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred cccccccCCEEEECC
Confidence 642 2466777753
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-19 Score=142.67 Aligned_cols=172 Identities=17% Similarity=0.116 Sum_probs=126.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc---CCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL---VDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~---~d~v 79 (312)
+|+|+||||+|+||+++++.|+ +|++|++++|+.. .+.+|+.|++++.+++++ +|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999999 9999999999721 468999999999998875 8999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
||+++..... +.|+.++.++++++... + .++|+ |+..... +..+...|..+|..+
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~-----~~~~~~~Y~~sK~~~ 135 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMED-----PIVQGASAAMANGAV 135 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTS-----CCTTCHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcC-----CCCccHHHHHHHHHH
Confidence 9999864321 25778888999998876 3 46665 5432211 112233455599999
Q ss_pred HHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCc
Q 021470 142 RKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNR 215 (312)
Q Consensus 142 e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~ 215 (312)
|.+.+. .+++++++||+.+.+..... ++......+++++|+|++++.++... ..|+
T Consensus 136 ~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~-----------------~~~~~~~~~~~~~dva~~~~~~~~~~-~~G~ 197 (202)
T 3d7l_A 136 TAFAKSAAIEMPRGIRINTVSPNVLEESWDKL-----------------EPFFEGFLPVPAAKVARAFEKSVFGA-QTGE 197 (202)
T ss_dssp HHHHHHHTTSCSTTCEEEEEEECCBGGGHHHH-----------------GGGSTTCCCBCHHHHHHHHHHHHHSC-CCSC
T ss_pred HHHHHHHHHHccCCeEEEEEecCccCCchhhh-----------------hhhccccCCCCHHHHHHHHHHhhhcc-ccCc
Confidence 988875 37889999999988764321 01112346889999999999888543 3456
Q ss_pred eEEe
Q 021470 216 TMYL 219 (312)
Q Consensus 216 ~~~~ 219 (312)
.|++
T Consensus 198 ~~~v 201 (202)
T 3d7l_A 198 SYQV 201 (202)
T ss_dssp EEEE
T ss_pred eEec
Confidence 6665
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-18 Score=145.36 Aligned_cols=210 Identities=8% Similarity=0.069 Sum_probs=135.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
+.++++||||+|+||+++++.|+++|++|++++|+. +++.+. .+.+ ....+.++++|++|++++.++++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGA----PDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCC----HHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999853 333221 1222 24578899999999999888876
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.++.++++++ ++.+ ..++|+ |+...... ....
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~ 173 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVA-----SPFK 173 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTC
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccC-----CCCc
Confidence 789999999975421 16777777777776 4455 567775 44322111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC----CCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL----PSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
..|..+|..++.+.+. .|+++..++||.+............... ........+..+.....+.+++|+|
T Consensus 174 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA 253 (281)
T 3v2h_A 174 SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVA 253 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHH
Confidence 3455599998877653 4788999999998776543221110000 0000011123334445789999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++..+. ..|+.+++.|
T Consensus 254 ~~v~~L~s~~a~~itG~~i~vdG 276 (281)
T 3v2h_A 254 SLALYLAGDDAAQITGTHVSMDG 276 (281)
T ss_dssp HHHHHHHSSGGGGCCSCEEEEST
T ss_pred HHHHHHcCCCcCCCCCcEEEECC
Confidence 99999998753 2467777754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=145.41 Aligned_cols=203 Identities=11% Similarity=0.073 Sum_probs=134.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-CCCeEEEccCCCHHHHHHHhc----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+.. .+++++++|++|++++.++++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHH
Confidence 346799999999999999999999999999999998 4444321 22221 478899999999999888876
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHH----HHHHHHHHhCCC-ceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQL----KLVDAIKEAGNV-KRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~----~l~~aa~~~~~v-~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++..... ..|+.++. .+++.+++.+ . .++|+ |+...... ..+.
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~-----~~~~ 152 (251)
T 1zk4_A 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVG-----DPSL 152 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSC-----CTTC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccC-----CCCC
Confidence 489999999865321 14555444 4455555556 5 67776 54332211 1122
Q ss_pred CchhhhHHHHHHHHH---------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIE---------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~---------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
..|..+|..++.+.+ ..++++++++||.+.++............. .........+++++|+|++
T Consensus 153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~dva~~ 225 (251)
T 1zk4_A 153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS-------QRTKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHT-------STTTCTTSSCBCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHH-------HhhcCCCCCCcCHHHHHHH
Confidence 345559999887765 246889999999988765433211000000 0011112357899999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++.++. ..|+.+++.|
T Consensus 226 ~~~l~~~~~~~~~G~~~~v~g 246 (251)
T 1zk4_A 226 CVYLASNESKFATGSEFVVDG 246 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHcCcccccccCcEEEECC
Confidence 999997653 2467777764
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=147.88 Aligned_cols=223 Identities=15% Similarity=0.123 Sum_probs=139.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh---ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF---KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l---~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++.+|+..+.+.++.+.+... ...++.++++|++|++++.++++
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998555445544333221 13578999999999999988886
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCC-
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGR- 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~- 132 (312)
++|++||+++..... ++|+.++.++++++ ++.+ ..++|. ||.+..... .|..
T Consensus 85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~-----~~~~~ 158 (324)
T 3u9l_A 85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT-----PPYLA 158 (324)
T ss_dssp HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----CSSCH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC-----CCcch
Confidence 799999999965321 26888888888888 5666 677775 543322111 1223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccccccc--ccCCCCCccCCCC--CeeEEeCCCC---c-----ceee
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFL--GGLCQPGSILPSK--DSVVLLGDGN---P-----KAIY 193 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~---~-----~~~~ 193 (312)
.|..+|..++.+.+. .|+++++++||.+..... ............. ......+..+ . ..+.
T Consensus 159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 238 (324)
T 3u9l_A 159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPD 238 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTT
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCC
Confidence 455599998877653 478999999998853311 1000000000000 0000000000 0 0012
Q ss_pred eeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHH
Q 021470 194 VDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVV 232 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~ 232 (312)
.+++|+|++++.++..+........+.|+. ..+...+.
T Consensus 239 ~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~-~~~~~~~~ 276 (324)
T 3u9l_A 239 ADVSLVADAIVRVVGTASGKRPFRVHVDPA-EDGADVGF 276 (324)
T ss_dssp CCTHHHHHHHHHHHTSCTTCCCSEEEECTT-CCSHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCCCeEEEeCCc-chHHHHHH
Confidence 578999999999998874322333444554 45644443
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=148.39 Aligned_cols=208 Identities=11% Similarity=0.009 Sum_probs=139.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||++++++|+++|++|++++|+. +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999932 333321 12232 3467889999999999988886
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCC-cccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTD-PAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~-~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+.++.++++++... + .++|+ |+.... .. ..+...
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~-----~~~~~~ 169 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTG-----IPNHAL 169 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCS-----CCSCHH
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CEEEEEcChHhccCC-----CCCCch
Confidence 789999999865321 26788888999988876 3 46665 543322 11 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCC-CCcc---CCC-CCeeEEeCCCCcceeeeeHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ-PGSI---LPS-KDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
|..+|..++.+.+. .++++++++||.+.++....... .... ... ......+..+.....+++++|+|+
T Consensus 170 Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 249 (274)
T 1ja9_A 170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR 249 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence 55599999888764 38999999999987764331100 0000 000 000001111223346889999999
Q ss_pred HHHHHhcCCcc--CCceEEecC
Q 021470 202 YTMKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~~--~~~~~~~~~ 221 (312)
+++.++.++.. .|+.+++.|
T Consensus 250 ~i~~l~~~~~~~~~G~~~~v~g 271 (274)
T 1ja9_A 250 AVSALCQEESEWINGQVIKLTG 271 (274)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCcccccccCcEEEecC
Confidence 99999976532 467888853
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-18 Score=142.36 Aligned_cols=209 Identities=8% Similarity=0.066 Sum_probs=136.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ-----VDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444321 2222 3468899999999999888876
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.+..++++++. +.+ ..++|+ |+...... ..+..
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 155 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQP-----LWYEP 155 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTCH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCC-----CCCcc
Confidence 799999999865321 146666666666654 456 678776 54332211 11223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCC--CCe-eEEeCCC-CcceeeeeHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPS--KDS-VVLLGDG-NPKAIYVDEDDIAM 201 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~v~~~D~a~ 201 (312)
.|..+|..++.+.+. .++++++++||.+.++.............. ... ...+... .....+.+++|+|+
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 235 (263)
T 3ai3_A 156 IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELAN 235 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 455599998877653 578999999999887643221000000000 000 0000000 11235789999999
Q ss_pred HHHHHhcCCc--cCCceEEecCC
Q 021470 202 YTMKAINDPR--TLNRTMYLRPP 222 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~~ 222 (312)
+++.++..+. ..|+.+++.|.
T Consensus 236 ~~~~l~s~~~~~~~G~~~~vdgG 258 (263)
T 3ai3_A 236 FFVFLCSERATYSVGSAYFVDGG 258 (263)
T ss_dssp HHHHHTSTTCTTCCSCEEEESTT
T ss_pred HHHHHcCccccCCCCcEEEECCC
Confidence 9999997653 23677888643
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.1e-19 Score=144.80 Aligned_cols=201 Identities=13% Similarity=0.064 Sum_probs=134.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh-c--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF-K--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l-~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ . ..++.++++|++|++++.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS-----AETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATME 76 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 4444322 222 1 3468899999999999988876
Q ss_pred ---cCCEEEEcCCCCccc-----------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCC
Q 021470 75 ---LVDVVICAISGVHIR-----------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~-----------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|+|||+++..... ..|+.++.++ +..+++.+ ..++|+ |+...... ..
T Consensus 77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~ 150 (250)
T 2cfc_A 77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVA-----FP 150 (250)
T ss_dssp HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CT
T ss_pred HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccC-----CC
Confidence 799999999864311 1455555444 44445556 678876 54332211 12
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEeccccccccccc-CCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGG-LCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+...|..+|..++.+.+. .+++++++|||.+.++.... ....... .. .........+.+.+|+|+
T Consensus 151 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~dva~ 223 (250)
T 2cfc_A 151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELR----DQ---VLARIPQKEIGTAAQVAD 223 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHH----HH---HHTTCTTCSCBCHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHH----HH---HHhcCCCCCCcCHHHHHH
Confidence 223455599998887764 38899999999988765432 1100000 00 000111235779999999
Q ss_pred HHHHHhcCCcc--CCceEEecC
Q 021470 202 YTMKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~~--~~~~~~~~~ 221 (312)
+++.++..+.. .|+.+++.|
T Consensus 224 ~~~~l~~~~~~~~~G~~~~v~g 245 (250)
T 2cfc_A 224 AVMFLAGEDATYVNGAALVMDG 245 (250)
T ss_dssp HHHHHHSTTCTTCCSCEEEEST
T ss_pred HHHHHcCchhhcccCCEEEECC
Confidence 99999987532 367777754
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-18 Score=140.38 Aligned_cols=199 Identities=10% Similarity=0.021 Sum_probs=127.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+... ...++..+.+|++|++++.++++ +
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------------EQYPFATEVMDVADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------------SCCSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------------hcCCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998431 12248899999999999988876 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.++.++++++ ++.+ ..++|+ |+..... +..+...|..
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~~ 148 (250)
T 2fwm_X 75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHT-----PRIGMSAYGA 148 (250)
T ss_dssp CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-----CCTTCHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC-----CCCCCchHHH
Confidence 89999999864321 15677777777777 4555 577775 5433221 1122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEE----eCCCCcceeeeeHHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL----LGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..++.+.+. .++++++++||.+..++........ ......+.- +........+.+++|+|++++.
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 226 (250)
T 2fwm_X 149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF 226 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHH
Confidence 99998887764 4899999999998876543211000 000000000 0001111246789999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+.+.|
T Consensus 227 l~s~~~~~~tG~~i~vdG 244 (250)
T 2fwm_X 227 LASDLASHITLQDIVVDG 244 (250)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCccccCCCCCEEEECC
Confidence 997653 3467777764
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-18 Score=142.30 Aligned_cols=211 Identities=13% Similarity=0.037 Sum_probs=130.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||++++++|+++|++|++++|+ .++.+.+.......+.++++|++|.+++.++++ +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD-----KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999998 555543333225678999999999998888776 6
Q ss_pred CCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhC-------CCceeec-CCCCCCcccccccCCCCC
Q 021470 76 VDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAG-------NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 76 ~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~-------~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
+|++||+++.... . +.|+.+..++++++...- ...++|+ |+...... .....
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~ 158 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----RPNLA 158 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----CTTCH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----CCCcc
Confidence 8999999996541 1 156667666666665431 0124554 54332211 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+.......+.... .......+........+++++|+|+++..
T Consensus 159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 234 (261)
T 3n74_A 159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED----SEEIRKKFRDSIPMGRLLKPDDLAEAAAF 234 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC----cHHHHHHHhhcCCcCCCcCHHHHHHHHHH
Confidence 355599998877653 4788899999988766544322110 01111111222233467899999999999
Q ss_pred HhcCCc--cCCceEEecCCCCcCCH
Q 021470 206 AINDPR--TLNRTMYLRPPKNILSQ 228 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~~~~~~s~ 228 (312)
++.... ..|+.+++.| +..++.
T Consensus 235 l~s~~~~~itG~~i~vdg-G~~~~~ 258 (261)
T 3n74_A 235 LCSPQASMITGVALDVDG-GRSIGG 258 (261)
T ss_dssp HTSGGGTTCCSCEEEEST-TTTC--
T ss_pred HcCCcccCcCCcEEEecC-CcccCC
Confidence 997543 2467778864 335543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-18 Score=140.56 Aligned_cols=201 Identities=14% Similarity=0.043 Sum_probs=136.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ..++.++++|++|++++.++++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999998 5544322 222 3467889999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+.. .++..+++.+ ..++|+ |+...... ..+...
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~ 150 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG-----LALTSS 150 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTCHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC-----CCCchh
Confidence 799999999865321 14555544 5666666676 678876 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeee-eHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYV-DEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~D~a~~~~~ 205 (312)
|..+|..++.+.+. .++++++++||.+..+......... .. .. ........+. +++|+|++++.
T Consensus 151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~--~~---~~~~p~~~~~~~~~dvA~~v~~ 222 (254)
T 1hdc_A 151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ---GE--GN---YPNTPMGRVGNEPGEIAGAVVK 222 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC---ST--TS---CTTSTTSSCB-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhH---HH--HH---HhcCCCCCCCCCHHHHHHHHHH
Confidence 55599998877653 4788999999998876533211100 00 00 0001112356 89999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+.+.|
T Consensus 223 l~s~~~~~~tG~~~~vdg 240 (254)
T 1hdc_A 223 LLSDTSSYVTGAELAVDG 240 (254)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCCCCCEEEECC
Confidence 997653 2467777764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-19 Score=144.78 Aligned_cols=202 Identities=11% Similarity=0.084 Sum_probs=128.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|+++++..... .+ ...+.+. ..++.++++|++|++++.++++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~-~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS-LD--ATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH-HH--HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH-HH--HHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999994432211 11 1112222 3468899999999999988876
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+|||+++..... ..|+.++.++++++. +.+ ..++|+ |+....... .+...|
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----~~~~~Y 155 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGN-----AGQANY 155 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------CHHH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----CCCcHh
Confidence 789999999865311 156777666666655 356 678876 553222111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++++++||.+..+........ ....+........+++++|+|++++.++
T Consensus 156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~ 227 (247)
T 2hq1_A 156 AASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDK--------VKEMYLNNIPLKRFGTPEEVANVVGFLA 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchH--------HHHHHHhhCCCCCCCCHHHHHHHHHHHc
Confidence 5599998887764 378899999998876543321100 0000111112235789999999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
..+. ..|+.+++.|
T Consensus 228 ~~~~~~~~G~~~~v~g 243 (247)
T 2hq1_A 228 SDDSNYITGQVINIDG 243 (247)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CcccccccCcEEEeCC
Confidence 7643 2467888854
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=145.90 Aligned_cols=201 Identities=13% Similarity=0.074 Sum_probs=137.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+. .++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS----KEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999988863 233321 12222 3467889999999999888876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.++.++++++ ++.+ ..++|+ ||..... +..+...
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 153 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAV-----GNPGQAN 153 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-----CCTTCHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC-----CCCCChH
Confidence 789999999975421 26788888888887 5556 567775 5422111 1122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... .............+.+.+|+|++++.+
T Consensus 154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~~~dva~~v~~l 225 (246)
T 3osu_A 154 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE--------LKEQMLTQIPLARFGQDTDIANTVAFL 225 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599988877653 578899999999876643322110 000011112233567899999999999
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..+.. .|+.+++.|
T Consensus 226 ~s~~~~~itG~~i~vdg 242 (246)
T 3osu_A 226 ASDKAKYITGQTIHVNG 242 (246)
T ss_dssp TSGGGTTCCSCEEEEST
T ss_pred hCccccCCCCCEEEeCC
Confidence 876533 367778754
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=143.48 Aligned_cols=203 Identities=11% Similarity=0.028 Sum_probs=134.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.. +....+.+. . .++++|++|++++.++++ +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-----GKEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT-----HHHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 478999999999999999999999999999999842 222223332 4 889999999988888765 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.++.++++++.. .+ ..++|+ ||...... ..+...|..
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~ 151 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA-----EQENAAYNA 151 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB-----CTTBHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCC-----CCCChhHHH
Confidence 89999999865321 1577777777777654 45 577776 55332211 112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++..++||.+...+......... ........+........+++++|+|++++.++..
T Consensus 152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~ 229 (256)
T 2d1y_A 152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP--DPERTRRDWEDLHALRRLGKPEEVAEAVLFLASE 229 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhcccccc--CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877763 47889999999987654332100000 0000000011122234578999999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
+. ..|+.+++.|
T Consensus 230 ~~~~~~G~~~~v~g 243 (256)
T 2d1y_A 230 KASFITGAILPVDG 243 (256)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCCCCEEEECC
Confidence 53 2466778864
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-18 Score=143.58 Aligned_cols=204 Identities=15% Similarity=0.098 Sum_probs=136.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++++||||+|+||++++++|+++|++|++++|+ .++.+.....-..+++++++|++|.+++.++++ ++|++
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRD-----TRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999999999998 555543322224578999999999999999987 57999
Q ss_pred EEcCCCCccc------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccc--------cccCCCCCchhhhH
Q 021470 80 ICAISGVHIR------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKM--------ANAMEPGRVTFDDK 138 (312)
Q Consensus 80 ~~~~~~~~~~------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~--------~~~~~p~~~~~~~K 138 (312)
||+|+..... ..|+.++.++++++.... .+++|+ |+........ ..+..+...|..+|
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK 169 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSK 169 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHH
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccCCCCcchHHHHH
Confidence 9999965321 278889999999999887 778876 4422211100 01122223455599
Q ss_pred HHHHHHHHH-------hC--CCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 139 MVVRKAIED-------AG--IPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 139 ~~~e~~~~~-------~~--~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
..++.+.+. .+ +.+..++||.+..++....... .. .. .......+-..+.+|+|+.++.++..
T Consensus 170 ~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~----~~-~~---~~~~~~~~~~~~~~~~A~~~~~l~~~ 241 (291)
T 3rd5_A 170 LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK----LG-DA---LMSAATRVVATDADFGARQTLYAASQ 241 (291)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------------CHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH----HH-HH---HHHHHHHHHhCCHHHHHHHHHHHHcC
Confidence 998777653 35 7888899999876554332111 00 00 00001112334699999999999988
Q ss_pred CccCCceEEec
Q 021470 210 PRTLNRTMYLR 220 (312)
Q Consensus 210 ~~~~~~~~~~~ 220 (312)
+...|+.+.+.
T Consensus 242 ~~~~G~~~~vd 252 (291)
T 3rd5_A 242 DLPGDSFVGPR 252 (291)
T ss_dssp CCCTTCEEEET
T ss_pred CCCCCceeCCc
Confidence 64445655554
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-18 Score=143.17 Aligned_cols=206 Identities=11% Similarity=0.044 Sum_probs=136.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ..++.++++|++|++++.++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLD-----VMAAQAVVAGL-ENGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-TTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999998 5554322 223 2378899999999999988876
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++... +...++|+ |+...... ..+...|.
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~ 160 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-----APLLAHYS 160 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----CTTCHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-----CCCchhHH
Confidence 799999999865321 15666777777776643 21356665 54332211 11223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCC-----CCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLC-----QPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
.+|..++.+.+. .++++++++||.+..+...... .... ........+........+++++|+|+++
T Consensus 161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~~v 238 (263)
T 3ak4_A 161 ASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGM--TPEAVRAEYVSLTPLGRIEEPEDVADVV 238 (263)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTS--CHHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccccccccc--CcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 599998877653 4899999999998776432210 0000 0000000000111123578999999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+++.|
T Consensus 239 ~~l~s~~~~~~tG~~~~vdg 258 (263)
T 3ak4_A 239 VFLASDAARFMTGQGINVTG 258 (263)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHhCccccCCCCCEEEECc
Confidence 99997653 2467778864
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-18 Score=140.81 Aligned_cols=208 Identities=10% Similarity=0.063 Sum_probs=132.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRN-----REKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444321 2222 2278899999999999998886
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.+. +.++..+++.+ ..++|+ |+...... ..+..
T Consensus 82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 155 (260)
T 2z1n_A 82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRP-----WQDLA 155 (260)
T ss_dssp HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTBH
T ss_pred HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCC-----CCCCc
Confidence 699999999964321 1455555 44455555666 678876 54332211 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc--CCCCCe-eEEeCCCCcceeeeeHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI--LPSKDS-VVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
.|..+|..++.+.+. .++++++++||.+..+........... ...... ...+........+.+++|+|++
T Consensus 156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 235 (260)
T 2z1n_A 156 LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASV 235 (260)
T ss_dssp HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHH
Confidence 455599988777653 478999999999887654311000000 000000 0001111112346799999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++..+. ..|+.+.+.|
T Consensus 236 v~~l~s~~~~~~tG~~i~vdG 256 (260)
T 2z1n_A 236 VAFLASEKASFITGAVIPVDG 256 (260)
T ss_dssp HHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHhCccccCCCCCEEEeCC
Confidence 999987642 2466777754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=143.79 Aligned_cols=200 Identities=14% Similarity=0.112 Sum_probs=135.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... + ...+.+ ..++.++++|++|++++.++++ +
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~--~--~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG--E--AQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH--H--HHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH--H--HHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 47899999999999999999999999999999985432 1 111223 4578999999999999988887 7
Q ss_pred CCEEEEcCCCCccc--------------------cchhHhHHHHHHHHHHh----------CCCceeec-CCCCCCcccc
Q 021470 76 VDVVICAISGVHIR--------------------SHQILLQLKLVDAIKEA----------GNVKRFLP-SEFGTDPAKM 124 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------------~~~~~~~~~l~~aa~~~----------~~v~~~v~-S~~g~~~~~~ 124 (312)
+|+|||+++..... ..|+....++++++... + ..++|+ |+.....
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--- 162 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFE--- 162 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHH---
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcC---
Confidence 99999999864210 15777788888888765 4 567775 5432211
Q ss_pred cccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeH
Q 021470 125 ANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDE 196 (312)
Q Consensus 125 ~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~ 196 (312)
+..+...|..+|..++.+.+. .++++++++||.+..+........ .... ....... ..+.++
T Consensus 163 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~ 232 (265)
T 2o23_A 163 --GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-----VCNF---LASQVPFPSRLGDP 232 (265)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH---HHHTCSSSCSCBCH
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH-----HHHH---HHHcCCCcCCCCCH
Confidence 112223455599988777653 478899999998876543321110 0000 0000001 246799
Q ss_pred HHHHHHHHHHhcCCccCCceEEecC
Q 021470 197 DDIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
+|+|++++.++..+...|+.+.+.|
T Consensus 233 ~dva~~~~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 233 AEYAHLVQAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHHHhhcCccCceEEEECC
Confidence 9999999999987655677888864
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-18 Score=141.21 Aligned_cols=201 Identities=10% Similarity=0.052 Sum_probs=131.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+..... + ..+.+ ..++.++++|++|++++.++++ +
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~---~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE-E---PAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-H---HHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999999999999854321 1 11222 4578999999999999888876 7
Q ss_pred CCEEEEcCCCCccc------------------cchhHhHHHHHHHHHHh----------CCCceeec-CCCCCCcccccc
Q 021470 76 VDVVICAISGVHIR------------------SHQILLQLKLVDAIKEA----------GNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 76 ~d~v~~~~~~~~~~------------------~~~~~~~~~l~~aa~~~----------~~v~~~v~-S~~g~~~~~~~~ 126 (312)
+|++||+++..... +.|+.++.++++++... + ..++|+ |+.....
T Consensus 82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~-~g~iv~isS~~~~~----- 155 (257)
T 3tpc_A 82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE-RGVIVNTASIAAFD----- 155 (257)
T ss_dssp CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHH-----
T ss_pred CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC-CeEEEEEechhhcc-----
Confidence 99999999965310 26777888888888764 2 345665 5432211
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDEDD 198 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D 198 (312)
+..+...|..+|..++.+.+. .|+++..++||.+............ .......... ..+.+++|
T Consensus 156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~~r~~~~~d 227 (257)
T 3tpc_A 156 GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV--------QDALAASVPFPPRLGRAEE 227 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------------CCSSSSCSCBCHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH--------HHHHHhcCCCCCCCCCHHH
Confidence 112223455599988877543 5788999999998766543221110 0001111111 35788999
Q ss_pred HHHHHHHHhcCCccCCceEEecCC
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~~ 222 (312)
+|+++..+++.....|+.+++.|.
T Consensus 228 va~~v~~l~s~~~itG~~i~vdGG 251 (257)
T 3tpc_A 228 YAALVKHICENTMLNGEVIRLDGA 251 (257)
T ss_dssp HHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHcccCCcCCcEEEECCC
Confidence 999999999875445778888643
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=146.04 Aligned_cols=205 Identities=13% Similarity=0.077 Sum_probs=136.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHh------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAV------ 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~------ 73 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.+++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 444432 22232 235788999999999888877
Q ss_pred --ccCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 74 --KLVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 74 --~~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
.++|++||+++..... +.|+.++.++++++. +.+ ..++|+ |+...... ..+..
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 157 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA-----VPYEA 157 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC-----CTTCH
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC-----CCCcc
Confidence 4699999999964321 157777778877774 455 678776 55332111 11223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .+++++.++||.+..+......... .....+..+........+.+++|+|++++.
T Consensus 158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~ 234 (260)
T 2ae2_A 158 VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP---EQKENLNKLIDRCALRRMGEPKELAAMVAF 234 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH---HHHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccCh---hhHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 455599999888764 3788999999998766433211100 000000001111122357899999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+++.|
T Consensus 235 l~s~~~~~~tG~~~~vdg 252 (260)
T 2ae2_A 235 LCFPAASYVTGQIIYVDG 252 (260)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCccccCCCCCEEEECC
Confidence 987643 2467777764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=7.4e-19 Score=145.59 Aligned_cols=210 Identities=10% Similarity=0.110 Sum_probs=137.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++|+||||+|+||+++++.|+++|++|++++|+.... .+..+.+......++.++++|++|++++.++++ +
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA-VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH-HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhh-HHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999974432 111111111114578899999999998888775 3
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccc--cccCCCCCch
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKM--ANAMEPGRVT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~--~~~~~p~~~~ 134 (312)
+|++||+++..... ..|+.++.++++++... +...++|+ |+........ ..+..+...|
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y 172 (265)
T 1h5q_A 93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFY 172 (265)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHH
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccccc
Confidence 89999999875321 25677777888877543 31367775 5432211110 1122233445
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++++++||.+..+........ . ............+++++|+|++++.++
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~dva~~~~~l~ 244 (265)
T 1h5q_A 173 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK-I-------RDHQASNIPLNRFAQPEEMTGQAILLL 244 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH-H-------HHHHHHTCTTSSCBCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh-H-------HHHHHhcCcccCCCCHHHHHHHHHhhc
Confidence 5599998887763 378999999999887654322100 0 000000111124789999999999999
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.++. ..|+.+++.|
T Consensus 245 ~~~~~~~~G~~~~v~g 260 (265)
T 1h5q_A 245 SDHATYMTGGEYFIDG 260 (265)
T ss_dssp SGGGTTCCSCEEEECT
T ss_pred cCchhcCcCcEEEecC
Confidence 7653 3467788764
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.8e-19 Score=145.06 Aligned_cols=204 Identities=17% Similarity=0.165 Sum_probs=135.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-hc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-FK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|+++.|+.. ...+.... +. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT----TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh----HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999988742 22222111 11 3468999999999999988876
Q ss_pred --cCCEEEEcCCC--Cccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISG--VHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~--~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++. .... +.|+.++.++++++ ++.+ ..++|+ |+.+.... .+..+.
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~---~~~~~~ 158 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSA---PGWIYR 158 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGC---CCCTTC
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhccc---CCCCCC
Confidence 78999999993 2110 16777788888877 5666 677775 54422111 111222
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++++..++||.+............. .. .........+.+++|+|++++
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~-------~~~~~p~~r~~~~~dva~~v~ 230 (264)
T 3i4f_A 159 SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEAR-QL-------KEHNTPIGRSGTGEDIARTIS 230 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHH-HC---------------CCCCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHH-HH-------HhhcCCCCCCcCHHHHHHHHH
Confidence 3455599998877653 57889999999988765432211000 00 001111234678999999999
Q ss_pred HHhcCCcc--CCceEEecCC
Q 021470 205 KAINDPRT--LNRTMYLRPP 222 (312)
Q Consensus 205 ~~l~~~~~--~~~~~~~~~~ 222 (312)
.++..+.. .|+.+++.|.
T Consensus 231 ~l~s~~~~~itG~~i~vdGG 250 (264)
T 3i4f_A 231 FLCEDDSDMITGTIIEVTGA 250 (264)
T ss_dssp HHHSGGGTTCCSCEEEESCS
T ss_pred HHcCcccCCCCCcEEEEcCc
Confidence 99986532 3778888643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.7e-18 Score=137.75 Aligned_cols=201 Identities=9% Similarity=0.025 Sum_probs=129.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+.. ++.+. ++.. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA----PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch----hHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999831 33321 1222 3468889999999998888754
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..+++++ +++.+ ..++|+ |+...... ..+...|.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~ 155 (249)
T 2ew8_A 82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK-----IEAYTHYI 155 (249)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC-----CSSCHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccC-----CCCchhHH
Confidence 789999999865321 1566665555555 55666 678776 54332111 11223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccc-cCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLG-GLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+|..++.+.+. .+++++.++||.+..++.. ...... ..... .+. .....+.+++|+|++++.++
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~-~~~-----~~~~~~~~p~dva~~~~~l~ 228 (249)
T 2ew8_A 156 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP-NML-----QAIPRLQVPLDLTGAAAFLA 228 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTT-----SSSCSCCCTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH-Hhh-----CccCCCCCHHHHHHHHHHHc
Confidence 599998877764 4789999999998776543 211000 00000 000 11124789999999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
..+. ..|+.+.+.|
T Consensus 229 s~~~~~~tG~~~~vdG 244 (249)
T 2ew8_A 229 SDDASFITGQTLAVDG 244 (249)
T ss_dssp SGGGTTCCSCEEEESS
T ss_pred CcccCCCCCcEEEECC
Confidence 7642 2466777754
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=143.36 Aligned_cols=208 Identities=8% Similarity=0.053 Sum_probs=135.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+.. .+.. +.+. ..++.++++|++|++++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~---~~~~---~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP---APAL---AEIARHGVKAVHHPADLSDVAQIEALFALAER 75 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC---HHHH---HHHHTTSCCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch---HHHH---HHHHhcCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999743 1111 2222 3457888999999999998887
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.+ ++.++..+++.+ ..++|+ |+...... ..+..
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 149 (255)
T 2q2v_A 76 EFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVG-----STGKA 149 (255)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC-----CTTBH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccC-----CCCch
Confidence 799999999864321 145554 444555556666 678876 54332211 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe---eEEe-CCCCcceeeeeHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS---VVLL-GDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~v~~~D~a~ 201 (312)
.|..+|..++.+.+. .++++++++||.+..++........ ....... ...+ ........+++++|+|+
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 228 (255)
T 2q2v_A 150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDR-AANGGDPLQAQHDLLAEKQPSLAFVTPEHLGE 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHH-HHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccc-cccccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence 455599998877763 3788999999998876532211000 0000000 0001 11222346889999999
Q ss_pred HHHHHhcCCcc--CCceEEecC
Q 021470 202 YTMKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~~--~~~~~~~~~ 221 (312)
+++.++..+.. .|+.+++.|
T Consensus 229 ~~~~l~s~~~~~~tG~~~~vdg 250 (255)
T 2q2v_A 229 LVLFLCSEAGSQVRGAAWNVDG 250 (255)
T ss_dssp HHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHhCCccCCCCCCEEEECC
Confidence 99999876532 367777754
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.6e-18 Score=139.46 Aligned_cols=183 Identities=12% Similarity=0.024 Sum_probs=121.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|++++|+||||+|+||+++++.|+++| ++|++++|+.. +.+.+..+...++.++.+|++|++++.++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~-----~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE-----KATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGG-----GCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHH-----HHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 777899999999999999999999999 99999999833 3222222334578999999999999988876
Q ss_pred -----cCCEEEEcCCCCc-cc--------------cchhHhHHHHHHHHHHh----------CC----Cceeec-CCCCC
Q 021470 75 -----LVDVVICAISGVH-IR--------------SHQILLQLKLVDAIKEA----------GN----VKRFLP-SEFGT 119 (312)
Q Consensus 75 -----~~d~v~~~~~~~~-~~--------------~~~~~~~~~l~~aa~~~----------~~----v~~~v~-S~~g~ 119 (312)
++|+|||+++... .. ..|+.+..++++++... +. ..++|+ |+...
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 7999999998654 11 15667777777766543 20 356665 44322
Q ss_pred Ccccc--cccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc
Q 021470 120 DPAKM--ANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK 190 (312)
Q Consensus 120 ~~~~~--~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (312)
..... ..+..+...|..+|..++.+.+. .++++..++||.+.......
T Consensus 156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------- 212 (250)
T 1yo6_A 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------- 212 (250)
T ss_dssp CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------------
Confidence 11110 11112233455599998887753 37889999999875442210
Q ss_pred eeeeeHHHHHHHHHHHhcCCc
Q 021470 191 AIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..+++.+|+|+.++.++..+.
T Consensus 213 ~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 213 NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp ------HHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHhccc
Confidence 145789999999999998764
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.6e-18 Score=140.63 Aligned_cols=203 Identities=13% Similarity=0.067 Sum_probs=133.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+. +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGN----EQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTV 77 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4468999999999999999999999999999999931 444322 12222 3467889999999999888876
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHH----HHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLV----DAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~----~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.+..++. ..+++.+ ..++|+ ||...... ..+.
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~ 151 (246)
T 2uvd_A 78 DVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTG-----NPGQ 151 (246)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC-----CTTB
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCC-----CCCC
Confidence 699999999965321 15666644444 4444566 678876 55322111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .+++++.++||.+..++...... .....+........+.+++|+|++++
T Consensus 152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~p~~~~~~~~dvA~~~~ 223 (246)
T 2uvd_A 152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDE--------NIKAEMLKLIPAAQFGEAQDIANAVT 223 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCT--------THHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 3455599988776542 57899999999987654332110 00000000011234789999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++..+. ..|+.+.+.|
T Consensus 224 ~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 224 FFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHcCchhcCCCCCEEEECc
Confidence 9997643 2367777754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-19 Score=145.49 Aligned_cols=204 Identities=14% Similarity=0.153 Sum_probs=133.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+.... .++. .+.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN-IDET--IASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-HHHH--HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh-HHHH--HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999983221 1111 12222 3468899999999999998887
Q ss_pred -cCCEEEEcCCC-Cccc--------------cchhHhHHHHHHHHHHh--------CCCceeec-CCCCCCcccccccCC
Q 021470 75 -LVDVVICAISG-VHIR--------------SHQILLQLKLVDAIKEA--------GNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 -~~d~v~~~~~~-~~~~--------------~~~~~~~~~l~~aa~~~--------~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|+|||+++. .... ..|+.++.++++++... +...++|+ |+..... .+..
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~ 159 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT----GGGP 159 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH----CCCT
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc----CCCC
Confidence 79999999986 2210 15666666666655421 11146665 4422111 0112
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
+...|..+|..++.+.+. .++++++++||.+.++........ . ......+.....+++++|+|++
T Consensus 160 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~dva~~ 231 (258)
T 3afn_B 160 GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD-V-------RDRISNGIPMGRFGTAEEMAPA 231 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH-H-------HHHHHTTCTTCSCBCGGGTHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH-H-------HHHHhccCCCCcCCCHHHHHHH
Confidence 234555599999887753 378999999999887654321000 0 0000111122368899999999
Q ss_pred HHHHhcCCcc---CCceEEecC
Q 021470 203 TMKAINDPRT---LNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~~---~~~~~~~~~ 221 (312)
++.++..+.. .|+.+++.|
T Consensus 232 ~~~l~~~~~~~~~~G~~~~v~g 253 (258)
T 3afn_B 232 FLFFASHLASGYITGQVLDING 253 (258)
T ss_dssp HHHHHCHHHHTTCCSEEEEEST
T ss_pred HHHHhCcchhccccCCEEeECC
Confidence 9999976432 466777754
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.8e-18 Score=136.22 Aligned_cols=186 Identities=17% Similarity=0.205 Sum_probs=122.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ .++.++.+|++|++++.++++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARD-----EKRLQALAAEL--EGALPLPGDVREEGDWARAVAAMEEAFG 77 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3679999999999999999999999999999998 5544322 222 278999999999998888765
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... ..|+.++. .+++++++.+ ..++|+ |+...... ..+...|.
T Consensus 78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~~~Y~ 151 (234)
T 2ehd_A 78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNP-----FKGGAAYN 151 (234)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSC-----CTTCHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCC-----CCCCchhh
Confidence 689999999864321 14555554 5555566666 778886 55433211 12223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++++++||.+........ . .. ..+++.+|+|++++.++.
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~-~~----------~~~~~~~dvA~~~~~l~~ 212 (234)
T 2ehd_A 152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT--------P-GQ----------AWKLKPEDVAQAVLFALE 212 (234)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------------CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc--------c-cc----------cCCCCHHHHHHHHHHHhC
Confidence 599988776542 578999999998765432210 0 00 115799999999999998
Q ss_pred CCc-cCCceEEec
Q 021470 209 DPR-TLNRTMYLR 220 (312)
Q Consensus 209 ~~~-~~~~~~~~~ 220 (312)
++. ...+...+.
T Consensus 213 ~~~~~~~g~~~~~ 225 (234)
T 2ehd_A 213 MPGHAMVSEIELR 225 (234)
T ss_dssp SCCSSCCCEEECC
T ss_pred CCcccccceEEEe
Confidence 764 334444443
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=143.43 Aligned_cols=203 Identities=12% Similarity=0.072 Sum_probs=136.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+........++..+++|++|++++.++++ +
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVN-----EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 555543322224678899999999999888876 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.++.++++++.. .+ ..++|+ |+...... ..+...|..
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~a 175 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSA-----IADRTAYVA 175 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcC-----CCCChhHHH
Confidence 89999999965321 1677777777777643 34 457775 54332211 122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEE---eCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVL---LGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+. .++++..++||.+........... ....... .........+.+++|+|++++.+
T Consensus 176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L 250 (277)
T 4dqx_A 176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE-----AKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFL 250 (277)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT-----CSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc-----ccchhHHHHHHHhcCcccCCcCHHHHHHHHHHH
Confidence 99998877653 478899999999876542211000 0000000 11122233567899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|+.+++.|
T Consensus 251 ~s~~~~~itG~~i~vdG 267 (277)
T 4dqx_A 251 ASDRSRFATGSILTVDG 267 (277)
T ss_dssp HSGGGTTCCSCEEEESS
T ss_pred hCCccCCCcCCEEEECC
Confidence 97653 2467777764
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=145.34 Aligned_cols=207 Identities=12% Similarity=0.044 Sum_probs=137.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++..+.+|+.|++++.++++
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK-----QENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL 88 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 444322 22232 3457889999999998888776
Q ss_pred --cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+..++++++. +.+ ..++|+ |+...... ..+..
T Consensus 89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 162 (260)
T 2zat_A 89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHP-----FPNLG 162 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC-----CTTBH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCC-----CCCch
Confidence 79999999986421 0 156777766666654 455 678776 54332211 11223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++.+++||.+..++...... ................+.+++|+|++++.
T Consensus 163 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~v~~ 236 (260)
T 2zat_A 163 PYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM------DKARKEYMKESLRIRRLGNPEDCAGIVSF 236 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS------SHHHHHHHHHHHTCSSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc------ChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 455599998887764 37889999999887654321100 00000000000112357899999999999
Q ss_pred HhcCCcc--CCceEEecCCCCcCC
Q 021470 206 AINDPRT--LNRTMYLRPPKNILS 227 (312)
Q Consensus 206 ~l~~~~~--~~~~~~~~~~~~~~s 227 (312)
++..+.. .|+.+++.|. ...|
T Consensus 237 l~s~~~~~~tG~~~~vdgG-~~~s 259 (260)
T 2zat_A 237 LCSEDASYITGETVVVGGG-TASR 259 (260)
T ss_dssp HTSGGGTTCCSCEEEESTT-CCCC
T ss_pred HcCcccCCccCCEEEECCC-cccc
Confidence 9876532 4677888653 3443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=150.67 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=137.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 81 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999999999998 444322 12222 2357889999999999888776
Q ss_pred ----cCCEEEEcCCCCcccc------chhHh----HHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 75 ----LVDVVICAISGVHIRS------HQILL----QLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~------~~~~~----~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
++|++||+++.....+ .|+.+ ++.++.++++.+ ...++|+ |+...... ..+...|..+
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~s 156 (267)
T 2gdz_A 82 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----VAQQPVYCAS 156 (267)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTCHHHHHH
T ss_pred HHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC-----CCCCchHHHH
Confidence 4799999999754221 45553 455555555442 1356775 54332111 1112345559
Q ss_pred HHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 138 KMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 138 K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
|..++.+.+. .++++++++||.+..+.............................+++++|+|++++.++.
T Consensus 157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s 236 (267)
T 2gdz_A 157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhc
Confidence 9988776553 4788999999998765433211000000000000000000112347899999999999998
Q ss_pred CCccCCceEEecCCCCcCCHHH
Q 021470 209 DPRTLNRTMYLRPPKNILSQRE 230 (312)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~s~~e 230 (312)
++...|+.+++.++. .+++.|
T Consensus 237 ~~~~~G~~~~v~gg~-~~~~~~ 257 (267)
T 2gdz_A 237 DDALNGAIMKITTSK-GIHFQD 257 (267)
T ss_dssp CTTCSSCEEEEETTT-EEEECC
T ss_pred CcCCCCcEEEecCCC-cccccC
Confidence 766667888887543 555544
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-19 Score=143.39 Aligned_cols=200 Identities=11% Similarity=0.056 Sum_probs=132.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHHHh-hhhc--cCCCeE-EEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQML-LSFK--EQGAKL-VSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~l~--~~~~~~-v~~D~~d~~~l~~~~~--- 74 (312)
|++|+||||+|+||++++++|+++|++|+++ .|+ +++.+.. +.+. ..++.. +.+|++|++++.++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQN-----REKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAA 75 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC-----HHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999998 676 4443321 2222 235666 8999999998888764
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|+|||+++..... ..|+.+ ++.+++++++.+ ..++|+ |+...... ..+.
T Consensus 76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~-----~~~~ 149 (245)
T 2ph3_A 76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILG-----NPGQ 149 (245)
T ss_dssp HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHC-----CSSB
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccC-----CCCC
Confidence 799999999865321 145666 555566666677 788886 55321111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .+++++++|||.+.++........ . . .. .........+++++|+|++++
T Consensus 150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~--~--~~---~~~~~~~~~~~~~~dva~~~~ 221 (245)
T 2ph3_A 150 ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQE-V--K--EA---YLKQIPAGRFGRPEEVAEAVA 221 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH-H--H--HH---HHHTCTTCSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHH-H--H--HH---HHhcCCCCCCcCHHHHHHHHH
Confidence 3455599988777653 378999999999887654321100 0 0 00 000011235789999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++..+. ..|+.+++.|
T Consensus 222 ~l~~~~~~~~~G~~~~v~g 240 (245)
T 2ph3_A 222 FLVSEKAGYITGQTLCVDG 240 (245)
T ss_dssp HHTSGGGTTCCSCEEEEST
T ss_pred HHhCcccccccCCEEEECC
Confidence 9997653 2367777753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=141.71 Aligned_cols=201 Identities=12% Similarity=0.043 Sum_probs=137.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc---cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK---EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS-----TADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544432 22232 2468899999999999888776
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCC-cccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTD-PAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~-~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.++.++++++... + ..++|+ |+.... .. ..+.
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~ 158 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG-----YPGW 158 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC-----CTTC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC-----CCCC
Confidence 799999999965421 25777777777776654 5 567775 543321 11 1222
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .|+++..++||.+........... .............+.+.+|+|+++.
T Consensus 159 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 159 SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEE--------YIASMARSIPAGALGTPEDIGHLAA 230 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHH--------HHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 3455599998887763 589999999999876543211100 0000001111224678999999999
Q ss_pred HHhcCCc--cCCceEEecCC
Q 021470 205 KAINDPR--TLNRTMYLRPP 222 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~~ 222 (312)
.++..+. ..|+.+.+.|.
T Consensus 231 ~L~s~~~~~itG~~i~vdGG 250 (262)
T 3pk0_A 231 FLATKEAGYITGQAIAVDGG 250 (262)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCccccCCcCCEEEECCC
Confidence 9997653 34677888643
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=140.82 Aligned_cols=202 Identities=12% Similarity=0.047 Sum_probs=138.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... +. ..+.+ ..++.++++|++|++++.++++ +
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~--~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDL--AG--AAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCH--HH--HHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHH--HH--HHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999985432 11 11223 5678999999999999988876 7
Q ss_pred CCEEEEcCCCCcc-c---------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 76 VDVVICAISGVHI-R---------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~-~---------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
+|++||+++.... . +.|+.+..++++++ ++.+ ..++|+ |+...... ..+...|
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y 159 (271)
T 3tzq_B 86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAA-----YDMSTAY 159 (271)
T ss_dssp CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSB-----CSSCHHH
T ss_pred CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCC-----CCCChHH
Confidence 8999999997521 0 16788888888887 5555 567775 54332211 1222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++..++||.+........... .....+........+.+.+|+|++++.++
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~p~dvA~~v~~L~ 232 (271)
T 3tzq_B 160 ACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ-------PIVDIFATHHLAGRIGEPHEIAELVCFLA 232 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CH-------HHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 5599998877653 578899999999876543311000 00000111112234678999999999999
Q ss_pred cCCc--cCCceEEecCC
Q 021470 208 NDPR--TLNRTMYLRPP 222 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~~ 222 (312)
.... ..|+.+++.|.
T Consensus 233 s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 233 SDRAAFITGQVIAADSG 249 (271)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CcccCCcCCCEEEECCC
Confidence 7653 24677788643
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-18 Score=141.08 Aligned_cols=200 Identities=12% Similarity=0.061 Sum_probs=135.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|+++.|+ .++.+............+++|++|++++.++++ +
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATS-----ESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998 555543322223457889999999999888876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.++.++++++.. .+ ..++|+ ||..... +..+...|..
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~a 157 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTM-----GNAGQANYAA 157 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-----CCTTCHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC-----CCCCChHHHH
Confidence 89999999975421 1577777777777643 45 567775 5422111 1122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++..++||.+.......... ..............+.+++|+|++++.++..
T Consensus 158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 229 (248)
T 3op4_A 158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND--------EQRTATLAQVPAGRLGDPREIASAVAFLASP 229 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH--------HHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH--------HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 99988777653 47889999999886554322110 0000001111223577999999999999876
Q ss_pred Ccc--CCceEEecC
Q 021470 210 PRT--LNRTMYLRP 221 (312)
Q Consensus 210 ~~~--~~~~~~~~~ 221 (312)
... .|+.+++.|
T Consensus 230 ~~~~itG~~i~vdg 243 (248)
T 3op4_A 230 EAAYITGETLHVNG 243 (248)
T ss_dssp GGTTCCSCEEEEST
T ss_pred ccCCccCcEEEECC
Confidence 532 367777764
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=142.45 Aligned_cols=192 Identities=17% Similarity=0.103 Sum_probs=134.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~~ 76 (312)
+++++||||+|+||++++++|+++|++|++++|+.. ...+.++++|++|++++.++++ ++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------------ccceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 479999999999999999999999999999999843 1346889999999999999887 78
Q ss_pred CEEEEcCCCCccc------------------cchhHhHHHHHHHHHHhC---------CCceeec-CCCCCCcccccccC
Q 021470 77 DVVICAISGVHIR------------------SHQILLQLKLVDAIKEAG---------NVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 77 d~v~~~~~~~~~~------------------~~~~~~~~~l~~aa~~~~---------~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
|++||+++..... ..|+..+.++++++...- ...++|+ |+..... +.
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~ 142 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-----GQ 142 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-----CC
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-----CC
Confidence 9999999864321 157777888888887642 0126775 5432211 11
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDEDDIA 200 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~a 200 (312)
.+...|..+|..++.+.+. .+++++++|||.+.++.......... ......... ..+++++|+|
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~dva 214 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAK--------ASLAAQVPFPPRLGRPEEYA 214 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHH--------HHHHTTCCSSCSCCCHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHH--------HHHHhhCCCcccCCCHHHHH
Confidence 2233455599988877653 38899999999998765432211000 000000011 2467899999
Q ss_pred HHHHHHhcCCccCCceEEecC
Q 021470 201 MYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~~~~~~~~~~~ 221 (312)
++++.++.++...|+.+++.|
T Consensus 215 ~~~~~l~~~~~~~G~~~~v~g 235 (242)
T 1uay_A 215 ALVLHILENPMLNGEVVRLDG 235 (242)
T ss_dssp HHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHhcCCCCCCcEEEEcC
Confidence 999999988544577888864
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=142.02 Aligned_cols=203 Identities=13% Similarity=0.022 Sum_probs=133.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC-CCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR-PEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++|+||||+|+||++++++|+++|++|++++| + +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSK-----EDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCC-----hHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999 5 433321 12222 2457889999999999888776
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|+|||+++..... ..|+.+..++++++... +...++|+ |+..... +..+..
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----~~~~~~ 156 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----PWPLFV 156 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----CCTTCH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----CCCCcc
Confidence 789999999865321 15666667666665543 21356665 5533221 122234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++++++||.+.++......... . ....+........+++++|+|++++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (261)
T 1gee_A 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP----E--QRADVESMIPMGYIGEPEEIAAVAAW 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH----H--HHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccCh----h--HHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 455599888776653 4899999999998876543210000 0 00000000111347899999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+++.|
T Consensus 231 l~~~~~~~~~G~~~~v~g 248 (261)
T 1gee_A 231 LASSEASYVTGITLFADG 248 (261)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCccccCCCCcEEEEcC
Confidence 987542 2466777754
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=137.39 Aligned_cols=182 Identities=12% Similarity=0.167 Sum_probs=123.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|++++++||||+|+||++++++|+++|++|++++|+ .++.+........++.++++|++|++++.++++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR-----YQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 788899999999999999999999999999999998 555443222213368999999999998888775
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... +.|+.+...+++++... + .++|. ||....... .....|
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~-----~~~~~Y 148 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGK-----ANESLY 148 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSC-----SSHHHH
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCC-----CCCcHH
Confidence 579999999975321 16777787777777542 3 26664 443221111 112345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++..++||.+...+...... .....+.+.+|+|++++.++
T Consensus 149 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~pedvA~~v~~l~ 211 (235)
T 3l6e_A 149 CASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------------VDPSGFMTPEDAAAYMLDAL 211 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------CBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------------CCCcCCCCHHHHHHHHHHHH
Confidence 5599998877763 36778889999876543221100 01125789999999999999
Q ss_pred cCCc
Q 021470 208 NDPR 211 (312)
Q Consensus 208 ~~~~ 211 (312)
..+.
T Consensus 212 ~~~~ 215 (235)
T 3l6e_A 212 EARS 215 (235)
T ss_dssp CCCS
T ss_pred hCCC
Confidence 8654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.6e-18 Score=138.18 Aligned_cols=198 Identities=12% Similarity=0.027 Sum_probs=116.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ...+.++++|++|++++.++++
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN-----AEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 2222 3467889999999999888876
Q ss_pred --cCCEEEEcCCCCc---c------c--------cchhHhH----HHHHHHHHHhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 --LVDVVICAISGVH---I------R--------SHQILLQ----LKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 --~~d~v~~~~~~~~---~------~--------~~~~~~~----~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++... . . ..|+.+. +.++..+++.+ ..++|+ |+......
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-------- 154 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWLY-------- 154 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccCC--------
Confidence 7899999998731 1 0 1566664 44455555556 567775 54332211
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+..+......... .............+.+++|+|+++
T Consensus 155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~ 227 (253)
T 3qiv_A 155 SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE-------MVDDIVKGLPLSRMGTPDDLVGMC 227 (253)
T ss_dssp -----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------CCHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH-------HHHHHhccCCCCCCCCHHHHHHHH
Confidence 23455599988877653 3678889999998765433211100 000011111223456789999999
Q ss_pred HHHhcCCcc--CCceEEecC
Q 021470 204 MKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~~--~~~~~~~~~ 221 (312)
+.++..+.. .|+.+++.|
T Consensus 228 ~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 228 LFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp HHHHSGGGTTCCSCEEEC--
T ss_pred HHHcCccccCCCCCEEEECC
Confidence 999976532 467777754
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-17 Score=136.05 Aligned_cols=205 Identities=14% Similarity=0.048 Sum_probs=134.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT-----KEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999998 5554322 2232 2468889999999999888776
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH-----HhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK-----EAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~-----~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.++.++++++. +.+ ..++|. |+..... +..+
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~ 152 (257)
T 3imf_A 79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAWD-----AGPG 152 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGGS-----CCTT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhcc-----CCCC
Confidence 689999999964321 167777778777773 333 456765 4432211 1112
Q ss_pred CCchhhhHHHHHHHHH--------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIE--------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~--------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
...|..+|..++.+.+ ..|+++..++||.+............ .... ...........+.+++|+|++
T Consensus 153 ~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~---~~~~--~~~~~~~p~~r~~~pedvA~~ 227 (257)
T 3imf_A 153 VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS---EEMA--KRTIQSVPLGRLGTPEEIAGL 227 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----------CCS--HHHHTTSTTCSCBCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC---HHHH--HHHHhcCCCCCCcCHHHHHHH
Confidence 2344459988776654 34899999999988654322110000 0000 000111122357799999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++..+. ..|+.+.+.|
T Consensus 228 v~~L~s~~~~~itG~~i~vdG 248 (257)
T 3imf_A 228 AYYLCSDEAAYINGTCMTMDG 248 (257)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHcCchhcCccCCEEEECC
Confidence 999997653 2467777764
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=141.69 Aligned_cols=205 Identities=12% Similarity=0.065 Sum_probs=135.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.+.. ..++.++++|++|++++.++++ ++|++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 78 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQELEK--YPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGGGG--STTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHh--ccCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence 5789999999999999999999999999999998 555533221 2378899999999999887654 78999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
||+++..... +.|+.+..++++++. +.+ ..++|+ |+....... + .+...|..+|..
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~-~~~~~Y~~sK~a 153 (246)
T 2ag5_A 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG---V-VNRCVYSTTKAA 153 (246)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---C-TTBHHHHHHHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCC---C-CCCccHHHHHHH
Confidence 9999965421 156677777777764 445 677776 553322111 0 022345559999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-- 211 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-- 211 (312)
++.+.+. .++++++++||.+.++.......... ........+........+.+++|+|++++.++..+.
T Consensus 154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~ 231 (246)
T 2ag5_A 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG--NPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY 231 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS--SHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhccc--CcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence 8887764 38899999999988764322100000 000000000000111246899999999999997653
Q ss_pred cCCceEEecC
Q 021470 212 TLNRTMYLRP 221 (312)
Q Consensus 212 ~~~~~~~~~~ 221 (312)
..|+.+.+.|
T Consensus 232 ~tG~~i~vdg 241 (246)
T 2ag5_A 232 VTGNPVIIDG 241 (246)
T ss_dssp CCSCEEEECT
T ss_pred CCCCEEEECC
Confidence 2367777754
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-18 Score=140.07 Aligned_cols=200 Identities=13% Similarity=0.102 Sum_probs=132.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ .++.+........++.++.+|+.|.+++.++++ ++|++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSN-----EEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999999999998 555543333224578999999999999999887 68999
Q ss_pred EEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
||+++..... +.|+.+..++++++. +.+ ..++|+ |+...... ..+...|..+|..
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a 162 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAG-----NPGQANYCASKAG 162 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--C-----CSCSHHHHHHHHH
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccC-----CCCCchhHHHHHH
Confidence 9999965421 156777777776664 345 567775 54332211 1122345559998
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc-
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT- 212 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~- 212 (312)
++.+.+. .++++..++||.+........... .............+.+++|+|+++..++.++..
T Consensus 163 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~ 234 (249)
T 3f9i_A 163 LIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEK--------QREAIVQKIPLGTYGIPEDVAYAVAFLASNNASY 234 (249)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHH--------HHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCC
Confidence 8877653 478889999998876543321110 000011112234678899999999999986532
Q ss_pred -CCceEEecC
Q 021470 213 -LNRTMYLRP 221 (312)
Q Consensus 213 -~~~~~~~~~ 221 (312)
.|+.+++.|
T Consensus 235 ~tG~~~~vdg 244 (249)
T 3f9i_A 235 ITGQTLHVNG 244 (249)
T ss_dssp CCSCEEEEST
T ss_pred ccCcEEEECC
Confidence 367777754
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=142.45 Aligned_cols=200 Identities=10% Similarity=0.071 Sum_probs=131.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|+++|++|+++.|+ +++.+. .+.+. ..++.++.+|++|++++.++++
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC-----HHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998887 444332 22232 3467889999999999988874
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... ..|+.+..++++++. +.+ ..++|+ |+..... +..+...
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-----~~~~~~~ 192 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT-----GNVGQAN 192 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----CCTTCHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc-----CCCCCch
Confidence 689999999865321 156667656555554 456 678876 5532211 1112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++++++||.+..+........ . . .. .........+++++|+|++++.+
T Consensus 193 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~--~--~~---~~~~~~~~~~~~~~dvA~~~~~l 264 (285)
T 2c07_A 193 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ-I--K--KN---IISNIPAGRMGTPEEVANLACFL 264 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH-H--H--HH---HHTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHH-H--H--HH---HHhhCCCCCCCCHHHHHHHHHHH
Confidence 55599988777653 478999999999876643321100 0 0 00 00001112478999999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.++. ..|+.+++.|
T Consensus 265 ~~~~~~~~~G~~i~v~g 281 (285)
T 2c07_A 265 SSDKSGYINGRVFVIDG 281 (285)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCCcCCCCCCEEEeCC
Confidence 97653 2466777753
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=138.50 Aligned_cols=201 Identities=10% Similarity=0.005 Sum_probs=132.7
Q ss_pred CcEEEEEcCCc-hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTG-YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+| .||++++++|+++|++|++++|+ .++.+. .+.+ ...++.++++|++|++++.++++
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH-----ERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC-----HHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 57899999998 59999999999999999999998 444322 2222 23578999999999999888775
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh-----CCCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA-----GNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~-----~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... ..|+.+..++++++... + ..++|+ |+..... +..+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~ 170 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-GGVIVNNASVLGWR-----AQHS 170 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-CEEEEEECCGGGTC-----CCTT
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEeCCHHHcC-----CCCC
Confidence 679999999965421 15777778888877654 3 456665 4432211 1122
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+...+....... ..............+.+++|+|+++
T Consensus 171 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~dva~~i 243 (266)
T 3o38_A 171 QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS-------ELLDRLASDEAFGRAAEPWEVAATI 243 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------CCTTSSCCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH-------HHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 23455599998877653 578899999998876544322111 1111111222334578999999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+++.|
T Consensus 244 ~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 244 AFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHcCccccCccCCEEEEcC
Confidence 99997642 3467777753
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=141.54 Aligned_cols=207 Identities=10% Similarity=-0.006 Sum_probs=136.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+........++..+++|++|++++.++++ +
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADID-----GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998 555443322225678999999999998888775 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++.. .+ ..++|+ |+...... ..+...|..
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~-----~~~~~~Y~a 177 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVA-----VGGTGAYGM 177 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC-----CCCchhHHH
Confidence 89999999975421 1577777777777654 44 456765 54332211 112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+........................ .......+.+++|+|++++.++..
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~pedvA~~v~~L~s~ 256 (277)
T 3gvc_A 178 SKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSM-IARLQGRMAAPEEMAGIVVFLLSD 256 (277)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHH-HHHHHSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhh-hhccccCCCCHHHHHHHHHHHcCC
Confidence 99998877663 5788999999998876433211100000000000000 000112467899999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..|+.+++.|
T Consensus 257 ~a~~itG~~i~vdG 270 (277)
T 3gvc_A 257 DASMITGTTQIADG 270 (277)
T ss_dssp GGTTCCSCEEEEST
T ss_pred ccCCccCcEEEECC
Confidence 53 2467777764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=144.13 Aligned_cols=208 Identities=14% Similarity=0.117 Sum_probs=136.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544432 22232 3467889999999999888776
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh------CCCceeec-CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA------GNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~------~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.++.++++++... + ..++|+ |+...... ..+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~ 170 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQG-----VVHA 170 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSC-----CTTC
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccC-----CCCC
Confidence 689999999864321 15777888888886544 5 567776 55332211 1122
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCC--CccCCC-CCeeEEeCCCCcceeeeeHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQP--GSILPS-KDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
..|..+|..++.+.+. .++++++++||.+..++....... ...... ......+........+++++|+|+
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~ 250 (277)
T 2rhc_B 171 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 250 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 3455599998877664 368899999999877643221000 000000 000000000111235789999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++.++..+. ..|+.+++.|
T Consensus 251 ~v~~l~s~~~~~~tG~~~~vdG 272 (277)
T 2rhc_B 251 MVAYLIGPGAAAVTAQALNVCG 272 (277)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCCCCcEEEECC
Confidence 9999987653 2467777764
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.5e-18 Score=137.71 Aligned_cols=200 Identities=12% Similarity=0.081 Sum_probs=135.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATS-----QASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 2222 3468899999999999888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..++++++.. .+ ..++|+ |+..... +..+...
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 153 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSA-----GNPGQTN 153 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----CCTTCHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc-----CCCCcHH
Confidence 479999999976421 1567777777776644 44 457775 4422111 1122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+.......... ..............+.+++|+|+++..+
T Consensus 154 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~i~~l 225 (247)
T 3lyl_A 154 YCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD--------EQKSFIATKIPSGQIGEPKDIAAAVAFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH--------HHHHHHHTTSTTCCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH--------HHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 55599987777653 47889999999887654332111 0001111222334678999999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+.+++.|
T Consensus 226 ~s~~~~~~tG~~i~vdg 242 (247)
T 3lyl_A 226 ASEEAKYITGQTLHVNG 242 (247)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCCcCCccCCEEEECC
Confidence 87653 2467778854
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.1e-18 Score=140.34 Aligned_cols=200 Identities=12% Similarity=0.078 Sum_probs=132.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|+++.|+ .++.+........++.++++|++|++++.++++ +
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 555543322224578999999999999888876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++.+ .+++.+ ..++|+ ||....... .+...|..
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~-----~~~~~Y~a 175 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGN-----PGQTNYCA 175 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------CHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCC-----CCchhHHH
Confidence 89999999975421 156666444444 445556 567775 543322111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++..++||.+........... .............+.+.+|+|++++.++..
T Consensus 176 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~r~~~~edvA~~v~~L~s~ 247 (266)
T 3grp_A 176 AKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK--------QKEAIMAMIPMKRMGIGEEIAFATVYLASD 247 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99988776653 478899999999876543321110 000011112223567899999999999876
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..|+.+++.|
T Consensus 248 ~~~~itG~~i~vdG 261 (266)
T 3grp_A 248 EAAYLTGQTLHING 261 (266)
T ss_dssp GGTTCCSCEEEEST
T ss_pred cccCccCCEEEECC
Confidence 53 2467777754
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9.7e-18 Score=138.41 Aligned_cols=210 Identities=10% Similarity=0.056 Sum_probs=132.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHH-HH-Hhhhhc---cCCCeEEEccCCCHHHHHHHhc-
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEK-VQ-MLLSFK---EQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~-~~~~l~---~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++ .+ ..+.+. ..++.++++|++|++++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 76 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG-----DAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS-----CHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCC-----cchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHH
Confidence 345789999999999999999999999999999997 333 22 122222 3467889999999999888776
Q ss_pred ------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCC
Q 021470 75 ------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++..... ..|+.+..++++++. +.+ ..++|+ |+...... ..
T Consensus 77 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~ 150 (260)
T 1x1t_A 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA-----SA 150 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CT
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcC-----CC
Confidence 699999999865321 156666666666664 455 578775 54332111 11
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc--CCC-CCeeEEe-CCCCcceeeeeHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI--LPS-KDSVVLL-GDGNPKAIYVDEDD 198 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~v~~~D 198 (312)
+...|..+|..++.+.+. .+++++.++||.+..+........... ... ......+ ........+.+++|
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d 230 (260)
T 1x1t_A 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHH
Confidence 223455599998877753 378899999999877654321110000 000 0000000 00111235789999
Q ss_pred HHHHHHHHhcCCc--cCCceEEecC
Q 021470 199 IAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 199 ~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+|++++.++..+. ..|+.+++.|
T Consensus 231 va~~~~~l~s~~~~~~tG~~~~vdg 255 (260)
T 1x1t_A 231 LGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHhChhhcCCCCCEEEECC
Confidence 9999999997642 2466777753
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.4e-18 Score=139.87 Aligned_cols=203 Identities=13% Similarity=0.074 Sum_probs=132.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ..++.++++|++|++++.++++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 446799999999999999999999999999999998 5444322 223 4578899999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHH----HHHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+... ++..+++.+ .++|+ |+...... ..+...
T Consensus 78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~ 150 (253)
T 1hxh_A 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLP-----IEQYAG 150 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSC-----CTTBHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCC-----CCCCcc
Confidence 479999999965321 145544444 444444444 67775 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeC--CCCcceeeeeHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG--DGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~D~a~~ 202 (312)
|..+|..++.+.+. . ++++++++||.+.++......... . .... +.. .......+.+++|+|++
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~-~~~~-~~~~~~~~p~~~~~~~~dvA~~ 225 (253)
T 1hxh_A 151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---V-SKEM-VLHDPKLNRAGRAYMPERIAQL 225 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---C-CHHH-HBCBTTTBTTCCEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh---h-hHHH-HhhhhccCccCCCCCHHHHHHH
Confidence 55599998877654 3 899999999999876543211100 0 0000 000 01111347899999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++..+. ..|+.+.+.|
T Consensus 226 ~~~l~s~~~~~~tG~~~~vdg 246 (253)
T 1hxh_A 226 VLFLASDESSVMSGSELHADN 246 (253)
T ss_dssp HHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHcCccccCCCCcEEEECC
Confidence 999997653 2367777754
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-18 Score=141.19 Aligned_cols=204 Identities=14% Similarity=0.064 Sum_probs=135.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|++.|++|++++|+.... .+....+......++.++++|++|++++.++++ +
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPREL-SSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-HHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999984332 111111111112468899999999988887765 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCC-cccccccCCCCCchh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTD-PAKMANAMEPGRVTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~-~~~~~~~~~p~~~~~ 135 (312)
+|++||+++..... +.|+.++.++++++ ++.+ ..++|+ |+.... .. ..+...|.
T Consensus 120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~-----~~~~~~Y~ 193 (293)
T 3rih_A 120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTG-----YPGWSHYG 193 (293)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBB-----CTTCHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCC-----CCCCHHHH
Confidence 79999999975421 26777888888877 4556 567775 443321 11 12223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..++||.+............ ............+...+|+|++++.++.
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~p~~r~~~p~dvA~~v~fL~s 265 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEY--------ISGMARSIPMGMLGSPVDIGHLAAFLAT 265 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHH--------HHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHH--------HHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 599998877653 5899999999998875432211000 0000001111235678999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+++.|
T Consensus 266 ~~a~~itG~~i~vdG 280 (293)
T 3rih_A 266 DEAGYITGQAIVVDG 280 (293)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCCCCEEEECC
Confidence 643 2467777764
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.1e-18 Score=140.50 Aligned_cols=203 Identities=10% Similarity=0.095 Sum_probs=135.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
+.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ...++.++++|++|++++.++++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998 5444321 222 13467889999999998888776
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCC-CCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFG-TDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g-~~~~~~~~~~~p 130 (312)
++|++||+++..... ..|+.++.++++++. +.+ ..++|+ |+.. ... +..+
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~ 168 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV-----TMPN 168 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC-----CSSS
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc-----CCCC
Confidence 689999999965421 156777777777664 344 567775 5543 211 1112
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++++++||.+...+....... ......+........+.+.+|+|+++
T Consensus 169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~~~~~p~dvA~~v 242 (267)
T 1vl8_A 169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD------PEKLDYMLKRIPLGRTGVPEDLKGVA 242 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC------HHHHHHHHHTCTTSSCBCGGGGHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC------hHHHHHHHhhCCCCCCcCHHHHHHHH
Confidence 23455599998887753 489999999998876543211100 00000000001112467899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+.+.|
T Consensus 243 ~~l~s~~~~~itG~~i~vdG 262 (267)
T 1vl8_A 243 VFLASEEAKYVTGQIIFVDG 262 (267)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHcCccccCCcCCeEEECC
Confidence 99997643 2466777753
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-17 Score=134.70 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=129.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-------ETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++|+||||+|+||+++++.|+++|+ +|++++|+ +++.+.+ ..+. ..++.++++|++|++++.++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 76 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRL 76 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC-----HHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHH
Confidence 47899999999999999999999998 99999998 4444322 2222 34578899999999998888
Q ss_pred hc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccc
Q 021470 73 VK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++ ++|+|||+++..... ..|+.++.++++++. +.+ ..++|+ |+......
T Consensus 77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~---- 151 (244)
T 2bd0_A 77 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA---- 151 (244)
T ss_dssp HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC----
T ss_pred HHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCC----
Confidence 76 699999999865321 157777777777764 345 677776 54332211
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
..+...|..+|..++.+.+. .++++++++||.+.++....... . . ...+++++|+
T Consensus 152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------~----------~-~~~~~~~~dv 213 (244)
T 2bd0_A 152 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------E----------M-QALMMMPEDI 213 (244)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------T----------T-GGGSBCHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------c----------c-cccCCCHHHH
Confidence 12223455599998877642 47889999999987764332100 0 0 2367899999
Q ss_pred HHHHHHHhcCCc
Q 021470 200 AMYTMKAINDPR 211 (312)
Q Consensus 200 a~~~~~~l~~~~ 211 (312)
|++++.++..+.
T Consensus 214 a~~~~~l~~~~~ 225 (244)
T 2bd0_A 214 AAPVVQAYLQPS 225 (244)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHHhCCc
Confidence 999999998753
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=136.09 Aligned_cols=197 Identities=11% Similarity=0.019 Sum_probs=133.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.... ..++.++++|++|++++.++++ +
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREAAE--AVGAHPVVMDVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--TTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH--HcCCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998 555432211 1258899999999999888775 4
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++... + ..++|+ |+.. .... .+...|..
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~-----~~~~~Y~a 150 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGN-----LGQANYAA 150 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCC-----TTCHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCC-----CCchhHHH
Confidence 89999999964321 16777777777777653 4 567776 5544 2111 11234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .+++++.++||.+..+........ . . .. .........+.+.+|+|++++.++..
T Consensus 151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~--~--~~---~~~~~p~~~~~~~~dvA~~v~~l~s~ 222 (245)
T 1uls_A 151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK-V--R--EK---AIAATPLGRAGKPLEVAYAALFLLSD 222 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH-H--H--HH---HHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHH-H--H--HH---HHhhCCCCCCcCHHHHHHHHHHHhCc
Confidence 99988776653 478999999999876543221000 0 0 00 00000112467999999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
+. ..|+.+.+.|
T Consensus 223 ~~~~~tG~~~~vdg 236 (245)
T 1uls_A 223 ESSFITGQVLFVDG 236 (245)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCcCCEEEECC
Confidence 43 2467777764
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.7e-18 Score=139.56 Aligned_cols=205 Identities=14% Similarity=0.098 Sum_probs=133.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 4444321 2221 3468889999999999888876
Q ss_pred ----cCCEEEEcCCCCcc-c--------------cchhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHI-R--------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~-~--------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.+.. .++..+++.+ ..++|+ |+...... ..+
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~ 161 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG-----IGN 161 (267)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB-----CSS
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccC-----CCC
Confidence 68999999986432 1 14554444 4555556666 678775 54332211 112
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccC--C-CCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGL--C-QPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
...|..+|..++.+.+. .+++++.++||.+..+..... . ... ........+........+.+++|+|
T Consensus 162 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~~dvA 238 (267)
T 1iy8_A 162 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE---NPRKAAEEFIQVNPSKRYGEAPEIA 238 (267)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT---CHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh---hhhhHHHHHhccCCCCCCcCHHHHH
Confidence 23455599998877653 489999999999877643221 0 000 0000000000111123477999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++..+. ..|+.+.+.|
T Consensus 239 ~~v~~l~s~~~~~~tG~~i~vdG 261 (267)
T 1iy8_A 239 AVVAFLLSDDASYVNATVVPIDG 261 (267)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHcCccccCCCCCEEEECC
Confidence 99999987652 2467777764
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-17 Score=140.02 Aligned_cols=202 Identities=12% Similarity=0.123 Sum_probs=134.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh-------ccCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF-------KEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l-------~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ .++.+. .+.+ ...++.++++|++|++++.++++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence 4789999999999999999999999999999998 444322 1222 13468899999999999988876
Q ss_pred -------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccC
Q 021470 75 -------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 -------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|+|||+++..... ..|+.++.++++++... + ..++|+ |+.. ....
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~----- 165 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGF----- 165 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCC-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCC-----
Confidence 489999999954311 26788888888887652 2 356665 5544 1111
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEeccccccccc-ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFL-GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.....|..+|..++.+.+. .+++++++|||.+.+... ............ .. . .......+.+++|+|
T Consensus 166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~---~-~~~p~~~~~~~~dvA 240 (303)
T 1yxm_A 166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE-GS---F-QKIPAKRIGVPEEVS 240 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT-TG---G-GGSTTSSCBCTHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHH-HH---H-hcCcccCCCCHHHHH
Confidence 1122344489887766653 478999999999987631 111100000000 00 0 001112478999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++..+. ..|+.+++.|
T Consensus 241 ~~i~~l~~~~~~~~~G~~~~v~g 263 (303)
T 1yxm_A 241 SVVCFLLSPAASFITGQSVDVDG 263 (303)
T ss_dssp HHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCcccccCCCcEEEECC
Confidence 99999997643 2467777764
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=141.61 Aligned_cols=189 Identities=15% Similarity=0.184 Sum_probs=130.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++. +.+...++.++++|++|.+++.++++ +
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~---~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARR-----VERL---KALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHH---HTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHH---HHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4689999999999999999999999999999998 5554 34445578999999999998888876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++ ++.+ ..++|+ ||...... ..+...|..
T Consensus 88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~-----~~~~~~Y~a 161 (266)
T 3p19_A 88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT-----FPDHAAYCG 161 (266)
T ss_dssp EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----CTTCHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC-----CCCCchHHH
Confidence 89999999975421 15677777755555 4556 567775 54332211 112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+...+......... ....... ......+++++|+|++++.++++
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~--~~~~~r~~~pedvA~av~~l~~~ 235 (266)
T 3p19_A 162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQI----KDGYDAW--RVDMGGVLAADDVARAVLFAYQQ 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHH----HHHHHHH--HHHTTCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhh----hHHHHhh--cccccCCCCHHHHHHHHHHHHcC
Confidence 99998877653 58999999999987665432211000 0000000 00112468999999999999988
Q ss_pred Cc
Q 021470 210 PR 211 (312)
Q Consensus 210 ~~ 211 (312)
+.
T Consensus 236 ~~ 237 (266)
T 3p19_A 236 PQ 237 (266)
T ss_dssp CT
T ss_pred CC
Confidence 75
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=137.93 Aligned_cols=206 Identities=13% Similarity=0.116 Sum_probs=138.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||++++++|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK-----SEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 4444322 2222 3568889999999998888776
Q ss_pred --cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR-------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... +.|+.++.++++++. +.+ ..++|+ |+..... +..+...|
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~Y 160 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGEN-----TNVRMASY 160 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTC-----CCTTCHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcC-----CCCCchHH
Confidence 789999999975421 157777778877764 444 467775 5433211 11222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++..++||.+............ .............+.+++|+|++++.++
T Consensus 161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~p~~r~~~~~dva~~~~~L~ 233 (256)
T 3gaf_A 161 GSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE-------IERAMLKHTPLGRLGEAQDIANAALFLC 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH-------HHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH-------HHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 5599998877763 4788999999998765433211100 0000111122235778999999999999
Q ss_pred cCCc--cCCceEEecCCCCcCC
Q 021470 208 NDPR--TLNRTMYLRPPKNILS 227 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~~~~~~s 227 (312)
.... ..|+.+++.| +...+
T Consensus 234 s~~~~~itG~~i~vdg-G~~~~ 254 (256)
T 3gaf_A 234 SPAAAWISGQVLTVSG-GGVQE 254 (256)
T ss_dssp SGGGTTCCSCEEEEST-TSCCC
T ss_pred CCcccCccCCEEEECC-Ccccc
Confidence 7643 2467788865 33444
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=138.82 Aligned_cols=205 Identities=9% Similarity=0.074 Sum_probs=132.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHh------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAV------ 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~------ 73 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.+++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544432 12222 346788999999999888877
Q ss_pred --ccCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 74 --KLVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 74 --~~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
.++|++||+++..... +.|+.++.++++++. +.+ ..++|+ |+...... ..+..
T Consensus 96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~ 169 (273)
T 1ae1_A 96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA-----LPSVS 169 (273)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC-----CTTCH
T ss_pred cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCC-----CCCcc
Confidence 4689999999865321 157777777777763 455 577775 54332211 11223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe-eEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS-VVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..++.+.+. .+++++.++||.+..+......... ..... ............+.+++|+|++++
T Consensus 170 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 246 (273)
T 1ae1_A 170 LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcc---cCcHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 455599998877653 4889999999998876543211100 00000 000000011124678999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++..+. ..|+.+.+.|
T Consensus 247 ~l~s~~~~~~tG~~i~vdG 265 (273)
T 1ae1_A 247 FLCFPAASYITGQIIWADG 265 (273)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCccccCcCCCEEEECC
Confidence 9987543 2467777764
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.4e-17 Score=135.86 Aligned_cols=197 Identities=12% Similarity=0.044 Sum_probs=130.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.. +. .+.+...++.++.+|++|++++.++++ +
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-----~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-----AS--VTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-----HH--HHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-----HH--HHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999999843 21 122333468999999999998888775 6
Q ss_pred CCEEEEcCCCCccc-------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 76 VDVVICAISGVHIR-------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
+|++||+++..... +.|+.++.++++++.. .+ ..++|+ |+..... +..+...|..+
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~as 173 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRK-----GSSKHIAYCAT 173 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGT-----CCSSCHHHHHH
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC-----CCCCcHhHHHH
Confidence 89999999965421 1567777777777654 34 457775 5433211 11222345559
Q ss_pred HHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 138 KMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 138 K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
|..++.+.+. .++++..++||.+.......... ............+..++|+|++++.++..+.
T Consensus 174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~----------~~~~~~~~p~~r~~~~edva~~v~~L~~~~~ 243 (260)
T 3gem_A 174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAY----------RANALAKSALGIEPGAEVIYQSLRYLLDSTY 243 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------------CCSCCCCCTHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHH----------HHHHHhcCCCCCCCCHHHHHHHHHHHhhCCC
Confidence 9998877663 24778889999876442211000 0000001111235578999999999996655
Q ss_pred cCCceEEecCC
Q 021470 212 TLNRTMYLRPP 222 (312)
Q Consensus 212 ~~~~~~~~~~~ 222 (312)
..|+.+++.|.
T Consensus 244 itG~~i~vdGG 254 (260)
T 3gem_A 244 VTGTTLTVNGG 254 (260)
T ss_dssp CCSCEEEESTT
T ss_pred CCCCEEEECCC
Confidence 56778888643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=139.40 Aligned_cols=199 Identities=12% Similarity=0.034 Sum_probs=132.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
++|+||||+|+||++++++|+++|++|+++ .|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS-----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999995 676 4443221 2222 3467889999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.++.++++++.. .+ ..++|+ |+..... +..+...
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-----~~~~~~~ 150 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI-----GNIGQAN 150 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----CCTTCHH
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC-----CCCCCcc
Confidence 689999999865421 1567777777777765 35 678776 5532211 1112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++++++||.+.++......... . .. .........+++++|+|++++.+
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~--~~---~~~~~~~~~~~~~~dva~~~~~l 222 (244)
T 1edo_A 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDM---E--KK---ILGTIPLGRTGQPENVAGLVEFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHH---H--HH---HHTSCTTCSCBCHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHH---H--HH---HhhcCCCCCCCCHHHHHHHHHHH
Confidence 55599988776653 4788999999998876443211100 0 00 00011113478999999999999
Q ss_pred hcCCc---cCCceEEecC
Q 021470 207 INDPR---TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~---~~~~~~~~~~ 221 (312)
+..+. ..|+.+++.|
T Consensus 223 ~~~~~~~~~~G~~~~v~g 240 (244)
T 1edo_A 223 ALSPAASYITGQAFTIDG 240 (244)
T ss_dssp HHCSGGGGCCSCEEEEST
T ss_pred hCCCccCCcCCCEEEeCC
Confidence 85442 2367777754
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-17 Score=135.76 Aligned_cols=191 Identities=10% Similarity=0.003 Sum_probs=123.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.....-..++.++++|++|++++.++++ +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-----LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998 555543322224688999999999999988876 7
Q ss_pred CCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh----CC-Cceeec-CCCCCCcccccccCCCCCch
Q 021470 76 VDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA----GN-VKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~----~~-v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
+|++||+++..... +.|+.+..++++++... +. -.++|+ |+...... ..+...|
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y 177 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----RPYSAPY 177 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----CTTCHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----CCCchHH
Confidence 99999999974321 15677766666665543 20 146665 44332211 1222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .++++..++||.+........... ... .........+.+++|+|++++.++
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~--~~~~~~~~~~~~pedvA~~v~fL~ 248 (272)
T 4dyv_A 178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-------VPQ--ADLSIKVEPVMDVAHVASAVVYMA 248 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-------chh--hhhcccccCCCCHHHHHHHHHHHh
Confidence 5599998887653 478889999998876543322111 000 000112235789999999999999
Q ss_pred cCCcc
Q 021470 208 NDPRT 212 (312)
Q Consensus 208 ~~~~~ 212 (312)
..+..
T Consensus 249 s~~~~ 253 (272)
T 4dyv_A 249 SLPLD 253 (272)
T ss_dssp HSCTT
T ss_pred CCCCc
Confidence 97753
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9e-18 Score=139.16 Aligned_cols=198 Identities=13% Similarity=0.053 Sum_probs=133.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+. .++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASS----AGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCC----hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999853 322221 12222 3468889999999999888776
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.++.++++++. +.+ ..++|+ |+..... +......
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 177 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEM-----GNPGQAN 177 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHH-----CCTTCHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC-----CCCCchh
Confidence 789999999976421 157777777777763 345 457775 5432111 1112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|+++..++||.+........... ..........+.+.+|+|++++.+
T Consensus 178 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----------~~~~~~p~~r~~~~~dvA~~v~~l 246 (269)
T 4dmm_A 178 YSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAE-----------KLLEVIPLGRYGEAAEVAGVVRFL 246 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHH-----------HHGGGCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHH-----------HHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55599988777653 579999999998876543221100 000011123467899999999999
Q ss_pred hcCCc---cCCceEEecC
Q 021470 207 INDPR---TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~---~~~~~~~~~~ 221 (312)
+.++. ..|+.+++.|
T Consensus 247 ~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 247 AADPAAAYITGQVINIDG 264 (269)
T ss_dssp HHCGGGGGCCSCEEEEST
T ss_pred hCCcccCCCcCCEEEECC
Confidence 98743 2367777764
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-17 Score=130.83 Aligned_cols=181 Identities=15% Similarity=0.165 Sum_probs=128.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ...++.++++|++|++++.++++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARS-----VDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 222 24578899999999999998876
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.+..++++++.. .+ -..++. |+.+.... ....
T Consensus 77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~------~~~~ 149 (235)
T 3l77_A 77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG-GLALVTTSDVSARLI------PYGG 149 (235)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSCC------TTCH
T ss_pred hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEecchhcccC------CCcc
Confidence 689999999975421 1677777777777754 23 233444 33332211 1123
Q ss_pred chhhhHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 133 VTFDDKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.|..+|..++.+.+. .++++..++||.+...+...... ......+.+.+|+|++++.++
T Consensus 150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~----------------~~~~~~~~~p~dva~~v~~l~ 213 (235)
T 3l77_A 150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG----------------KPKEKGYLKPDEIAEAVRCLL 213 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC----------------CCGGGTCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC----------------cccccCCCCHHHHHHHHHHHH
Confidence 455599998887764 47889999999876544322111 011125678999999999999
Q ss_pred cCCc
Q 021470 208 NDPR 211 (312)
Q Consensus 208 ~~~~ 211 (312)
..+.
T Consensus 214 ~~~~ 217 (235)
T 3l77_A 214 KLPK 217 (235)
T ss_dssp TSCT
T ss_pred cCCC
Confidence 8875
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=139.89 Aligned_cols=199 Identities=16% Similarity=0.054 Sum_probs=127.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|.+++.++++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVD-----QPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999999998 5444322 2332 3468899999999999888876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+..++++++.. .+...++|+ ||...... ..+...
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~ 180 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-----NAGLGT 180 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-----CTTBHH
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----CCCchH
Confidence 789999999975321 1677777777777643 331246665 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC--ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. .|+++..++||.+..++........ .......+...++.......+++++|+|++++
T Consensus 181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~ 260 (301)
T 3tjr_A 181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTA 260 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHH
Confidence 55599988777653 4788999999998765432211000 00001111111222233456899999999999
Q ss_pred HHhcCCc
Q 021470 205 KAINDPR 211 (312)
Q Consensus 205 ~~l~~~~ 211 (312)
.++..++
T Consensus 261 ~~l~~~~ 267 (301)
T 3tjr_A 261 DAILANR 267 (301)
T ss_dssp HHHHHTC
T ss_pred HHHhcCC
Confidence 9998764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=144.66 Aligned_cols=223 Identities=11% Similarity=0.025 Sum_probs=144.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC-------CCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE-------IGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~ 73 (312)
.++++||||+|+||+++++.|+++|++|++++|+. ... .......+.+. ...+.++++|++|++++.+++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGG-SAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTT-SHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 46899999999999999999999999999998861 101 11111223332 345788899999999988877
Q ss_pred c-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCCC----------ceeec-CCCCCCc
Q 021470 74 K-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGNV----------KRFLP-SEFGTDP 121 (312)
Q Consensus 74 ~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v----------~~~v~-S~~g~~~ 121 (312)
+ ++|++||+++..... +.|+.+..++++++...- . .++|+ ||.....
T Consensus 106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYW-RGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-HHccccCCCCCcEEEEEcCHHHcc
Confidence 6 789999999975421 167777777877775431 1 36665 5422111
Q ss_pred ccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeee
Q 021470 122 AKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYV 194 (312)
Q Consensus 122 ~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 194 (312)
+..+...|..+|..++.+.+. .|+++..+.|| +........... . .........+.
T Consensus 185 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~----~-------~~~~~~~~~~~ 247 (322)
T 3qlj_A 185 -----GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE----M-------MATQDQDFDAM 247 (322)
T ss_dssp -----CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------------CCTT
T ss_pred -----CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh----h-------hhccccccCCC
Confidence 111123455599998877653 57889999999 543322211110 0 00111223456
Q ss_pred eHHHHHHHHHHHhcCCc--cCCceEEecCCC----------------CcCCHHHHHHHHHHHhCCcce
Q 021470 195 DEDDIAMYTMKAINDPR--TLNRTMYLRPPK----------------NILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~~~--~~~~~~~~~~~~----------------~~~s~~e~~~~~~~~~g~~~~ 244 (312)
+++|+|++++.++.... ..|+.+++.|.. ...+..|+++.+.+.+|.+.+
T Consensus 248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 89999999999987643 246677775432 123779999999999986543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.8e-17 Score=132.35 Aligned_cols=183 Identities=14% Similarity=0.135 Sum_probs=123.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC----CE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV----DV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~----d~ 78 (312)
|++++||||+|+||+++++.|+++|++|++++|+ +++.+.....-..++.++.+|++|.+++.++++.+ |+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRS-----ESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 4789999999999999999999999999999998 55554333222567899999999999999998754 89
Q ss_pred EEEcCCCCccc--------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 79 VICAISGVHIR--------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 79 v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
+||+++..... +.|+.+..++++++...- .-.++|+ |+...... ..+...|..+|..+
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~~Y~asKaa~ 150 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-----KAQESTYCAVKWAV 150 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-----CTTCHHHHHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-----CCCCchhHHHHHHH
Confidence 99999965421 267777888888776542 0126664 44322111 12223455599998
Q ss_pred HHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 142 RKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 142 e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+.+.+. .++++..+.||.+...+...... . .....+.+++|+|++++.++.++.
T Consensus 151 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~-------~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 151 KGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGK---------S-------LDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC---------C-------CCcccCCCHHHHHHHHHHHHhCcC
Confidence 887663 37888999999876554322110 0 112367899999999999987653
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=137.30 Aligned_cols=205 Identities=12% Similarity=0.001 Sum_probs=133.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCH-HHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDY-QSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~-~~l~~~~~---- 74 (312)
+.++++||||+|+||++++++|+++|++ |++++|+.. .+..+.+... ...++.++.+|++|+ +++.++++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN---PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC---HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch---HHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 3578999999999999999999999996 999999742 1222222222 134678899999997 77777665
Q ss_pred ---cCCEEEEcCCCCccc------cchhHhHHHHHHHHHHhCC------Cceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 75 ---LVDVVICAISGVHIR------SHQILLQLKLVDAIKEAGN------VKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~------~~~~~~~~~l~~aa~~~~~------v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
++|++||+++..... +.|+.++.++++++...-. ..++|+ ||...... ..+...|..+|
T Consensus 81 ~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~~sK 155 (254)
T 1sby_A 81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----IHQVPVYSASK 155 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTSHHHHHHH
T ss_pred hcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-----CCCchHHHHHH
Confidence 789999999975432 2678888888888875320 135665 54332211 11223455599
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .++++++++||.+..+......... .......... ...++.+++|+|++++.++...
T Consensus 156 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~dvA~~i~~~~~~~- 228 (254)
T 1sby_A 156 AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELL----LSHPTQTSEQCGQNFVKAIEAN- 228 (254)
T ss_dssp HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHH----TTSCCEEHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhh--hhhHHHHHHH----hcCCCCCHHHHHHHHHHHHHcC-
Confidence 998877653 5899999999998776543221100 0000000000 1124558999999999988743
Q ss_pred cCCceEEecC
Q 021470 212 TLNRTMYLRP 221 (312)
Q Consensus 212 ~~~~~~~~~~ 221 (312)
..|+.+++.|
T Consensus 229 ~~G~~~~v~g 238 (254)
T 1sby_A 229 KNGAIWKLDL 238 (254)
T ss_dssp CTTCEEEEET
T ss_pred CCCCEEEEeC
Confidence 3467777764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.7e-18 Score=139.91 Aligned_cols=204 Identities=9% Similarity=0.025 Sum_probs=134.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL------- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~------- 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ....+..... ..++.++++|++|++++.++++.
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPAD-EKAEHLQKTY-GVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCH-HHHHHHHHHH-CSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhc-CCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999985432 1111111111 34688999999999998888763
Q ss_pred CCEEEEcCCCCcc------c----------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 76 VDVVICAISGVHI------R----------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~------~----------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
+|+|||+++.... . ..|+.+ ++++++++++.+ ..++|+ |+....... +..+...|
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---~~~~~~~Y 187 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN---IPQLQAPY 187 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC------CCHHHH
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC---CCCCcccH
Confidence 8999999986432 1 145555 567888888777 788876 543322110 01222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .+ ++..++||.+..+....... .....+........+++++|+|++++.++
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~~p~~~~~~~~dvA~~~~~l~ 258 (279)
T 3ctm_A 188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK--------DMKAKWWQLTPLGREGLTQELVGGYLYLA 258 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH--------HHHHHHHHHSTTCSCBCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh--------HHHHHHHHhCCccCCcCHHHHHHHHHHHh
Confidence 5599999888764 35 78889999887664321100 00000000011124789999999999999
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
..+. ..|+.+++.|
T Consensus 259 s~~~~~~tG~~i~vdg 274 (279)
T 3ctm_A 259 SNASTFTTGSDVVIDG 274 (279)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CccccCccCCEEEECC
Confidence 7643 3467777764
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-17 Score=136.74 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=131.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+. .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSN----AEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999999963 2222211 2222 3478899999999998888876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..++++++ ++.+ ..++|+ |+.... .+..+...
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~-----~~~~~~~~ 178 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGE-----RGNMGQTN 178 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHH-----HCCTTCHH
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhc-----CCCCCchH
Confidence 789999999975432 15666666655555 3445 567775 542211 11122344
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... .............+.+++|+|+++..+
T Consensus 179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE--------LKADYVKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH--------HHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 55599998877653 478888999998876543322110 001111112234578999999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+.+++.|
T Consensus 251 ~s~~~~~itG~~i~vdG 267 (271)
T 4iin_A 251 LSDHSSYITGETLKVNG 267 (271)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCCcCCCcCCEEEeCC
Confidence 97653 3467777754
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.4e-18 Score=141.44 Aligned_cols=192 Identities=15% Similarity=0.162 Sum_probs=127.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc----CCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE----QGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~----~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.+ +.+.. ..+.++++|++|++++.++++
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC-----hHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 5444322 22222 346789999999999888776
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHh----HHHHHHHHHHhCCC--ceeec-CCCCCCcccccccCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILL----QLKLVDAIKEAGNV--KRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v--~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|+|||+++..... ..|+.+ ++++++++++.+ + .++|+ |+...... .+..
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~---~~~~ 182 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRV---LPLS 182 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSC---CSCG
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhccc---CCCC
Confidence 799999999864321 145555 677888888776 5 67775 54332210 1111
Q ss_pred CCCchhhhHHHHHHHHH---------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIE---------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~---------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
+...|..+|..++.+.+ ..+++++.++||.+..++....... ....... ......+++++|+|
T Consensus 183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~dvA 254 (279)
T 1xg5_A 183 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK-------DPEKAAA-TYEQMKCLKPEDVA 254 (279)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT-------CHHHHHH-HHC---CBCHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc-------ChhHHhh-hcccccCCCHHHHH
Confidence 22345559999876654 2468899999998876542211110 0000000 01123468999999
Q ss_pred HHHHHHhcCCc
Q 021470 201 MYTMKAINDPR 211 (312)
Q Consensus 201 ~~~~~~l~~~~ 211 (312)
++++.++..+.
T Consensus 255 ~~i~~l~~~~~ 265 (279)
T 1xg5_A 255 EAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHSCT
T ss_pred HHHHHHhcCCc
Confidence 99999998764
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=137.92 Aligned_cols=205 Identities=10% Similarity=-0.002 Sum_probs=135.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARN-----GNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999999998 5444322 2232 3467889999999998888776
Q ss_pred -cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . +.|+.++.++++++.. .+ ..++|+ |+...... +..+...
T Consensus 84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~----~~~~~~~ 158 (280)
T 3tox_A 84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTA----GFAGVAP 158 (280)
T ss_dssp SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTB----CCTTCHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcC----CCCCchh
Confidence 68999999996421 0 1677777777777654 33 356665 44332101 1122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... .................+.+++|+|++++.+
T Consensus 159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 234 (280)
T 3tox_A 159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPG----AAPETRGFVEGLHALKRIARPEEIAEAALYL 234 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTT----CCTHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccc----cCHHHHHHHhccCccCCCcCHHHHHHHHHHH
Confidence 55599998877653 478899999998876543221100 0000000111112223577899999999999
Q ss_pred hcCCc--cCCceEEecCC
Q 021470 207 INDPR--TLNRTMYLRPP 222 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~~ 222 (312)
+.++. ..|+.+++.|.
T Consensus 235 ~s~~a~~itG~~i~vdGG 252 (280)
T 3tox_A 235 ASDGASFVTGAALLADGG 252 (280)
T ss_dssp HSGGGTTCCSCEEEESTT
T ss_pred hCccccCCcCcEEEECCC
Confidence 98653 24677888643
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=138.05 Aligned_cols=208 Identities=11% Similarity=0.084 Sum_probs=137.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD-----AKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544432 22332 3468899999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH------hCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE------AGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~------~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ..|+.++.++++++.. .+ ..++|+ |+...... ..+.
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~-----~~~~ 172 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQG-----VMYA 172 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSC-----CTTC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccC-----CCCC
Confidence 689999999975421 1677888888887754 44 467775 54332211 1122
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCC--C-CCeeEEeCCCCcceeeeeHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILP--S-KDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
..|..+|..++.+.+. .++++..++||.+................ . ......+........+.+++|+|+
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 252 (279)
T 3sju_A 173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAG 252 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 3455599988877653 57889999999987654322110000000 0 000001111222335678999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++.++.... ..|+.+++.|
T Consensus 253 ~v~~L~s~~a~~itG~~i~vdG 274 (279)
T 3sju_A 253 LVGYLVTDAAASITAQALNVCG 274 (279)
T ss_dssp HHHHHTSSGGGGCCSCEEEEST
T ss_pred HHHHHhCccccCcCCcEEEECC
Confidence 9999988653 3467777764
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.8e-18 Score=139.04 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=134.7
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK- 74 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~- 74 (312)
|+ .++++||||+|+||+++++.|+++|++|+++ .|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARS-----KKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 44 5789999999999999999999999999997 666 4443222 2222 3468899999999999888775
Q ss_pred ------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCC
Q 021470 75 ------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++..... +.|+.++.++++++. +.+ ..++|+ ||...... ..
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~ 149 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRY-----LE 149 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSB-----CT
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCC-----CC
Confidence 569999999864321 257777777777774 444 457775 44332211 12
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
+...|..+|..++.+.+. .++++..++||.+............ ..............+.+++|+|++
T Consensus 150 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~r~~~~~dva~~ 223 (258)
T 3oid_A 150 NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE------DLLEDARQNTPAGRMVEIKDMVDT 223 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH------HHHHHHHHHCTTSSCBCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH------HHHHHHHhcCCCCCCcCHHHHHHH
Confidence 223455599998887763 4788899999988766543221100 000000001112357789999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++.++. ..|+.+++.|
T Consensus 224 v~~L~s~~~~~itG~~i~vdG 244 (258)
T 3oid_A 224 VEFLVSSKADMIRGQTIIVDG 244 (258)
T ss_dssp HHHHTSSTTTTCCSCEEEEST
T ss_pred HHHHhCcccCCccCCEEEECC
Confidence 999998653 2467777764
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-17 Score=137.42 Aligned_cols=204 Identities=13% Similarity=0.056 Sum_probs=135.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh--ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF--KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l--~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+.. ..+.+.. +.+ ...++.++++|++|++++.++++
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAE---EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGG---HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc---hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999988622 1122111 111 13568889999999988887765
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhCCCc--eeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAGNVK--RFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~~v~--~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++.... . +.|+.++.++++++...- .+ ++|+ |+...... ..+...|
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~-----~~~~~~Y 199 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQP-----SPHLLDY 199 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSC-----CTTCHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccC-----CCCchHH
Confidence 68999999996431 1 167888899999988764 33 6665 54332211 1122345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++..++||.+............ .....+........+...+|+|++++.++
T Consensus 200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~p~~r~~~p~dvA~~v~~L~ 273 (294)
T 3r3s_A 200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ------DKIPQFGQQTPMKRAGQPAELAPVYVYLA 273 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG------GGSTTTTTTSTTSSCBCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH------HHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 5599998877653 4899999999998875421110000 00000111122235678999999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|+++++.|
T Consensus 274 s~~~~~itG~~i~vdG 289 (294)
T 3r3s_A 274 SQESSYVTAEVHGVCG 289 (294)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CccccCCCCCEEEECC
Confidence 7653 2467778864
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-16 Score=133.60 Aligned_cols=209 Identities=13% Similarity=0.063 Sum_probs=136.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|++.|++|++++|+ .++.+.. +.+. ...+.++++|++|++++.++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRT-----RTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 5444322 2332 3467889999999998888776
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+..++++++ ++.+ ..++|+ |+....... +..+..
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~---~~~~~~ 178 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTF---TTPGAT 178 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC---CSTTCH
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCC---CCCCch
Confidence 68999999996431 0 26777777888777 5556 567775 543322110 112223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc--eeeeeHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK--AIYVDEDDIAMYT 203 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~D~a~~~ 203 (312)
.|..+|..++.+.+. .++++..++||.+.............. ............... ..+...+|+|+++
T Consensus 179 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~r~~~pedvA~~v 257 (283)
T 3v8b_A 179 AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEE-ETAIPVEWPKGQVPITDGQPGRSEDVAELI 257 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHH-HHSCCCBCTTCSCGGGTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccch-hhhhhhhhhhhcCccccCCCCCHHHHHHHH
Confidence 455599998877763 467888999999876544322110000 000000001111111 2457899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++.... ..|+.+++.|
T Consensus 258 ~fL~s~~a~~itG~~i~vdG 277 (283)
T 3v8b_A 258 RFLVSERARHVTGSPVWIDG 277 (283)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHcCccccCCcCCEEEECc
Confidence 99987643 2367777753
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-17 Score=135.63 Aligned_cols=202 Identities=15% Similarity=0.112 Sum_probs=132.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhh--ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSF--KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l--~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|+++.|+. .++.. ....+ ...++.++++|++|.+++.++++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER----NDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSC----HHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999998553 22222 11222 23578999999999998888776
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... ..|+.+..++++++.. .+ ..++|+ |+..... +..+...
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 174 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSR-----GAFGQAN 174 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-----CCTTBHH
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhcc-----CCCCcch
Confidence 789999999975421 1567777777766543 45 567775 5432111 1112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+............ ... ..........+.+++|+|++++.+
T Consensus 175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~----~~~---~~~~~~~~~~~~~p~dvA~~v~~L 247 (269)
T 3gk3_A 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDV----LEA---KILPQIPVGRLGRPDEVAALIAFL 247 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------C---CSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhH----HHH---HhhhcCCcCCccCHHHHHHHHHHH
Confidence 55599988777653 4788999999988765443221110 000 011111223567899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+.+++.|
T Consensus 248 ~s~~~~~itG~~i~vdg 264 (269)
T 3gk3_A 248 CSDDAGFVTGADLAING 264 (269)
T ss_dssp TSTTCTTCCSCEEEEST
T ss_pred hCCCcCCeeCcEEEECC
Confidence 97653 3467788864
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=136.45 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=128.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
+++++||||+|+||+++++.|+++|++|+++.++. .++.+.. +.+. ..++.++++|++|.+++.++++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAAN----REAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999998874432 3333221 2222 3468899999999998888776
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhC------CCceeec-CCCCCCcccccccCCC
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAG------NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~------~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . ..|+.++.++++++...- ...++|+ |+....... ...
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~ 177 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS----ATQ 177 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC----TTT
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC----CCC
Confidence 68999999997542 1 167777888888776541 1345665 543221111 001
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+........... ..............+.+++|+|+++
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~edvA~~i 250 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP-------DRAREMAPSVPMQRAGMPEEVADAI 250 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------------CCTTSSCBCHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh-------HHHHHHhhcCCcCCCcCHHHHHHHH
Confidence 13355599998877653 378899999999877643321110 0000111112223466899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+++.|
T Consensus 251 ~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 251 LYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCCccccccCCEEeecC
Confidence 99997643 2367777753
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-17 Score=138.53 Aligned_cols=213 Identities=13% Similarity=0.080 Sum_probs=137.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCC-------ChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-------DIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ..++.. ..+.+. ..++.++++|++|++++.++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 47899999999999999999999999999999974321 022221 112221 35688999999999998888
Q ss_pred hc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccc
Q 021470 73 VK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++ ++|++||+++..... +.|+.++.++++++ ++.+ ..++|+ ||.....
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~----- 163 (281)
T 3s55_A 90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHS----- 163 (281)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS-----
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcC-----
Confidence 76 789999999975421 16777777777775 3445 567775 5432211
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCC--CCccCCCCCee-----EEeCCCCccee
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ--PGSILPSKDSV-----VLLGDGNPKAI 192 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~ 192 (312)
+..+...|..+|..++.+.+. .|+++..++||.+..+....... ........... .+.........
T Consensus 164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (281)
T 3s55_A 164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAP 243 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCS
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcC
Confidence 112223455599998877653 47889999999987764431000 00000000000 00011122257
Q ss_pred eeeHHHHHHHHHHHhcCCcc--CCceEEecC
Q 021470 193 YVDEDDIAMYTMKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~~~--~~~~~~~~~ 221 (312)
+.+++|+|++++.++..+.. .|+.+++.|
T Consensus 244 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg 274 (281)
T 3s55_A 244 FLKPEEVTRAVLFLVDEASSHITGTVLPIDA 274 (281)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence 88999999999999987542 367788864
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=139.81 Aligned_cols=203 Identities=13% Similarity=0.071 Sum_probs=136.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh--ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF--KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l--~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+... ..+.. +.+ ...++.++++|++|++++.++++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG----DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH----HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998421 11111 112 23468889999999998888775
Q ss_pred --cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++...- .-.++|+ |+..... +..+...|.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~ 197 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----GNETLIDYS 197 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----CCTTCHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----CCCCChhHH
Confidence 689999999864311 167888899999988652 0236665 4432211 111223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++..++||.+........... .....+........+.+++|+|++++.++.
T Consensus 198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s 270 (291)
T 3ijr_A 198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE-------KKVSQFGSNVPMQRPGQPYELAPAYVYLAS 270 (291)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH-------HHHHHTTTTSTTSSCBCGGGTHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH-------HHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence 599998877653 489999999999876643221110 000011112223456789999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+++.|
T Consensus 271 ~~~~~itG~~i~vdG 285 (291)
T 3ijr_A 271 SDSSYVTGQMIHVNG 285 (291)
T ss_dssp GGGTTCCSCEEEESS
T ss_pred CccCCCcCCEEEECC
Confidence 653 2467777754
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=135.03 Aligned_cols=209 Identities=12% Similarity=0.070 Sum_probs=132.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999998 5444321 2232 3457889999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.++.++++++.. .+...++|+ |+....... .+...
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~ 151 (256)
T 1geg_A 77 LGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PELAV 151 (256)
T ss_dssp TTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTBHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----CCchh
Confidence 799999999864321 1566666666655543 331356665 543221111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCC---CCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ---PGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
|..+|..++.+.+. .+++++.++||.+..++...... .............+........+.+++|+|+++
T Consensus 152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 231 (256)
T 1geg_A 152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV 231 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 55599998877653 47889999999987764322100 000000000000000111122478999999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+.+.|
T Consensus 232 ~~l~s~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 232 SYLASPDSDYMTGQSLLIDG 251 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHhCccccCCCCCEEEeCC
Confidence 99997653 2467777754
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.75 E-value=4.6e-18 Score=139.81 Aligned_cols=212 Identities=12% Similarity=0.019 Sum_probs=137.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
++++||||+|+||+++++.|+++|++|++++|+ +++.+........++.++++|++|++++.++++ ++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN-----ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999998 555543322224578999999999988887664 68
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
|++||+++..... +.|+.+..++++++...- .-.++|+ ||...... ..+...|..+|..
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~Y~asKaa 158 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-----HPGMSVYSASKAA 158 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-----CTTBHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-----CCCchHHHHHHHH
Confidence 9999999875421 167778888888887641 0135664 54332211 1122345559999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc-
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT- 212 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~- 212 (312)
++.+.+. .|+++..++||.+............. .................+.+++|+|++++.++.....
T Consensus 159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~i 236 (255)
T 4eso_A 159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEA--ERAEFKTLGDNITPMKRNGTADEVARAVLFLAFEATFT 236 (255)
T ss_dssp HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHH--HHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChh--hHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCcCcCc
Confidence 8877653 47899999999887654321100000 0000000000011123466899999999999876332
Q ss_pred CCceEEecCCCCcCCH
Q 021470 213 LNRTMYLRPPKNILSQ 228 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~ 228 (312)
.|+.+++.| +...++
T Consensus 237 tG~~i~vdG-G~~~~l 251 (255)
T 4eso_A 237 TGAKLAVDG-GLGQKL 251 (255)
T ss_dssp CSCEEEEST-TTTTTB
T ss_pred cCCEEEECC-CccccC
Confidence 367777764 334443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.5e-17 Score=134.27 Aligned_cols=208 Identities=13% Similarity=0.109 Sum_probs=134.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHH--HH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEK--VQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++ .+ ..+.+. ..++.++++|++|++++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLP-----QQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAA 76 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG-----GGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----cchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999997 333 22 222232 3468889999999999888776
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCC-ceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNV-KRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v-~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... ..|+.+..++++++.. .+ . .++|+ |+...... ..+
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~-----~~~ 150 (258)
T 3a28_C 77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQG-----FPI 150 (258)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSC-----CTT
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccC-----CCC
Confidence 799999999965321 1566677777776654 35 5 67775 55332211 112
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC-cc-CCC-CCeeEEeCCCCcceeeeeHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG-SI-LPS-KDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
...|..+|..++.+.+. .++++.+++||.+..++........ .. ... ......+........+.+++|+|
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 230 (258)
T 3a28_C 151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVA 230 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHH
Confidence 23455599998877653 4799999999998765432210000 00 000 00000000111112478999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++..+. ..|+.+.+.|
T Consensus 231 ~~v~~l~s~~~~~~tG~~i~vdG 253 (258)
T 3a28_C 231 GLVSFLASENSNYVTGQVMLVDG 253 (258)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESS
T ss_pred HHHHHHhCcccCCCCCCEEEECC
Confidence 99999997653 2466777764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=140.17 Aligned_cols=225 Identities=11% Similarity=0.098 Sum_probs=142.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc--C---CCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE--Q---GAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~--~---~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+.. . ++.++++|++|++++.++++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 22222 2 57899999999999888776
Q ss_pred -----cCCEEEEcCCCCccc----------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHIR----------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.+..++++++...- .-.++|+ |+...... ..|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~ 175 (297)
T 1xhl_A 101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----AHS 175 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----CCT
T ss_pred HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccC-----CCC
Confidence 689999999854311 156667777777766531 0146765 54322111 102
Q ss_pred CC-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC-CCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 131 GR-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL-PSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 131 ~~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
.. .|..+|..++.+.+. .|+++++++||.+..++........... .................+.+++|+|+
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 255 (297)
T 1xhl_A 176 GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIAN 255 (297)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 23 444499998877653 5899999999998776433211000000 00000000000011224789999999
Q ss_pred HHHHHhcCC---ccCCceEEecCCCCcCCHHHHHHHHHHH
Q 021470 202 YTMKAINDP---RTLNRTMYLRPPKNILSQREVVETWEKL 238 (312)
Q Consensus 202 ~~~~~l~~~---~~~~~~~~~~~~~~~~s~~e~~~~~~~~ 238 (312)
+++.++..+ ...|+.+.+.|. ..+.+.+.+..+.++
T Consensus 256 ~v~~l~s~~~~~~itG~~i~vdGG-~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 256 IIVFLADRNLSSYIIGQSIVADGG-STLVMGMQTHDLMSV 294 (297)
T ss_dssp HHHHHHCHHHHTTCCSCEEEESTT-GGGCCGGGGSCHHHH
T ss_pred HHHHHhCCcccCCccCcEEEECCC-ccccccccccchhhh
Confidence 999998764 234677777653 366666655555544
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=137.90 Aligned_cols=199 Identities=8% Similarity=0.048 Sum_probs=132.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+... ..++.++++|++|++++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999997421 3468899999999999888876 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++.. .+ ..++|+ |+...... ..+...|..
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~ 148 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASII-----TKNASAYVT 148 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSC-----CTTBHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccC-----CCCchhHHH
Confidence 99999999965321 1577777777777654 34 567775 55332211 122234555
Q ss_pred hHHHHHHHHHH----hC--CCeEEEecccccccccccCCCCCccCCCC----CeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 DKMVVRKAIED----AG--IPFTYVSANCFAGYFLGGLCQPGSILPSK----DSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 ~K~~~e~~~~~----~~--~~~~i~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+. .+ +++++++||.+..++......... .... .....+........+++++|+|++++.+
T Consensus 149 sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 227 (264)
T 2dtx_A 149 SKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEV-GSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFL 227 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHH-CSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhccc-ccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99998887764 22 788899999987654322100000 0000 0000000001123578999999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+.+.+.|
T Consensus 228 ~s~~~~~~tG~~i~vdG 244 (264)
T 2dtx_A 228 ASREASFITGTCLYVDG 244 (264)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhcCCCCcEEEECC
Confidence 97653 2466777754
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-17 Score=138.62 Aligned_cols=197 Identities=11% Similarity=0.069 Sum_probs=122.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--c--CCCeEEEccCCCHHHHHHHhc----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--E--QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~--~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
++|+||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. . ..+.++++|++|++++.++++
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR-----QDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999999999999998 5544322 2222 1 268899999999999888876
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC---------CCceeec-CCCCCCccccccc
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG---------NVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~---------~v~~~v~-S~~g~~~~~~~~~ 127 (312)
++|++||+++..... ..|+.++.++++++.... .-.++|+ ||.......
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~---- 159 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA---- 159 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC----
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC----
Confidence 579999999964321 167777888777776542 0234665 554332211
Q ss_pred CCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe----eEEeCC-CCcceeeee
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS----VVLLGD-GNPKAIYVD 195 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~v~ 195 (312)
.....|..+|..++.+.+. .++.++.++||.+..++.......... ..... ...... .......++
T Consensus 160 -~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (319)
T 3ioy_A 160 -GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDA-LKGEVKPVDKTAVERLAGVHEFGME 237 (319)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchh-hcccccchhHHHHHHHHHhhhcCCC
Confidence 1123455599976655442 589999999999876654321110000 00000 000000 011112379
Q ss_pred HHHHHHHHHHHhcCCc
Q 021470 196 EDDIAMYTMKAINDPR 211 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~ 211 (312)
++|+|+.++.+++.++
T Consensus 238 pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 238 PDVIGARVIEAMKANR 253 (319)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999998864
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=136.41 Aligned_cols=200 Identities=9% Similarity=0.115 Sum_probs=132.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhcc-CCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKE-QGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+.. .++.++++|++|++++.++++
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARD-----AEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999998 544432 222321 267888999999998888775
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCC----ceeec-CCCCCCcccccccCCC
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNV----KRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v----~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.++.++++++. +.+ . .++|+ |+....... ..
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~-----~~ 177 (276)
T 2b4q_A 104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAM-----GE 177 (276)
T ss_dssp SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCC-----CC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCC-----CC
Confidence 689999999864321 156666666555543 445 3 67775 543322111 11
Q ss_pred CC-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC--CCcceeeeeHHHHH
Q 021470 131 GR-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD--GNPKAIYVDEDDIA 200 (312)
Q Consensus 131 ~~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~D~a 200 (312)
.. .|..+|..++.+.+. .++++++++||.+..++....... . . .. ... ......+.+++|+|
T Consensus 178 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~--~--~~---~~~~~~~p~~r~~~p~dvA 249 (276)
T 2b4q_A 178 QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-P--Q--AL---EADSASIPMGRWGRPEEMA 249 (276)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-H--H--HH---HHHHHTSTTSSCCCHHHHH
T ss_pred CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-H--H--HH---HHhhcCCCCCCcCCHHHHH
Confidence 23 566699998887753 478899999999876543221000 0 0 00 000 01112477999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++..+. ..|+.+.+.|
T Consensus 250 ~~v~~l~s~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 250 ALAISLAGTAGAYMTGNVIPIDG 272 (276)
T ss_dssp HHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCccccCCCCCEEEeCC
Confidence 99999997653 2467777754
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=7e-18 Score=139.30 Aligned_cols=205 Identities=12% Similarity=0.091 Sum_probs=133.7
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+ |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++.++++|++|++++.++++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-L-RPEAEKLAEA-LGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-G-HHHHHHHHHH-TTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-H-HHHHHHHHHh-cCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999 99999999999999999999999842 1 1122211111 1348899999999999888776
Q ss_pred -cCCEEEEcCCCCcc----------c--------cchhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI----------R--------SHQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~----------~--------~~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . +.|+.++.++++++...-. -.++|+ |+.+.... ..+...
T Consensus 85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~ 159 (261)
T 2wyu_A 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----VPKYNV 159 (261)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----CTTCHH
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----CCCchH
Confidence 68999999986431 0 1677888899998876520 136665 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+............ .....+........+.+++|+|++++.+
T Consensus 160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~p~~~~~~~~dva~~v~~l 233 (261)
T 2wyu_A 160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT------KMYDRVAQTAPLRRNITQEEVGNLGLFL 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHH------HHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccH------HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55599998877653 3899999999998765432211000 0000000001112467899999999999
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..+.. .|+.+++.|
T Consensus 234 ~s~~~~~~tG~~~~vdg 250 (261)
T 2wyu_A 234 LSPLASGITGEVVYVDA 250 (261)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred cChhhcCCCCCEEEECC
Confidence 875432 367777764
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=136.04 Aligned_cols=200 Identities=11% Similarity=0.033 Sum_probs=135.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ..++.++++|++|++++.++++
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999998 5554322 223 2568899999999998888775
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
++|++||+++..... ..|+.++.++++++...- ...++|+ |+....... +...|..+|
T Consensus 80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------~~~~Y~asK 153 (263)
T 2a4k_A 80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------GLAHYAAGK 153 (263)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH------HHHHHHHCS
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC------CcHHHHHHH
Confidence 479999999865321 167888888888887652 0246665 543332111 113455588
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .|+++++++||.+..+........ .............+.+.+|+|++++.++..+.
T Consensus 154 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~ 225 (263)
T 2a4k_A 154 LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW--------AWEQEVGASPLGRAGRPEEVAQAALFLLSEES 225 (263)
T ss_dssp SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH--------HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 877766553 478999999999877654321100 00000000111246799999999999997653
Q ss_pred --cCCceEEecCC
Q 021470 212 --TLNRTMYLRPP 222 (312)
Q Consensus 212 --~~~~~~~~~~~ 222 (312)
..|+.+.+.|.
T Consensus 226 ~~~tG~~i~vdgG 238 (263)
T 2a4k_A 226 AYITGQALYVDGG 238 (263)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCCcCCEEEECCC
Confidence 24677777643
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=137.40 Aligned_cols=202 Identities=10% Similarity=0.084 Sum_probs=134.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ ....+..+.+. ..++.++++|++|.+++.++.+
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-----DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-----HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999976 22222223332 3457889999999988877654
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.++.++++++ ++.+ ..++|+ |+...... ..+...|.
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~-----~~~~~~Y~ 179 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQG-----GRNVAAYA 179 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CSSCHHHH
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCC-----CCCChhHH
Confidence 799999999975421 15777777777766 4455 567775 54332211 12223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..++||.+............ ..............+.+++|+|++++.++.
T Consensus 180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~r~~~pedva~~v~~L~s 253 (273)
T 3uf0_A 180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADD------ERAAEITARIPAGRWATPEDMVGPAVFLAS 253 (273)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH------HHHHHHHHHSTTSSCBCGGGGHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCH------HHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 599998877653 5788999999998765432211000 000000001112346789999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+++.|
T Consensus 254 ~~a~~itG~~i~vdG 268 (273)
T 3uf0_A 254 DAASYVHGQVLAVDG 268 (273)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred chhcCCcCCEEEECc
Confidence 643 2467777764
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.5e-17 Score=137.18 Aligned_cols=199 Identities=15% Similarity=0.058 Sum_probs=132.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC-CCCCCChHHHHHh-hhhc---cCCCeEEEccCCCH----HHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR-PEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDY----QSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~----~~l~~~~ 73 (312)
.++++||||+|+||+++++.|+++|++|++++| + +++.+.. +.+. ..++.++++|++|+ +++.+++
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS-----EGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC-----hHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence 468999999999999999999999999999999 6 4443221 2222 34688999999999 8888877
Q ss_pred c-------cCCEEEEcCCCCccc-------------------------cchhHhHHHHHHHHHHh---CCC------cee
Q 021470 74 K-------LVDVVICAISGVHIR-------------------------SHQILLQLKLVDAIKEA---GNV------KRF 112 (312)
Q Consensus 74 ~-------~~d~v~~~~~~~~~~-------------------------~~~~~~~~~l~~aa~~~---~~v------~~~ 112 (312)
+ ++|++||+++..... ..|+.++.++++++... + . .++
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~g~i 164 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG-GAWRSRNLSV 164 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCCCCCcEE
Confidence 5 789999999864311 15677788888888773 3 3 577
Q ss_pred ec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEe
Q 021470 113 LP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLL 184 (312)
Q Consensus 113 v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (312)
|+ |+..... +..+...|..+|..++.+.+. .++++..++||.+..+ ..... .. . .. ..
T Consensus 165 v~isS~~~~~-----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~-~~--~--~~--~~ 230 (276)
T 1mxh_A 165 VNLCDAMTDL-----PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAMPQ-ET--Q--EE--YR 230 (276)
T ss_dssp EEECCGGGGS-----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSSCH-HH--H--HH--HH
T ss_pred EEECchhhcC-----CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccCCH-HH--H--HH--HH
Confidence 75 5433211 111223455599998877653 3789999999998765 11100 00 0 00 00
Q ss_pred CCCCcceeeeeHHHHHHHHHHHhcCCcc--CCceEEecC
Q 021470 185 GDGNPKAIYVDEDDIAMYTMKAINDPRT--LNRTMYLRP 221 (312)
Q Consensus 185 ~~~~~~~~~v~~~D~a~~~~~~l~~~~~--~~~~~~~~~ 221 (312)
......+.+.+++|+|++++.++..+.. .|+.+++.|
T Consensus 231 ~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 269 (276)
T 1mxh_A 231 RKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG 269 (276)
T ss_dssp TTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 0000112278999999999999976432 366777754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-16 Score=132.90 Aligned_cols=201 Identities=10% Similarity=0.069 Sum_probs=134.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+. .++.+ ..+.+. ...+.++++|++|++++.++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNA----AERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999997763 22222 122232 3467899999999999888876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CC-CCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SE-FGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~-~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++...- .-.++|+ |+ .+... +..+...|.
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-----~~~~~~~Y~ 181 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-----PWPGISLYS 181 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-----CSTTCHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-----CCCCchHHH
Confidence 789999999975421 167888888888887651 0346664 43 33211 111223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++..++||.+........... ............+...+|+|++++.++.
T Consensus 182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~~~r~~~pedvA~~v~fL~s 252 (271)
T 3v2g_A 182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH---------AEAQRERIATGSYGEPQDIAGLVAWLAG 252 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS---------HHHHHHTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh---------HHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 599998877653 479999999999876543321100 0000001112246789999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+.+.|
T Consensus 253 ~~~~~itG~~i~vdG 267 (271)
T 3v2g_A 253 PQGKFVTGASLTIDG 267 (271)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred cccCCccCCEEEeCc
Confidence 543 2467777754
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-17 Score=134.04 Aligned_cols=202 Identities=11% Similarity=0.086 Sum_probs=126.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+. .++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD----AEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC----HHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCC----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999742 33332 122232 3568899999999988888776
Q ss_pred --cCCEEEEcCCCCc--c--------------ccchhHhHHHHHHHHHHh----CC--Cceeec-CCCCCCcccccccCC
Q 021470 75 --LVDVVICAISGVH--I--------------RSHQILLQLKLVDAIKEA----GN--VKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 --~~d~v~~~~~~~~--~--------------~~~~~~~~~~l~~aa~~~----~~--v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++... . -+.|+.++.++++++... +. ..++|+ |+....... .
T Consensus 105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----~ 179 (280)
T 4da9_A 105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-----P 179 (280)
T ss_dssp HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----C
Confidence 7899999998731 1 126777777777776543 20 235665 543322111 1
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC-CCcceeeeeHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD-GNPKAIYVDEDDIAM 201 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~D~a~ 201 (312)
+...|..+|..++.+.+. .++++..++||.+............ . ..... ......+.+++|+|+
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~----~~~~~~~~p~~r~~~pedvA~ 251 (280)
T 4da9_A 180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----D----GLIESGLVPMRRWGEPEDIGN 251 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----H----HHHhhcCCCcCCcCCHHHHHH
Confidence 223455599998877653 4788899999998765443221110 0 00000 112235678999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++.++.... ..|+.+++.|
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdG 273 (280)
T 4da9_A 252 IVAGLAGGQFGFATGSVIQADG 273 (280)
T ss_dssp HHHHHHTSTTGGGTTCEEEEST
T ss_pred HHHHHhCccccCCCCCEEEECC
Confidence 9999998653 3467788864
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-17 Score=136.13 Aligned_cols=203 Identities=13% Similarity=0.032 Sum_probs=134.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
+.++++||||+|+||+++++.|+++|++|++++|+ .++.+........++.++++|++|++++.++++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDIN-----AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 46899999999999999999999999999999998 555443222225678899999999999888876
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..+++++ +++.+...++|+ |+..... +..+...|.
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~ 154 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-----GTPNMAAYV 154 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-----TCTTCHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc-----CCCCchhhH
Confidence 689999999975421 1567777777666 444442356665 4432111 111223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++..++||.+............ .............+...+|+|+++..++.
T Consensus 155 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~r~~~pedva~~v~~L~s 227 (247)
T 3rwb_A 155 AAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNE-------AFGFVEMLQAMKGKGQPEHIADVVSFLAS 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGG-------GHHHHHHHSSSCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhH-------HHHHHhcccccCCCcCHHHHHHHHHHHhC
Confidence 599888777653 5788999999998765433211100 00000000111235689999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+++.|
T Consensus 228 ~~~~~itG~~i~vdG 242 (247)
T 3rwb_A 228 DDARWITGQTLNVDA 242 (247)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCCCCEEEECC
Confidence 653 2467777754
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-16 Score=129.36 Aligned_cols=197 Identities=12% Similarity=0.102 Sum_probs=128.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
|+++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ..++.++++|++|++++.++++ +
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 74 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRR-----QERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCN 74 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999999998 5554332 223 3478899999999999998876 6
Q ss_pred CCEEEEcCCCCc-c---c-----------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 76 VDVVICAISGVH-I---R-----------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~-~---~-----------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
+|++||+++... . . +.|+.+..++++++. +.+ ..++|+ ||..... +..+...|.
T Consensus 75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~ 148 (248)
T 3asu_A 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW-----PYAGGNVYG 148 (248)
T ss_dssp CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-----CCTTCHHHH
T ss_pred CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhcc-----CCCCCchHH
Confidence 899999998642 1 0 156777677766665 455 567775 5433221 112223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEeccccc-ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFA-GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+|..++.+.+. .++++..++||.+. .++....... ......... ....+.+.+|+|++++.++
T Consensus 149 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~----~~~~~~~~~----~~~~~~~p~dvA~~v~~l~ 220 (248)
T 3asu_A 149 ATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG----DDGKAEKTY----QNTVALTPEDVSEAVWWVS 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------CCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC----chHHHHHHH----hccCCCCHHHHHHHHHHHh
Confidence 599999887763 37889999999987 4432210000 000000000 0123468999999999999
Q ss_pred cCCcc-CCceEEec
Q 021470 208 NDPRT-LNRTMYLR 220 (312)
Q Consensus 208 ~~~~~-~~~~~~~~ 220 (312)
.++.. .+..+.+.
T Consensus 221 s~~~~~~g~~i~v~ 234 (248)
T 3asu_A 221 TLPAHVNINTLEMM 234 (248)
T ss_dssp HSCTTCCCCEEEEC
T ss_pred cCCccceeeEEEEc
Confidence 87643 34555664
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-17 Score=132.61 Aligned_cols=190 Identities=11% Similarity=0.056 Sum_probs=117.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... .+ ..+.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL-AP---LVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGG-HH---HHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HH---HHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 47899999999999999999999999999999984322 11 112222 3468899999999999998886
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++ ++.+ ..++|+ ||...... ......|.
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~ 156 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRG-----GSGFAAFA 156 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCC-----CTTCHHHH
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCC-----CCCCccHH
Confidence 679999999975421 15666666666655 4455 467775 44322111 11123455
Q ss_pred hhHHHHHHHHHH-------hCCCe-EEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 136 DDKMVVRKAIED-------AGIPF-TYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~-~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
.+|..++.+.+. .++++ ..+.||.+...+....... .......... ..+.+++|+|++++.++
T Consensus 157 asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~-~~~~~pedvA~~~~~l~ 227 (252)
T 3h7a_A 157 SAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQ--------MFGKDALANP-DLLMPPAAVAGAYWQLY 227 (252)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchh--------hhhhhhhcCC-ccCCCHHHHHHHHHHHH
Confidence 599998877653 47788 7899998876544322110 0000111111 23789999999999999
Q ss_pred cCCc
Q 021470 208 NDPR 211 (312)
Q Consensus 208 ~~~~ 211 (312)
..+.
T Consensus 228 s~~~ 231 (252)
T 3h7a_A 228 QQPK 231 (252)
T ss_dssp HCCG
T ss_pred hCch
Confidence 8654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-17 Score=135.73 Aligned_cols=202 Identities=12% Similarity=0.079 Sum_probs=133.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... .+ ..+.+. ..++.++++|++|++++.++++
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL-QV---VADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-HH---HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HH---HHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999974322 11 112222 3478999999999999988876
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+..++++++.. .+.-.++|+ |+ .+..... ..+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~----~~~~~~ 183 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI----PQQVSH 183 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC----SSCCHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC----CCCcch
Confidence 789999999975431 1577777777777654 331145664 44 2321110 111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... ...+........+..++|+|++++.+
T Consensus 184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------~~~~~~~~p~~r~~~pedvA~~v~fL 254 (276)
T 3r1i_A 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY---------HALWEPKIPLGRMGRPEELTGLYLYL 254 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG---------HHHHGGGSTTSSCBCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH---------HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599998877653 578899999998876544322110 00000111122467899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|+.+.+.|
T Consensus 255 ~s~~~~~itG~~i~vdG 271 (276)
T 3r1i_A 255 ASAASSYMTGSDIVIDG 271 (276)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred cCccccCccCcEEEECc
Confidence 97643 2467777754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-16 Score=131.98 Aligned_cols=182 Identities=13% Similarity=0.135 Sum_probs=122.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARD-----VEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 5554322 2222 3467899999999999888775
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+..++++++.. .+ ..++|+ |+...... ..+..
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 177 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNP-----VADGA 177 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCC-----CTTCH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCC-----CCCCc
Confidence 48999999997221 0 1567777777776543 45 567775 54333211 12223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+...+...... ......++..+|+|+++..
T Consensus 178 ~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~p~dvA~~v~~ 241 (262)
T 3rkr_A 178 AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------------KKSALGAIEPDDIADVVAL 241 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------CCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------------ccccccCCCHHHHHHHHHH
Confidence 455599988877653 57999999999876543221110 0112346789999999999
Q ss_pred HhcCCc
Q 021470 206 AINDPR 211 (312)
Q Consensus 206 ~l~~~~ 211 (312)
++..+.
T Consensus 242 l~s~~~ 247 (262)
T 3rkr_A 242 LATQAD 247 (262)
T ss_dssp HHTCCT
T ss_pred HhcCcc
Confidence 998754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.2e-17 Score=132.84 Aligned_cols=193 Identities=16% Similarity=0.113 Sum_probs=128.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
+.++++||||+|+||+++++.|+++|++|++++|+.... ..+.++++|++|++++.++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 86 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETHG 86 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999974321 237889999999999888775
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++.. .+ ..++|+ |+....... .+...|.
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~ 160 (253)
T 2nm0_A 87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS-----AGQANYA 160 (253)
T ss_dssp SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH-----HHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----CCcHHHH
Confidence 479999999864321 1567777777766543 45 577775 554332211 0113455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .+++++.++||.+..+....... ... ..+........+++.+|+|++++.++.
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------~~~-~~~~~~~p~~~~~~p~dvA~~i~~l~s 232 (253)
T 2nm0_A 161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD-------EQR-ANIVSQVPLGRYARPEEIAATVRFLAS 232 (253)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------------CH-HHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH-------HHH-HHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 599998877663 46889999999886554322110 000 000011112347899999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
++. ..|+.+.+.|
T Consensus 233 ~~~~~~tG~~i~vdG 247 (253)
T 2nm0_A 233 DDASYITGAVIPVDG 247 (253)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCcCcEEEECC
Confidence 653 2467777764
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.4e-17 Score=133.42 Aligned_cols=198 Identities=19% Similarity=0.159 Sum_probs=129.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++. .+.+ ++..+++|++| +++.++++ +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~-----~~~~--~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRN-----PEEA--AQSL---GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----CHHH--HHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHH--HHhh---CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 3789999999999999999999999999999998 3332 1223 48899999998 76666543 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.+..++++++ ++.+ ..++|+ |+....... +..+...|..
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~~Y~~ 146 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAG---GPVPIPAYTT 146 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---TTSCCHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCC---CCCCCccHHH
Confidence 99999999864321 15666666666665 4556 678876 543321111 0122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++++++||.+..++....... ...............+.+.+|+|++++.++..
T Consensus 147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~ 220 (239)
T 2ekp_A 147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN------PELYEPITARIPMGRWARPEEIARVAAVLCGD 220 (239)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC------HHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 99998877653 488999999999877653321100 00000000011112467999999999999876
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
+. ..|+.+.+.|
T Consensus 221 ~~~~~tG~~~~vdg 234 (239)
T 2ekp_A 221 EAEYLTGQAVAVDG 234 (239)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCCCCEEEECC
Confidence 43 2466777754
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-17 Score=135.64 Aligned_cols=200 Identities=14% Similarity=0.079 Sum_probs=134.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++..+.+|++|++++.++++
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATT-----EAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 5444322 2222 3478899999999998888776
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.++.++++++.. .+ -.++|+ ||..... +..+...
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 176 (270)
T 3ftp_A 103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSA-----GNPGQVN 176 (270)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-----CCTTBHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC-----CCCCchh
Confidence 689999999965421 1677778888777653 34 356765 5422111 1112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... .............+.+++|+|++++.+
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~p~~r~~~pedvA~~v~~L 248 (270)
T 3ftp_A 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE--------QQTALKTQIPLGRLGSPEDIAHAVAFL 248 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH--------HHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH--------HHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55599988777653 478899999998876543221110 000011111223577899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|+.+++.|
T Consensus 249 ~s~~~~~itG~~i~vdG 265 (270)
T 3ftp_A 249 ASPQAGYITGTTLHVNG 265 (270)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCCCcCCccCcEEEECC
Confidence 86543 2467778864
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.5e-17 Score=134.31 Aligned_cols=180 Identities=11% Similarity=0.069 Sum_probs=125.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++|+||||+|+||+++++.|++.|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC-----HHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 444322 12222 3468899999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+|||+++..... +.|+.+..++++++ ++.+ ..++|+ |+....... .+...
T Consensus 106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----~~~~~ 179 (272)
T 1yb1_A 106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV-----PFLLA 179 (272)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH-----HHHHH
T ss_pred CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC-----CCchh
Confidence 689999999865421 15666655555554 4456 678776 543322111 01134
Q ss_pred hhhhHHHHHHHHHH----------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED----------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 134 ~~~~K~~~e~~~~~----------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
|..+|..++.+.+. .++++++++||.+....... .. .....+++.+|+|+++
T Consensus 180 Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----------~~-------~~~~~~~~~~dva~~i 241 (272)
T 1yb1_A 180 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------PS-------TSLGPTLEPEEVVNRL 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------TH-------HHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----------cc-------ccccCCCCHHHHHHHH
Confidence 55599998877653 26889999999876554210 00 1123578999999999
Q ss_pred HHHhcCCc
Q 021470 204 MKAINDPR 211 (312)
Q Consensus 204 ~~~l~~~~ 211 (312)
+.++..+.
T Consensus 242 ~~~~~~~~ 249 (272)
T 1yb1_A 242 MHGILTEQ 249 (272)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 99998764
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-17 Score=134.31 Aligned_cols=190 Identities=16% Similarity=0.157 Sum_probs=127.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARR-----VEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 2232 3468889999999998888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+..++++++... + .++|+ |+...... ..+...
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~ 154 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVN-----VRNAAV 154 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCC-----CTTCHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCC-----CCCCcH
Confidence 689999999864321 15777777777776543 3 46665 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|++++.++||.+..++....... .......... .+..+.+.+|+|++++.+
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~---~~~~~~~pedvA~~v~~l 227 (247)
T 2jah_A 155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT----ATKEMYEQRI---SQIRKLQAQDIAEAVRYA 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH----HHHHHHHHHT---TTSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch----hhHHHHHhcc---cccCCCCHHHHHHHHHHH
Confidence 55599888766553 589999999999876643321100 0000000000 112258999999999999
Q ss_pred hcCCc
Q 021470 207 INDPR 211 (312)
Q Consensus 207 l~~~~ 211 (312)
+..+.
T Consensus 228 ~s~~~ 232 (247)
T 2jah_A 228 VTAPH 232 (247)
T ss_dssp HHSCT
T ss_pred hCCCc
Confidence 98764
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=136.91 Aligned_cols=203 Identities=12% Similarity=0.075 Sum_probs=134.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ...++.++++|++|++++.++++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRD-----VSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 222 24578999999999988887765
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.++.++++++... +.-.++|+ |+...... ..+..
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~ 169 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----LPDHY 169 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTCH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----CCCCh
Confidence 789999999975421 15777777777776543 21246665 54332211 12223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+............ ..............+.+++|+|++++.
T Consensus 170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~r~~~p~dva~~v~~ 243 (266)
T 4egf_A 170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDE------AKSAPMIARIPLGRFAVPHEVSDAVVW 243 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSH------HHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccCh------HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 455599998877653 4788999999988765432211000 000000011112346789999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++.... ..|+.+++.|
T Consensus 244 L~s~~~~~itG~~i~vdG 261 (266)
T 4egf_A 244 LASDAASMINGVDIPVDG 261 (266)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCccCcEEEECC
Confidence 997643 2467777754
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.7e-17 Score=133.19 Aligned_cols=193 Identities=13% Similarity=0.032 Sum_probs=128.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
+.++++||||+|+||+++++.|+++|++|++++|+.... + .+..+++|++|++++.++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g 80 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------K-----GLFGVEVDVTDSDAVDRAFTAVEEHQG 80 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------T-----TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH--------H-----HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999984322 1 12248899999998888775
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++.. .+ ..++|+ |+....... .+...|.
T Consensus 81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----~~~~~Y~ 154 (247)
T 1uzm_A 81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----GNQANYA 154 (247)
T ss_dssp SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------CCHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-----CCChhHH
Confidence 579999999965421 1567777777776653 45 677776 554322111 1123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++++++||.+..++....... . . .. .........+.+++|+|++++.++.
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~--~--~~---~~~~~p~~~~~~~~dvA~~~~~l~s 226 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDER-I--Q--QG---ALQFIPAKRVGTPAEVAGVVSFLAS 226 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHH-H--H--HH---HGGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHH-H--H--HH---HHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 599988777653 478899999999876543321100 0 0 00 0000111247899999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
.+. ..|+.+.+.|
T Consensus 227 ~~~~~~~G~~i~vdg 241 (247)
T 1uzm_A 227 EDASYISGAVIPVDG 241 (247)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred ccccCCcCCEEEECC
Confidence 542 2467777764
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-16 Score=129.25 Aligned_cols=182 Identities=13% Similarity=0.130 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh-----ccCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF-----KEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l-----~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ...++.++++|++|.+++.++++
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARS-----KQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC-----HHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 222 11578899999999988888775
Q ss_pred -----cCCEEEEcCCCCccc-------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 -----LVDVVICAISGVHIR-------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.+...+++++ ++.+ ..++|. |+...... ..+.
T Consensus 82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~ 155 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYG-----FADG 155 (250)
T ss_dssp HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC------------CCT
T ss_pred HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCC-----CCCC
Confidence 689999999975321 15666777777766 4455 466665 54332221 1223
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++++..++||.+........... .....+++.+|+|++++
T Consensus 156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~~p~dva~~v~ 219 (250)
T 3nyw_A 156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP----------------FKDEEMIQPDDLLNTIR 219 (250)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC----------------SCGGGSBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC----------------cccccCCCHHHHHHHHH
Confidence 4555599998877653 478899999998876543321110 11234789999999999
Q ss_pred HHhcCCc
Q 021470 205 KAINDPR 211 (312)
Q Consensus 205 ~~l~~~~ 211 (312)
.++..+.
T Consensus 220 ~l~s~~~ 226 (250)
T 3nyw_A 220 CLLNLSE 226 (250)
T ss_dssp HHHTSCT
T ss_pred HHHcCCC
Confidence 9998764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-17 Score=134.43 Aligned_cols=210 Identities=11% Similarity=0.075 Sum_probs=133.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc--C---CCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE--Q---GAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~--~---~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+.. . ++.++++|++|++++.++++
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 22222 1 57889999999998888775
Q ss_pred -----cCCEEEEcCCCCccc------------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccC
Q 021470 75 -----LVDVVICAISGVHIR------------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~------------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|++||+++..... ..|+.+..++++++...- .-.++|+ |+....... .
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~ 156 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA----Q 156 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC----C
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC----C
Confidence 689999999864210 156777777777776431 0156665 543221110 0
Q ss_pred CCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC-CCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 129 EPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL-PSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.+...|..+|..++.+.+. .+++++.++||.+..++........... .................+.+++|+|
T Consensus 157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA 236 (280)
T 1xkq_A 157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIA 236 (280)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHH
Confidence 1123455599998877653 4799999999998876533211000000 0000000000011123578999999
Q ss_pred HHHHHHhcCC-c--cCCceEEecC
Q 021470 201 MYTMKAINDP-R--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~-~--~~~~~~~~~~ 221 (312)
++++.++..+ . ..|+.+.+.|
T Consensus 237 ~~v~~l~s~~~~~~~tG~~i~vdg 260 (280)
T 1xkq_A 237 NIILFLADRNLSFYILGQSIVADG 260 (280)
T ss_dssp HHHHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHHhcCcccccCccCCeEEECC
Confidence 9999998754 2 3467777754
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=136.12 Aligned_cols=200 Identities=10% Similarity=0.014 Sum_probs=132.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||++++++|+++|++|+++.++. .++.+ ..+.+. ..++.++.+|++|++++.++++
T Consensus 26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRD----AAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc----hHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999998876542 32322 222222 3578999999999999888876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH-----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK-----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~-----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... ..|+.+..++++++. +.+ ..++|+ |+..... +..+..
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~ 175 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVM-----GNRGQV 175 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHH-----CCTTCH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhcc-----CCCCCc
Confidence 789999999975421 157777888888764 344 567775 5422111 112223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+........... ............+.+++|+|+++..
T Consensus 176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~p~~~~~~~edva~~~~~ 246 (267)
T 4iiu_A 176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA---------LKEAMSMIPMKRMGQAEEVAGLASY 246 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH---------HHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH---------HHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 455599987766543 478899999999876543221000 0000001112346789999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++.... ..|+.+++.|
T Consensus 247 L~s~~~~~itG~~i~vdG 264 (267)
T 4iiu_A 247 LMSDIAGYVTRQVISING 264 (267)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCCcccCccCCEEEeCC
Confidence 997643 3467777753
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=131.24 Aligned_cols=190 Identities=16% Similarity=0.220 Sum_probs=121.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|++.|++|++++|+ .++.+.. +.+. ...+..+.+|++|++++.++++
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARR-----QARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 2332 3457788999999998888765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.+...+++++. +.+ ..++|+ ||...... ......
T Consensus 79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~-----~~~~~~ 152 (264)
T 3tfo_A 79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSV-----VPTAAV 152 (264)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC-----CTTCHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHccc-----CCCChh
Confidence 689999999975421 156666666666553 445 567775 54332211 111234
Q ss_pred hhhhHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 134 TFDDKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
|..+|..++.+.+. .++++..++||.+...+....... . ...... .....+...+|+|++++.+++
T Consensus 153 Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~-----~--~~~~~~--~~~~~~~~pedvA~~v~~l~s 223 (264)
T 3tfo_A 153 YCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE-----E--TMAAMD--TYRAIALQPADIARAVRQVIE 223 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch-----h--HHHHHH--hhhccCCCHHHHHHHHHHHhc
Confidence 55599998877653 267788899998876543322111 0 000000 011124689999999999998
Q ss_pred CCcc
Q 021470 209 DPRT 212 (312)
Q Consensus 209 ~~~~ 212 (312)
.+..
T Consensus 224 ~~~~ 227 (264)
T 3tfo_A 224 APQS 227 (264)
T ss_dssp SCTT
T ss_pred CCcc
Confidence 8753
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-17 Score=136.09 Aligned_cols=198 Identities=14% Similarity=0.096 Sum_probs=124.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc----CCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL----VDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~----~d~ 78 (312)
|++++||||+|+||+++++.|+++|++|++++|+.... .. . +++|++|.+++.++++. +|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-----------~~---~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IA---D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------EC---C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh-----------cc---c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999984321 11 1 67899999999998864 599
Q ss_pred EEEcCCCCc-cc------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcc---cc--c----------------
Q 021470 79 VICAISGVH-IR------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPA---KM--A---------------- 125 (312)
Q Consensus 79 v~~~~~~~~-~~------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~---~~--~---------------- 125 (312)
+||+++... .. ..|+.++.++++++. +.+ ..++|+ |+...... .. .
T Consensus 66 lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (257)
T 1fjh_A 66 LVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE 144 (257)
T ss_dssp EEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred EEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence 999999765 22 267788888887776 344 567775 44322200 00 0
Q ss_pred --ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeH
Q 021470 126 --NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDE 196 (312)
Q Consensus 126 --~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 196 (312)
.+..+...|..+|..++.+.+. .++++++++||.+..+......... ........+ ......+.++
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~ 219 (257)
T 1fjh_A 145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---RYGESIAKF--VPPMGRRAEP 219 (257)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C--CCSTTSCCCT
T ss_pred cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccch---hHHHHHHhc--ccccCCCCCH
Confidence 1111223455599998877653 4799999999998776543221100 000000000 1111247899
Q ss_pred HHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 197 DDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+|+|++++.++..+. ..|+.+.+.|
T Consensus 220 ~dvA~~~~~l~~~~~~~~tG~~~~vdg 246 (257)
T 1fjh_A 220 SEMASVIAFLMSPAASYVHGAQIVIDG 246 (257)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 999999999997653 2366777753
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.3e-17 Score=133.60 Aligned_cols=181 Identities=12% Similarity=0.045 Sum_probs=127.9
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.+++|+||||+|+||+++++.|++ .|++|++++|+ +++.+. .+.+. ..++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC-----hHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 368999999999999999999999 99999999998 444322 22232 3468999999999999988876
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcc--c--------c
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPA--K--------M 124 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~--~--------~ 124 (312)
++|+|||+++..... ..|+.++.++++++.... ...++|+ |+...... . .
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhc
Confidence 799999999865311 167788899999998763 0136665 54221100 0 0
Q ss_pred --------------------------cccCCCCCchhhhHHHHHHHHHH-----------hCCCeEEEeccccccccccc
Q 021470 125 --------------------------ANAMEPGRVTFDDKMVVRKAIED-----------AGIPFTYVSANCFAGYFLGG 167 (312)
Q Consensus 125 --------------------------~~~~~p~~~~~~~K~~~e~~~~~-----------~~~~~~i~r~~~~~~~~~~~ 167 (312)
..+..|...|..+|..++.+.+. .+++++.++||.+.......
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 00112344566699888777652 37889999999876442210
Q ss_pred CCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 168 LCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
..+.+.+|+|+.++.++..+
T Consensus 238 -----------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 -----------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp -----------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred -----------------------cccCChhHhhhhHhhhhcCc
Confidence 13679999999999999855
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=130.61 Aligned_cols=198 Identities=10% Similarity=0.043 Sum_probs=131.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccC--CCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSF--NDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~--~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ....+.++.+|+ +|.+++.++++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRN-----EEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 5444322 222 234789999999 88988887765
Q ss_pred -----cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCC
Q 021470 75 -----LVDVVICAISGVHI----R-----------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++.... . +.|+.+..++++++ ++.+ ..++|+ |+...... ..
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~ 160 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQG-----RA 160 (252)
T ss_dssp HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSC-----CT
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccC-----CC
Confidence 68999999996421 0 16777777787777 4444 567775 44322111 11
Q ss_pred CCCchhhhHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
+...|..+|..++.+.+. . .+++..+.||.+........... .....+...+|+|+++
T Consensus 161 ~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~----------------~~~~~~~~p~dva~~~ 224 (252)
T 3f1l_A 161 NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPT----------------EDPQKLKTPADIMPLY 224 (252)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTT----------------CCGGGSBCTGGGHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCc----------------cchhccCCHHHHHHHH
Confidence 223455599998877663 2 26677788988765443221110 1112456889999999
Q ss_pred HHHhcCCc--cCCceEEecCCCCcCCH
Q 021470 204 MKAINDPR--TLNRTMYLRPPKNILSQ 228 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~~~~~~s~ 228 (312)
+.++..+. ..|+.+.+.| +...++
T Consensus 225 ~~L~s~~~~~itG~~i~vdg-G~~~~~ 250 (252)
T 3f1l_A 225 LWLMGDDSRRKTGMTFDAQP-GRKPGI 250 (252)
T ss_dssp HHHHSGGGTTCCSCEEESSC-C-----
T ss_pred HHHcCccccCCCCCEEEeCC-CcCCCC
Confidence 99997653 2366777764 334443
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-17 Score=135.12 Aligned_cols=203 Identities=13% Similarity=0.047 Sum_probs=134.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~~ 76 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .++.+.+...-..++.++++|++|.+++.++++ ++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLA-----AEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3689999999999999999999999999999998 555543322225678999999999999988876 68
Q ss_pred CEEEEcCC-CCccc-------------------cchhHhHHHHHHHHHHhC---------CCceeec-CCCCCCcccccc
Q 021470 77 DVVICAIS-GVHIR-------------------SHQILLQLKLVDAIKEAG---------NVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 77 d~v~~~~~-~~~~~-------------------~~~~~~~~~l~~aa~~~~---------~v~~~v~-S~~g~~~~~~~~ 126 (312)
|++||+++ ..... +.|+.+..++++++...- .-.++|+ |+......
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---- 180 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG---- 180 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC----
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC----
Confidence 99999944 32110 156667777777766321 1235665 44332211
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
..+...|..+|..++.+.+. .++.+..++||.+...+......... ............+.+++|+
T Consensus 181 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------~~~~~~~~~~~~~~~pedv 252 (281)
T 3ppi_A 181 -QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEAL-------AKFAANIPFPKRLGTPDEF 252 (281)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHH-------HHHHHTCCSSSSCBCHHHH
T ss_pred -CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHH-------HHHHhcCCCCCCCCCHHHH
Confidence 11223455599988777653 47889999999887654432111000 0000000011357899999
Q ss_pred HHHHHHHhcCCccCCceEEecCC
Q 021470 200 AMYTMKAINDPRTLNRTMYLRPP 222 (312)
Q Consensus 200 a~~~~~~l~~~~~~~~~~~~~~~ 222 (312)
|++++.++.++...|+.+++.|.
T Consensus 253 A~~v~~l~s~~~~tG~~i~vdGG 275 (281)
T 3ppi_A 253 ADAAAFLLTNGYINGEVMRLDGA 275 (281)
T ss_dssp HHHHHHHHHCSSCCSCEEEESTT
T ss_pred HHHHHHHHcCCCcCCcEEEECCC
Confidence 99999999876556777788643
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-17 Score=136.23 Aligned_cols=205 Identities=11% Similarity=0.030 Sum_probs=132.9
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+ |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++.++++|++|++++.++++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-L-EKRVREIAKG-FGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-G-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-H-HHHHHHHHHh-cCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3689999999 99999999999999999999999842 1 1122211111 1347899999999999888775
Q ss_pred -cCCEEEEcCCCCcc---------c---------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHI---------R---------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~---------~---------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . ..|+.++.++++++...- .-.++|+ |+.+.... ..+..
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~ 172 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-----VPHYN 172 (285)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----CTTTT
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----CCCcc
Confidence 68999999986531 0 167788889999887653 0246775 54332211 11223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+..+........ ...............+.+++|+|++++.
T Consensus 173 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~~~~ 246 (285)
T 2p91_A 173 VMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF------HLLMEHTTKVNPFGKPITIEDVGDTAVF 246 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch------HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 455599998877653 479999999998876543211000 0000000000011236789999999999
Q ss_pred HhcCCcc--CCceEEecC
Q 021470 206 AINDPRT--LNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~~--~~~~~~~~~ 221 (312)
++..+.. .|+.+++.|
T Consensus 247 l~s~~~~~~tG~~~~vdg 264 (285)
T 2p91_A 247 LCSDWARAITGEVVHVDN 264 (285)
T ss_dssp HTSGGGTTCCSCEEEEST
T ss_pred HcCCcccCCCCCEEEECC
Confidence 9875432 366777754
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=134.71 Aligned_cols=199 Identities=16% Similarity=0.123 Sum_probs=132.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... .....+++|++|.+++.++++ +
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 94 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPGDLREAAYADGLPGAVAAGLGR 94 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence 47899999999999999999999999999999974322 122445889999988777664 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++ ++.+ ..++|+ |+...... ..+...|..
T Consensus 95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~a 168 (266)
T 3uxy_A 95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRP-----GPGHALYCL 168 (266)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBC-----CTTBHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC-----CCCChHHHH
Confidence 89999999976421 16777888888887 5556 567775 54332211 122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..++||.+.............. .................+.+++|+|++++.++..
T Consensus 169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 247 (266)
T 3uxy_A 169 TKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGF-DPDRAVAELGRTVPLGRIAEPEDIADVVLFLASD 247 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTC-CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 478899999999876543211000000 0000000011122234577999999999999987
Q ss_pred Ccc--CCceEEecC
Q 021470 210 PRT--LNRTMYLRP 221 (312)
Q Consensus 210 ~~~--~~~~~~~~~ 221 (312)
+.. .|+.+++.|
T Consensus 248 ~~~~itG~~i~vdG 261 (266)
T 3uxy_A 248 AARYLCGSLVEVNG 261 (266)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCcCCEEEECc
Confidence 532 367777764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-17 Score=134.30 Aligned_cols=209 Identities=11% Similarity=0.049 Sum_probs=136.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|+++.|+. .++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANS----TKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999988763 22221 122222 3568899999999999888775
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCc--eeec-CCCC-CCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVK--RFLP-SEFG-TDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~--~~v~-S~~g-~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... +.|+.+..++++++...- .+ ++|+ |+.. ... +..+...|
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~-----~~~~~~~Y 167 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSSNTSKDF-----SVPKHSLY 167 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECCTTTTTC-----CCTTCHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeCchhccC-----CCCCCchh
Confidence 689999999975421 267888889999988764 33 6665 4433 211 11222345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCc----cCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGS----ILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..+|..++.+.+. .++++..++||.+............. ...................+.+++|+|+++
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 247 (270)
T 3is3_A 168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV 247 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 5599998877653 47999999999987654331110000 000000000001111223467899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++.... ..|+.+++.|
T Consensus 248 ~~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 248 GFLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp HHHTSGGGTTCCSCEEEEST
T ss_pred HHHcCCccCCccCcEEEeCC
Confidence 99987543 2367777754
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=132.48 Aligned_cols=189 Identities=12% Similarity=0.030 Sum_probs=128.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+.... .....++++|++|++++.++++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc------------ccccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 6678999999999999999999999999999999984332 1235677899999988887765
Q ss_pred ---cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 ---LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++.... . +.|+.+..++++++...- .-.++|+ |+..... +..+...|
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y 143 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----PTPSMIGY 143 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----CCTTBHHH
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc-----CCCCcHHH
Confidence 68999999995421 0 157777888888887652 0136665 5433211 11122345
Q ss_pred hhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 135 ~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
..+|..++.+.+. .+++++.++||.+.......... . .....+++.+|+|++++.
T Consensus 144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------~----------~~~~~~~~~~dvA~~i~~ 207 (236)
T 1ooe_A 144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------N----------ADHSSWTPLSFISEHLLK 207 (236)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------T----------CCGGGCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC------C----------ccccccCCHHHHHHHHHH
Confidence 5599999887763 24778899999887654332110 0 011245678999999997
Q ss_pred HhcCCc---cCCceEEecCC
Q 021470 206 AINDPR---TLNRTMYLRPP 222 (312)
Q Consensus 206 ~l~~~~---~~~~~~~~~~~ 222 (312)
++..+. ..|+.+.+.|.
T Consensus 208 ~l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 208 WTTETSSRPSSGALLKITTE 227 (236)
T ss_dssp HHHCGGGCCCTTCEEEEEEE
T ss_pred HHcCCCcccccccEEEEecC
Confidence 774332 23666666543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-16 Score=131.65 Aligned_cols=209 Identities=12% Similarity=0.005 Sum_probs=134.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC--------CChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG--------VDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.++++||||+|+||+++++.|+++|++|++++|+... ...++.+.. +.+. ...+..+++|++|++++.+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 4789999999999999999999999999999984211 013333222 2222 3467889999999999888
Q ss_pred Hhc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCccccc
Q 021470 72 AVK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~ 125 (312)
+++ ++|++||+++..... +.|+.++.++++++.. .+.-.++|+ |+......
T Consensus 95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--- 171 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA--- 171 (280)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC---
Confidence 875 689999999975421 1577777777777643 321245665 54332111
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccC------CCCCccCCCCCeeEEeCCCCccee
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGL------CQPGSILPSKDSVVLLGDGNPKAI 192 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 192 (312)
......|..+|..++.+.+. .|+++..++||.+........ .... .......... ..+..
T Consensus 172 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~r 244 (280)
T 3pgx_A 172 --TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHP---SFVHSFPPMP--VQPNG 244 (280)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCG---GGGGGSCCBT--TBCSS
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCc---hhhhhhhhcc--cCCCC
Confidence 11123455599998877653 578999999999876543210 0000 0000000111 11124
Q ss_pred eeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 193 YVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+.+++|+|++++.++..+. ..|+.+++.|
T Consensus 245 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 275 (280)
T 3pgx_A 245 FMTADEVADVVAWLAGDGSGTLTGTQIPVDK 275 (280)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCSSCEEEEST
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 7899999999999997653 2367777754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=130.78 Aligned_cols=195 Identities=17% Similarity=0.181 Sum_probs=126.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC-CHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN-DYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d~~~l~~~~~~~d~v~~ 81 (312)
.++++||||+|+||+++++.|+++|++|++++|+ ++.. +.+ ..+.++ +|+. +.+.+.+.+.++|++||
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~~~~---~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~ 87 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL---KRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVL 87 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH---HHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-----HHHH---Hhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence 5789999999999999999999999999999998 4333 223 245666 9983 34444444558999999
Q ss_pred cCCCCccc--------------cchhHh----HHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHH
Q 021470 82 AISGVHIR--------------SHQILL----QLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVR 142 (312)
Q Consensus 82 ~~~~~~~~--------------~~~~~~----~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e 142 (312)
+++..... +.|+.+ ++.++..+++.+ ..++|+ |+...... ..+...|..+|..++
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~sK~a~~ 161 (249)
T 1o5i_A 88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP-----IENLYTSNSARMALT 161 (249)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTBHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCC-----CCCCchHHHHHHHHH
Confidence 99865421 144444 345566666777 778886 55332211 112234555999988
Q ss_pred HHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cC
Q 021470 143 KAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TL 213 (312)
Q Consensus 143 ~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~ 213 (312)
.+.+. .+++++.++||.+..+......... . .. . +........+.+++|+|++++.++..+. ..
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~-~~--~-~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~t 234 (249)
T 1o5i_A 162 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE---K-KK--Q-VESQIPMRRMAKPEEIASVVAFLCSEKASYLT 234 (249)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH---H-HH--H-HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhh---H-HH--H-HHhcCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence 77653 5789999999998876543211000 0 00 0 0001112357899999999999987643 23
Q ss_pred CceEEecC
Q 021470 214 NRTMYLRP 221 (312)
Q Consensus 214 ~~~~~~~~ 221 (312)
|+.+++.|
T Consensus 235 G~~~~vdg 242 (249)
T 1o5i_A 235 GQTIVVDG 242 (249)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 67777764
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=136.13 Aligned_cols=210 Identities=12% Similarity=0.049 Sum_probs=136.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+.. ...+ ..+.+. ..++.++.+|++|.+++.++++
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch----HHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999832 1111 112222 3468889999999988887764
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.++.++++++... + ..++|+ |+....... ..+...|.
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~----~~~~~~Y~ 179 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKA----VPKHAVYS 179 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSS----CSSCHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCC----CCCCcchH
Confidence 689999999965421 26788899999999876 4 467775 543321111 01123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCC---CCCeeEEeCC--CCcceeeeeHHHHHHHH
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILP---SKDSVVLLGD--GNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~v~~~D~a~~~ 203 (312)
.+|..++.+.+. .++++.+++||.+................ .......+.. ......+.+.+|+|+++
T Consensus 180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 259 (283)
T 1g0o_A 180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVV 259 (283)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHH
Confidence 599998877753 48999999999987764322110000000 0000000000 11122467899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
+.++..+. ..|+.+.+.|
T Consensus 260 ~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 260 CFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCccccCcCCCEEEeCC
Confidence 99997643 2466777754
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=135.99 Aligned_cols=215 Identities=12% Similarity=0.044 Sum_probs=136.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.+... ..++.++++|++|++++.++++ +
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHH-hcCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998 5554322211 1357899999999999888776 6
Q ss_pred CCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++.... . +.|+.++.++++++... + ..++|+ |+...... ......|..
T Consensus 83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~a 156 (270)
T 1yde_A 83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIG-----QAQAVPYVA 156 (270)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHC-----CTTCHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCC-----CCCCcccHH
Confidence 8999999986431 0 15777778888777531 2 256665 54321111 111234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCC-CeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSK-DSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
+|..++.+.+. .++++.+++||.+.++......... ... ..............+...+|+|++++.++.
T Consensus 157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s 233 (270)
T 1yde_A 157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS 233 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcc---cchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc
Confidence 99998877653 5899999999998876432211100 000 000000000111235789999999999987
Q ss_pred CCcc-CCceEEecCCCCcCCHHHHHH
Q 021470 209 DPRT-LNRTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 209 ~~~~-~~~~~~~~~~~~~~s~~e~~~ 233 (312)
+... .|+.+.+.|. ..+.+.+.+.
T Consensus 234 ~~~~itG~~i~vdGG-~~~~~~~~~~ 258 (270)
T 1yde_A 234 EANFCTGIELLVTGG-AELGYGCKAS 258 (270)
T ss_dssp HCTTCCSCEEEESTT-TTSCC-----
T ss_pred cCCCcCCCEEEECCC-eecccCcCcc
Confidence 5333 4677888754 3555444333
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=138.32 Aligned_cols=202 Identities=13% Similarity=0.094 Sum_probs=133.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++... .+.+ ...++.++++|++|++++.++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS-----LPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 444321 1222 24578999999999998888775
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++..... +.|+.++.++++++.. .+ ..++|+ |+..... +.....
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~ 175 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNR-----GQALQV 175 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHH-----TCTTCH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC-----CCCCcH
Confidence 689999999954321 1677788888887743 33 356665 5432211 111123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccccccc-ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFL-GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
.|..+|..++.+.+. .|+++..++||.+..... ...... ...............+.+.+|+|++++
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~~r~~~p~dvA~~v~ 249 (277)
T 4fc7_A 176 HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP------QASLSTKVTASPLQRLGNKTEIAHSVL 249 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC------HHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC------HHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence 444599998877653 478899999998875421 111000 000000001111234678999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.... ..|+.+.+.|
T Consensus 250 fL~s~~~~~itG~~i~vdG 268 (277)
T 4fc7_A 250 YLASPLASYVTGAVLVADG 268 (277)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHcCCccCCcCCCEEEECC
Confidence 9997643 3467777764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-17 Score=137.63 Aligned_cols=202 Identities=10% Similarity=0.104 Sum_probs=134.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTD-----PSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 544432 23332 3468889999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++..... +.|+.++.++++++.. .+ ..++|+ |+...... ..+...
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~-----~~~~~~ 174 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELA-----RATVAP 174 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB-----CTTCHH
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCC-----CCCchh
Confidence 689999999975321 1567777777666554 35 457775 55332211 122234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|+++..++||.+............ ..............+.+++|+|++++.+
T Consensus 175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~r~~~pedva~~v~~L 248 (271)
T 4ibo_A 175 YTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNP------EFDAWVKARTPAKRWGKPQELVGTAVFL 248 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCH------HHHHHHHHHSTTCSCBCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCH------HHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 55599998877653 5788999999998765432211000 0000000011123467899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|+.+++.|
T Consensus 249 ~s~~~~~itG~~i~vdG 265 (271)
T 4ibo_A 249 SASASDYVNGQIIYVDG 265 (271)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCccccCCCCcEEEECC
Confidence 87643 2467777764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-17 Score=133.59 Aligned_cols=204 Identities=12% Similarity=0.085 Sum_probs=133.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++|+||||+|+||+++++.|+++|++|+++++.......+....... ...++.++++|++|.+++.++++ +
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-LGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-cCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999999999885443321111211111 24578999999999998888876 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... ..|+.+..++++++ ++.+ ..++|+ |+..... +..+...|..
T Consensus 92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~a 165 (256)
T 3ezl_A 92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK-----GQFGQTNYST 165 (256)
T ss_dssp EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG-----SCSCCHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc-----CCCCCcccHH
Confidence 89999999975421 15667766655554 5556 567776 5533221 1122234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++..++||.+........... .............+.+.+|+|++++.++..
T Consensus 166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 237 (256)
T 3ezl_A 166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD--------VLEKIVATIPVRRLGSPDEIGSIVAWLASE 237 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH--------HHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence 99988777653 478889999998876544321110 000000011123467899999999999875
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..|+.+++.|
T Consensus 238 ~~~~~tG~~i~vdg 251 (256)
T 3ezl_A 238 ESGFSTGADFSLNG 251 (256)
T ss_dssp GGTTCCSCEEEEST
T ss_pred cccCCcCcEEEECC
Confidence 43 2467777754
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=132.13 Aligned_cols=181 Identities=14% Similarity=0.086 Sum_probs=125.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
++++|+||||+|+||++++++|++.| ++|++++|+.... . ....+.. ...++.++.+|++|++++.++++
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~-~-~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-K-ELEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC-H-HHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhh-H-HHHHhhc-cCCceEEEEecCCChHHHHHHHHHHHH
Confidence 46799999999999999999999999 9999999985543 1 2211111 13578999999999998888876
Q ss_pred -----cCCEEEEcCCCCc-cc--------------cchhHhHHHHHHHHHHh----------CC----Cceeec-CCCCC
Q 021470 75 -----LVDVVICAISGVH-IR--------------SHQILLQLKLVDAIKEA----------GN----VKRFLP-SEFGT 119 (312)
Q Consensus 75 -----~~d~v~~~~~~~~-~~--------------~~~~~~~~~l~~aa~~~----------~~----v~~~v~-S~~g~ 119 (312)
++|+|||+++... .. ..|+.+..++++++... +. ..++|+ |+...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 6999999999654 10 15677777777777543 10 245665 54332
Q ss_pred CcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCccee
Q 021470 120 DPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAI 192 (312)
Q Consensus 120 ~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (312)
.... .+..+...|..+|..++.+.+. .++++++++||.+....... ..
T Consensus 177 ~~~~--~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------~~ 231 (267)
T 1sny_A 177 SIQG--NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------SA 231 (267)
T ss_dssp CSTT--CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------TC
T ss_pred cccC--CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------CC
Confidence 2111 0111234455599998877753 47999999999875432210 12
Q ss_pred eeeHHHHHHHHHHHhcCC
Q 021470 193 YVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~ 210 (312)
+.+.+|+|+.++.++..+
T Consensus 232 ~~~~~~~a~~~~~~~~~~ 249 (267)
T 1sny_A 232 PLDVPTSTGQIVQTISKL 249 (267)
T ss_dssp SBCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 468899999999998754
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-16 Score=130.65 Aligned_cols=198 Identities=15% Similarity=0.061 Sum_probs=126.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-CCCeEEEccCCCHHHHHHHhcc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-QGAKLVSGSFNDYQSLVNAVKL------ 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~l~~~~~~------ 75 (312)
++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+.. .++.++++|++|++++.++++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRR-----EERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999999999998 5554322 22221 3688999999999999998864
Q ss_pred -CCEEEEcCCCCcc-c--------------cchhHhHHHHHHH----HHHhCCCc-eeec-CCCCCCcccccccCCCCCc
Q 021470 76 -VDVVICAISGVHI-R--------------SHQILLQLKLVDA----IKEAGNVK-RFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 -~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~a----a~~~~~v~-~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|++||+++.... . +.|+.+..+++++ +++.+ .. ++|+ |+...... ..+...
T Consensus 97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~-----~~~~~~ 170 (272)
T 2nwq_A 97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWP-----YPGSHV 170 (272)
T ss_dssp SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSC-----CTTCHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccC-----CCCCch
Confidence 5999999986431 1 1456665554444 44555 55 7775 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+..++....... .......... ...+...+|+|++++.+
T Consensus 171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~----~~~~~~pedvA~~v~~l 242 (272)
T 2nwq_A 171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG----DQARYDKTYA----GAHPIQPEDIAETIFWI 242 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------------CCCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc----chHHHHHhhc----cCCCCCHHHHHHHHHHH
Confidence 55599999888764 478899999999876543211000 0000000000 11347899999999999
Q ss_pred hcCCcc-CCceEEec
Q 021470 207 INDPRT-LNRTMYLR 220 (312)
Q Consensus 207 l~~~~~-~~~~~~~~ 220 (312)
+..+.. .++.+.+.
T Consensus 243 ~s~~~~~~g~~i~v~ 257 (272)
T 2nwq_A 243 MNQPAHLNINSLEIM 257 (272)
T ss_dssp HTSCTTEEEEEEEEE
T ss_pred hCCCccCccceEEEe
Confidence 987643 24445554
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.73 E-value=2e-16 Score=130.36 Aligned_cols=205 Identities=8% Similarity=0.035 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||+++++.|+++|++|+++.++.... .....+.+. ..++.++++|++|++++.++++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEG---AATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHH---HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999986653221 111222222 3568899999999999888876
Q ss_pred -cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhCCCc--eeec-CCCCCCcccccccCCCCCchh
Q 021470 75 -LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAGNVK--RFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~~v~--~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++.... . +.|+.+..++++++...- .+ ++|+ |+.... ..+..+...|.
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~----~~~~~~~~~Y~ 159 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGR----DGGGPGALAYA 159 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHH----HCCSTTCHHHH
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhc----cCCCCCcHHHH
Confidence 68999999986521 0 267888899999988763 22 5664 442211 00111223455
Q ss_pred hhHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 136 DDKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 136 ~~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
.+|..++.+.+. . ++++..+.||.+...+........ .............+.+++|+|++++.++..
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~-------~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 232 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPE-------VRERVAGATSLKREGSSEDVAGLVAFLASD 232 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------CCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChH-------HHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 599998877753 2 377788899988765443221110 001111112223567899999999999876
Q ss_pred Cc--cCCceEEecCC
Q 021470 210 PR--TLNRTMYLRPP 222 (312)
Q Consensus 210 ~~--~~~~~~~~~~~ 222 (312)
.. ..|+.+++.|.
T Consensus 233 ~~~~itG~~i~vdGg 247 (259)
T 3edm_A 233 DAAYVTGACYDINGG 247 (259)
T ss_dssp GGTTCCSCEEEESBC
T ss_pred cccCccCCEEEECCC
Confidence 53 24677888643
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.2e-17 Score=133.42 Aligned_cols=209 Identities=17% Similarity=0.126 Sum_probs=134.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAART-----VERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 2232 3468899999999999888775
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++.... . +.|+.++.++++++...- .-.++|+ |+..... +..+...|
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y 160 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH-----SQAKYGAY 160 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC-----CCTTCHHH
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc-----CCCccHHH
Confidence 68999999976421 0 157777777777765321 0136665 5433211 11122345
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCc--cCCC-CCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGS--ILPS-KDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..+|..++.+.+. .++++..++||.+............. .... ...............+.+++|+|++++
T Consensus 161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 240 (264)
T 3ucx_A 161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAIL 240 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHH
Confidence 5599998877653 57999999999987654321110000 0000 000000111222335779999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.... ..|+.+++.|
T Consensus 241 ~L~s~~~~~itG~~i~vdG 259 (264)
T 3ucx_A 241 FMASDLASGITGQALDVNC 259 (264)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHcCccccCCCCCEEEECC
Confidence 9987643 2467777764
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.8e-17 Score=135.62 Aligned_cols=217 Identities=12% Similarity=0.041 Sum_probs=135.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCC-------ChHHHHH-hhhh--ccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-------DIEKVQM-LLSF--KEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~-~~~l--~~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ..++... .+.+ ...++.++++|++|++++.++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 92 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 57899999999999999999999999999999873210 0222221 1111 145789999999999999888
Q ss_pred hc-------cCCEEEEcCCCCccc----------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCC
Q 021470 73 VK-------LVDVVICAISGVHIR----------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++ ++|++||+++..... +.|+.++.++++++.. .+.-.++|+ |+....... ..+..+
T Consensus 93 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~~ 171 (278)
T 3sx2_A 93 LQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV-GSADPG 171 (278)
T ss_dssp HHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-CCSSHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC-ccCCCC
Confidence 76 789999999976422 2677777777777654 221246665 443221111 001111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc---CCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI---LPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
...|..+|..++.+.+. .++++..++||.+.............. ............... ..+.+++|+|
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA 250 (278)
T 3sx2_A 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVA 250 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHH
Confidence 12355599998877653 478899999999876543210000000 000000001111122 4678999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++.... ..|+.+++.|
T Consensus 251 ~~v~~l~s~~~~~itG~~i~vdG 273 (278)
T 3sx2_A 251 NAVAWLVSDQARYITGVTLPVDA 273 (278)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCcccccccCCEEeECC
Confidence 99999987643 2467777754
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.3e-17 Score=134.95 Aligned_cols=198 Identities=15% Similarity=0.145 Sum_probs=133.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~~ 76 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.. +.+ ...+.++++|++|++++.++++ ++
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~--~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~i 80 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR-----GEDVV--ADL-GDRARFAAADVTDEAAVASALDLAETMGTL 80 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS-----CHHHH--HHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc-----hHHHH--Hhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999996 22221 222 4578999999999999988876 79
Q ss_pred CEEEEcCCCCcc------------------ccchhHhHHHHHHHHHHhC-----------CCceeec-CCCCCCcccccc
Q 021470 77 DVVICAISGVHI------------------RSHQILLQLKLVDAIKEAG-----------NVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 77 d~v~~~~~~~~~------------------~~~~~~~~~~l~~aa~~~~-----------~v~~~v~-S~~g~~~~~~~~ 126 (312)
|++||+++.... .+.|+.+..++++++...- .-.++|+ |+.......
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 157 (257)
T 3tl3_A 81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ--- 157 (257)
T ss_dssp EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH---
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC---
Confidence 999999996421 1267778888888877542 1235665 443322111
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeHHH
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDEDD 198 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D 198 (312)
.+...|..+|..++.+.+. .++++..++||.+............ .......... ..+.+++|
T Consensus 158 --~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~r~~~p~d 227 (257)
T 3tl3_A 158 --IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEA--------RASLGKQVPHPSRLGNPDE 227 (257)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHH--------HHHHHHTSSSSCSCBCHHH
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHH--------HHHHHhcCCCCCCccCHHH
Confidence 0113455599988777653 4788899999988765433211100 0000000111 35778999
Q ss_pred HHHHHHHHhcCCccCCceEEecC
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
+|++++.+++++...|+.+++.|
T Consensus 228 va~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tl3_A 228 YGALAVHIIENPMLNGEVIRLDG 250 (257)
T ss_dssp HHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHhcCCCCCCCEEEECC
Confidence 99999999988655677888864
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.9e-17 Score=133.68 Aligned_cols=204 Identities=12% Similarity=0.056 Sum_probs=133.0
Q ss_pred cEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 4 SKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 4 ~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
++++||||+ |+||+++++.|+++|++|++++|+. .. .+..+.+... ..+..++++|++|++++.++++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KL-KGRVEEFAAQ-LGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TT-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HH-HHHHHHHHHh-cCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 689999999 9999999999999999999999985 21 2222221111 1245789999999999988876
Q ss_pred cCCEEEEcCCCCcc----------c---------cchhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCCCc
Q 021470 75 LVDVVICAISGVHI----------R---------SHQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 ~~d~v~~~~~~~~~----------~---------~~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . ..|+.++.++++++...-. -.++|+ |+...... ..+...
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~ 161 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----IPNYNV 161 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTTTH
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----CCCchH
Confidence 68999999986431 1 1577788889998876520 136665 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... ...............+.+++|+|++++.+
T Consensus 162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~p~~~~~~~~dva~~v~~l 235 (265)
T 1qsg_A 162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF------RKMLAHCEAVTPIRRTVTIEDVGNSAAFL 235 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc------HHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55599998887763 378899999999876543221100 00000000000112467899999999999
Q ss_pred hcCCcc--CCceEEecC
Q 021470 207 INDPRT--LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~--~~~~~~~~~ 221 (312)
+..+.. .|+.+++.|
T Consensus 236 ~s~~~~~~tG~~~~vdg 252 (265)
T 1qsg_A 236 CSDLSAGISGEVVHVDG 252 (265)
T ss_dssp TSGGGTTCCSCEEEEST
T ss_pred hCchhcCccCCEEEECC
Confidence 876432 366777764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=135.98 Aligned_cols=201 Identities=9% Similarity=0.048 Sum_probs=131.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++|+||||+|+||+++++.|+++|++|++++|+.... ...+..+++|++|++++.++++ +
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999984321 2367889999999999888876 7
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+..++++++.. .+ ..++|+ |+...... ..+...|..
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~a 155 (269)
T 3vtz_A 82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAA-----TKNAAAYVT 155 (269)
T ss_dssp CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSB-----CTTCHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccC-----CCCChhHHH
Confidence 89999999975421 1577777777776543 45 567775 44332211 112234555
Q ss_pred hHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCC---CCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 137 DKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPS---KDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 137 ~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+|..++.+.+. . ++++..++||.+................. ......+........+.+++|+|++++.++
T Consensus 156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 235 (269)
T 3vtz_A 156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA 235 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 99998887763 2 67788899999876543211000000000 000000111112235678999999999999
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|+.+++.|
T Consensus 236 s~~~~~itG~~i~vdG 251 (269)
T 3vtz_A 236 SDRSSFITGACLTVDG 251 (269)
T ss_dssp SGGGTTCCSCEEEEST
T ss_pred CCccCCCcCcEEEECC
Confidence 7653 2467777764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=132.47 Aligned_cols=206 Identities=8% Similarity=0.055 Sum_probs=133.7
Q ss_pred CcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGY--LGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+ ||+++++.|+++|++|+++.|+... .+... ..+.....++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL--EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH--HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 478999999988 9999999999999999999997321 12221 2222333479999999999988888775
Q ss_pred --cCCEEEEcCCCCcc----c--------------cchhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHI----R--------------SHQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~----~--------------~~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . ..|+....++++++...-. -.++|+ |+...... .....
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~ 159 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-----MPNYN 159 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----CTTTH
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-----CCCcc
Confidence 68999999986531 0 1567777888888876530 135664 44332211 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+............ ..............+.+.+|+|++++.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~~~~~~~p~dva~~v~~ 233 (266)
T 3oig_A 160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFN------SILKDIEERAPLRRTTTPEEVGDTAAF 233 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH------HHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchH------HHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 445599998877653 4788999999988765433211100 000000000111246789999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++..+. ..|+.+++.|
T Consensus 234 l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 234 LFSDMSRGITGENLHVDS 251 (266)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HcCCchhcCcCCEEEECC
Confidence 998643 3467777754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-16 Score=131.93 Aligned_cols=191 Identities=10% Similarity=0.050 Sum_probs=123.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+.. +.+ ....+.++++|++|++++.++++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR-----PDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 4443321 222 12234899999999998888775
Q ss_pred ---cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh----C-CCceeec-CCCCCCcccccccCCC
Q 021470 75 ---LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA----G-NVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~----~-~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.+..++.+++... + .-.++|+ |+...... ..+
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~~~ 182 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----RPN 182 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----CTT
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----CCC
Confidence 579999999964321 15666666666655432 2 0246665 54332211 122
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+............ . ...... ....+...+|+|+++
T Consensus 183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~-~~~~~~-------~~~~~~~pedvA~~v 253 (281)
T 4dry_A 183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV-L-QANGEV-------AAEPTIPIEHIAEAV 253 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE-E-CTTSCE-------EECCCBCHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh-h-hhhhcc-------cccCCCCHHHHHHHH
Confidence 23455599998877653 5788899999988765433221100 0 000011 112467899999999
Q ss_pred HHHhcCCcc
Q 021470 204 MKAINDPRT 212 (312)
Q Consensus 204 ~~~l~~~~~ 212 (312)
+.++..+..
T Consensus 254 ~fL~s~~~~ 262 (281)
T 4dry_A 254 VYMASLPLS 262 (281)
T ss_dssp HHHHHSCTT
T ss_pred HHHhCCCcc
Confidence 999998753
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-17 Score=131.41 Aligned_cols=201 Identities=11% Similarity=0.045 Sum_probs=133.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-----LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-----~~ 76 (312)
+++++||||+|+||+++++.|++ .|+.|++..|+... ....+.++++|++|++++.++++ ++
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~i 71 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIKNVSF 71 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTTTCCE
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHHhCCC
Confidence 67899999999999999999999 78999999887432 13467899999999999998886 78
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCc--eeec-CCCCCCcccccccCCCCCchhhhHH
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVK--RFLP-SEFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~--~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
|++||+++..... +.|+.+..++++++...- .+ ++|+ |+...... ..+...|..+|.
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~-----~~~~~~Y~asKa 145 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFIA-----KPNSFAYTLSKG 145 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTCC-----CTTBHHHHHHHH
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHccC-----CCCCchhHHHHH
Confidence 9999999975321 267888888888887653 22 5664 44322111 111234555999
Q ss_pred HHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc--CC-CCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 140 VVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI--LP-SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 140 ~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
.++.+.+. .++++..++||.+..+........... .. ................+.+++|+|++++.++..
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 225 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcC
Confidence 98877753 579999999999876543221100000 00 000000011111223577899999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
+. ..|+.+++.|
T Consensus 226 ~~~~itG~~i~vdG 239 (244)
T 4e4y_A 226 KSKFMTGGLIPIDG 239 (244)
T ss_dssp GGTTCCSCEEEEST
T ss_pred ccccccCCeEeECC
Confidence 53 2367777754
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=130.72 Aligned_cols=203 Identities=9% Similarity=-0.033 Sum_probs=130.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++..++.. ++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA----AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999866532 2222 112222 3468889999999999888875
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||+++..... +.|+.+..++++++...- .-.++|+ |+..... +......|..
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~a 177 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL-----LHPSYGIYAA 177 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----CCTTCHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----CCCCchHHHH
Confidence 689999999975421 167888888888887652 0135664 4422111 1112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .++++..+.||.+........... .....+........+.+++|+|++++.++..
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 250 (267)
T 3u5t_A 178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD-------EVRDRFAKLAPLERLGTPQDIAGAVAFLAGP 250 (267)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH-------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998887763 378899999998876543211100 0000111112223567899999999999976
Q ss_pred Cc-c-CCceEEecC
Q 021470 210 PR-T-LNRTMYLRP 221 (312)
Q Consensus 210 ~~-~-~~~~~~~~~ 221 (312)
.. . .|+.+.+.|
T Consensus 251 ~~~~itG~~i~vdG 264 (267)
T 3u5t_A 251 DGAWVNGQVLRANG 264 (267)
T ss_dssp TTTTCCSEEEEESS
T ss_pred cccCccCCEEEeCC
Confidence 53 2 356666653
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.7e-16 Score=130.45 Aligned_cols=207 Identities=12% Similarity=0.048 Sum_probs=131.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+||++++++|++.| +.|+++.|+ .++.+.+......++.++++|++|++++.++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS-----EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC-----HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC-----HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3799999999999999999999985 788888998 555543322224578899999999999888775
Q ss_pred -cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI-R--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . +.|+.+..++++++ ++.+ .++|+ ||...... ..+...
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~-----~~~~~~ 149 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY-----FSSWGA 149 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS-----SCCSHH
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC-----CCCcch
Confidence 68999999997432 1 15777777887777 4444 46664 54332211 122234
Q ss_pred hhhhHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCccC-CCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 134 TFDDKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGSIL-PSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
|..+|..++.+.+. .++++..++||.+............... ........+........+.+.+|+|++++.++
T Consensus 150 Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~ 229 (254)
T 3kzv_A 150 YGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLA 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHH
Confidence 55599998887764 4788899999988766543321110000 00000000000111235778999999999998
Q ss_pred cCC--c-cCCceEEecC
Q 021470 208 NDP--R-TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~--~-~~~~~~~~~~ 221 (312)
..+ . ..|+.+++.|
T Consensus 230 s~~~~~~itG~~i~vdg 246 (254)
T 3kzv_A 230 LHGIPDGVNGQYLSYND 246 (254)
T ss_dssp HHCCCGGGTTCEEETTC
T ss_pred hhcccCCCCccEEEecC
Confidence 765 2 3456666643
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=132.21 Aligned_cols=206 Identities=12% Similarity=0.076 Sum_probs=130.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444321 2232 2357889999999998887765
Q ss_pred --cCCEEEEcCCCC-ccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGV-HIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~-~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.. ... ..|+.+..++++++.. .+ ..++|+ |+...... ..+..
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~ 155 (262)
T 1zem_A 82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG-----PPNMA 155 (262)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC-----CTTBH
T ss_pred hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccC-----CCCCc
Confidence 789999999865 210 1567777777776654 34 567775 54221111 11123
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCC-------CCCccCCCCCe-e-EEeCCCCcceeeeeH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLC-------QPGSILPSKDS-V-VLLGDGNPKAIYVDE 196 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~-------~~~~~~~~~~~-~-~~~~~~~~~~~~v~~ 196 (312)
.|..+|..++.+.+. .++++..++||.+..++..... .... ...... . ..+........+...
T Consensus 156 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~r~~~p 234 (262)
T 1zem_A 156 AYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQY-FSTDPKVVAQQMIGSVPMRRYGDI 234 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTT-SCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccc-cccCHHHHHHHHHhcCCCCCCcCH
Confidence 455599887776653 4789999999988765432210 0000 000000 0 000000111246789
Q ss_pred HHHHHHHHHHhcCCc-c-CCceEEec
Q 021470 197 DDIAMYTMKAINDPR-T-LNRTMYLR 220 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~-~-~~~~~~~~ 220 (312)
+|+|++++.++..+. . .|+.+.+.
T Consensus 235 ~dvA~~v~~l~s~~~~~itG~~i~vd 260 (262)
T 1zem_A 235 NEIPGVVAFLLGDDSSFMTGVNLPIA 260 (262)
T ss_dssp GGSHHHHHHHHSGGGTTCCSCEEEES
T ss_pred HHHHHHHHHHcCchhcCcCCcEEecC
Confidence 999999999987643 2 35666664
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-16 Score=129.65 Aligned_cols=205 Identities=11% Similarity=0.050 Sum_probs=130.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|+++|++|+++.|.... .++.+ ..+.+. ..++.++++|++|++++.++++
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKD--SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGG--HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccC--HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999886332 22222 222232 3457889999999999988876
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+..++++++... + -.++|+ |+....... .....|.
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~-----~~~~~Y~ 162 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAYT-----GFYSTYA 162 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHHH-----CCCCC--
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccCC-----CCCchhH
Confidence 689999999965421 16788888889888764 2 245664 442211111 1123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .++++..+.||.+...+....... ..............+.+.+|+|++++.++.
T Consensus 163 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~r~~~pedvA~~v~~L~s 235 (262)
T 3ksu_A 163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK-------ESTAFHKSQAMGNQLTKIEDIAPIIKFLTT 235 (262)
T ss_dssp ---CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------------CCCCSCCGGGTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch-------HHHHHHHhcCcccCCCCHHHHHHHHHHHcC
Confidence 599988877653 478899999998876543321111 001111111122356789999999999998
Q ss_pred CCcc-CCceEEecCC
Q 021470 209 DPRT-LNRTMYLRPP 222 (312)
Q Consensus 209 ~~~~-~~~~~~~~~~ 222 (312)
.... .|+.+.+.|.
T Consensus 236 ~~~~itG~~i~vdGg 250 (262)
T 3ksu_A 236 DGWWINGQTIFANGG 250 (262)
T ss_dssp TTTTCCSCEEEESTT
T ss_pred CCCCccCCEEEECCC
Confidence 6332 3677777643
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.70 E-value=6.2e-16 Score=126.83 Aligned_cols=182 Identities=13% Similarity=0.046 Sum_probs=128.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
+++|+||||+|+||+++++.|+++|++|++++|+.... ....+.+|++|.+++.++++ +
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999984322 22467899999998888775 4
Q ss_pred CCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhCCC--ceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 76 VDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAGNV--KRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 76 ~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~~v--~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
+|++||+++..... +.|+.+..++++++...- . .++|+ |+..... +..+...|..+
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~-----~~~~~~~Y~~s 161 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLL-NQGGLFVLTGASAALN-----RTSGMIAYGAT 161 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE-EEEEEEEEECCGGGGS-----CCTTBHHHHHH
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhh-ccCCEEEEEechhhcc-----CCCCCchhHHH
Confidence 69999999964211 167888889999988753 2 25665 5433211 11222345559
Q ss_pred HHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 138 KMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 138 K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
|..++.+.+. .++++..++||.+.......... ......+++++|+|++++.++.
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~~~dva~~i~~l~~ 225 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS----------------DANFDDWTPLSEVAEKLFEWST 225 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT----------------TSCGGGSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc----------------cccccccCCHHHHHHHHHHHhc
Confidence 9999888763 35778889999887654332111 1122357789999999999998
Q ss_pred C-C--ccCCceEEec
Q 021470 209 D-P--RTLNRTMYLR 220 (312)
Q Consensus 209 ~-~--~~~~~~~~~~ 220 (312)
+ . ...|+.+++.
T Consensus 226 ~~~~~~~tG~~i~v~ 240 (251)
T 3orf_A 226 NSDSRPTNGSLVKFE 240 (251)
T ss_dssp CGGGCCCTTCEEEEE
T ss_pred CccccCCcceEEEEe
Confidence 8 2 2346677765
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-15 Score=127.60 Aligned_cols=209 Identities=16% Similarity=0.034 Sum_probs=131.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .++.+.+......++.++++|++|++++.++++ +
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKS-----AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC-----HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999998 555544333335678999999999988887765 6
Q ss_pred CCEEEEcCCCCccc-------------------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCCCc
Q 021470 76 VDVVICAISGVHIR-------------------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|++||+++..... ..|+.+..++++++...- .-.++|+ |+...... ..+...
T Consensus 80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~ 154 (281)
T 3zv4_A 80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----NGGGPL 154 (281)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----SSSCHH
T ss_pred CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----CCCCch
Confidence 79999999864210 156777777777765431 0135554 44322111 111233
Q ss_pred hhhhHHHHHHHHHH------hCCCeEEEecccccccccccCCCCCc-cCCCCCe-eEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGS-ILPSKDS-VVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..++.+.+. .++++..+.||.+............. ....... ............+...+|+|++++.
T Consensus 155 Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f 234 (281)
T 3zv4_A 155 YTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVF 234 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 55599998877763 23777888999887654322111000 0000000 0000111122356789999999999
Q ss_pred HhcCCc---cCCceEEecC
Q 021470 206 AINDPR---TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~---~~~~~~~~~~ 221 (312)
++.++. ..|+.+.+.|
T Consensus 235 L~s~~~~~~itG~~i~vdG 253 (281)
T 3zv4_A 235 FATRGDSLPATGALLNYDG 253 (281)
T ss_dssp HHSTTTSTTCSSCEEEESS
T ss_pred hhcccccccccCcEEEECC
Confidence 998432 3467777754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-15 Score=126.08 Aligned_cols=188 Identities=15% Similarity=0.081 Sum_probs=127.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC-----h-HHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-----I-EKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~-~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.++++||||+|.||++++++|+++|++|++++|+..... . +..+..... ..++.++++|++|++++.++++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHH
Confidence 578999999999999999999999999999999865321 0 111111111 3568899999999999888876
Q ss_pred -----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.+..++++++... + ..++|+ |+....... ..+
T Consensus 88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----~~~ 162 (285)
T 3sc4_A 88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPK----WLR 162 (285)
T ss_dssp HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGG----GSC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCC----CCC
Confidence 789999999975421 16788888888887654 3 456775 443322111 011
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEeccc-ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANC-FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
...|..+|..++.+.+. .|+++..+.||. +........... ......+...+|+|++
T Consensus 163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~---------------~~~~~r~~~pedvA~~ 227 (285)
T 3sc4_A 163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG---------------DEAMARSRKPEVYADA 227 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS---------------CCCCTTCBCTHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc---------------cccccCCCCHHHHHHH
Confidence 23455599998877653 578999999994 433222111100 0011245688999999
Q ss_pred HHHHhcCCc
Q 021470 203 TMKAINDPR 211 (312)
Q Consensus 203 ~~~~l~~~~ 211 (312)
++.++..+.
T Consensus 228 ~~~l~s~~~ 236 (285)
T 3sc4_A 228 AYVVLNKPS 236 (285)
T ss_dssp HHHHHTSCT
T ss_pred HHHHhCCcc
Confidence 999998764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=131.91 Aligned_cols=205 Identities=12% Similarity=0.073 Sum_probs=133.2
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+ |+||+++++.|+++|++|++++|+.. . .+..+.+... ..++.++++|++|++++.++++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~-~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-L-EKRVRPIAQE-LNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-T-HHHHHHHHHH-TTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-H-HHHHHHHHHh-cCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4789999999 99999999999999999999999853 2 2222222111 1348899999999998888776
Q ss_pred -cCCEEEEcCCCCcc--------c----------cchhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI--------R----------SHQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~--------~----------~~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . ..|+.+..++++++...-. -.++|+ |+.+.... ..+...
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~ 157 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----MAHYNV 157 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTCHH
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----CCCchh
Confidence 67999999986531 0 1677888899999876510 136665 54332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+........... . .....+........+.+.+|+|++++.+
T Consensus 158 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~p~dva~~~~~l 231 (275)
T 2pd4_A 158 MGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-----R-MILKWNEINAPLRKNVSLEEVGNAGMYL 231 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-----H-HHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc-----H-HHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence 55599998877653 389999999999876543221100 0 0000000000112356899999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+..+. ..|+.+++.|
T Consensus 232 ~s~~~~~~tG~~~~vdg 248 (275)
T 2pd4_A 232 LSSLSSGVSGEVHFVDA 248 (275)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCccccCCCCCEEEECC
Confidence 97542 2456667753
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.69 E-value=7e-17 Score=133.73 Aligned_cols=207 Identities=11% Similarity=0.038 Sum_probs=132.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ .++.+. .+.+. ...+..+.+|++|++++.++++
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRR-----EENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 3689999999999999999999999999999998 444321 22222 2356788999999999888876
Q ss_pred cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 75 LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|++||+++..... +.|+.+...+.+++ ++.+ ..++|+ |+..... +..+...|.
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~Y~ 158 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIM-----PSQEMAHYS 158 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTS-----CCTTCHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhcc-----CCCcchHHH
Confidence 789999999975421 15666655555544 4455 567775 4433211 112223455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe--------eEEeCCCCcceeeeeHHHHH
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS--------VVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~D~a 200 (312)
.+|..++.+.+. .++++..+.||.+.......+...... ..... ............+.+++|+|
T Consensus 159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 237 (267)
T 3t4x_A 159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYP-NEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA 237 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSST-TSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCc-ccCCCHHHHHHHHhhccCCcccccCccCHHHHH
Confidence 599998887764 357788899998876532211100000 00000 00000011124578999999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++.... ..|+.+++.|
T Consensus 238 ~~v~fL~s~~~~~itG~~i~vdG 260 (267)
T 3t4x_A 238 HLVTFLSSPLSSAINGSALRIDG 260 (267)
T ss_dssp HHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHcCccccCccCCeEEECC
Confidence 99999987543 2367778864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-16 Score=132.15 Aligned_cols=182 Identities=15% Similarity=0.124 Sum_probs=124.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ...++.++.+|++|.+++.++++
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 102 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 102 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5444322 112 12357899999999988888765
Q ss_pred ---cCCEEEEc-CCCCccc-------------cchhHhHHHHHHHHHHh---CCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 ---LVDVVICA-ISGVHIR-------------SHQILLQLKLVDAIKEA---GNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 ---~~d~v~~~-~~~~~~~-------------~~~~~~~~~l~~aa~~~---~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+ ++..... ..|+.+..++++++... + ..++|+ ||..... +..+...
T Consensus 103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~-----~~~~~~~ 176 (286)
T 1xu9_A 103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV-----AYPMVAA 176 (286)
T ss_dssp HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS-----CCTTCHH
T ss_pred HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc-----CCCCccH
Confidence 79999999 4543210 15677777777776542 2 246665 4433211 1122234
Q ss_pred hhhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 134 ~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|..+|..++.+.+. .++.+++++||.+..+...... . +.....+++.+|+|+.++
T Consensus 177 Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~---------~~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 177 YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV-------S---------GIVHMQAAPKEECALEII 240 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS-------C---------GGGGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc-------c---------ccccCCCCCHHHHHHHHH
Confidence 55599988776542 3788899999987665432110 0 011235689999999999
Q ss_pred HHhcCCc
Q 021470 205 KAINDPR 211 (312)
Q Consensus 205 ~~l~~~~ 211 (312)
.++..++
T Consensus 241 ~~~~~~~ 247 (286)
T 1xu9_A 241 KGGALRQ 247 (286)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 9987763
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.8e-17 Score=133.58 Aligned_cols=207 Identities=8% Similarity=0.040 Sum_probs=132.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~~ 76 (312)
.++++||||+|.||+++++.|+++|++|++++|+.... .+....+.. ...++..+++|++|.+++.++++ ++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST-AAVQQRIIA-SGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT-HHHHHHHHH-TTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999985543 221211111 24578899999999988887775 68
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
|++||+++..... ..|+.+..++++++ ++.+ ..++|. |+..... +..+...|..+
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~-----~~~~~~~Y~as 184 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR-----PKSVVTAYAAT 184 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-----CCTTBHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC-----CCCCchhhHHH
Confidence 9999999964321 16777777777776 4455 567775 5433221 11112235559
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..++.+.+. .++++..++||.+............ ... .............+...+|+|++++.++...
T Consensus 185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~-~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~ 260 (275)
T 4imr_A 185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD---PEG-WDEYVRTLNWMGRAGRPEEMVGAALFLASEA 260 (275)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC---HHH-HHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC---hHH-HHHHHhhcCccCCCcCHHHHHHHHHHHcCcc
Confidence 9998877653 4788899999988765332110000 000 0000000001123567999999999999765
Q ss_pred c--cCCceEEecC
Q 021470 211 R--TLNRTMYLRP 221 (312)
Q Consensus 211 ~--~~~~~~~~~~ 221 (312)
. ..|+.+.+.|
T Consensus 261 a~~itG~~i~vdG 273 (275)
T 4imr_A 261 CSFMTGETIFLTG 273 (275)
T ss_dssp GTTCCSCEEEESS
T ss_pred cCCCCCCEEEeCC
Confidence 3 2366777753
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=131.03 Aligned_cols=203 Identities=12% Similarity=0.039 Sum_probs=132.1
Q ss_pred CcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGY--LGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|+ ||+++++.|++.|++|+++.|+ ....+..+.+. ..++.++++|++|++++.++++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQG-----DALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCC-----HHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 468999999988 9999999999999999999998 33222222221 2468899999999999888875
Q ss_pred ---cCCEEEEcCCCCcc----c--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHI----R--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~----~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++.... . ..|+....++++++...- .-.++|+ |+...... ....
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----~~~~ 180 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-----MPNY 180 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----CTTT
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----CCch
Confidence 68999999997531 0 167788888888887643 0236665 44332211 1122
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++++..++||.+........... ...............+...+|+|++++
T Consensus 181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedvA~~v~ 254 (293)
T 3grk_A 181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF------RYILKWNEYNAPLRRTVTIDEVGDVGL 254 (293)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH------HHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch------HHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3455599998877653 478899999998876533221100 000000000011124678999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.... ..|+.+++.|
T Consensus 255 ~L~s~~~~~itG~~i~vdG 273 (293)
T 3grk_A 255 YFLSDLSRSVTGEVHHADS 273 (293)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHcCccccCCcceEEEECC
Confidence 9997643 2467777764
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=126.83 Aligned_cols=211 Identities=14% Similarity=0.037 Sum_probs=134.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC-----------CChHHHHHh-hhhc--cCCCeEEEccCCCHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG-----------VDIEKVQML-LSFK--EQGAKLVSGSFNDYQS 68 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~ 68 (312)
.++++||||+|.||+++++.|++.|++|++++|+... ...++.+.. +.+. ..++.++++|++|+++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 90 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA 90 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence 4789999999999999999999999999999987321 113333221 2222 3468899999999999
Q ss_pred HHHHhc-------cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCc
Q 021470 69 LVNAVK-------LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDP 121 (312)
Q Consensus 69 l~~~~~-------~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~ 121 (312)
+.++++ ++|++||+++..... +.|+.+..++++++... +.-.++|+ |+.....
T Consensus 91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (286)
T 3uve_A 91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK 170 (286)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence 988875 789999999964321 15777777777776543 21246665 5433221
Q ss_pred ccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCC-----CCCccCCCCCe---eEE--e
Q 021470 122 AKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLC-----QPGSILPSKDS---VVL--L 184 (312)
Q Consensus 122 ~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~--~ 184 (312)
. ......|..+|..++.+.+. .++++..+.||.+......... .... ..... ... .
T Consensus 171 ~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 243 (286)
T 3uve_A 171 A-----YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDL--ENPGPDDMAPICQM 243 (286)
T ss_dssp C-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTS--SSCCHHHHHHHHHT
T ss_pred C-----CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccc--cccchhhHHHHHHh
Confidence 1 11123455599998877653 5788999999998765432100 0000 00000 000 0
Q ss_pred CCCCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 185 GDGNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 185 ~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.. ..+..+.+.+|+|++++.++.... ..|+.+++.|
T Consensus 244 ~~-~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 281 (286)
T 3uve_A 244 FH-TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA 281 (286)
T ss_dssp TC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hh-ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence 11 111467899999999999997653 2367777764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2e-15 Score=124.76 Aligned_cols=208 Identities=9% Similarity=-0.001 Sum_probs=132.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD-----GERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 2222 2348899999999988888765
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... +.|+.+..++++++... + -.++|+ |+...... ....
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~ 156 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQP-----EPHM 156 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSC-----CTTB
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCC-----CCCc
Confidence 689999999975421 16777888888877543 3 345665 43222111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc-CCCCCee-EEeC--CCCcceeeeeHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI-LPSKDSV-VLLG--DGNPKAIYVDEDDIA 200 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~--~~~~~~~~v~~~D~a 200 (312)
..|..+|..++.+.+. .|+++..++||.+..+........... ....... .... .......+..++|+|
T Consensus 157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 236 (265)
T 3lf2_A 157 VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAA 236 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHH
Confidence 3444599998877653 478899999998876543221110000 0000000 0000 001123467899999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++.... ..|+.+.+.|
T Consensus 237 ~~v~fL~s~~~~~itG~~i~vdG 259 (265)
T 3lf2_A 237 RAILFLASPLSAYTTGSHIDVSG 259 (265)
T ss_dssp HHHHHHHSGGGTTCCSEEEEESS
T ss_pred HHHHHHhCchhcCcCCCEEEECC
Confidence 99999997543 2366677754
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.2e-16 Score=126.54 Aligned_cols=186 Identities=12% Similarity=-0.007 Sum_probs=127.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------- 74 (312)
+++++||||+|+||+++++.|+++|++|++++|+.... ......+++|++|++++.++++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc------------cCCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999984322 1235677899999988888765
Q ss_pred -cCCEEEEcCCCCcc----c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHI----R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~----~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||+++.... . +.|+....++++++...- .-.++|+ |+..... +..+...|..
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~Y~a 149 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-----GTPGMIGYGM 149 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----CCTTBHHHHH
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc-----CCCCchHHHH
Confidence 68999999996431 1 156777888888887652 0136665 5433211 1112234555
Q ss_pred hHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 137 DKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 137 ~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+|..++.+.+. .+++++.++||++.......... . .....+++.+|+|++++.++
T Consensus 150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~-------~---------~~~~~~~~~~~vA~~v~~l~ 213 (241)
T 1dhr_A 150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-------E---------ADFSSWTPLEFLVETFHDWI 213 (241)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-------T---------SCGGGSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc-------c---------hhhccCCCHHHHHHHHHHHh
Confidence 99999888764 24778889999876554322110 0 01124567899999999999
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.... ..|+.+.+.|
T Consensus 214 ~~~~~~~~G~~~~v~g 229 (241)
T 1dhr_A 214 TGNKRPNSGSLIQVVT 229 (241)
T ss_dssp TTTTCCCTTCEEEEEE
T ss_pred cCCCcCccceEEEEeC
Confidence 7653 2366666654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-16 Score=129.07 Aligned_cols=207 Identities=13% Similarity=0.037 Sum_probs=132.9
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+ |.||+++++.|++.|++|++++|+......+..+.+......++.++++|++|++++.++++
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 5789999999 89999999999999999999988754321111211121224678899999999998888775
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... +.|+.+..++++++ ++.+ ..++|+ |+....... ...+...|
T Consensus 100 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---~~~~~~~Y 175 (267)
T 3gdg_A 100 GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIAN---FPQEQTSY 175 (267)
T ss_dssp SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC---SSSCCHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccC---CCCCCCcc
Confidence 579999999975421 15677777777776 4555 456665 442221111 00112345
Q ss_pred hhhHHHHHHHHHH----h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 135 FDDKMVVRKAIED----A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 135 ~~~K~~~e~~~~~----~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
..+|..++.+.+. . .+.+..+.||.+.......... .....+........+.+++|+|++++.++.
T Consensus 176 ~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~r~~~~~dva~~~~~l~s 247 (267)
T 3gdg_A 176 NVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPK--------ETQQLWHSMIPMGRDGLAKELKGAYVYFAS 247 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCH--------HHHHHHHTTSTTSSCEETHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCH--------HHHHHHHhcCCCCCCcCHHHHHhHhheeec
Confidence 5599998887764 2 2567778898876543322110 000111112223456789999999999997
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+++.|
T Consensus 248 ~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 248 DASTYTTGADLLIDG 262 (267)
T ss_dssp TTCTTCCSCEEEEST
T ss_pred CccccccCCEEEECC
Confidence 642 2367777753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.2e-16 Score=130.17 Aligned_cols=199 Identities=13% Similarity=0.165 Sum_probs=131.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.++++||||+|.||+++++.|++.|+ +|+++.|+ .++.+.+ +.+. ..++.++++|++|++++.++++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 107 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-----LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE 107 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence 47899999999999999999999987 99999998 5544322 2222 3467889999999999998876
Q ss_pred -------cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCccccccc
Q 021470 75 -------LVDVVICAISGVHI-R--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 75 -------~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~ 127 (312)
++|++||+++.... . +.|+.+..++++++ ++.+ ..++|. |+......
T Consensus 108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~----- 181 (287)
T 3rku_A 108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDA----- 181 (287)
T ss_dssp TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC-----
T ss_pred HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCC-----
Confidence 58999999996431 0 16777777777777 4455 567775 44332111
Q ss_pred CCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
..+...|..+|..++.+.+. .|+++..++||.+...+....... .......... ...++.++|+|
T Consensus 182 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~----~~~p~~pedvA 253 (287)
T 3rku_A 182 YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG----NEEQAKNVYK----DTTPLMADDVA 253 (287)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT----CHHHHHHHHT----TSCCEEHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC----cHHHHHHhhc----ccCCCCHHHHH
Confidence 11223455599998877653 478899999998876542111100 0000000000 01234899999
Q ss_pred HHHHHHhcCCcc--CCceEEec
Q 021470 201 MYTMKAINDPRT--LNRTMYLR 220 (312)
Q Consensus 201 ~~~~~~l~~~~~--~~~~~~~~ 220 (312)
++++.++..+.. .++.+.+.
T Consensus 254 ~~v~~l~s~~~~~i~g~~i~v~ 275 (287)
T 3rku_A 254 DLIVYATSRKQNTVIADTLIFP 275 (287)
T ss_dssp HHHHHHHTSCTTEEEEEEEEEE
T ss_pred HHHHHHhCCCCCeEecceEEee
Confidence 999999987643 25555654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.7e-16 Score=126.39 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=123.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEEEccC--CCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLVSGSF--NDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v~~D~--~d~~~l~~~~~-- 74 (312)
.++++||||+|+||+++++.|+++|++|++++|+ +++.+.. +.+ ...+..++.+|+ .|.+++.++++
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT-----EASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC-----HHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5444322 222 225678888888 88888877665
Q ss_pred -----cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCC
Q 021470 75 -----LVDVVICAISGVHIR---------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
++|++||+++..... +.|+.+..++++++. +.+ ..++|+ |+...... ..
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~ 162 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKG-----RA 162 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSC-----CT
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCC-----CC
Confidence 689999999964211 167777888888774 344 467775 44222111 11
Q ss_pred CCCchhhhHHHHHHHHHH--------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED--------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~--------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+...|..+|..++.+.+. .++++..+.||.+.......... ......+...+|+|+
T Consensus 163 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~----------------~~~~~~~~~p~dva~ 226 (247)
T 3i1j_A 163 NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP----------------DENPLNNPAPEDIMP 226 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST----------------TSCGGGSCCGGGGTH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc----------------ccCccCCCCHHHHHH
Confidence 223455599998877653 35667788999876654322111 011224567899999
Q ss_pred HHHHHhcCC
Q 021470 202 YTMKAINDP 210 (312)
Q Consensus 202 ~~~~~l~~~ 210 (312)
+++.++...
T Consensus 227 ~~~~l~s~~ 235 (247)
T 3i1j_A 227 VYLYLMGPD 235 (247)
T ss_dssp HHHHHHSGG
T ss_pred HHHHHhCch
Confidence 999998754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9e-16 Score=127.94 Aligned_cols=205 Identities=14% Similarity=0.048 Sum_probs=135.1
Q ss_pred CcEEEEEcCCch--hhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGY--LGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+|+ ||+++++.|+++|++|++++|+. . .++.+.+... ..++.++++|++|++++.++++
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~-~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--F-KDRVEKLCAE-FNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--C-HHHHHHHHGG-GCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--H-HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 478999999977 99999999999999999999985 1 2344332221 2468999999999999888875
Q ss_pred -cCCEEEEcCCCCcc----------c---------cchhHhHHHHHHHHHHhC--CCceeec-CCCCCCcccccccCCCC
Q 021470 75 -LVDVVICAISGVHI----------R---------SHQILLQLKLVDAIKEAG--NVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 -~~d~v~~~~~~~~~----------~---------~~~~~~~~~l~~aa~~~~--~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++.... . +.|+....++++++...- ...++|+ |+...... ..+.
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~ 176 (280)
T 3nrc_A 102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-----MPSY 176 (280)
T ss_dssp SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-----CTTT
T ss_pred CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-----CCCc
Confidence 57999999997532 1 156777888888877541 0246664 44322111 1222
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++++..++||.+............ ..............+.+++|+|++++
T Consensus 177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~~~~~pedvA~~v~ 250 (280)
T 3nrc_A 177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFK------KMLDYNAMVSPLKKNVDIMEVGNTVA 250 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHH------HHHHHHHHHSTTCSCCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchH------HHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3455599998877653 5789999999998765443221100 00000000011224678999999999
Q ss_pred HHhcCCc--cCCceEEecCC
Q 021470 205 KAINDPR--TLNRTMYLRPP 222 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~~ 222 (312)
.++.... ..|+.+++.|.
T Consensus 251 ~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 251 FLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp HTTSGGGTTCCSCEEEESTT
T ss_pred HHhCcccCCcCCcEEEECCC
Confidence 9987643 34677777643
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.8e-16 Score=130.79 Aligned_cols=219 Identities=13% Similarity=0.068 Sum_probs=136.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC-------hHHHHH-hhhh--ccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-------IEKVQM-LLSF--KEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~-~~~l--~~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++++||||+|+||+++++.|+++|++|++++|+..... .++.+. ...+ ...++.++++|++|++++.++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 478999999999999999999999999999998732210 112111 1112 235788999999999998887
Q ss_pred hc-------cCCEEEEcCCCCccc------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccc-----cc
Q 021470 73 VK-------LVDVVICAISGVHIR------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKM-----AN 126 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~-----~~ 126 (312)
++ ++|++||+++..... +.|+.++.++++++...- .-.++|+ |+........ ..
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~ 169 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGG 169 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccc
Confidence 76 789999999975421 267888899999887652 0235664 4422111000 00
Q ss_pred cCCCC-CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCC-----CCCccCCCCC--eeEEeCCCCcce
Q 021470 127 AMEPG-RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLC-----QPGSILPSKD--SVVLLGDGNPKA 191 (312)
Q Consensus 127 ~~~p~-~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~ 191 (312)
...|. ..|..+|..++.+.+. .++++..++||.+......... .......... ..........+.
T Consensus 170 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (287)
T 3pxx_A 170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPT 249 (287)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSC
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCC
Confidence 01112 2344599998877653 4899999999998765433110 0000000000 000001111124
Q ss_pred eeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 192 IYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 192 ~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.+.+++|+|++++.++.... ..|+.+++.|
T Consensus 250 ~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG 281 (287)
T 3pxx_A 250 PYVEASDISNAVCFLASDESRYVTGLQFKVDA 281 (287)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence 68899999999999997643 2367777764
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.1e-16 Score=129.09 Aligned_cols=213 Identities=11% Similarity=0.002 Sum_probs=134.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC-------CChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG-------VDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++++||||+|.||+++++.|++.|++|++++|+... ...++.+ ..+.+. ..++.++++|++|++++.++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 4789999999999999999999999999999987321 1123322 112222 35688999999999998887
Q ss_pred hc-------cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCccccc
Q 021470 73 VK-------LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~ 125 (312)
++ ++|++||+++..... +.|+.+..++++++... +...++|+ |+......
T Consensus 108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~--- 184 (299)
T 3t7c_A 108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG--- 184 (299)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC---
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC---
Confidence 75 689999999964321 16777777777776543 21356665 54332211
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc--CCCCCeeEE------eCCCCcc
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI--LPSKDSVVL------LGDGNPK 190 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~ 190 (312)
......|..+|..++.+.+. .|+++..++||.+.............. ......... ... ..+
T Consensus 185 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p 261 (299)
T 3t7c_A 185 --AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH-VLP 261 (299)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS-SSS
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc-ccC
Confidence 11223455599998877653 478899999999876543211000000 000000000 000 111
Q ss_pred eeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 191 AIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
..+..++|+|++++.++.... ..|+.+++.|
T Consensus 262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDG 294 (299)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence 357799999999999997653 2367777764
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=4.2e-15 Score=123.67 Aligned_cols=213 Identities=11% Similarity=-0.017 Sum_probs=132.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC--------CChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG--------VDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.++++||||+|.||+++++.|+++|++|++++|+... ...++.+. .+.+. ...+..+++|++|++++.+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 4789999999999999999999999999999984211 01333322 12222 3568889999999999888
Q ss_pred Hhc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCccccc
Q 021470 72 AVK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~ 125 (312)
+++ ++|++||+++..... +.|+.++.++++++.. .+.-.++|+ ||......
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--- 167 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM--- 167 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---
Confidence 775 589999999975431 1567777777776543 331246665 54332211
Q ss_pred ccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCcc---CCCCCeeEEeCCCCcceeeee
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSI---LPSKDSVVLLGDGNPKAIYVD 195 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~ 195 (312)
......|..+|..++.+.+. .++++..++||.+.............. ............ ..+..+.+
T Consensus 168 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~ 244 (277)
T 3tsc_A 168 --QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP-FLPDWVAE 244 (277)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC-SSSCSCBC
T ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh-ccCCCCCC
Confidence 11123455599998877763 478899999999876543210000000 000000000000 11124778
Q ss_pred HHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 196 EDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++|+|++++.++.++. ..|+.+++.|
T Consensus 245 pedvA~~v~~L~s~~~~~itG~~i~vdG 272 (277)
T 3tsc_A 245 PEDIADTVCWLASDESRKVTAAQIPVDQ 272 (277)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHHhCccccCCcCCEEeeCC
Confidence 9999999999997653 2367777754
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.6e-16 Score=132.61 Aligned_cols=213 Identities=10% Similarity=0.026 Sum_probs=134.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCC-------ChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-------DIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++++||||+|+||+++++.|+++|++|++++|+.... ..++... .+.+. ...+.++++|++|++++.++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 47899999999999999999999999999998863211 1222221 12222 34688999999999998888
Q ss_pred hc-------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccc
Q 021470 73 VK-------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 73 ~~-------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++ ++|++||+++..... +.|+.++.++++++.. .+.-.++|+ ||......
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~---- 201 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG---- 201 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC----
Confidence 76 689999999975421 2677777777777643 221245664 44322111
Q ss_pred cCCCCCchhhhHHHHHHHHHH-------hCCCeEEEeccccccccccc------CCCCCccCCCCC-eeEEe-CCCCcce
Q 021470 127 AMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGG------LCQPGSILPSKD-SVVLL-GDGNPKA 191 (312)
Q Consensus 127 ~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~-~~~~~~~ 191 (312)
......|..+|..++.+.+. .|+++..++||.+....... +.... ...... ....+ .....+.
T Consensus 202 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~ 279 (317)
T 3oec_A 202 -APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL-ENPTREDAAELFSQLTLLPI 279 (317)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTC-SSCCHHHHHHHHTTTCSSSS
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhc-cccchhHHHHHHhhhccCCC
Confidence 11123455599998877653 47889999999987653211 00000 000000 00000 0111125
Q ss_pred eeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 192 IYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 192 ~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.+++++|+|++++.++.... ..|+.+++.|
T Consensus 280 ~~~~pedvA~av~fL~s~~a~~itG~~i~vdG 311 (317)
T 3oec_A 280 PWVEPEDVSNAVAWLASDEARYIHGAAIPVDG 311 (317)
T ss_dssp SSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence 68899999999999987643 2467777764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-16 Score=133.05 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=135.9
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++|+||||+ |+||++++++|+++|++|++++|+... .++.+.+.. ...++.++++|++|++++.++++
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF--KDRITEFAA-EFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh--HHHHHHHHH-HcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5799999999 999999999999999999999998321 222222111 12358999999999999888876
Q ss_pred -cCCEEEEcCCCCcc----------c---------cchhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHI----------R---------SHQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~----------~---------~~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . ..|+.+..++++++...-. -.++|+ |+...... ..+..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~ 165 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-----IPNYN 165 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----CTTTT
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-----CCCcc
Confidence 57999999986532 1 1567778888888876420 125554 44332211 12223
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|..+|..++.+.+. .++++..++||.+........... ...............+.+++|+|++++.
T Consensus 166 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~pedva~~i~~ 239 (271)
T 3ek2_A 166 TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF------GKILDFVESNSPLKRNVTIEQVGNAGAF 239 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH------HHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch------HHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 455599998877653 478999999998876543221100 0000000001112246789999999999
Q ss_pred HhcCCc--cCCceEEecCCCCcCCHHHHHH
Q 021470 206 AINDPR--TLNRTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~~~~~~s~~e~~~ 233 (312)
++.... ..|+.+++.| +..+++.++++
T Consensus 240 l~s~~~~~~tG~~i~vdg-G~~~~~~~~~~ 268 (271)
T 3ek2_A 240 LLSDLASGVTAEVMHVDS-GFNAVVGGMAG 268 (271)
T ss_dssp HHSGGGTTCCSEEEEEST-TGGGBCCCC--
T ss_pred HcCcccCCeeeeEEEECC-Ceeeehhhhhh
Confidence 997642 3467777764 44666655543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=127.67 Aligned_cols=204 Identities=10% Similarity=-0.012 Sum_probs=131.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhcc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKL----- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~----- 75 (312)
.++++||||+|.||+++++.|+++|++|+++.++... ...+....+. ...+..+.+|++|.+++.++++.
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE---EAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSH---HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchH---HHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999987554321 1122223332 34577889999999888877652
Q ss_pred --------CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh--CCCceeec-CCCCCCcccccccCCC
Q 021470 76 --------VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA--GNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 76 --------~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~--~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
+|++||+++..... ..|+.+..++++++... + -.++|+ |+...... ...
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~ 157 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRIS-----LPD 157 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGTSC-----CTT
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCEEEEeCChhhccC-----CCC
Confidence 89999999975421 15777788888888754 2 235665 54332111 111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .++++..++||.+............ ..............+.+++|+|+++
T Consensus 158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~ 231 (255)
T 3icc_A 158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP------MMKQYATTISAFNRLGEVEDIADTA 231 (255)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH------HHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH------HHHHhhhccCCcCCCCCHHHHHHHH
Confidence 23444599998877653 4789999999988765433221100 0000011111223567899999999
Q ss_pred HHHhcCCc--cCCceEEecC
Q 021470 204 MKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~ 221 (312)
..++.... ..|+.+++.|
T Consensus 232 ~~l~s~~~~~~tG~~i~vdg 251 (255)
T 3icc_A 232 AFLASPDSRWVTGQLIDVSG 251 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHhCcccCCccCCEEEecC
Confidence 99987542 3467777754
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=7e-16 Score=126.09 Aligned_cols=189 Identities=17% Similarity=0.190 Sum_probs=114.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHH---HHh---ccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLV---NAV---KLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~---~~~---~~~ 76 (312)
.++++||||+|+||+++++.|++ |++|++++|+ +++.+.... ..++.++.+|+.+.+... +.+ .++
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~-----~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRN-----PEHLAALAE--IEGVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHHHT--STTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHh--hcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999987 9999999998 655543333 357889999998875421 122 268
Q ss_pred CEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhhh
Q 021470 77 DVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDD 137 (312)
Q Consensus 77 d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~ 137 (312)
|++||+++..... +.|+.+..++++++. +.+ .++|+ |+...... ..+...|..+
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~-----~~~~~~Y~as 149 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGP-----HPGNTIYAAS 149 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC---------------CHHHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccC-----CCCchHHHHH
Confidence 9999999975421 156666555555553 334 45654 44322111 1122345559
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..++.+.+. .++++..++||.+........... .. .......+++++|+|++++.+++.+
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~-------~~~~~~~~~~p~dvA~~i~~l~~~~ 217 (245)
T 3e9n_A 150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS-----QG-------TNFRPEIYIEPKEIANAIRFVIDAG 217 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh-----hh-------cccccccCCCHHHHHHHHHHHHcCC
Confidence 9998877763 578999999998876644322111 00 0111235789999999999999887
Q ss_pred ccCCceEEe
Q 021470 211 RTLNRTMYL 219 (312)
Q Consensus 211 ~~~~~~~~~ 219 (312)
. .+.++++
T Consensus 218 ~-~~~~~~i 225 (245)
T 3e9n_A 218 E-TTQITNV 225 (245)
T ss_dssp T-TEEEEEE
T ss_pred C-ccceeee
Confidence 5 3445554
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.9e-15 Score=118.73 Aligned_cols=193 Identities=13% Similarity=0.111 Sum_probs=126.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|+ |+|+||||++.||+++++.|++.|++|.+.+|+ .++.+.... ...++..+++|++|++++.++++
T Consensus 1 Mn-K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 73 (247)
T 3ged_A 1 MN-RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID-----EKRSADFAK-ERPNLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -C-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHT-TCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH-hcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 65 899999999999999999999999999999998 555533222 23568899999999988888764
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CC-CCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SE-FGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~ 133 (312)
++|+++|+|+..... +.|+.+...+.+++. +.+ -++|. || .+... .|...
T Consensus 74 g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~~-------~~~~~ 144 (247)
T 3ged_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQS-------EPDSE 144 (247)
T ss_dssp SCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTSC-------CTTCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccccC-------CCCCH
Confidence 689999999865431 156666655555554 333 35554 44 33221 12234
Q ss_pred -hhhhHHHHHHHHHH------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 -TFDDKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 -~~~~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..+..+.+. .++++..|.||++.......+... .. ..-....+...+|+|.+++.+
T Consensus 145 ~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~--------~~----~~~Pl~R~g~pediA~~v~fL 212 (247)
T 3ged_A 145 AYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQE--------DC----AAIPAGKVGTPKDISNMVLFL 212 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHH--------HH----HTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHH--------HH----hcCCCCCCcCHHHHHHHHHHH
Confidence 44499998766653 367788888987743321111000 00 000112356789999999999
Q ss_pred hcCCccCCceEEecC
Q 021470 207 INDPRTLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~~~~~~~~~~~ 221 (312)
++..--.|+.+.+.|
T Consensus 213 ~s~~~iTG~~i~VDG 227 (247)
T 3ged_A 213 CQQDFITGETIIVDG 227 (247)
T ss_dssp HHCSSCCSCEEEEST
T ss_pred HhCCCCCCCeEEECc
Confidence 976433467777753
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=128.60 Aligned_cols=187 Identities=13% Similarity=0.038 Sum_probs=126.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.++++||||+|+||+++++.|+++|++|++++|+ . . +|++|++++.++++ ++|++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~-----~-----------~------~D~~~~~~v~~~~~~~g~id~l 63 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQ-----T-----------G------LDISDEKSVYHYFETIGAFDHL 63 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGG-----G-----------T------CCTTCHHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCC-----c-----------c------cCCCCHHHHHHHHHHhCCCCEE
Confidence 4789999999999999999999999999999987 1 1 89999999998876 68999
Q ss_pred EEcCCCCccc---------------cchhHhHHHHHHHHHHhCCC--ceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 80 ICAISGVHIR---------------SHQILLQLKLVDAIKEAGNV--KRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 80 ~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~~v--~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
||+++..... +.|+.++.++++++...- . .++|+ |+...... ..+...|..+|..+
T Consensus 64 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~-----~~~~~~Y~asK~a~ 137 (223)
T 3uce_A 64 IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYL-KQGGSITLTSGMLSRKV-----VANTYVKAAINAAI 137 (223)
T ss_dssp EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGE-EEEEEEEEECCGGGTSC-----CTTCHHHHHHHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhc-cCCeEEEEecchhhccC-----CCCchHHHHHHHHH
Confidence 9999965210 167788888888887652 2 25664 54332211 12223455599998
Q ss_pred HHHHHH----h-CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCce
Q 021470 142 RKAIED----A-GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRT 216 (312)
Q Consensus 142 e~~~~~----~-~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~ 216 (312)
+.+.+. . .+++..++||.+............ ................+.+++|+|++++.+++.+...|+.
T Consensus 138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~~ 213 (223)
T 3uce_A 138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADD----RDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGTV 213 (223)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHH----HHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSCE
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhh----HHHHHHHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCcE
Confidence 877653 2 377888899988765443221100 0000000001112235678999999999999865555777
Q ss_pred EEecC
Q 021470 217 MYLRP 221 (312)
Q Consensus 217 ~~~~~ 221 (312)
+++.|
T Consensus 214 i~vdg 218 (223)
T 3uce_A 214 IDVDG 218 (223)
T ss_dssp EEEST
T ss_pred EEecC
Confidence 88764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=5.5e-15 Score=126.46 Aligned_cols=197 Identities=12% Similarity=0.025 Sum_probs=129.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCCh---HHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI---EKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|.||+++++.|+++|++|++++|+...... .-....+.+. ..++.++++|++|++++.++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998654210 0001112222 3467889999999999888876
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... ++|+.++.++++++.. .+ ..++|+ |+....... +..+.
T Consensus 125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~---~~~~~ 200 (346)
T 3kvo_A 125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV---WFKQH 200 (346)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG---GTSSS
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC---CCCCc
Confidence 799999999975421 2678888888888754 34 467775 543322111 11222
Q ss_pred CchhhhHHHHHHHHHH------hCCCeEEEeccc-ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED------AGIPFTYVSANC-FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~------~~~~~~i~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++.+..+.||. +.......+.. ......+...+|+|++++
T Consensus 201 ~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~~----------------~~~~~r~~~pedvA~~v~ 264 (346)
T 3kvo_A 201 CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLGG----------------PGIESQCRKVDIIADAAY 264 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHCC------------------CGGGCBCTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhcc----------------ccccccCCCHHHHHHHHH
Confidence 3455599998877653 367888899995 33322221100 011234568999999999
Q ss_pred HHhcCCccCCceEEe
Q 021470 205 KAINDPRTLNRTMYL 219 (312)
Q Consensus 205 ~~l~~~~~~~~~~~~ 219 (312)
.++.......+.+.+
T Consensus 265 ~L~s~~~~itG~~iv 279 (346)
T 3kvo_A 265 SIFQKPKSFTGNFVI 279 (346)
T ss_dssp HHHTSCTTCCSCEEE
T ss_pred HHHhcCCCCCceEEE
Confidence 999874433444334
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=6.8e-16 Score=129.65 Aligned_cols=205 Identities=18% Similarity=0.076 Sum_probs=132.8
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.++++||||+| +||+++++.|++.|++|++++|+... .+....... ....+.++++|++|++++.++++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETF--KKRVDPLAE-SLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHHHHH-HHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHH-hcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 47899999998 99999999999999999999998321 112211111 12457899999999999888875
Q ss_pred -cCCEEEEcCCCCcc-------c-----------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHI-------R-----------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~-------~-----------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++.... . ..|+.+..++++++...- .-.++|+ |+...... ......
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-----~~~~~~ 181 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-----VPHYNV 181 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----CTTTTH
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----CCCchh
Confidence 68999999997531 0 167778888888887653 0135664 44332211 112234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .++++..++||.+............ ..............+...+|+|++++.+
T Consensus 182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~p~~r~~~pedvA~~v~fL 255 (296)
T 3k31_A 182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFH------YILTWNKYNSPLRRNTTLDDVGGAALYL 255 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHH------HHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchH------HHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 55599998877653 4788999999988764332110000 0000000001112456889999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... ..|+.+++.|
T Consensus 256 ~s~~a~~itG~~i~vdG 272 (296)
T 3k31_A 256 LSDLGRGTTGETVHVDC 272 (296)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred cCCccCCccCCEEEECC
Confidence 98642 2467777764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-16 Score=129.82 Aligned_cols=206 Identities=10% Similarity=0.013 Sum_probs=121.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHH----hccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNA----VKLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~----~~~~ 76 (312)
|++++||||+|+||+++++.|+++|++|++++|+.. +.+....+. ...+..+ |..+.+.+.+. +.++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-----QKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG-----SHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999733 222212122 2233333 66554433332 3379
Q ss_pred CEEEEcCCCC-ccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 77 DVVICAISGV-HIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 77 d~v~~~~~~~-~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
|++||+++.. ... +.|+.+..++++++. +.+ ..++|+ |+...... ..+...|..
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-----~~~~~~Y~~ 147 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP-----WKELSTYTS 147 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC-----CTTCHHHHH
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccC-----CCCchHHHH
Confidence 9999999975 211 156667777766664 445 567775 54332211 112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .+++++.++||.+.+.....+....+...................+.+.+|+|++++.++..
T Consensus 148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 227 (254)
T 1zmt_A 148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 48999999999985432211110000000000000000000112367899999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
+. ..|+.+.+.|
T Consensus 228 ~~~~~tG~~~~vdg 241 (254)
T 1zmt_A 228 SCDYLTGQVFWLAG 241 (254)
T ss_dssp SCGGGTTCEEEEST
T ss_pred ccCCccCCEEEECC
Confidence 53 2466777754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-15 Score=122.35 Aligned_cols=195 Identities=11% Similarity=0.013 Sum_probs=121.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|+.++++||||+|+||+++++.|+++|++|++++|+ +++.+. .+.+. ..++.++++|++|++++.++++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH-----LDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 456889999999999999999999999999999998 444432 12222 3457889999999988877654
Q ss_pred -----cCCEEEEcCC--CC-------c-cc-----------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCccc
Q 021470 75 -----LVDVVICAIS--GV-------H-IR-----------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAK 123 (312)
Q Consensus 75 -----~~d~v~~~~~--~~-------~-~~-----------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~ 123 (312)
++|++||+++ .. . .. ..|+.....+.+++. +.+ ..++|+ |+......
T Consensus 78 ~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~- 155 (260)
T 2qq5_A 78 REQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY- 155 (260)
T ss_dssp HHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC-
T ss_pred HhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC-
Confidence 4699999994 21 1 00 145555555555443 445 567775 55332211
Q ss_pred ccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCC-CCcceeeee
Q 021470 124 MANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGD-GNPKAIYVD 195 (312)
Q Consensus 124 ~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ 195 (312)
.+...|..+|..++.+.+. .++++..++||.+..+........ ........... ......+..
T Consensus 156 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T 2qq5_A 156 -----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAK----EEVLQDPVLKQFKSAFSSAET 226 (260)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHH
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcc----ccccchhHHHHHHhhhccCCC
Confidence 1223455599998887653 489999999998876543221110 00000000000 000112357
Q ss_pred HHHHHHHHHHHhcCCc
Q 021470 196 EDDIAMYTMKAINDPR 211 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~ 211 (312)
.+|+|++++.++..+.
T Consensus 227 pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 227 TELSGKCVVALATDPN 242 (260)
T ss_dssp HHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHhcCcc
Confidence 8999999999998763
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-15 Score=124.89 Aligned_cols=201 Identities=11% Similarity=0.063 Sum_probs=129.4
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc---cCCCeEEEccCCC----HHHHHHHh
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK---EQGAKLVSGSFND----YQSLVNAV 73 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~---~~~~~~v~~D~~d----~~~l~~~~ 73 (312)
+.++++||||+|+||+++++.|+++|++|++++|+. .++.+. .+.+. ..++.++++|++| ++++.+++
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~----~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS----AEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC----HHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCc----hHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence 357899999999999999999999999999999983 133321 12222 3468899999999 88888776
Q ss_pred c-------cCCEEEEcCCCCcc---------c---------------cchhHhHHHHHHHHHHhC---C------Cceee
Q 021470 74 K-------LVDVVICAISGVHI---------R---------------SHQILLQLKLVDAIKEAG---N------VKRFL 113 (312)
Q Consensus 74 ~-------~~d~v~~~~~~~~~---------~---------------~~~~~~~~~l~~aa~~~~---~------v~~~v 113 (312)
+ ++|++||+++.... . ..|+.+...+++++...- . ..++|
T Consensus 98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv 177 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV 177 (288)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence 5 68999999986421 1 145666777777766542 0 23666
Q ss_pred c-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeC
Q 021470 114 P-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG 185 (312)
Q Consensus 114 ~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (312)
+ |+...... ..+...|..+|..++.+.+. .++++..++||.+..+. . ... . .... +.
T Consensus 178 ~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~-~----~~~~---~~ 242 (288)
T 2x9g_A 178 NLCDAMVDQP-----CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGE-E----EKDK---WR 242 (288)
T ss_dssp EECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCH-H----HHHH---HH
T ss_pred EEecccccCC-----CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cCh-H----HHHH---HH
Confidence 5 44332211 11223455599988777653 47889999999887654 2 100 0 0000 00
Q ss_pred CCCcceee-eeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 186 DGNPKAIY-VDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 186 ~~~~~~~~-v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.......+ .+.+|+|++++.++.... ..|+.+.+.|
T Consensus 243 ~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 281 (288)
T 2x9g_A 243 RKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDG 281 (288)
T ss_dssp HTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence 00011124 689999999999997642 2356666654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-14 Score=119.57 Aligned_cols=188 Identities=11% Similarity=0.028 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCCh---HHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhc--
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDI---EKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
+.++++||||+|.||+++++.|+++|++|++++|+...... .-.+..+.+ ...++.++++|++|++++.++++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999998643210 000111111 14567889999999998888775
Q ss_pred -----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.+...+++++.. .+ ..++|+ |+....... . ..+
T Consensus 85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-~--~~~ 160 (274)
T 3e03_A 85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPA-W--WGA 160 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHH-H--HHH
T ss_pred HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC-C--CCC
Confidence 689999999975321 1677777777777654 34 456775 443322210 0 011
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEeccc-ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANC-FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
...|..+|..++.+.+. .|+++..+.||. +........ . ......+...+|+|++
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~--------~---------~~~~~~~~~pedvA~~ 223 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML--------P---------GVDAAACRRPEIMADA 223 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------------CCCGGGSBCTHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc--------c---------cccccccCCHHHHHHH
Confidence 23455599998877653 478999999994 333222100 0 0112236689999999
Q ss_pred HHHHhcCC
Q 021470 203 TMKAINDP 210 (312)
Q Consensus 203 ~~~~l~~~ 210 (312)
++.++..+
T Consensus 224 v~~l~s~~ 231 (274)
T 3e03_A 224 AHAVLTRE 231 (274)
T ss_dssp HHHHHTSC
T ss_pred HHHHhCcc
Confidence 99999765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-15 Score=133.02 Aligned_cols=208 Identities=13% Similarity=0.137 Sum_probs=138.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhccC---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLV--- 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~--- 76 (312)
.++++||||+|+||.++++.|+++|++ |++++|+.... +...+..+.+. ..++.++.+|++|++++.++++.+
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 478999999999999999999999984 99999984321 11111222333 345788999999999999998764
Q ss_pred ---CEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 77 ---DVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 77 ---d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
|+|||+++..... ..|+.++.++.+++...+ ..+||+ ||....... .....|..+|
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~-----~g~~~Yaaak 378 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-----PGLGGYAPGN 378 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-----TTCTTTHHHH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCC-----CCCHHHHHHH
Confidence 9999999975431 157889999999998877 788875 542211110 1124565699
Q ss_pred HHHHHHHH---HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCc
Q 021470 139 MVVRKAIE---DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNR 215 (312)
Q Consensus 139 ~~~e~~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~ 215 (312)
..++.+.+ ..|+++++++||.+.+..+.. .. ....+. ...+.+++.+|+++++..++..+.. .
T Consensus 379 a~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~--~~--------~~~~~~--~~g~~~i~~e~~a~~l~~~l~~~~~--~ 444 (486)
T 2fr1_A 379 AYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE--GP--------VADRFR--RHGVIEMPPETACRALQNALDRAEV--C 444 (486)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTCS--S
T ss_pred HHHHHHHHHHHhcCCeEEEEECCeeCCCcccc--hh--------HHHHHH--hcCCCCCCHHHHHHHHHHHHhCCCC--e
Confidence 88876654 468999999999876542110 00 000011 1235678999999999999987642 2
Q ss_pred eEEecCCCCcCCHHHHHHHHH
Q 021470 216 TMYLRPPKNILSQREVVETWE 236 (312)
Q Consensus 216 ~~~~~~~~~~~s~~e~~~~~~ 236 (312)
+.+. .+.+..+...+.
T Consensus 445 -~~v~----~~d~~~~~~~~~ 460 (486)
T 2fr1_A 445 -PIVI----DVRWDRFLLAYT 460 (486)
T ss_dssp -CEEC----EECHHHHHHHHT
T ss_pred -EEEE----eCCHHHHhhhhc
Confidence 2332 356776665544
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=4.4e-15 Score=126.38 Aligned_cols=199 Identities=11% Similarity=0.023 Sum_probs=130.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEE-CCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHH----------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLH-RPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQ---------- 67 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~---------- 67 (312)
.++++||||+|+||+++++.|++.|++|++++ |+ +++.+.. +.+. ..++.++++|++|++
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence 46899999999999999999999999999999 87 4444322 2222 346889999999988
Q ss_pred -------HHHHHhc-------cCCEEEEcCCCCccc----------------------------cchhHhHHHHHHHHHH
Q 021470 68 -------SLVNAVK-------LVDVVICAISGVHIR----------------------------SHQILLQLKLVDAIKE 105 (312)
Q Consensus 68 -------~l~~~~~-------~~d~v~~~~~~~~~~----------------------------~~~~~~~~~l~~aa~~ 105 (312)
++.++++ ++|++||+|+..... ..|+.+..++++++..
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 200 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 200 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887765 789999999864311 1456666666666653
Q ss_pred ----hCC-----Cceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccC
Q 021470 106 ----AGN-----VKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGL 168 (312)
Q Consensus 106 ----~~~-----v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~ 168 (312)
.+. ..++|+ |+...... ..+...|..+|..++.+.+. .++.+..++||.+.... ...
T Consensus 201 ~m~~~~~~~~~~~g~IV~isS~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~ 274 (328)
T 2qhx_A 201 RVAGTPAKHRGTNYSIINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP 274 (328)
T ss_dssp HHHHSCGGGSCSCEEEEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC
T ss_pred HHHhcCCcCCCCCcEEEEECchhhccC-----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc
Confidence 220 246665 54332211 11223455599998877653 47889999999887654 211
Q ss_pred CCCCccCCCCCeeEEeCCCCcce-eeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 169 CQPGSILPSKDSVVLLGDGNPKA-IYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.. . . .. +....... .+.+.+|+|++++.++..+. ..|+.+.+.|
T Consensus 275 ~~--~--~--~~---~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 321 (328)
T 2qhx_A 275 PA--V--W--EG---HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 321 (328)
T ss_dssp HH--H--H--HH---HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HH--H--H--HH---HHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 00 0 0 00 00001111 36789999999999997542 2466777754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=122.14 Aligned_cols=189 Identities=10% Similarity=0.029 Sum_probs=124.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc---cCCCeEEEccCCCH-HHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK---EQGAKLVSGSFNDY-QSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~---~~~~~~v~~D~~d~-~~l~~~~~--- 74 (312)
.++|+||||+|+||+++++.|+++|++|++++|+ .++.+ ..+.+. ..++.++++|++|+ +++.++++
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD-----VTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998 54432 222232 24688999999997 77766654
Q ss_pred ----cCCEEEEcCCCCcc--------------------------------------------ccchhHhHHHHHHHHHH-
Q 021470 75 ----LVDVVICAISGVHI--------------------------------------------RSHQILLQLKLVDAIKE- 105 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~--------------------------------------------~~~~~~~~~~l~~aa~~- 105 (312)
++|++||+||.... -.+|+.++.++++++..
T Consensus 87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (311)
T 3o26_A 87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPL 166 (311)
T ss_dssp HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHh
Confidence 79999999997521 12577777777777653
Q ss_pred ---hCCCceeec-CCCCCCcccc-------------------------------------cccCCCCC-chhhhHHHHHH
Q 021470 106 ---AGNVKRFLP-SEFGTDPAKM-------------------------------------ANAMEPGR-VTFDDKMVVRK 143 (312)
Q Consensus 106 ---~~~v~~~v~-S~~g~~~~~~-------------------------------------~~~~~p~~-~~~~~K~~~e~ 143 (312)
.+ ..++|+ ||........ .....+.. .|..+|..++.
T Consensus 167 l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~ 245 (311)
T 3o26_A 167 LQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA 245 (311)
T ss_dssp HTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred hccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence 34 457775 4422111100 00111222 35559999888
Q ss_pred HHHH-----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-cCCceE
Q 021470 144 AIED-----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-TLNRTM 217 (312)
Q Consensus 144 ~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~~~~~~ 217 (312)
+.+. .++.+..+.||++....... ......++.++.++.++..++ ..++.|
T Consensus 246 ~~~~la~e~~~i~v~~v~PG~v~T~~~~~-----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~ 302 (311)
T 3o26_A 246 YTRVLANKIPKFQVNCVCPGLVKTEMNYG-----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFF 302 (311)
T ss_dssp HHHHHHHHCTTSEEEEECCCSBCSGGGTT-----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred HHHHHHhhcCCceEEEecCCceecCCcCC-----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence 8764 25777888898876543221 012478899999999887654 234455
Q ss_pred Eec
Q 021470 218 YLR 220 (312)
Q Consensus 218 ~~~ 220 (312)
+.+
T Consensus 303 ~~~ 305 (311)
T 3o26_A 303 YDC 305 (311)
T ss_dssp ETC
T ss_pred ecc
Confidence 543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-14 Score=115.46 Aligned_cols=196 Identities=14% Similarity=0.113 Sum_probs=127.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.|+++||||++.||+++++.|.+.|.+|.+.+|+.... +.....++..+++|++|+++++++++ ++|++
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV--------HAPRHPRIRREELDITDSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST--------TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH--------hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 47999999999999999999999999999999985432 22335678899999999999988876 68999
Q ss_pred EEcCCCCccc------------cchhHhHHHHHHHH----HHhCCCceeec-CC-CCCCcccccccCCCCCc-hhhhHHH
Q 021470 80 ICAISGVHIR------------SHQILLQLKLVDAI----KEAGNVKRFLP-SE-FGTDPAKMANAMEPGRV-TFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~-~~~~K~~ 140 (312)
+|+||..... ++|+.+...+.+++ ++.+ -++|. || .+.... |..+ |..+|..
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~-------~~~~~Y~asKaa 153 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGS-------ADRPAYSASKGA 153 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCC-------SSCHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCC-------CCCHHHHHHHHH
Confidence 9999975421 15666555544444 3334 45664 44 332211 1234 4449999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-c
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-T 212 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~ 212 (312)
+..+.+. .|+++..|.||.+..+........ .+ ....+........+-..+|+|.+++.++.... +
T Consensus 154 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~----~~--~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~ 227 (242)
T 4b79_A 154 IVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD----VE--ATRRIMQRTPLARWGEAPEVASAAAFLCGPGASF 227 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC----HH--HHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC----HH--HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 8777653 578899999998765433221110 00 00000001111235678999999999987653 2
Q ss_pred -CCceEEecC
Q 021470 213 -LNRTMYLRP 221 (312)
Q Consensus 213 -~~~~~~~~~ 221 (312)
.|+.+.+.|
T Consensus 228 iTG~~l~VDG 237 (242)
T 4b79_A 228 VTGAVLAVDG 237 (242)
T ss_dssp CCSCEEEEST
T ss_pred ccCceEEECc
Confidence 356666643
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6.2e-15 Score=130.45 Aligned_cols=200 Identities=10% Similarity=0.021 Sum_probs=130.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.++++||||+|.||+++++.|+++|.+|++++|+. ......+.....++.++.+|++|.+++.++++ +
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~-----~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~ 287 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGG 287 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG-----GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc-----cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999862 22222222333467899999999988888765 4
Q ss_pred -CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHh----CCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 76 -VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEA----GNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 76 -~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~----~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
+|+|||+++..... ..|+.+..++.+++... + ..+||+ ||...... ......|.
T Consensus 288 ~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g-----~~g~~~Ya 361 (454)
T 3u0b_A 288 KVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAG-----NRGQTNYA 361 (454)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHC-----CTTCHHHH
T ss_pred CceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCC-----CCCCHHHH
Confidence 99999999976432 16788899999998876 3 456765 55322111 11123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..+.||++........... .... .........+...+|+|+++..++.
T Consensus 362 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~--~~~~~~l~r~g~pedvA~~v~fL~s 433 (454)
T 3u0b_A 362 TTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA------TREV--GRRLNSLFQGGQPVDVAELIAYFAS 433 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------------CHH--HHHSBTTSSCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh------hHHH--HHhhccccCCCCHHHHHHHHHHHhC
Confidence 599977666542 578999999998876543321110 0000 0000111234578999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+++.+.|
T Consensus 434 ~~a~~itG~~i~vdG 448 (454)
T 3u0b_A 434 PASNAVTGNTIRVCG 448 (454)
T ss_dssp GGGTTCCSCEEEESS
T ss_pred CccCCCCCcEEEECC
Confidence 542 2467777764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-14 Score=115.42 Aligned_cols=202 Identities=12% Similarity=0.057 Sum_probs=129.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|.+.|.+|.++.|+ .++.+. .+.+. ..++..+++|++|++++.++++
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~-----~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL-----EDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 555432 23333 3467889999999998888765
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHH----HHHhCCCceeec-CC-CCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SE-FGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~ 131 (312)
++|+++|+||.... . +.|+.+...+.++ .++.+ -.++|. || .+.... ...
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~------~~~ 154 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGG------FAG 154 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSS------SSC
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCC------CCC
Confidence 68999999985431 1 1566655444444 44455 356664 44 333211 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeE-EeCCCCcceeeeeHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV-LLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..|..+|..+..+.+. +|+++..|.||.+..+........ ...... ..........+-..+|+|.++
T Consensus 155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~~~~~R~g~pediA~~v 229 (254)
T 4fn4_A 155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP-----SELGMRTLTKLMSLSSRLAEPEDIANVI 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC-----CHHHHHHHHHHHTTCCCCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC-----cHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 3454599998777653 578899999998765432211111 000000 000000011355789999999
Q ss_pred HHHhcCCc-c-CCceEEecC
Q 021470 204 MKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~~ 221 (312)
+.++.+.. + .|+.+.+.|
T Consensus 230 ~fLaSd~a~~iTG~~i~VDG 249 (254)
T 4fn4_A 230 VFLASDEASFVNGDAVVVDG 249 (254)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhcCCcCCEEEeCC
Confidence 99987653 2 366677753
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=4.9e-15 Score=132.86 Aligned_cols=208 Identities=15% Similarity=0.135 Sum_probs=139.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhcc--CC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVKL--VD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~~--~d 77 (312)
.++|+||||+|+||.++++.|.++|+ +|++++|+.... +...+..+.+.. .++.++.+|++|.+++.+++++ +|
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEA-PGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCccc-HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 47899999999999999999999998 688899974321 111122233333 3478899999999999999975 99
Q ss_pred EEEEcCCCCccc--------------cchhHhHHHHHHHHHHh-CCCceeec-CCCCCCcccccccCCCCCchhhhHHHH
Q 021470 78 VVICAISGVHIR--------------SHQILLQLKLVDAIKEA-GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 78 ~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~-~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~ 141 (312)
+|||+++..... ..|+.+..++.+++... + ..+||+ ||....... .....|..+|..+
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~-----~g~~~YaaaKa~l 411 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGN-----AGQGAYAAANAAL 411 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCC-----TTBHHHHHHHHHH
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCC-----CCCHHHHHHHHHH
Confidence 999999976432 15788888999988765 5 677775 543221111 1113455599998
Q ss_pred HHHHH---HhCCCeEEEeccccccc-ccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceE
Q 021470 142 RKAIE---DAGIPFTYVSANCFAGY-FLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTM 217 (312)
Q Consensus 142 e~~~~---~~~~~~~i~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~ 217 (312)
+.+.+ ..|+++++++||.+.+. +..... ...+ . ...+..++.+|+++++..++..+.. .+
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~--------~~~~---~--~~g~~~l~~e~~a~~l~~al~~~~~---~v 475 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGGGMAAGAG--------EESL---S--RRGLRAMDPDAAVDALLGAMGRNDV---CV 475 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH--------HHHH---H--HHTBCCBCHHHHHHHHHHHHHHTCS---EE
T ss_pred HHHHHHHHHcCCcEEEEECCcccCCccccccc--------HHHH---H--hcCCCCCCHHHHHHHHHHHHhCCCC---EE
Confidence 88776 36899999999987321 111000 0000 0 1124578999999999999976642 23
Q ss_pred EecCCCCcCCHHHHHHHHHH
Q 021470 218 YLRPPKNILSQREVVETWEK 237 (312)
Q Consensus 218 ~~~~~~~~~s~~e~~~~~~~ 237 (312)
.+ . .+.+..+...+..
T Consensus 476 ~v---~-~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 476 TV---V-DVDWERFAPATNA 491 (511)
T ss_dssp EE---C-CBCHHHHHHHHHH
T ss_pred EE---E-eCCHHHHHhhhcc
Confidence 33 2 4567777666554
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.5e-14 Score=119.81 Aligned_cols=199 Identities=11% Similarity=0.054 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEE-CCCCCCChHHHHHh-hhhc---cCCCeEEEccCCCHH----------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLH-RPEIGVDIEKVQML-LSFK---EQGAKLVSGSFNDYQ---------- 67 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~l~---~~~~~~v~~D~~d~~---------- 67 (312)
.++++||||+|.||+++++.|+++|++|++++ |+ +++.+.. +.+. ..++.++++|++|++
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS-----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC-----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC-----HHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 47899999999999999999999999999999 87 4444321 2232 346889999999988
Q ss_pred -------HHHHHhc-------cCCEEEEcCCCCcc------c----------------------cchhHhHHHHHHHHHH
Q 021470 68 -------SLVNAVK-------LVDVVICAISGVHI------R----------------------SHQILLQLKLVDAIKE 105 (312)
Q Consensus 68 -------~l~~~~~-------~~d~v~~~~~~~~~------~----------------------~~~~~~~~~l~~aa~~ 105 (312)
++.++++ ++|++||+++.... . ..|+.+...+++++..
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 8887765 78999999986431 1 1456666677776653
Q ss_pred h----CC-----Cceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccC
Q 021470 106 A----GN-----VKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGL 168 (312)
Q Consensus 106 ~----~~-----v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~ 168 (312)
. +. ..++|+ |+...... ......|..+|..++.+.+. .++.+..++||.+...+ . .
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~ 236 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQP-----LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M 236 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCC-----CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C
Confidence 2 20 246665 44332211 11223455599998877653 47889999999886554 2 1
Q ss_pred CCCCccCCCCCeeEEeCCCCcce-eeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 169 CQPGSILPSKDSVVLLGDGNPKA-IYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.... . .. +....... .+.+.+|+|++++.++..+. ..|+.+.+.|
T Consensus 237 -~~~~--~--~~---~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 284 (291)
T 1e7w_A 237 -PPAV--W--EG---HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 284 (291)
T ss_dssp -CHHH--H--HH---HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CHHH--H--HH---HHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence 0000 0 00 00001111 36789999999999997542 2456677754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.7e-14 Score=118.94 Aligned_cols=192 Identities=13% Similarity=0.066 Sum_probs=121.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC----CCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI----GVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|+||+++++.|+++|++|++.+|... ....++.+ ..+.+...+.. +.+|+.|.+++.++++
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999765311 00133332 22334333333 3589999876665543
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++..... .+|+.+..++++++ ++.+ ..++|+ ||...... ..+.
T Consensus 88 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~-----~~~~ 161 (319)
T 1gz6_A 88 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYG-----NFGQ 161 (319)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC-----CTTC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccC-----CCCC
Confidence 689999999965421 15677766666665 4455 577775 54321111 1112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. .++.+..++||.+ .++.... . ......+++.+|+|.+++
T Consensus 162 ~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~-------~----------~~~~~~~~~p~dvA~~~~ 223 (319)
T 1gz6_A 162 ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV-------M----------PEDLVEALKPEYVAPLVL 223 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG-------S----------CHHHHHHSCGGGTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc-------C----------ChhhhccCCHHHHHHHHH
Confidence 3455599998877653 4788999999975 2211100 0 011224578999999999
Q ss_pred HHhcCCcc-CCceEEe
Q 021470 205 KAINDPRT-LNRTMYL 219 (312)
Q Consensus 205 ~~l~~~~~-~~~~~~~ 219 (312)
.++..+.. .|+.+.+
T Consensus 224 ~l~s~~~~~tG~~~~v 239 (319)
T 1gz6_A 224 WLCHESCEENGGLFEV 239 (319)
T ss_dssp HHTSTTCCCCSCEEEE
T ss_pred HHhCchhhcCCCEEEE
Confidence 99876533 3455554
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.4e-14 Score=115.98 Aligned_cols=206 Identities=13% Similarity=0.091 Sum_probs=125.3
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.|+++||||+| .||+++++.|.+.|.+|.+..|+.... .+-.+..+.+...++..+++|++|++++.++++
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSR-KELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 58999999887 799999999999999999999984322 112222333444578999999999988887764
Q ss_pred -cCCEEEEcCCCCccc-------c-----------chhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 -LVDVVICAISGVHIR-------S-----------HQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~-------~-----------~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+++|+++..... + .|+.....+..++...- .--++|. ||...... .|...
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~------~~~~~ 158 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA------VQNYN 158 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC------CTTTH
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC------cccch
Confidence 689999999864311 0 23333344444443321 0124554 44322111 12234
Q ss_pred hh-hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TF-DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~-~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.| .+|..++.+.+. .|+++..|.||.+............ .....+........+...+|+|.+++.
T Consensus 159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~------~~~~~~~~~~Pl~R~g~peevA~~v~f 232 (256)
T 4fs3_A 159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN------TILKEIKERAPLKRNVDQVEVGKTAAY 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH------HHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH------HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 44 499998776653 5788999999987654332211100 000000000011135578999999999
Q ss_pred HhcCCc-c-CCceEEecC
Q 021470 206 AINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~-~-~~~~~~~~~ 221 (312)
++.+.. + .|+.+.+.|
T Consensus 233 L~Sd~a~~iTG~~i~VDG 250 (256)
T 4fs3_A 233 LLSDLSSGVTGENIHVDS 250 (256)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCccCCEEEECc
Confidence 987643 2 366667753
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.2e-15 Score=122.48 Aligned_cols=198 Identities=10% Similarity=0.017 Sum_probs=124.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLA---LGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~ 72 (312)
|..++++||||+|+||+++++.|++ .|++|++++|+ +++.+.. +.+. ..++.++++|++|++++.++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~ 78 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCC-----HHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHH
Confidence 4567899999999999999999999 89999999998 5444322 2232 34578899999999888877
Q ss_pred hc---------cCC--EEEEcCCCCcc--------c---------cchhHhHHHHHHHHHHhC-----CCceeec-CCCC
Q 021470 73 VK---------LVD--VVICAISGVHI--------R---------SHQILLQLKLVDAIKEAG-----NVKRFLP-SEFG 118 (312)
Q Consensus 73 ~~---------~~d--~v~~~~~~~~~--------~---------~~~~~~~~~l~~aa~~~~-----~v~~~v~-S~~g 118 (312)
++ ++| ++||+++.... . +.|+.+..++++++...- ...++|+ ||..
T Consensus 79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~ 158 (259)
T 1oaa_A 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence 64 358 99999986421 1 157778888888887542 1245665 5433
Q ss_pred CCcccccccCCCCCchhhhHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceee
Q 021470 119 TDPAKMANAMEPGRVTFDDKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIY 193 (312)
Q Consensus 119 ~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (312)
... +..+...|..+|..++.+.+. .++++..+.||.+..++........ ........+........+
T Consensus 159 ~~~-----~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~p~~~~ 230 (259)
T 1oaa_A 159 ALQ-----PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS---KDPELRSKLQKLKSDGAL 230 (259)
T ss_dssp GTS-----CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC---SCHHHHHHHHHHHHTTCS
T ss_pred hcC-----CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhcc---CChhHHHHHHHhhhcCCc
Confidence 211 112223455599999888764 2366677888887654322110000 000000000000001246
Q ss_pred eeHHHHHHHHHHHhcCCc
Q 021470 194 VDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~~ 211 (312)
.+++|+|++++.++....
T Consensus 231 ~~p~dvA~~v~~l~~~~~ 248 (259)
T 1oaa_A 231 VDCGTSAQKLLGLLQKDT 248 (259)
T ss_dssp BCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhhcc
Confidence 789999999999987543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-14 Score=121.63 Aligned_cols=202 Identities=13% Similarity=0.168 Sum_probs=124.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-----cCCCeEEEccCCCHHHHHHHhcc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-----EQGAKLVSGSFNDYQSLVNAVKL-- 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~l~~~~~~-- 75 (312)
.++|+||||+|+||+++++.|+++|++|+++.|+.... .......+.+. ..++.++++|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcH-HHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 46899999999999999999999999999888764332 11111111111 25688999999999999998874
Q ss_pred ---CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 76 ---VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 76 ---~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
+|++||+++..... ++|+.++.++++++ ++.+ ..++|+ ||....... .....
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~-----~~~~~ 154 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL-----PFNDV 154 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC-----TTCHH
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCC-----CCChH
Confidence 89999999864311 16777777777775 4455 677775 443322111 11234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC--CCCCe-eEEeCC--C--Cc--ceeeeeHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL--PSKDS-VVLLGD--G--NP--KAIYVDED 197 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~--~--~~--~~~~v~~~ 197 (312)
|..+|..++.+.+. .++++++++||.+..++........... ..... ...+.. . .. .+...+.+
T Consensus 155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe 234 (327)
T 1jtv_A 155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPE 234 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHH
Confidence 55599998877653 5789999999988765533211000000 00000 000000 0 00 01125899
Q ss_pred HHHHHHHHHhcCCc
Q 021470 198 DIAMYTMKAINDPR 211 (312)
Q Consensus 198 D~a~~~~~~l~~~~ 211 (312)
|+|++++.++..+.
T Consensus 235 dvA~~i~~l~~~~~ 248 (327)
T 1jtv_A 235 EVAEVFLTALRAPK 248 (327)
T ss_dssp HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999998764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-15 Score=127.86 Aligned_cols=160 Identities=13% Similarity=0.131 Sum_probs=106.9
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHH
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGH-------ETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~ 71 (312)
|. +|+|+||||+||||++++..|+++|+ +|+++++... ..+.. ....+.+..+.++ +|+.+.+++.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~---~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~ 76 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQA---MKALEGVVMELEDCAFPLL-AGLEATDDPKV 76 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCc---hhhccchhhhhhccccccc-CCeEeccChHH
Confidence 54 47999999999999999999999886 8999887521 12221 1122333233333 67776667788
Q ss_pred HhccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCc-ee-ecCCCCC-C-c-ccccc-cCCCCCchhhh
Q 021470 72 AVKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVK-RF-LPSEFGT-D-P-AKMAN-AMEPGRVTFDD 137 (312)
Q Consensus 72 ~~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~-~~-v~S~~g~-~-~-~~~~~-~~~p~~~~~~~ 137 (312)
+++++|+|||+|+..... ..|+..++++++++++++..+ ++ ++|+-.. . . ..... +..|...|..+
T Consensus 77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~t 156 (327)
T 1y7t_A 77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMT 156 (327)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECC
T ss_pred HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccc
Confidence 899999999999976421 278999999999999974122 44 4443110 0 0 00011 23444555559
Q ss_pred HHHHHHHHH----HhCCCeEEEecccccccc
Q 021470 138 KMVVRKAIE----DAGIPFTYVSANCFAGYF 164 (312)
Q Consensus 138 K~~~e~~~~----~~~~~~~i~r~~~~~~~~ 164 (312)
|...|++.. ..+++.+++|+..++|+.
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h 187 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH 187 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence 998887654 468999999998777653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-13 Score=110.49 Aligned_cols=206 Identities=11% Similarity=0.058 Sum_probs=127.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|.+.|.+|.+.+|+.... +..+.... ...++..+++|++|++++.++++ +
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~--~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG--AFLDALAQ-RQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH--HHHHHHHH-HCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH--HHHHHHHh-cCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999985432 22222222 24678999999999988877764 6
Q ss_pred CCEEEEcCCCCccc-------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCc-hhh
Q 021470 76 VDVVICAISGVHIR-------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRV-TFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~-~~~ 136 (312)
+|+++|++|..... +.|+.+...+.+++ ++.+ -++|. ||...... .|... |..
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~------~~~~~~Y~a 155 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTG------QGNTSGYCA 155 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHC------CSSCHHHHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccC------CCCchHHHH
Confidence 89999999964321 14555555554444 3333 35654 44221111 12234 445
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc-eeeeeHHHHHHHHHHHhc
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK-AIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~a~~~~~~l~ 208 (312)
+|..+..+.+. .|+++..|.||.+............. .......-....... ..+...+|+|.+++.++.
T Consensus 156 sKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS 233 (258)
T 4gkb_A 156 SKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFE--DPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLS 233 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhccc--ChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 99998777653 68999999999887554332211100 000000000000111 146679999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... -.|+.+.+.|
T Consensus 234 ~~a~~iTG~~i~VDG 248 (258)
T 4gkb_A 234 PRASHTTGEWLFVDG 248 (258)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred chhcCccCCeEEECC
Confidence 643 2467777754
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=117.09 Aligned_cols=204 Identities=15% Similarity=0.121 Sum_probs=128.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
|+++||||++.||+++++.|++.|.+|.+.+|+ .++.+.. +++ ..++..+++|++|+++++++++ +
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~-----~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRR-----KDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999999999999998 5555433 333 5678899999999988888765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec--CCCCCCcccccccCCCCCc-hhhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP--SEFGTDPAKMANAMEPGRV-TFDD 137 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~--S~~g~~~~~~~~~~~p~~~-~~~~ 137 (312)
+|++||+++..... +.|+.+...+.+++...= .-.++|. |..+... .|... |..+
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~-------~~~~~~Y~as 176 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG-------TPAFSVYAAS 176 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC-------CTTCHHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC-------CCCchHHHHH
Confidence 89999999875421 167777777777765431 0123443 3333221 12234 4449
Q ss_pred HHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 138 KMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 138 K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|..+..+.+. .|+++..|.||.+....+......... ........+........+-..+|+|.+++.++.+.
T Consensus 177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~ 255 (273)
T 4fgs_A 177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPV-QQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDD 255 (273)
T ss_dssp HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHH-HHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCch-hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 9998877663 467888899998764433221110000 00000000000001113557899999999999764
Q ss_pred c-c-CCceEEecC
Q 021470 211 R-T-LNRTMYLRP 221 (312)
Q Consensus 211 ~-~-~~~~~~~~~ 221 (312)
. + .|+.+.+.|
T Consensus 256 a~~iTG~~i~VDG 268 (273)
T 4fgs_A 256 SSFVTGAELFVDG 268 (273)
T ss_dssp GTTCCSCEEEEST
T ss_pred hcCccCCeEeECc
Confidence 3 2 366777754
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=8.2e-14 Score=115.37 Aligned_cols=205 Identities=11% Similarity=0.014 Sum_probs=130.1
Q ss_pred CcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCCCChHH-HH-HhhhhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIGVDIEK-VQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++|||| +|+||+++++.|++.|++|++++|+ +++ .+ ..+.+ ..++.++++|++|++++.++++
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD-----RLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECS-----CHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC-----hHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 378999999 9999999999999999999999997 333 12 22222 3468899999999999888876
Q ss_pred ------cCCEEEEcCCCCcc-----c--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCccccccc
Q 021470 75 ------LVDVVICAISGVHI-----R--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 75 ------~~d~v~~~~~~~~~-----~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~ 127 (312)
++|++||+++.... . ..|+.+..++++++...- .-.++|+ |+.+.. .
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~----- 154 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-A----- 154 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-C-----
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-c-----
Confidence 78999999986531 0 156777888888887542 0135664 543321 1
Q ss_pred CCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCC------CeeEEeCCCCcce-ee
Q 021470 128 MEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSK------DSVVLLGDGNPKA-IY 193 (312)
Q Consensus 128 ~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~ 193 (312)
......|..+|..++.+.+. .++++..++||.+............. ... .....+....... .+
T Consensus 155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~rr~ 232 (269)
T 2h7i_A 155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGAL--GEEAGAQIQLLEEGWDQRAPIGWNM 232 (269)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTT--CHHHHHHHHHHHHHHHHHCTTCCCT
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccc--hhhHHHHHHHHHHhhhccCCcccCC
Confidence 11123344599998877653 47899999999886553321100000 000 0000000000011 35
Q ss_pred eeHHHHHHHHHHHhcCCc-c-CCceEEecC
Q 021470 194 VDEDDIAMYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
...+|+|++++.++.... . .|+.+.+.|
T Consensus 233 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 233 KDATPVAKTVCALLSDWLPATTGDIIYADG 262 (269)
T ss_dssp TCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred CCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence 678999999999997642 2 356666653
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=116.50 Aligned_cols=202 Identities=10% Similarity=0.072 Sum_probs=129.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|++.|.+|.+.+|+ .++.+ ..+.+. ..++..+++|++|+++++++++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~-----~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIR-----ATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSC-----HHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 54443 223333 3467888999999998888765
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+++|+||..... +.|+.+...+.+++. +.+.-.++|. ||...... .|...
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~------~~~~~ 157 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA------RPTVA 157 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB------CTTCH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC------CCCch
Confidence 589999999975532 156666655555443 3321346665 44332211 12344
Q ss_pred hh-hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TF-DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~-~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.| .+|..+..+.+. .|+++..|.||.+..+......... . .............+...+|+|.+++.
T Consensus 158 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~----~--~~~~~~~~~Pl~R~g~pediA~~v~f 231 (255)
T 4g81_D 158 PYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDK----Q--FDSWVKSSTPSQRWGRPEELIGTAIF 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCH----H--HHHHHHHHSTTCSCBCGGGGHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCH----H--HHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 44 499998777653 5888999999988755432211100 0 00000000011135578999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++.... -.|+.+.+.|
T Consensus 232 L~S~~a~~iTG~~i~VDG 249 (255)
T 4g81_D 232 LSSKASDYINGQIIYVDG 249 (255)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhCCCcCCEEEECC
Confidence 987643 2366667753
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.53 E-value=4.3e-13 Score=109.39 Aligned_cols=198 Identities=10% Similarity=0.037 Sum_probs=120.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-E--CCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHH-H---hc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL-H--RPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVN-A---VK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~-~---~~ 74 (312)
+++++||||+|+||+++++.|+++|++|+++ . |+ +++.+.. +.+ .+.++. |..+.+.+.+ + +.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~-----~~~~~~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFAD-----AAERQRFESEN--PGTIAL--AEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS-----HHHHHHHHHHS--TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCC-----HHHHHHHHHHh--CCCccc--CHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999 5 87 5554322 222 233332 4444433333 2 23
Q ss_pred cCCEEEEcCCCCcc---c--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCC
Q 021470 75 LVDVVICAISGVHI---R--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 ~~d~v~~~~~~~~~---~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~ 132 (312)
++|++||+++.... . +.|+.+..++++++. +.+ ..++|+ |+...... ..+..
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-----~~~~~ 145 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKP-----LAYNP 145 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSC-----CTTCT
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCC-----CCCch
Confidence 68999999986432 1 156777777777664 445 567775 54332211 11234
Q ss_pred chhhhHHHHHHHHHH-------hCCCeEEEeccccccccc---ccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 133 VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFL---GGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 133 ~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
.|..+|..++.+.+. .++++..++||.+..+.. ........ . ... .........+...+|+|++
T Consensus 146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~--~~~--~~~~~p~~r~~~pe~vA~~ 219 (244)
T 1zmo_A 146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPE--L--RER--VDRDVPLGRLGRPDEMGAL 219 (244)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHH--H--HHH--HHHHCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHH--H--HHH--HhcCCCCCCCcCHHHHHHH
Confidence 555699998877653 478899999998765543 21100000 0 000 0000011236789999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
++.++.... ..|+.+.+.|
T Consensus 220 v~~l~s~~~~~~tG~~i~vdg 240 (244)
T 1zmo_A 220 ITFLASRRAAPIVGQFFAFTG 240 (244)
T ss_dssp HHHHHTTTTGGGTTCEEEEST
T ss_pred HHHHcCccccCccCCEEEeCC
Confidence 999998643 2366666653
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-13 Score=112.26 Aligned_cols=199 Identities=15% Similarity=0.149 Sum_probs=123.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~~ 76 (312)
|+++||||++.||+++++.|++.|++|.+..|+.... ......+++|++|++++.++++ ++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 79 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQRLGGV 79 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999974321 2344578999999988887765 68
Q ss_pred CEEEEcCCCCcc-----c-----------cchhHhHHHHHH----HHHHhCCCceeec-CC-CCCCcccccccCCCCCch
Q 021470 77 DVVICAISGVHI-----R-----------SHQILLQLKLVD----AIKEAGNVKRFLP-SE-FGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 77 d~v~~~~~~~~~-----~-----------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~ 134 (312)
|++||+++.... . +.|+.+...+.+ ..++.+ -.++|. || .+... .++...+
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~------~~~~~~~ 152 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLP------LPESTTA 152 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------CTTTCHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccC------CCCccHH
Confidence 999999985321 1 155555544444 444555 356664 44 33211 1113456
Q ss_pred hh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCC-----CCccCCCCCe-eEEeCCCCcceeeeeHHHHH
Q 021470 135 FD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ-----PGSILPSKDS-VVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 135 ~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~v~~~D~a 200 (312)
|. +|..++.+.+. .|+++..|.||.+.......... .......... ..-.........+...+|+|
T Consensus 153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA 232 (261)
T 4h15_A 153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVA 232 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHH
Confidence 65 99998777653 58889999999886543211100 0000000000 00000001112356789999
Q ss_pred HHHHHHhcCCc-c-CCceEEecC
Q 021470 201 MYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
++++.++.... + .|+.+.+.|
T Consensus 233 ~~v~fLaS~~a~~itG~~i~VDG 255 (261)
T 4h15_A 233 NLIAFLASDRAASITGAEYTIDG 255 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCchhcCccCcEEEECC
Confidence 99999987543 2 366777754
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-13 Score=96.88 Aligned_cols=95 Identities=19% Similarity=0.224 Sum_probs=81.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+++|+|+|+ |++|+.+++.|++.| ++|++++|+ +++.+. +...++.++.+|+.+.+.+.++++++|+||+
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~-----~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHD-----LAALAV---LNRMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESC-----HHHHHH---HHTTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCC-----HHHHHH---HHhCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 579999999 999999999999999 999999998 666643 3356889999999999999999999999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+++.. ...+++++|.+.| ++++.++
T Consensus 76 ~~~~~--------~~~~~~~~~~~~g-~~~~~~~ 100 (118)
T 3ic5_A 76 AAPFF--------LTPIIAKAAKAAG-AHYFDLT 100 (118)
T ss_dssp CSCGG--------GHHHHHHHHHHTT-CEEECCC
T ss_pred CCCch--------hhHHHHHHHHHhC-CCEEEec
Confidence 99543 3578999999999 8877664
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.5e-13 Score=109.47 Aligned_cols=201 Identities=12% Similarity=0.080 Sum_probs=129.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.|+++||||++.||+++++.|.+.|.+|.+.+|+.. .+..+.... ...++..+++|++|+++++++++ ++|+++
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~---~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP---DETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH---HHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 478999999999999999999999999999999742 222222222 24568899999999998888776 699999
Q ss_pred EcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CC-CCCCcccccccCCCCCc-hhhhHH
Q 021470 81 CAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SE-FGTDPAKMANAMEPGRV-TFDDKM 139 (312)
Q Consensus 81 ~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~-~~~~K~ 139 (312)
|+++..... ++|+.+...+.+++. +.+.--++|. || .+.... |..+ |..+|.
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-------~~~~~Y~asKa 157 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-------IRVPSYTAAKH 157 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------SSCHHHHHHHH
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-------CCChHHHHHHH
Confidence 999975432 156777666655543 3331246664 44 332211 1234 444999
Q ss_pred HHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-
Q 021470 140 VVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR- 211 (312)
Q Consensus 140 ~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~- 211 (312)
.+..+.+. .|+++..|.||++..+......... .. ...+........+-..+|+|.+++.++....
T Consensus 158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~----~~--~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~ 231 (247)
T 4hp8_A 158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA----AR--NKAILERIPAGRWGHSEDIAGAAVFLSSAAAD 231 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH----HH--HHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH----HH--HHHHHhCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 98777653 5888999999988655332211100 00 0000000111235578999999999987653
Q ss_pred c-CCceEEec
Q 021470 212 T-LNRTMYLR 220 (312)
Q Consensus 212 ~-~~~~~~~~ 220 (312)
+ .|+.+.+.
T Consensus 232 ~iTG~~i~VD 241 (247)
T 4hp8_A 232 YVHGAILNVD 241 (247)
T ss_dssp TCCSCEEEES
T ss_pred CCcCCeEEEC
Confidence 2 35666664
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=4.9e-13 Score=119.10 Aligned_cols=190 Identities=11% Similarity=0.094 Sum_probs=128.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
++++||||+|.||.++++.|.++|. +|+++.|+.... +...+..+.+. ..++.++.+|++|.+++.++++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~-~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADA-PGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCCh-HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 7899999999999999999999997 788888874322 11122223333 3457889999999999999886
Q ss_pred cCCEEEEcCCCC-ccc--------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhH
Q 021470 75 LVDVVICAISGV-HIR--------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDK 138 (312)
Q Consensus 75 ~~d~v~~~~~~~-~~~--------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K 138 (312)
++|+|||+++.. ... ..|+.+..++.+++...+ ..+||+ ||....... .....|..+|
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~-----~g~~~YaAaK 392 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGS-----GGQPGYAAAN 392 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTC-----TTCHHHHHHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCC-----CCcHHHHHHH
Confidence 479999999976 321 268888999999998877 778775 542211110 1123455599
Q ss_pred HHHHHHHH---HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIE---DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+ ..|++++.|.||.+.+..+...... ... +. ...+..+..++.++++..++..+.
T Consensus 393 a~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~------~~~--l~---~~g~~~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 393 AYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEV------HDR--LV---RQGVLAMEPEHALGALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECEESSSCC------------CHH--HH---HTTEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCeEEEEECCcccCCccccChHH------HHH--HH---hcCCCCCCHHHHHHHHHHHHcCCC
Confidence 98877665 4689999999998764332210000 000 00 111345688999999999987664
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.39 E-value=4.9e-12 Score=116.20 Aligned_cols=224 Identities=10% Similarity=0.024 Sum_probs=133.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC----CChHHH-HHhhhhccCCCeEEEccCCCHHHHHHHhc--
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG----VDIEKV-QMLLSFKEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
+.++++||||+|.||+++++.|+++|++|++++|.... ...++. ...+.+...+.. +.+|+.|.+++.++++
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~ 96 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETA 96 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC--
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHH
Confidence 35789999999999999999999999999999872110 001111 122333333333 3489999888877765
Q ss_pred -----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 -----LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+|+..... ++|+.+..++++++ ++.+ ..++|. ||...... ...
T Consensus 97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~-----~~~ 170 (613)
T 3oml_A 97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYG-----NFG 170 (613)
T ss_dssp --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHC-----CTT
T ss_pred HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC-----CCC
Confidence 589999999975421 16777777777777 4445 467775 54221111 111
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .|+.+..+.||.... +... .. ..........+|+|.++
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~-----~~~~----~~---------~~~~~~~~~pedvA~~v 232 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASR-----MTEG----IL---------PDILFNELKPKLIAPVV 232 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------CC----CC---------CHHHHTTCCGGGTHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCCh-----hhhh----cc---------chhhhhcCCHHHHHHHH
Confidence 23455599998877653 478888889985321 1110 00 01112345789999999
Q ss_pred HHHhcCCcc-CCceEEecCC-------------------CCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 204 MKAINDPRT-LNRTMYLRPP-------------------KNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 204 ~~~l~~~~~-~~~~~~~~~~-------------------~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
+.++..... .|+.+.+.|. +...+..++.+.+.++.+......+-+.
T Consensus 233 ~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~~~~~~~~~ 299 (613)
T 3oml_A 233 AYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMSKAKHLGAI 299 (613)
T ss_dssp HHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCTTCBCCSSH
T ss_pred HHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccccCcCCCCH
Confidence 999876532 2444443211 1246888888888888887654444443
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-11 Score=109.25 Aligned_cols=208 Identities=10% Similarity=0.042 Sum_probs=132.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe-EEEE-ECCCCC----------CChHHHHHhhhhc--cCCCeEEEccCCCHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHE-TYVL-HRPEIG----------VDIEKVQMLLSFK--EQGAKLVSGSFNDYQS 68 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~----------~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~ 68 (312)
.++++||||+|.||.++++.|.++|.+ |+++ .|+... . +...+..+.+. ..++.++.+|++|.++
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAED-SGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC----------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccC-HHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 368999999999999999999999987 5555 676422 0 11111222232 3468889999999999
Q ss_pred HHHHhcc------CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCC----Cceeec-CCCCCCccc
Q 021470 69 LVNAVKL------VDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGN----VKRFLP-SEFGTDPAK 123 (312)
Q Consensus 69 l~~~~~~------~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~----v~~~v~-S~~g~~~~~ 123 (312)
+.++++. +|+|||+++..... ..|+.+..++.+++..... ..+||+ ||.......
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 9998864 69999999975431 1678889999999887541 345664 543322111
Q ss_pred ccccCCCCC-chhhhHHHHHHHHHH---hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 124 MANAMEPGR-VTFDDKMVVRKAIED---AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 124 ~~~~~~p~~-~~~~~K~~~e~~~~~---~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
+.. .|..+|..++.+.+. .|++++.|.||.+...+... .. .... .. ......+..+++
T Consensus 410 ------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~---~~----~~~~---~~--~~g~~~l~pee~ 471 (525)
T 3qp9_A 410 ------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTE---GA----TGER---LR--RLGLRPLAPATA 471 (525)
T ss_dssp ------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGS---SH----HHHH---HH--HTTBCCBCHHHH
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccc---hh----hHHH---HH--hcCCCCCCHHHH
Confidence 123 344599998887654 57889999999873322210 00 0000 00 011245789999
Q ss_pred HHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHH
Q 021470 200 AMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWE 236 (312)
Q Consensus 200 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~ 236 (312)
++++..++..+. . .+.+ . .+.+..+...+.
T Consensus 472 a~~l~~~l~~~~--~-~v~v---~-~~dw~~~~~~~~ 501 (525)
T 3qp9_A 472 LTALDTALGHGD--T-AVTI---A-DVDWSSFAPGFT 501 (525)
T ss_dssp HHHHHHHHHHTC--S-EEEE---C-CBCHHHHHHHHH
T ss_pred HHHHHHHHhCCC--C-eEEE---E-eCCHHHHHhhcc
Confidence 999999998763 1 2233 2 456666665554
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=8.7e-11 Score=98.55 Aligned_cols=208 Identities=11% Similarity=0.037 Sum_probs=116.6
Q ss_pred CcEEEEEcCC--chhhHHHHHHHHhCCCeEEEEECCCCCC------ChHHHHHhhhhccCC----CeEEEcc--------
Q 021470 3 KSKVLIIGGT--GYLGKRLVKASLALGHETYVLHRPEIGV------DIEKVQMLLSFKEQG----AKLVSGS-------- 62 (312)
Q Consensus 3 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~l~~~~----~~~v~~D-------- 62 (312)
.++++||||+ |+||+++++.|++.|++|++++|+.... ..++.+..+.+.... ...+.+|
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhh
Confidence 4789999999 9999999999999999999998641000 000000111111111 1333333
Q ss_pred CC----C--------HHHHHHHh-------ccCCEEEEcCCCCc-----cc-----------cchhHhHHHHHHHHHHhC
Q 021470 63 FN----D--------YQSLVNAV-------KLVDVVICAISGVH-----IR-----------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 63 ~~----d--------~~~l~~~~-------~~~d~v~~~~~~~~-----~~-----------~~~~~~~~~l~~aa~~~~ 107 (312)
+. | ++++.+++ .++|++||+++... .. ..|+.+..++++++...-
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 167 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 22 1 22343333 36899999997531 01 167788888888887641
Q ss_pred -CCceeec-CCCCCCcccccccCCCC-CchhhhHHHHHHHHH--------HhCCCeEEEecccccccccccCCCCCccCC
Q 021470 108 -NVKRFLP-SEFGTDPAKMANAMEPG-RVTFDDKMVVRKAIE--------DAGIPFTYVSANCFAGYFLGGLCQPGSILP 176 (312)
Q Consensus 108 -~v~~~v~-S~~g~~~~~~~~~~~p~-~~~~~~K~~~e~~~~--------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~ 176 (312)
.-.++|+ |+...... .... ..|..+|..++.+.+ ..|+++..++||.+...........
T Consensus 168 ~~~g~iv~isS~~~~~~-----~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~----- 237 (297)
T 1d7o_A 168 NPGGASISLTYIASERI-----IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI----- 237 (297)
T ss_dssp EEEEEEEEEECGGGTSC-----CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH-----
T ss_pred ccCceEEEEeccccccC-----CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc-----
Confidence 0135664 44222111 1112 245559998876654 1589999999998876543221000
Q ss_pred CCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-c-CCceEEecC
Q 021470 177 SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 177 ~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
. ..............+.+++|+|++++.++.... . .|+.+++.|
T Consensus 238 ~-~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdg 283 (297)
T 1d7o_A 238 D-TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283 (297)
T ss_dssp H-HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred H-HHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 0 000000000011235689999999999987542 2 366777753
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.27 E-value=6e-11 Score=100.58 Aligned_cols=213 Identities=11% Similarity=0.093 Sum_probs=102.6
Q ss_pred cEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCC------CCCChHHHH------------HhhhhccCC-----CeE
Q 021470 4 SKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPE------IGVDIEKVQ------------MLLSFKEQG-----AKL 58 (312)
Q Consensus 4 ~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~------~~~~~~~~~------------~~~~l~~~~-----~~~ 58 (312)
++++|||| +|.||+++++.|++.|++|++++|+. .....++.+ ..+.+...+ ...
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI 89 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence 68999999 89999999999999999999998741 000001110 011111111 355
Q ss_pred EEccC------------CC--------HHHHHHHh-------ccCCEEEEcCCCCc-----cc-----------cchhHh
Q 021470 59 VSGSF------------ND--------YQSLVNAV-------KLVDVVICAISGVH-----IR-----------SHQILL 95 (312)
Q Consensus 59 v~~D~------------~d--------~~~l~~~~-------~~~d~v~~~~~~~~-----~~-----------~~~~~~ 95 (312)
+.+|+ +| ++++.+++ .++|++||+++... .. ..|+.+
T Consensus 90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g 169 (319)
T 2ptg_A 90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYS 169 (319)
T ss_dssp EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHH
T ss_pred ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHH
Confidence 55443 21 22343333 36899999998531 01 167778
Q ss_pred HHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCC-CchhhhHHHHHHHHH-------H-hCCCeEEEecccccccc
Q 021470 96 QLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPG-RVTFDDKMVVRKAIE-------D-AGIPFTYVSANCFAGYF 164 (312)
Q Consensus 96 ~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~-~~~~~~K~~~e~~~~-------~-~~~~~~i~r~~~~~~~~ 164 (312)
..++++++...= .-.++|+ |+....... ... ..|..+|..++.+.+ . .++++..|+||.+....
T Consensus 170 ~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 170 FVSLLQHFLPLMKEGGSALALSYIASEKVI-----PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEECC-----------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred HHHHHHHHHHHHhcCceEEEEecccccccc-----CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 888888887641 0135654 433221111 111 245558877665543 2 58999999999886654
Q ss_pred cccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 165 LGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
............................+...+|+|++++.++.... ..|+.+.+.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG 303 (319)
T 2ptg_A 245 ASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN 303 (319)
T ss_dssp ----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence 32211000000000000000000111235689999999999987532 2356677754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=103.21 Aligned_cols=212 Identities=11% Similarity=0.071 Sum_probs=116.6
Q ss_pred CcEEEEEcC--CchhhHHHHHHHHhCCCeEEEEECCCCC------CChHHHHHhhhhccCC----CeEEEccC-------
Q 021470 3 KSKVLIIGG--TGYLGKRLVKASLALGHETYVLHRPEIG------VDIEKVQMLLSFKEQG----AKLVSGSF------- 63 (312)
Q Consensus 3 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~l~~~~----~~~v~~D~------- 63 (312)
.++++|||| +|.||+++++.|++.|++|++++|+... ...++.+....+...+ +..+.+|+
T Consensus 9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (315)
T 2o2s_A 9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPED 88 (315)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTS
T ss_pred CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccch
Confidence 368999999 8999999999999999999999875100 0000111112221111 34555443
Q ss_pred -----CC--------HHHHHHHh-------ccCCEEEEcCCCCc-----cc-----------cchhHhHHHHHHHHHHhC
Q 021470 64 -----ND--------YQSLVNAV-------KLVDVVICAISGVH-----IR-----------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 64 -----~d--------~~~l~~~~-------~~~d~v~~~~~~~~-----~~-----------~~~~~~~~~l~~aa~~~~ 107 (312)
+| ++++.+++ .++|++||+++... .. ..|+.+..++++++...-
T Consensus 89 ~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 168 (315)
T 2o2s_A 89 VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM 168 (315)
T ss_dssp SCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred hhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 21 23344433 36899999998531 11 157777888888876531
Q ss_pred -CCceeec-CCCCCCcccccccCCCC-CchhhhHHHHHHHHH--------HhCCCeEEEecccccccccccCCCCCccCC
Q 021470 108 -NVKRFLP-SEFGTDPAKMANAMEPG-RVTFDDKMVVRKAIE--------DAGIPFTYVSANCFAGYFLGGLCQPGSILP 176 (312)
Q Consensus 108 -~v~~~v~-S~~g~~~~~~~~~~~p~-~~~~~~K~~~e~~~~--------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~ 176 (312)
.-.++|+ |+....... ... ..|..+|..++.+.+ ..|+++..++||.+............ ..
T Consensus 169 ~~~g~Iv~isS~~~~~~~-----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~--~~ 241 (315)
T 2o2s_A 169 NEGGSAVTLSYLAAERVV-----PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG--EK 241 (315)
T ss_dssp EEEEEEEEEEEGGGTSCC-----TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS--SS
T ss_pred hcCCEEEEEecccccccC-----CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc--cc
Confidence 0135554 432221111 111 245569998876654 15889999999988655432211000 00
Q ss_pred CC-Cee-EEeCCCCcceeeeeHHHHHHHHHHHhcCCc-c-CCceEEecC
Q 021470 177 SK-DSV-VLLGDGNPKAIYVDEDDIAMYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 177 ~~-~~~-~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
.. ... ...........+...+|+|++++.++.... . .|+.+.+.|
T Consensus 242 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 290 (315)
T 2o2s_A 242 SFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN 290 (315)
T ss_dssp CHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence 00 000 000000011235689999999999987532 2 356666653
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.8e-10 Score=83.10 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=76.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
|++|+|+|+ |.+|+.+++.|.+.|++|+++.++ +++.+ .+...++.++.+|.++++.+.++ ++++|+||.
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~-----~~~~~---~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKS-----KEKIE---LLEDEGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESC-----HHHHH---HHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECC-----HHHHH---HHHHCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 568999995 999999999999999999999998 76663 34456889999999999999886 458999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+. ......++..+++.+ ..+++.
T Consensus 77 ~~~~-------~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 77 TGSD-------DEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CCSC-------HHHHHHHHHHHHHHC-CCCEEE
T ss_pred ecCC-------HHHHHHHHHHHHHhC-CceEEE
Confidence 8873 334456677778877 666664
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=5e-10 Score=83.18 Aligned_cols=96 Identities=22% Similarity=0.282 Sum_probs=75.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
+++|+|+|+ |.+|+.+++.|.+.|++|++++|+ +++. +.+...+...+.+|..+.+.+.++ +.++|+|++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~-----~~~~---~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDIN-----EEKV---NAYASYATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESC-----HHHH---HTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHH---HHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 568999997 999999999999999999999998 6555 333345678889999999888876 778999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+++.. ......++..+++.+ +++++.
T Consensus 77 ~~~~~------~~~~~~~~~~~~~~~-~~~ii~ 102 (144)
T 2hmt_A 77 AIGAN------IQASTLTTLLLKELD-IPNIWV 102 (144)
T ss_dssp CCCSC------HHHHHHHHHHHHHTT-CSEEEE
T ss_pred CCCCc------hHHHHHHHHHHHHcC-CCeEEE
Confidence 98753 123345777788888 676665
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.9e-09 Score=97.56 Aligned_cols=209 Identities=14% Similarity=0.085 Sum_probs=127.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccC-CCHHHHHH-H---hcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSF-NDYQSLVN-A---VKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~-~d~~~l~~-~---~~~ 75 (312)
.++++||||++.||+++++.|.++|++|++.+|.. .++. .+.+.. ..+..+.+|+ .+.+.+.+ + +.+
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~----~~~~--~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD----ATKT--VDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC----CHHH--HHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc----HHHH--HHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999987642 1111 122222 2355566777 55443322 2 336
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CC-CCCCcccccccCCCCC-ch
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SE-FGTDPAKMANAMEPGR-VT 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~-~g~~~~~~~~~~~p~~-~~ 134 (312)
+|++||++|..... ++|+.+...+.+++. +.+ -.++|. || .|... .|.. .|
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~-------~~~~~~Y 467 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYG-------NFGQANY 467 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSC-------CTTBHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccC-------CCCChhH
Confidence 99999999965321 156666655555543 333 356664 44 22111 1123 45
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..+..+.+. .|+.+..|.||. ....... . .. . ........+|+|.+++.++
T Consensus 468 ~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~---~----~~-~---------~~~~~~~pe~vA~~v~~L~ 529 (604)
T 2et6_A 468 SSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS---I----MR-E---------QDKNLYHADQVAPLLVYLG 529 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------------CCSSCGGGTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc---c----Cc-h---------hhccCCCHHHHHHHHHHHh
Confidence 5599988766542 578888899983 2111110 0 00 0 0112357899999999888
Q ss_pred cCCc-cCCceEEecCC----------------CCcCCHHHHHHHHHHHhCCcc
Q 021470 208 NDPR-TLNRTMYLRPP----------------KNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 208 ~~~~-~~~~~~~~~~~----------------~~~~s~~e~~~~~~~~~g~~~ 243 (312)
.... ..|+.+.+.|. +...+..++.+.+.++....-
T Consensus 530 s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 582 (604)
T 2et6_A 530 TDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT 582 (604)
T ss_dssp STTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred CCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence 6532 24555555432 235688899988888877653
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-10 Score=96.51 Aligned_cols=157 Identities=8% Similarity=-0.008 Sum_probs=98.4
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCC----CChHHHHHhhhh------ccCCCeEEEccCCCH--H-
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIG----VDIEKVQMLLSF------KEQGAKLVSGSFNDY--Q- 67 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~l------~~~~~~~v~~D~~d~--~- 67 (312)
.++++||||++ .||++++++|+++|++|++.+|++.. .+.++....... ....+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 47899999875 99999999999999999988766200 000111000111 012257788888766 5
Q ss_pred -----------------HHHHHhc-------cCCEEEEcCCCCc--cc--------------cchhHhHHHHHHHHHHhC
Q 021470 68 -----------------SLVNAVK-------LVDVVICAISGVH--IR--------------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 68 -----------------~l~~~~~-------~~d~v~~~~~~~~--~~--------------~~~~~~~~~l~~aa~~~~ 107 (312)
++.++++ ++|++||++|... .. .+|+.+...+.+++...=
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5555543 5899999998531 10 167777888888776542
Q ss_pred CC--ceeec-CC-CCCCcccccccCCCCC-chhhhHHHHHHHHH-------H-hCCCeEEEecccccccccc
Q 021470 108 NV--KRFLP-SE-FGTDPAKMANAMEPGR-VTFDDKMVVRKAIE-------D-AGIPFTYVSANCFAGYFLG 166 (312)
Q Consensus 108 ~v--~~~v~-S~-~g~~~~~~~~~~~p~~-~~~~~K~~~e~~~~-------~-~~~~~~i~r~~~~~~~~~~ 166 (312)
. .++|+ || .+.... .... .|..+|..++.+.+ . .++.+..+.||++...+..
T Consensus 162 -~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~ 226 (329)
T 3lt0_A 162 -KPQSSIISLTYHASQKVV------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT 226 (329)
T ss_dssp -EEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_pred -hhCCeEEEEeCccccCCC------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHh
Confidence 1 25554 43 332111 1122 45559998776654 3 5899999999998765443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.3e-10 Score=108.35 Aligned_cols=189 Identities=14% Similarity=0.095 Sum_probs=113.7
Q ss_pred CcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEE-CCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGY-LGKRLVKASLALGHETYVLH-RPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.++++||||+|. ||+++++.|++.|++|++++ |+.... .+..+.+ ..+. ...+.++.+|++|.+++.++++
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~l-ee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~ 554 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQV-TDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 554 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTT-TTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHH-HHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 468999999998 99999999999999999984 543322 1111111 1221 2347789999999988887763
Q ss_pred ----------cCCEEEEcCCCCccc-----------------cchhHhHHHHHHHHHHhCC-----Cceeec-CCCCCCc
Q 021470 75 ----------LVDVVICAISGVHIR-----------------SHQILLQLKLVDAIKEAGN-----VKRFLP-SEFGTDP 121 (312)
Q Consensus 75 ----------~~d~v~~~~~~~~~~-----------------~~~~~~~~~l~~aa~~~~~-----v~~~v~-S~~g~~~ 121 (312)
++|++||+||..... .+|+.+..+++++++.... -.+||+ ||.....
T Consensus 555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~ 634 (1688)
T 2pff_A 555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF 634 (1688)
T ss_dssp SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS
T ss_pred HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc
Confidence 489999999864321 1566677777777743220 135664 4432211
Q ss_pred ccccccCCCCCchhhhHHHHHHHHHH-----hC--CCeEEEecccccc-cccccCCCCCccCCCCCeeEEeCCCCcceee
Q 021470 122 AKMANAMEPGRVTFDDKMVVRKAIED-----AG--IPFTYVSANCFAG-YFLGGLCQPGSILPSKDSVVLLGDGNPKAIY 193 (312)
Q Consensus 122 ~~~~~~~~p~~~~~~~K~~~e~~~~~-----~~--~~~~i~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (312)
.. ...|..+|..++.+..+ .+ +.+..+.||++.+ .+.... .. ... . .. ......
T Consensus 635 Gg-------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e~----~~~-~---l~--~iplR~ 696 (1688)
T 2pff_A 635 GG-------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI----IAE-G---IE--KMGVRT 696 (1688)
T ss_dssp SC-------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-TT----CST-T---TS--SSSCCC
T ss_pred CC-------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-hH----HHH-H---HH--hCCCCC
Confidence 11 23566699999988432 11 3344456776652 221110 00 000 0 00 011123
Q ss_pred eeHHHHHHHHHHHhcCC
Q 021470 194 VDEDDIAMYTMKAINDP 210 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~ 210 (312)
...+|+|++++.++...
T Consensus 697 ~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 697 FSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp CCCCTTHHHHHHHTSTT
T ss_pred CCHHHHHHHHHHHhCCC
Confidence 47899999999998765
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-09 Score=81.40 Aligned_cols=102 Identities=14% Similarity=0.135 Sum_probs=77.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v 79 (312)
|..++|+|+| .|.+|+.+++.|.+.|++|+++.|+. +++.+.+......++.++.+|.++++.+.++ ++++|.|
T Consensus 1 ~~~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~----~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 1 HRKDHFIVCG-HSILAINTILQLNQRGQNVTVISNLP----EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CCCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC----HHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCC----hHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 6778999999 59999999999999999999999962 2444333333356899999999999999887 8899999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+.+.. .....+...+++..+..+++.
T Consensus 76 i~~~~~d-------~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 76 LALSDND-------ADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EECSSCH-------HHHHHHHHHHHHHTSSSCEEE
T ss_pred EEecCCh-------HHHHHHHHHHHHHCCCCEEEE
Confidence 9988653 233455666776632556554
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=9.4e-10 Score=109.73 Aligned_cols=185 Identities=14% Similarity=0.080 Sum_probs=114.7
Q ss_pred CcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEE-CCCCCCChHHHH-Hh----hhhc--cCCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGY-LGKRLVKASLALGHETYVLH-RPEIGVDIEKVQ-ML----LSFK--EQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~-~~----~~l~--~~~~~~v~~D~~d~~~l~~~~ 73 (312)
.++++||||+|. ||+++++.|++.|++|++++ |+ .++.. .. ..+. ...+.++.+|++|.+++.+++
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~-----~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRF-----SKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSC-----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 478999999998 99999999999999999985 54 22221 11 1222 235788999999999888876
Q ss_pred c-------------cCCEEEEcCCCCccc-----------------cchhHhHHHHHHHHHHhCC-----Cceeec-CCC
Q 021470 74 K-------------LVDVVICAISGVHIR-----------------SHQILLQLKLVDAIKEAGN-----VKRFLP-SEF 117 (312)
Q Consensus 74 ~-------------~~d~v~~~~~~~~~~-----------------~~~~~~~~~l~~aa~~~~~-----v~~~v~-S~~ 117 (312)
+ ++|++||+||..... .+|+.+...++++++.... -.+||. |+.
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ 829 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN 829 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence 3 489999999965321 1566667777777743331 135664 443
Q ss_pred CCCcccccccCCCCCchhhhHHHHHHH-HHH----h--CCCeEEEecccccc-cccccCCCCCccCCCCCeeEEeCCCCc
Q 021470 118 GTDPAKMANAMEPGRVTFDDKMVVRKA-IED----A--GIPFTYVSANCFAG-YFLGGLCQPGSILPSKDSVVLLGDGNP 189 (312)
Q Consensus 118 g~~~~~~~~~~~p~~~~~~~K~~~e~~-~~~----~--~~~~~i~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (312)
...... ...|..+|..++.+ .+. . .+.+..+.||++.+ .+.... .. .... .. ..
T Consensus 830 ag~~gg-------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~-~~-----~~~~---~~--~~ 891 (1887)
T 2uv8_A 830 HGTFGG-------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-NI-----IAEG---IE--KM 891 (1887)
T ss_dssp TTCSSC-------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----C-CT-----THHH---HH--TT
T ss_pred HhccCC-------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccc-hh-----HHHH---HH--hc
Confidence 221111 23566699998877 221 1 25667778887762 322110 00 0000 00 01
Q ss_pred ceeeeeHHHHHHHHHHHhcCC
Q 021470 190 KAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 190 ~~~~v~~~D~a~~~~~~l~~~ 210 (312)
...+...+|+|++++.++...
T Consensus 892 plr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 892 GVRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp SCCCEEHHHHHHHHHGGGSHH
T ss_pred CCCCCCHHHHHHHHHHHhCCC
Confidence 113458999999999998765
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=99.07 E-value=8.7e-10 Score=97.33 Aligned_cols=103 Identities=24% Similarity=0.280 Sum_probs=78.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|++++|+|+| +|++|+++++.|++.|++|++++|+ +++.+.+... -.++..+++|+.|.+++.++++++|+||
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~-----~~~a~~la~~-~~~~~~~~~Dv~d~~~l~~~l~~~DvVI 73 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVI 73 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESS-----HHHHHHTTTT-CTTEEEEECCTTCHHHHHHHHTTSSEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECC-----HHHHHHHHHh-cCCceEEEeecCCHHHHHHHHcCCcEEE
Confidence 7788999998 8999999999999999999999998 6666433211 1246788999999999999999999999
Q ss_pred EcCCCCcccc---------ch-------hHhHHHHHHHHHHhCCCce
Q 021470 81 CAISGVHIRS---------HQ-------ILLQLKLVDAIKEAGNVKR 111 (312)
Q Consensus 81 ~~~~~~~~~~---------~~-------~~~~~~l~~aa~~~~~v~~ 111 (312)
|+++...... .+ .....+++++|+++| ++.
T Consensus 74 n~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~~ 119 (450)
T 1ff9_A 74 SLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-ITV 119 (450)
T ss_dssp ECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CEE
T ss_pred ECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-CeE
Confidence 9998643110 11 235688999999998 653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.9e-09 Score=92.91 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=78.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHh-hhhcc---CCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQML-LSFKE---QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
|++|+|+|| |++|+.+++.|++.| .+|.+.+|+ +++.+.+ +.+.. .++..+.+|++|.+++.+++++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~-----~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRT-----LSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESC-----HHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECC-----HHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 469999998 999999999999998 389999998 6666433 23332 3689999999999999999987
Q ss_pred --CCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCC
Q 021470 76 --VDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEF 117 (312)
Q Consensus 76 --~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~ 117 (312)
+|+|||+++... ...++++|.++| +..+-.+.+
T Consensus 75 ~~~DvVin~ag~~~--------~~~v~~a~l~~g-~~vvD~a~~ 109 (405)
T 4ina_A 75 VKPQIVLNIALPYQ--------DLTIMEACLRTG-VPYLDTANY 109 (405)
T ss_dssp HCCSEEEECSCGGG--------HHHHHHHHHHHT-CCEEESSCC
T ss_pred hCCCEEEECCCccc--------ChHHHHHHHHhC-CCEEEecCC
Confidence 999999998532 357889999999 554434443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.04 E-value=4e-09 Score=96.61 Aligned_cols=213 Identities=12% Similarity=0.084 Sum_probs=123.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC----CChHHHH-HhhhhccCCCeEEEccCCCHHHHHHH-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG----VDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNA----- 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~----- 72 (312)
.++++||||++.||+++++.|+++|++|++.+|+... ...++.+ ..+.+...+-.. .+|+.|.+++.++
T Consensus 8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999998775310 0011221 123333333332 3566665333322
Q ss_pred --hccCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 73 --VKLVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 73 --~~~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
+.++|++||+||..... ++|+.+...+.+++ ++.+ -.++|. ||...... .|.
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~------~~~ 159 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYG------NFG 159 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC------CTT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC------CCC
Confidence 33699999999964321 15666655555544 4444 356775 44221111 112
Q ss_pred C-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 132 R-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
. .|..+|..+..+.+. .|+.+..|.|+. ........ .. .........+|+|.++
T Consensus 160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~T~m~~~~-------~~----------~~~~~~~~pe~vA~~v 221 (604)
T 2et6_A 160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-RSRMTESI-------MP----------PPMLEKLGPEKVAPLV 221 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCHHHHTT-------SC----------HHHHTTCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-cCcccccc-------CC----------hhhhccCCHHHHHHHH
Confidence 3 344599998766553 578888888863 11111100 00 0011235789999999
Q ss_pred HHHhcCCcc-CCceEEecC-----------------CCCcCCHHHHHHHHHHHhCC
Q 021470 204 MKAINDPRT-LNRTMYLRP-----------------PKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 204 ~~~l~~~~~-~~~~~~~~~-----------------~~~~~s~~e~~~~~~~~~g~ 241 (312)
+.++..... .|+.+.+.| .+...+..++.+.+.++...
T Consensus 222 ~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 277 (604)
T 2et6_A 222 LYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY 277 (604)
T ss_dssp HHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred HHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence 999876532 244444432 22356889999988887643
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-09 Score=102.24 Aligned_cols=151 Identities=15% Similarity=0.200 Sum_probs=105.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHH-hCCC-eEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASL-ALGH-ETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||+|.||+.+++.|. ++|. +|++++|+.... +...+..+.+.. .++.++++|++|.+++.++++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAA-SGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccch-HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 4689999999999999999999 7897 588899984322 112223344433 357889999999999999886
Q ss_pred --cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCC-chhh
Q 021470 75 --LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGR-VTFD 136 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~-~~~~ 136 (312)
.+|++||+++..... ..|+.++.++.+++ ... . +||. ||...... .|.. .|..
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~-l-~iV~~SS~ag~~g------~~g~~~YaA 679 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPD-V-ALVLFSSVSGVLG------SGGQGNYAA 679 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTT-S-EEEEEEETHHHHT------CSSCHHHHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhC-C-EEEEEccHHhcCC------CCCCHHHHH
Confidence 369999999976431 26788889998887 223 4 5554 54322111 1123 4444
Q ss_pred hHHHHHHHHH---HhCCCeEEEeccccccc
Q 021470 137 DKMVVRKAIE---DAGIPFTYVSANCFAGY 163 (312)
Q Consensus 137 ~K~~~e~~~~---~~~~~~~i~r~~~~~~~ 163 (312)
+|...+.+.+ ..|++++.|.||.+...
T Consensus 680 aka~~~alA~~~~~~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 680 ANSFLDALAQQRQSRGLPTRSLAWGPWAEH 709 (795)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHHcCCeEEEEECCeECcc
Confidence 8877665554 46899999999987643
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.00 E-value=5.7e-09 Score=77.00 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=73.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
.|+|+|+|+ |++|+.+++.|.+.|++|++++|+ +++.+.+.. ..++.++.+|..+++.+.++ ++++|+||+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~-----~~~~~~~~~--~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHHH--hcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 478999995 999999999999999999999998 655532221 23778889999999888765 678999999
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+++.. .....+.+.++..+ ..++|.
T Consensus 76 ~~~~~-------~~~~~~~~~~~~~~-~~~ii~ 100 (140)
T 1lss_A 76 VTGKE-------EVNLMSSLLAKSYG-INKTIA 100 (140)
T ss_dssp CCSCH-------HHHHHHHHHHHHTT-CCCEEE
T ss_pred eeCCc-------hHHHHHHHHHHHcC-CCEEEE
Confidence 97643 12235666777777 667765
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4e-09 Score=89.17 Aligned_cols=104 Identities=16% Similarity=0.118 Sum_probs=75.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+|||+|+||+|++|..++..|+++| ++|++++++ +++... ..+...... .+.+ +.+.+++.++++++|+|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~-----~~~~~~-~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV-----NAPGVT-ADISHMDTGAVVRG-FLGQQQLEAALTGMDLI 80 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS-----SHHHHH-HHHHTSCSSCEEEE-EESHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC-----CcHhHH-HHhhcccccceEEE-EeCCCCHHHHcCCCCEE
Confidence 4799999999999999999999988 899999876 322211 222221111 1222 33467788899999999
Q ss_pred EEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
||+++..... ..|+..++++++++.+.+ .+.+|+
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~vi 122 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVN 122 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEE
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 9999865421 267889999999999998 665554
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=5.7e-09 Score=104.06 Aligned_cols=211 Identities=10% Similarity=0.055 Sum_probs=124.2
Q ss_pred CcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEECCCCCCChHHH-H----Hhhhhc--cCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGY-LGKRLVKASLALGHETYVLHRPEIGVDIEKV-Q----MLLSFK--EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~----~~~~l~--~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.++++||||+|. ||+++++.|++.|++|++++++. .++. + ....+. ...+.++.+|++|.+++.++++
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~----~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRF----SRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSC----CHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCC----hHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 478999999999 99999999999999999986442 2222 1 112232 2357889999999999888763
Q ss_pred -----------cCCEEEEcCCCCccc-----------------cchhHhHHHHHHHHHHhCC-----Cceeec-CCCCCC
Q 021470 75 -----------LVDVVICAISGVHIR-----------------SHQILLQLKLVDAIKEAGN-----VKRFLP-SEFGTD 120 (312)
Q Consensus 75 -----------~~d~v~~~~~~~~~~-----------------~~~~~~~~~l~~aa~~~~~-----v~~~v~-S~~g~~ 120 (312)
++|++||++|..... .+|+.+..+++++++.... -.+||+ |+....
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence 489999999964321 1456666666665332210 135664 443221
Q ss_pred cccccccCCCCCchhhhHHHHHHHHHH-----h--CCCeEEEeccccc-ccccccCCCCCccCCCCCeeEEeCCCCccee
Q 021470 121 PAKMANAMEPGRVTFDDKMVVRKAIED-----A--GIPFTYVSANCFA-GYFLGGLCQPGSILPSKDSVVLLGDGNPKAI 192 (312)
Q Consensus 121 ~~~~~~~~~p~~~~~~~K~~~e~~~~~-----~--~~~~~i~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (312)
... ...|..+|..++.+.+. . +++++.+.||++. ....... .. .. . ... .....
T Consensus 808 ~gg-------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~----~~-~---~~~--~~plr 869 (1878)
T 2uv9_A 808 FGN-------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NL----VA-E---GVE--KLGVR 869 (1878)
T ss_dssp SSC-------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HH----TH-H---HHH--TTTCC
T ss_pred cCC-------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hh----hH-H---HHH--hcCCC
Confidence 111 24566699998877542 1 2566777888765 3221110 00 00 0 000 00112
Q ss_pred eeeHHHHHHHHHHHhcCCc---cCCceEEe--cCC-CCcCCHHHHHHHH
Q 021470 193 YVDEDDIAMYTMKAINDPR---TLNRTMYL--RPP-KNILSQREVVETW 235 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~~---~~~~~~~~--~~~-~~~~s~~e~~~~~ 235 (312)
..+.+|+|++++.++.... ..|..+.+ .|. .....+.++...+
T Consensus 870 ~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 870 TFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp CBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 3489999999998886542 12455554 222 1224556655444
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.97 E-value=5.7e-09 Score=89.97 Aligned_cols=91 Identities=21% Similarity=0.324 Sum_probs=74.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|||+|+|| |++|+.+++.|.+ .++|.+.+|+ .++.+.. ...+..+..|+.|.+++.++++++|+|+++
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~-----~~~~~~~----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVN-----NENLEKV----KEFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESC-----HHHHHHH----TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcC-----HHHHHHH----hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 478999997 9999999988755 5899999998 5555332 346788899999999999999999999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+++.. ...++++|.++| .+++-
T Consensus 85 ~p~~~--------~~~v~~~~~~~g--~~yvD 106 (365)
T 3abi_A 85 LPGFL--------GFKSIKAAIKSK--VDMVD 106 (365)
T ss_dssp CCGGG--------HHHHHHHHHHHT--CEEEE
T ss_pred cCCcc--------cchHHHHHHhcC--cceEe
Confidence 87642 457899999999 56664
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.4e-08 Score=84.51 Aligned_cols=84 Identities=18% Similarity=0.116 Sum_probs=62.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCCChH--------HHHHhhhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIE--------KVQMLLSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~--------~~~~~~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.++++||||++.||+++++.|++ .|.+|.++.|+....... .....+.+. ...+..+.+|++|++++.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 126 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL 126 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 47899999999999999999999 999999998875443110 010111121 3457789999999988887
Q ss_pred Hhc-------cCCEEEEcCCCC
Q 021470 72 AVK-------LVDVVICAISGV 86 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~ 86 (312)
+++ ++|+++|+++..
T Consensus 127 ~v~~i~~~~G~IDiLVNNAG~~ 148 (405)
T 3zu3_A 127 TIDAIKQDLGQVDQVIYSLASP 148 (405)
T ss_dssp HHHHHHHHTSCEEEEEECCCCS
T ss_pred HHHHHHHHcCCCCEEEEcCccc
Confidence 765 589999998863
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=89.53 Aligned_cols=79 Identities=24% Similarity=0.205 Sum_probs=65.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++||||+|.+|++++..|++.|.+|+++.|+ +++.+.+ +.+.. .++.++.+|++|++++.++++.+|+||
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~-----~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlV 193 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 193 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEE
Confidence 5789999999999999999999999999999998 5555422 22221 357788999999999999999999999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
|+++..
T Consensus 194 n~ag~g 199 (287)
T 1lu9_A 194 TAGAIG 199 (287)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999853
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3.6e-08 Score=85.66 Aligned_cols=84 Identities=17% Similarity=0.075 Sum_probs=62.9
Q ss_pred CcEEEEEcCCchhhHH--HHHHHHhCCCeEEEEECCCCCCC----------hHHHHHhhhhccCCCeEEEccCCCHHHHH
Q 021470 3 KSKVLIIGGTGYLGKR--LVKASLALGHETYVLHRPEIGVD----------IEKVQMLLSFKEQGAKLVSGSFNDYQSLV 70 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~l~~~~~~~v~~D~~d~~~l~ 70 (312)
.++++||||++.||++ +++.|.+.|.+|+++.|+..... .+............+..+++|++|++++.
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~ 139 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD 139 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence 4789999999999999 99999999999999999754421 01111111112345788999999998888
Q ss_pred HHhc-------cCCEEEEcCCCC
Q 021470 71 NAVK-------LVDVVICAISGV 86 (312)
Q Consensus 71 ~~~~-------~~d~v~~~~~~~ 86 (312)
++++ ++|++||+++..
T Consensus 140 ~~v~~i~~~~G~IDiLVnNAG~~ 162 (418)
T 4eue_A 140 KVIKYIKDEFGKIDLFVYSLAAP 162 (418)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHcCCCCEEEECCccc
Confidence 7764 589999998863
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-08 Score=78.83 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=74.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH--hccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA--VKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~--~~~~d~v 79 (312)
.++|+|+| .|.+|..+++.|.+. |++|++++|+ +++.+. +...++.++.+|.++++.+.++ ++++|.|
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~-----~~~~~~---~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIR-----EEAAQQ---HRSEGRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESC-----HHHHHH---HHHTTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECC-----HHHHHH---HHHCCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 35899999 799999999999999 9999999998 766643 4456888999999999988887 7899999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
|.+.+.. .....++..++..+...+++.
T Consensus 110 i~~~~~~-------~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 110 LLAMPHH-------QGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp EECCSSH-------HHHHHHHHHHHHTTCCSEEEE
T ss_pred EEeCCCh-------HHHHHHHHHHHHHCCCCEEEE
Confidence 9987642 334456667777663334443
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.8e-08 Score=74.73 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=73.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-cCCCeEEEccCCCHHHHHHH-hccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-EQGAKLVSGSFNDYQSLVNA-VKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~~~~~~v~~D~~d~~~l~~~-~~~~d~v~ 80 (312)
.++|+|+| .|.+|..+++.|.+.|++|++++|+ +++. +.+. ..++.++.+|..+++.+.++ +.++|+||
T Consensus 19 ~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~-----~~~~---~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 19 SKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKN-----EYAF---HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----GGGG---GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHH---HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 47899999 5999999999999999999999998 4444 3344 45788888999998888776 77899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHH-hCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKE-AGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~-~~~v~~~v~ 114 (312)
.+.+.. .....++..++. .+ ..+++.
T Consensus 90 ~~~~~~-------~~~~~~~~~~~~~~~-~~~iv~ 116 (155)
T 2g1u_A 90 AFTNDD-------STNFFISMNARYMFN-VENVIA 116 (155)
T ss_dssp ECSSCH-------HHHHHHHHHHHHTSC-CSEEEE
T ss_pred EEeCCc-------HHHHHHHHHHHHHCC-CCeEEE
Confidence 998753 233456666666 45 556654
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.5e-08 Score=88.24 Aligned_cols=76 Identities=25% Similarity=0.313 Sum_probs=64.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+++|+|+|+ |++|+.+++.|++. |++|++++|+ +++++.+... .++..+.+|+.|.+++.++++++|+|||
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~-----~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~~~DvVIn 94 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRT-----LANAQALAKP--SGSKAISLDVTDDSALDKVLADNDVVIS 94 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESS-----HHHHHHHHGG--GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECC-----HHHHHHHHHh--cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence 678999996 99999999999998 6899999998 7776443222 3677889999999999999999999999
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
+++..
T Consensus 95 ~tp~~ 99 (467)
T 2axq_A 95 LIPYT 99 (467)
T ss_dssp CSCGG
T ss_pred CCchh
Confidence 99865
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.82 E-value=8.1e-09 Score=87.53 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=73.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-------ETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
+|||+||||+|++|++++..|+..|+ +|++++++.... .++.+ ....+.+....+ ..|+...+++.++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~-~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKA-QKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHH-HHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccc-cccchhhHHHHhhhcccc-cCcEEEecCcHHHhC
Confidence 47999999999999999999999884 788876651000 11121 112233221111 245555566788899
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCc-eeec
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVK-RFLP 114 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~-~~v~ 114 (312)
++|+|||+++..... ..|+..+++++++++++++.+ ++++
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~ 131 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLV 131 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999999999965422 267888999999999983133 5554
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.81 E-value=1e-07 Score=70.23 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=72.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
+++|+|+| .|.+|+.+++.|.+.|++|+++.++ +++.+ .+...++.++.+|.++++.+.++ +.++|.|+.
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~-----~~~~~---~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETS-----RTRVD---ELRERGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESC-----HHHHH---HHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECC-----HHHHH---HHHHcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 36899999 6999999999999999999999998 77763 34457899999999999998875 568999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.+... ....++..+++.....++|
T Consensus 78 ~~~~~~-------~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 78 TIPNGY-------EAGEIVASARAKNPDIEII 102 (140)
T ss_dssp CCSCHH-------HHHHHHHHHHHHCSSSEEE
T ss_pred ECCChH-------HHHHHHHHHHHHCCCCeEE
Confidence 877532 2233445566553233444
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.79 E-value=8.4e-08 Score=82.83 Aligned_cols=83 Identities=18% Similarity=0.190 Sum_probs=61.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCCChH--------HHHHhhhhc--cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIE--------KVQMLLSFK--EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~--------~~~~~~~l~--~~~~~~v~~D~~d~~~l~~ 71 (312)
.+++|||||++.||+++++.|.+ .|.+|.++.|+....... .....+.+. ...+..+.+|++|++++.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 46899999999999999999999 999999999875543110 000111122 3457789999999987776
Q ss_pred Hh--------ccCCEEEEcCCC
Q 021470 72 AV--------KLVDVVICAISG 85 (312)
Q Consensus 72 ~~--------~~~d~v~~~~~~ 85 (312)
++ .++|++||+++.
T Consensus 141 ~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp HHHHHHHHSCSCEEEEEECCCC
T ss_pred HHHHHHHHcCCCCCEEEEcCcc
Confidence 65 357999999875
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-07 Score=75.50 Aligned_cols=95 Identities=23% Similarity=0.278 Sum_probs=73.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
|+|+|+| .|.+|+++++.|.+.|++|+++.++ +++.+.+. ...++.++.+|.++++.+.++ ++++|+|+.+
T Consensus 1 M~iiIiG-~G~~G~~la~~L~~~g~~v~vid~~-----~~~~~~l~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIG-GETTAYYLARSMLSRKYGVVIINKD-----RELCEEFA--KKLKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEEC-CHHHHHHHHHHHHHTTCCEEEEESC-----HHHHHHHH--HHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECC-----HHHHHHHH--HHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 5899999 5999999999999999999999998 77664322 134789999999999999987 6799999988
Q ss_pred CCCCccccchhHhHHHHHHHHHH-hCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKE-AGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~-~~~v~~~v~ 114 (312)
.+... ....++..+++ .+ ..++|.
T Consensus 73 ~~~d~-------~n~~~~~~a~~~~~-~~~iia 97 (218)
T 3l4b_C 73 TPRDE-------VNLFIAQLVMKDFG-VKRVVS 97 (218)
T ss_dssp CSCHH-------HHHHHHHHHHHTSC-CCEEEE
T ss_pred cCCcH-------HHHHHHHHHHHHcC-CCeEEE
Confidence 76532 23345555665 45 667664
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=99.40 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=103.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||+|.||+++++.|.++|.+ |++++|+.... .......+.+.. .++.++.+|++|.+++.++++
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRT-GYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCS-HHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcch-HHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 468999999999999999999999986 77778875443 222222333333 346778899999988888764
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCC-chhh
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGR-VTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~-~~~~ 136 (312)
.+|++||+|+..... ..|+.++.++.+++...- ...+||. ||...... .|.. .|..
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g------~~g~~~Y~a 2036 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG------NAGQANYGF 2036 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT------CTTCHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC------CCCcHHHHH
Confidence 589999999964321 278889999988877642 1346664 54221111 1123 4555
Q ss_pred hHHHHHHHHH---HhCCCeEEEecccccc
Q 021470 137 DKMVVRKAIE---DAGIPFTYVSANCFAG 162 (312)
Q Consensus 137 ~K~~~e~~~~---~~~~~~~i~r~~~~~~ 162 (312)
+|..++.+.+ ..|++...+-.+.+.+
T Consensus 2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2037 ANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 9999888776 4688887776665543
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=1.9e-07 Score=78.56 Aligned_cols=95 Identities=20% Similarity=0.173 Sum_probs=66.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEEC--CCCCCChHHHHH-hhhhcc------CCCeEEEccCCCHHHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHR--PEIGVDIEKVQM-LLSFKE------QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~l~~~ 72 (312)
|||+||||+|++|++++..|+..|. ++..+++ + .++.+. ...+.. ..+.+...+ +++.++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a 71 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS-----INKLEGLREDIYDALAGTRSDANIYVES----DENLRI 71 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG-----HHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCc-----hhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence 4899999999999999999998884 6777777 4 333321 111111 122332211 235667
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++++|+|||+++..... ..|+..++++++++++++
T Consensus 72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~ 114 (313)
T 1hye_A 72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC 114 (313)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999965421 268889999999999987
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.59 E-value=2.4e-07 Score=74.62 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=72.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
.++|+|+|+ |.+|+.+++.|.+.|+ |+++.|+ +++.+ .+. .++.++.+|.+|++.+.++ ++++|.|+.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~-----~~~~~---~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDE-----NVRKK---VLR-SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCG-----GGHHH---HHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECC-----HHHHH---HHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 368999995 9999999999999999 9999887 65553 233 6799999999999999887 789999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCc-eeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVK-RFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~-~~v~ 114 (312)
+.+.. .....++..|++.+ .+ ++|.
T Consensus 78 ~~~~d-------~~n~~~~~~a~~~~-~~~~iia 103 (234)
T 2aef_A 78 DLESD-------SETIHCILGIRKID-ESVRIIA 103 (234)
T ss_dssp CCSCH-------HHHHHHHHHHHHHC-SSSEEEE
T ss_pred cCCCc-------HHHHHHHHHHHHHC-CCCeEEE
Confidence 87642 23445666777777 54 5543
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.59 E-value=3.8e-07 Score=76.27 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=68.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEEC--CCCCCChHHHHH-hhhhcc-----CCCeEEEccCCCHHHHHHHh
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHR--PEIGVDIEKVQM-LLSFKE-----QGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~l~~~~ 73 (312)
|||+|+||+|++|+.++..|+..++ ++..+++ + +++.+. ...+.+ .++.+.. + + .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~-----~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK-----EDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG-----HHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCC-----hhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh
Confidence 5899999999999999999998885 6777776 4 333321 112211 2334333 2 2 3458
Q ss_pred ccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeec
Q 021470 74 KLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+++|+|||+++..... ..|+..++++++++++++ .+.+++
T Consensus 69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~vi 116 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISL 116 (303)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEE
T ss_pred CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEE
Confidence 8999999999976432 267889999999999987 665554
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=8.7e-07 Score=70.00 Aligned_cols=74 Identities=15% Similarity=0.159 Sum_probs=55.9
Q ss_pred CCCcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC
Q 021470 1 MEKSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64 (312)
Q Consensus 1 M~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~ 64 (312)
|..++|+|||| +|.+|.+++++|.+.|++|++++|+.... . ..++. ..|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~----------~-~~g~~--~~dv~ 72 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFVK--RVDVM 72 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTEE--EEECC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc----------c-CCCCe--EEccC
Confidence 44689999999 69999999999999999999998864211 0 12333 46788
Q ss_pred CHHHHHHH----hccCCEEEEcCCCCc
Q 021470 65 DYQSLVNA----VKLVDVVICAISGVH 87 (312)
Q Consensus 65 d~~~l~~~----~~~~d~v~~~~~~~~ 87 (312)
+.+++.+. +.++|++|++|+...
T Consensus 73 ~~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 73 TALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence 87655544 347999999999754
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.45 E-value=9e-07 Score=70.09 Aligned_cols=76 Identities=20% Similarity=0.260 Sum_probs=55.6
Q ss_pred CcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH
Q 021470 3 KSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 66 (312)
.++|+|||| +|.+|.+++++|+++|++|+.++|+.... + ....++..+ |+...
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~--------~~~~~~~~~--~v~s~ 71 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P--------EPHPNLSIR--EITNT 71 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C--------CCCTTEEEE--ECCSH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c--------cCCCCeEEE--EHhHH
Confidence 579999999 99999999999999999999999974321 0 002344444 55555
Q ss_pred HHHH----HHhccCCEEEEcCCCCccc
Q 021470 67 QSLV----NAVKLVDVVICAISGVHIR 89 (312)
Q Consensus 67 ~~l~----~~~~~~d~v~~~~~~~~~~ 89 (312)
+++. +.+.++|++|++|+...+.
T Consensus 72 ~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 72 KDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp HHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 4443 3455799999999976643
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2.1e-06 Score=74.77 Aligned_cols=89 Identities=25% Similarity=0.338 Sum_probs=72.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
.++|+|+| .|.+|+.+++.|.+.|++|+++.++ +++.+ .+...++.++.+|.++++.+.++ +.++|+||.
T Consensus 4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d-----~~~v~---~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHD-----PDHIE---TLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECC-----HHHHH---HHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHHH---HHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 36799999 6999999999999999999999999 77764 34456899999999999999987 778999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhC
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
+.+. -.....++..+++.+
T Consensus 75 ~~~~-------~~~n~~i~~~ar~~~ 93 (413)
T 3l9w_A 75 AIDD-------PQTNLQLTEMVKEHF 93 (413)
T ss_dssp CCSS-------HHHHHHHHHHHHHHC
T ss_pred CCCC-------hHHHHHHHHHHHHhC
Confidence 8865 234455666666665
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=74.56 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=60.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-----C-eEEEEECCCCCCChHHHH-Hhhhhcc-CCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-----H-ETYVLHRPEIGVDIEKVQ-MLLSFKE-QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~l~~~ 72 (312)
|+|++|+|+||||++|+.+++.|++++ + +++.+.+..+... +.. ....+.. ..+.+ .|+ +++.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk--~~~~~~~~l~~~~~~~~--~~~-~~~~---- 77 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS--TLGEHHPHLTPLAHRVV--EPT-EAAV---- 77 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS--BGGGTCTTCGGGTTCBC--EEC-CHHH----
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC--chhhhcccccccceeee--ccC-CHHH----
Confidence 667899999999999999999999887 4 7888764322110 000 0000111 12222 233 3332
Q ss_pred hccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 73 VKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+.++|+||.+++... ...++.++ ++| ++.+..|+
T Consensus 78 ~~~~DvVf~alg~~~--------s~~~~~~~-~~G-~~vIDlSa 111 (352)
T 2nqt_A 78 LGGHDAVFLALPHGH--------SAVLAQQL-SPE-TLIIDCGA 111 (352)
T ss_dssp HTTCSEEEECCTTSC--------CHHHHHHS-CTT-SEEEECSS
T ss_pred hcCCCEEEECCCCcc--------hHHHHHHH-hCC-CEEEEECC
Confidence 558999999988653 45677777 778 65444554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.1e-06 Score=71.00 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=67.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~l~~~~~~~d~ 78 (312)
|||+|+||+|++|..++..|+..| ++|.+++++. .+.. ...+.+.... .++.. .+++.++++++|+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-----~~~~-a~dL~~~~~~---~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-----TPGV-AADLSHIETR---ATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-----HHHH-HHHHTTSSSS---CEEEEEESGGGHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-----cHHH-HHHHhccCcC---ceEEEecCCCCHHHHhCCCCE
Confidence 489999999999999999999888 7999999973 1221 1223222111 11211 2457778999999
Q ss_pred EEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
||++++..... ..|....+.+++.+.+..
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 108 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC 108 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999876422 156678889999988876
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=3.1e-06 Score=89.16 Aligned_cols=84 Identities=8% Similarity=0.056 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCch-hhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-HhhhhccC--CCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGY-LGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFKEQ--GAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~~~--~~~~v~~D~~d~~~l~~~~~--- 74 (312)
..++++||||++. ||+++++.|++.|.+|++.+|+......+..+ ..+.+... .+..+++|++|++++.++++
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 3578999999999 99999999999999999999974320000011 22233322 36678999999988887742
Q ss_pred --------cCCEEEEcCCC
Q 021470 75 --------LVDVVICAISG 85 (312)
Q Consensus 75 --------~~d~v~~~~~~ 85 (312)
++|++||+|+.
T Consensus 2215 ~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2215 TEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp SCCEEEESSSEEEECCCCC
T ss_pred hhhhhhcCCCCEEEECCCc
Confidence 47999999986
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=3e-06 Score=71.88 Aligned_cols=94 Identities=19% Similarity=0.162 Sum_probs=57.4
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+ +++|+|+||||.+|+.+++.|++++| +++++....+.. +.+.-.+..+...|. +++ .+.++
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g--------~~~~~~g~~i~~~~~-~~~----~~~~~ 69 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG--------QRMGFAESSLRVGDV-DSF----DFSSV 69 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT--------CEEEETTEEEECEEG-GGC----CGGGC
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC--------CccccCCcceEEecC-CHH----HhcCC
Confidence 44 47999999999999999999997654 556664321110 001111212211222 222 25689
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
|+||.+++.. ....++..+.++| ++.+..|.
T Consensus 70 DvV~~a~g~~--------~s~~~a~~~~~aG-~kvId~Sa 100 (340)
T 2hjs_A 70 GLAFFAAAAE--------VSRAHAERARAAG-CSVIDLSG 100 (340)
T ss_dssp SEEEECSCHH--------HHHHHHHHHHHTT-CEEEETTC
T ss_pred CEEEEcCCcH--------HHHHHHHHHHHCC-CEEEEeCC
Confidence 9999998743 3567788888889 77655553
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.21 E-value=6.4e-06 Score=72.90 Aligned_cols=96 Identities=13% Similarity=0.234 Sum_probs=72.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
.|+|+|.| .|.+|+++++.|.+.||+|+++.++ +++.+.+. ...++.++.||.++++.|.++ ++.+|.++-
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d-----~~~~~~~~--~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKD-----GDRLRELQ--DKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESC-----HHHHHHHH--HHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECC-----HHHHHHHH--HhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 58999999 7999999999999999999999998 77764322 134789999999999999998 568999887
Q ss_pred cCCCCccccchhHhHHHHHHHHHHh-CCCceeec
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEA-GNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~-~~v~~~v~ 114 (312)
+.+... ...-.+..|++. + +++.+.
T Consensus 75 ~t~~De-------~Nl~~~~~Ak~~~~-~~~~ia 100 (461)
T 4g65_A 75 VTNTDE-------TNMAACQVAFTLFN-TPNRIA 100 (461)
T ss_dssp CCSCHH-------HHHHHHHHHHHHHC-CSSEEE
T ss_pred EcCChH-------HHHHHHHHHHHhcC-Ccccee
Confidence 655421 122334445554 4 666553
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.7e-06 Score=72.94 Aligned_cols=103 Identities=16% Similarity=0.102 Sum_probs=67.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--e-----EEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--E-----TYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.+||+||||+|++|++++..|+..+. + ++++++... .++.+ ...++.+....+. .++...+...+.++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~---~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM---MGVLDGVLMELQDCALPLL-KDVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc---cccchhhHhhhHhhhhccc-CCEEEcCCcHHHhC
Confidence 47999999999999999999988773 5 888877521 11221 1122332211111 12222224556688
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCc
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~ 110 (312)
++|+||++++..... ..|....+++++++++++ .+
T Consensus 79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~ 121 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KK 121 (333)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CT
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 999999999865321 268888999999999998 44
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=98.19 E-value=4.8e-06 Score=70.80 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=72.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++++|+| .|.+|+.+++.|.+.|+ |+++.++ +++.+ +...++.++.+|.+|++.+.++ ++++|.|+.+
T Consensus 116 ~~viI~G-~G~~g~~l~~~L~~~g~-v~vid~~-----~~~~~----~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICG-WSESTLECLRELRGSEV-FVLAEDE-----NVRKK----VLRSGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEES-CCHHHHHHHTTGGGSCE-EEEESCG-----GGHHH----HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCc-EEEEeCC-----hhhhh----HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 4799999 59999999999999999 9999887 66663 4457899999999999999988 7899999988
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCc-eee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVK-RFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~-~~v 113 (312)
.+. -.....++..+++.+ .+ +++
T Consensus 185 ~~~-------d~~n~~~~~~ar~~~-~~~~ii 208 (336)
T 1lnq_A 185 LES-------DSETIHCILGIRKID-ESVRII 208 (336)
T ss_dssp CSS-------HHHHHHHHHHHHTTC-TTSEEE
T ss_pred CCc-------cHHHHHHHHHHHHHC-CCCeEE
Confidence 753 233445666677776 44 444
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.19 E-value=1e-05 Score=68.45 Aligned_cols=100 Identities=10% Similarity=0.132 Sum_probs=66.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHH-hhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQM-LLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|+++||.|+|++|++|+.++..|+..| .+|.+++.+ .+|.+- ...+.+.... ..++.-..++.++++++|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-----~~k~~g~a~DL~~~~~~--~~~i~~t~d~~~al~dAD 78 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-----AVGLEGVAEEIRHCGFE--GLNLTFTSDIKEALTDAK 78 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-----HHHHHHHHHHHHHHCCT--TCCCEEESCHHHHHTTEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-----chhHHHHHHhhhhCcCC--CCceEEcCCHHHHhCCCC
Confidence 457899999999999999999999988 589999887 554431 1122211110 001111124556788999
Q ss_pred EEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 78 VVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 78 ~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+||.+++..... ..|....+.+++++.+..
T Consensus 79 vVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~ 116 (343)
T 3fi9_A 79 YIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC 116 (343)
T ss_dssp EEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999865421 267777889999998887
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=9.7e-07 Score=69.88 Aligned_cols=74 Identities=30% Similarity=0.310 Sum_probs=50.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|+||+|++|+.+++.|++.|++|++++|+ +++.+.+.......+. ..|+. .+++.++++++|+||+++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~-----~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 489999999999999999999999999999998 5555332211000000 01111 124556677899999998
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
..
T Consensus 73 ~~ 74 (212)
T 1jay_A 73 PW 74 (212)
T ss_dssp CH
T ss_pred Ch
Confidence 74
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.15 E-value=9.4e-06 Score=69.84 Aligned_cols=75 Identities=24% Similarity=0.364 Sum_probs=59.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|+ |.+|..+++.|...|.+|++++|+ +++.+..... .+.. +.+|..+.+++.++++++|+||++
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~-----~~~~~~~~~~--~g~~-~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVN-----HKRLQYLDDV--FGGR-VITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH--TTTS-EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHh--cCce-EEEecCCHHHHHHHHhCCCEEEEC
Confidence 478999998 999999999999999999999998 6666443321 1333 466778888999999999999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
++..
T Consensus 237 ~g~~ 240 (369)
T 2eez_A 237 VLVP 240 (369)
T ss_dssp CC--
T ss_pred CCCC
Confidence 9864
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.11 E-value=1.9e-05 Score=67.15 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=62.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHH-hCCCeEEEEECCCCCCCh--------HHHHHhhhh--ccCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASL-ALGHETYVLHRPEIGVDI--------EKVQMLLSF--KEQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~--------~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~ 71 (312)
.|++|||||++.+|.+.+.+|. +.|..|.++.|....... ......+.. ....+..+.+|+.|++.+.+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 4789999999999999999887 678999999887544310 001111111 24567889999999988888
Q ss_pred Hhc-------cCCEEEEcCCCC
Q 021470 72 AVK-------LVDVVICAISGV 86 (312)
Q Consensus 72 ~~~-------~~d~v~~~~~~~ 86 (312)
+++ ++|+++|+++..
T Consensus 130 vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 130 VIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHhcCCCCEEEEecccc
Confidence 775 689999999975
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.3e-05 Score=63.01 Aligned_cols=97 Identities=10% Similarity=0.102 Sum_probs=64.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----cCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-----LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-----~~d 77 (312)
|+|+|+|++|.+|+.+++.+.+. ++++.+......+. + .+...+.. +..|++.++...+.+. +++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl--~------~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPL--S------LLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCT--H------HHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCH--H------HHhccCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence 48999999999999999999866 79999877654332 1 11112344 5678888766665442 788
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHh-CCCceeecCC
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEA-GNVKRFLPSE 116 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~-~~v~~~v~S~ 116 (312)
+|+-+.+.. .+....+.++|+++ + ++.++.+.
T Consensus 72 ~VigTTG~~------~e~~~~l~~aa~~~~~-~~vv~a~N 104 (245)
T 1p9l_A 72 AVVGTTGFT------AERFQQVESWLVAKPN-TSVLIAPN 104 (245)
T ss_dssp EEECCCCCC------HHHHHHHHHHHHTSTT-CEEEECSC
T ss_pred EEEcCCCCC------HHHHHHHHHHHHhCCC-CCEEEECC
Confidence 888877643 23445566666655 5 66555443
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.1e-05 Score=63.91 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=52.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|+|+| +|.+|+.+++.|.+.|++|++++|+ +++.+ .+...++... ++.++++++|+||.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~-----~~~~~---~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRN-----PKRTA---RLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS-----HHHHH---HHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHH---HHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 47899999 9999999999999999999999998 66653 3333455442 345667899999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
....
T Consensus 91 v~~~ 94 (215)
T 2vns_A 91 VFRE 94 (215)
T ss_dssp SCGG
T ss_pred CChH
Confidence 8754
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.10 E-value=6.8e-06 Score=67.15 Aligned_cols=100 Identities=20% Similarity=0.159 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+|++|+|+|++|.+|+.+++.+.+. ++++.+. +|+.+...-... ..+. +... ++.-.+++.+++.++|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~---gel~--g~~~---gv~v~~dl~~ll~~~DV 76 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDA---GAFL--GKQT---GVALTDDIERVCAEADY 76 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBT---TTTT--TCCC---SCBCBCCHHHHHHHCSE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccH---HHHh--CCCC---CceecCCHHHHhcCCCE
Confidence 77899999999999999999999876 4787775 554321100000 0010 1110 11112244555668999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
||.++. .......++.|.++| + ++|..+.|
T Consensus 77 VIDfT~--------p~a~~~~~~~al~~G-~-~vVigTTG 106 (272)
T 4f3y_A 77 LIDFTL--------PEGTLVHLDAALRHD-V-KLVIGTTG 106 (272)
T ss_dssp EEECSC--------HHHHHHHHHHHHHHT-C-EEEECCCC
T ss_pred EEEcCC--------HHHHHHHHHHHHHcC-C-CEEEECCC
Confidence 999874 344567788888889 5 45544444
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.10 E-value=7.5e-06 Score=69.54 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=58.2
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|| |++|+|.||||++|+.+++.|.+++ .+++++.+..+... +.. ....+. +.. ...+.+.+ + +.++|
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~--~~~~~~~~~~--g~~--~~~~~~~~---~-~~~vD 70 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGE--PVHFVHPNLR--GRT--NLKFVPPE---K-LEPAD 70 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTS--BGGGTCGGGT--TTC--CCBCBCGG---G-CCCCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCc--hhHHhCchhc--Ccc--cccccchh---H-hcCCC
Confidence 55 6899999999999999999999876 48888766432210 000 000011 100 11122322 2 47899
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+||.+++... ...++..+.++| ++.+-.|+
T Consensus 71 vV~~a~g~~~--------s~~~a~~~~~aG-~~VId~Sa 100 (345)
T 2ozp_A 71 ILVLALPHGV--------FAREFDRYSALA-PVLVDLSA 100 (345)
T ss_dssp EEEECCCTTH--------HHHTHHHHHTTC-SEEEECSS
T ss_pred EEEEcCCcHH--------HHHHHHHHHHCC-CEEEEcCc
Confidence 9999987653 456677777888 65333454
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.07 E-value=7.1e-06 Score=64.10 Aligned_cols=73 Identities=26% Similarity=0.373 Sum_probs=53.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHH---HHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQ---SLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~---~l~~~~~--~~d 77 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+.+ +...+ .|..+.+ .+.+... ++|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~~-~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLSRL---GVEYV-GDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHTT---CCSEE-EETTCSTHHHHHHHHTTTCCEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCEE-eeCCcHHHHHHHHHHhCCCCCe
Confidence 3689999999999999999999999999999998 6666444333 43332 3665543 3333332 599
Q ss_pred EEEEcCC
Q 021470 78 VVICAIS 84 (312)
Q Consensus 78 ~v~~~~~ 84 (312)
++|++++
T Consensus 110 ~vi~~~g 116 (198)
T 1pqw_A 110 VVLNSLA 116 (198)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999986
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.9e-05 Score=67.37 Aligned_cols=94 Identities=23% Similarity=0.249 Sum_probs=56.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhhh-------ccCCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSF-------KEQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l-------~~~~~~~v~~D~~d~~~l~~~~ 73 (312)
+++|+|+||||++|+.+++.|.+++ .+|+++.++.... ..+.. ....+ ....+.+... |++. ++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~ 80 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSA-GKKYKDACYWFQDRDIPENIKDMVVIPT---DPKH---EE 80 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTT-TSBHHHHSCCCCSSCCCHHHHTCBCEES---CTTS---GG
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccc-cccHHHhcccccccccccCceeeEEEeC---CHHH---Hh
Confidence 4799999999999999999998876 6888887532211 00110 00000 0011111111 2222 34
Q ss_pred c-cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 74 K-LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 74 ~-~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+ ++|+||.+++.. ....++..+.++| ++ +|
T Consensus 81 ~~~~DvV~~atp~~--------~~~~~a~~~~~aG-~~-VI 111 (354)
T 1ys4_A 81 FEDVDIVFSALPSD--------LAKKFEPEFAKEG-KL-IF 111 (354)
T ss_dssp GTTCCEEEECCCHH--------HHHHHHHHHHHTT-CE-EE
T ss_pred cCCCCEEEECCCch--------HHHHHHHHHHHCC-CE-EE
Confidence 5 899999998743 3455677777788 55 55
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.9e-05 Score=65.70 Aligned_cols=93 Identities=18% Similarity=0.237 Sum_probs=58.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|+|++|+|.||||.+|+.+++.|.+++ .+++++....+.. +.+.-.+..+...|. +++ .+.++|
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G--------~~~~~~~~~i~~~~~-~~~----~~~~vD 67 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEG--------KTYRFNGKTVRVQNV-EEF----DWSQVH 67 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTT--------CEEEETTEEEEEEEG-GGC----CGGGCS
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCC--------CceeecCceeEEecC-ChH----HhcCCC
Confidence 456899999999999999999999873 5777776432111 001111112222222 222 346899
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+||.|.+.. .....+..+.++| ++.+..|
T Consensus 68 vVf~a~g~~--------~s~~~a~~~~~~G-~~vId~s 96 (336)
T 2r00_A 68 IALFSAGGE--------LSAKWAPIAAEAG-VVVIDNT 96 (336)
T ss_dssp EEEECSCHH--------HHHHHHHHHHHTT-CEEEECS
T ss_pred EEEECCCch--------HHHHHHHHHHHcC-CEEEEcC
Confidence 999998743 3566777778888 6544444
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.99 E-value=5.3e-06 Score=69.80 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=51.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE--------ccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS--------GSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~--------~D~~d~~~l~~~ 72 (312)
|+||+|+|+| .|.+|..++..|.+.|++|++++|+ +++.+.+. ..++.... .+..+.+++.++
T Consensus 1 ~~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~-----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 1 SNAMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQW-----PAHIEAIR---KNGLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HHCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHHHHHH---hCCEEEEeCCCeeEecceeecchhhccc
Confidence 4568999999 6999999999999999999999998 66654332 22333221 112233333334
Q ss_pred hccCCEEEEcCCC
Q 021470 73 VKLVDVVICAISG 85 (312)
Q Consensus 73 ~~~~d~v~~~~~~ 85 (312)
++++|+||.+...
T Consensus 72 ~~~~d~vi~~v~~ 84 (316)
T 2ew2_A 72 NEQVDLIIALTKA 84 (316)
T ss_dssp SCCCSEEEECSCH
T ss_pred CCCCCEEEEEecc
Confidence 5589999998864
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=67.94 Aligned_cols=98 Identities=12% Similarity=0.244 Sum_probs=58.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++++|+|.||+|.+|+.+++.|.++. .+++++.+..+.. .+.. ....+. +.. ..|+.-.+ .+.++++|+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g--~~~~~~~~~~~--~~v--~~dl~~~~--~~~~~~vDv 85 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG--QSMESVFPHLR--AQK--LPTLVSVK--DADFSTVDA 85 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT--SCHHHHCGGGT--TSC--CCCCBCGG--GCCGGGCSE
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC--CCHHHhCchhc--Ccc--cccceecc--hhHhcCCCE
Confidence 334789999999999999999999887 4888886643221 0110 101111 110 12332222 334568999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
||.|++... +...+..+ ++| ++.+-.|+
T Consensus 86 Vf~atp~~~--------s~~~a~~~-~aG-~~VId~sa 113 (359)
T 1xyg_A 86 VFCCLPHGT--------TQEIIKEL-PTA-LKIVDLSA 113 (359)
T ss_dssp EEECCCTTT--------HHHHHHTS-CTT-CEEEECSS
T ss_pred EEEcCCchh--------HHHHHHHH-hCC-CEEEECCc
Confidence 999987653 45666667 777 54333443
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.93 E-value=7.8e-05 Score=63.47 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=56.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+++|+|+||||++|..+++.|.+++| ++..++...+.. +.+.-.+.....-++. ++ .+.++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG--------~~~~~~~~~~~~~~~~-~~----~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG--------KSLKFKDQDITIEETT-ET----AFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTT--------CEEEETTEEEEEEECC-TT----TTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCC--------CcceecCCCceEeeCC-HH----HhcCCCEE
Confidence 47999999999999999998888765 455554332211 1111112222222222 22 25789999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
|.|++.. .....+..+.++| ++.+-.|+
T Consensus 69 f~a~~~~--------~s~~~a~~~~~~G-~~vIDlSa 96 (366)
T 3pwk_A 69 LFSAGSS--------TSAKYAPYAVKAG-VVVVDNTS 96 (366)
T ss_dssp EECSCHH--------HHHHHHHHHHHTT-CEEEECSS
T ss_pred EECCChH--------hHHHHHHHHHHCC-CEEEEcCC
Confidence 9998743 3556677777788 65444553
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00014 Score=60.99 Aligned_cols=92 Identities=23% Similarity=0.332 Sum_probs=65.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhcc------CCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKE------QGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~l~~~~ 73 (312)
+++|.|+|+ |.+|..++..|+..|. +|++++++ +++.+- ...|.. .++.+...| . +++
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~-----~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~ 71 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVN-----KEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDC 71 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecc-----hHHHHHHHHHHHhccccccCCeEEEeCc---H----HHh
Confidence 479999995 9999999999999985 89999887 655432 111211 244544333 2 357
Q ss_pred ccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 74 KLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+++|+||.+++..... ..|....+.+++++.+..
T Consensus 72 ~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~ 113 (326)
T 3pqe_A 72 KDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG 113 (326)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999865422 156677888888888876
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.9e-05 Score=65.74 Aligned_cols=68 Identities=25% Similarity=0.428 Sum_probs=43.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+ +||.++| .|..|..+++.|++.||+|+++.|+ +++. +.+...++... ++..++++++|+||
T Consensus 4 Ms-~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~-----~~~~---~~l~~~G~~~~-------~s~~e~~~~~dvvi 66 (297)
T 4gbj_A 4 MS-EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRT-----ASKA---EPLTKLGATVV-------ENAIDAITPGGIVF 66 (297)
T ss_dssp CC-CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC---------------CTTTTTTCEEC-------SSGGGGCCTTCEEE
T ss_pred CC-CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCC-----HHHH---HHHHHcCCeEe-------CCHHHHHhcCCcee
Confidence 54 5899999 9999999999999999999999998 4444 33434444332 12334455666666
Q ss_pred EcCCC
Q 021470 81 CAISG 85 (312)
Q Consensus 81 ~~~~~ 85 (312)
.+.+.
T Consensus 67 ~~l~~ 71 (297)
T 4gbj_A 67 SVLAD 71 (297)
T ss_dssp ECCSS
T ss_pred eeccc
Confidence 66554
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.88 E-value=9.5e-06 Score=59.89 Aligned_cols=71 Identities=24% Similarity=0.304 Sum_probs=52.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| +|.+|+.+++.|.+.|++|+++.|+ +++.+.+ +.+ +.... +.. ++.++++++|+||.
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~-----~~~~~~~a~~~---~~~~~--~~~---~~~~~~~~~Divi~ 86 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRN-----IDHVRAFAEKY---EYEYV--LIN---DIDSLIKNNDVIIT 86 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESC-----HHHHHHHHHHH---TCEEE--ECS---CHHHHHHTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHHh---CCceE--eec---CHHHHhcCCCEEEE
Confidence 36899999 5999999999999999889999998 7666432 222 23322 222 34556778999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+++...
T Consensus 87 at~~~~ 92 (144)
T 3oj0_A 87 ATSSKT 92 (144)
T ss_dssp CSCCSS
T ss_pred eCCCCC
Confidence 988653
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.3e-05 Score=66.48 Aligned_cols=68 Identities=22% Similarity=0.270 Sum_probs=51.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|.|+|+||.+|..+++.|.+.|++|++++|+ +++.+.+.. .++. ..+ ..++++++|+||.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~-----~~~~~~~~~---~g~~-----~~~---~~~~~~~aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA-----PEGRDRLQG---MGIP-----LTD---GDGWIDEADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS-----HHHHHHHHH---TTCC-----CCC---SSGGGGTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHh---cCCC-----cCC---HHHHhcCCCEEEEc
Confidence 4699999988999999999999999999999988 666543332 2332 122 23456789999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
....
T Consensus 75 v~~~ 78 (286)
T 3c24_A 75 LPDN 78 (286)
T ss_dssp SCHH
T ss_pred CCch
Confidence 8653
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=8.7e-05 Score=61.93 Aligned_cols=81 Identities=14% Similarity=0.061 Sum_probs=60.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+... .++++.+ +.+. ..+..+...++.+.+++.+.+.++|+|
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~--~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDF--YANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTT--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCch--HHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 478999995 8999999999999997 89999997332 3344322 2222 123455566788888888888999999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|++.+..
T Consensus 231 INaTp~G 237 (315)
T 3tnl_A 231 TNATGVG 237 (315)
T ss_dssp EECSSTT
T ss_pred EECccCC
Confidence 9998753
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=6.2e-06 Score=67.62 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=28.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~ 36 (312)
+++|+|+|++|.+|+.+++.+.+ .++++.++.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~ 39 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER 39 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 57999999999999999998875 46888866554
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00011 Score=61.92 Aligned_cols=99 Identities=23% Similarity=0.175 Sum_probs=59.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCC---CCCChHHHHHhhhhccC-CCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPE---IGVDIEKVQMLLSFKEQ-GAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~---~~~~~~~~~~~~~l~~~-~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++|+|+||||++|+.+++.|.++. +++..+.++. +..++ -......+... +..+... .+.+ ++++++|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~-~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D 77 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL-ISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD 77 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSB-HHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCc-hHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence 5799999999999999999998854 6888875543 11111 01011112211 2333222 0222 2226899
Q ss_pred EEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 78 VVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 78 ~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+||.|.+.. ....++..+.++| ++.+-.|+
T Consensus 78 vvf~a~p~~--------~s~~~~~~~~~~g-~~vIDlSa 107 (337)
T 3dr3_A 78 VVFLATAHE--------VSHDLAPQFLEAG-CVVFDLSG 107 (337)
T ss_dssp EEEECSCHH--------HHHHHHHHHHHTT-CEEEECSS
T ss_pred EEEECCChH--------HHHHHHHHHHHCC-CEEEEcCC
Confidence 999998743 3556677777888 66555553
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.84 E-value=9e-05 Score=63.45 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=58.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEE--CCCCCCChHHHHHhhhhc-------cCCCeEEEccCCCHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLH--RPEIGVDIEKVQMLLSFK-------EQGAKLVSGSFNDYQSLV 70 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~--r~~~~~~~~~~~~~~~l~-------~~~~~~v~~D~~d~~~l~ 70 (312)
|++++|.|+||||++|..+++.|.++. .++..+. +++.+.. -......+. .....+...|.. +
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~--~~~~~~~~~~~~~p~~~~~~~v~~~~~~--~--- 89 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKK--YKDAASWKQTETLPETEQDIVVQECKPE--G--- 89 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB--HHHHCCCCCSSCCCHHHHTCBCEESSSC--T---
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCC--HHHhcccccccccccccccceEEeCchh--h---
Confidence 677899999999999999999888766 4776553 3322221 000000110 012222222211 0
Q ss_pred HHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 71 NAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
.+.++|+||.+++.. ....++..+.++| ++.+-.|+
T Consensus 90 -~~~~~Dvvf~alp~~--------~s~~~~~~~~~~G-~~VIDlSa 125 (381)
T 3hsk_A 90 -NFLECDVVFSGLDAD--------VAGDIEKSFVEAG-LAVVSNAK 125 (381)
T ss_dssp -TGGGCSEEEECCCHH--------HHHHHHHHHHHTT-CEEEECCS
T ss_pred -hcccCCEEEECCChh--------HHHHHHHHHHhCC-CEEEEcCC
Confidence 257899999998743 3556777777888 66555553
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00012 Score=58.66 Aligned_cols=94 Identities=21% Similarity=0.264 Sum_probs=54.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEE-ECCCCCCChHH-HHHhhhhccCCCeEEEccCCCHHHHHHHhc---c
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVL-HRPEIGVDIEK-VQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---L 75 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~ 75 (312)
|+|++|+|+|+ |.+|+.+++.+.++++++.+. +|+......-+ ...++.+. ++.+ ..|++.++...+.++ +
T Consensus 1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~--~~DV-vIDft~p~a~~~~~~l~~g 76 (243)
T 3qy9_A 1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK--GADV-AIDFSNPNLLFPLLDEDFH 76 (243)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT--TCSE-EEECSCHHHHHHHHTSCCC
T ss_pred CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh--CCCE-EEEeCChHHHHHHHHHhcC
Confidence 77899999998 999999999999987777764 44422100000 00001111 3343 357888877666543 6
Q ss_pred CCEEEEcCCCCccccchhHhHHHHHHHHH
Q 021470 76 VDVVICAISGVHIRSHQILLQLKLVDAIK 104 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~~~~~~~~~l~~aa~ 104 (312)
+++|+...|.. .+....+.++|+
T Consensus 77 ~~vVigTTG~s------~e~~~~l~~aa~ 99 (243)
T 3qy9_A 77 LPLVVATTGEK------EKLLNKLDELSQ 99 (243)
T ss_dssp CCEEECCCSSH------HHHHHHHHHHTT
T ss_pred CceEeCCCCCC------HHHHHHHHHHHh
Confidence 77777666542 233444555554
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=4.5e-05 Score=64.69 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=53.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHH----HHHHHhc-cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQ----SLVNAVK-LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~----~l~~~~~-~~d 77 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+.+ ++.. ..|..+.+ .+.+... ++|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI---GFDA-AFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCcE-EEecCCHHHHHHHHHHHhCCCCe
Confidence 3689999999999999999999999999999998 6666554433 3332 24665522 2333222 689
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
++|++++.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1v3u_A 217 CYFDNVGG 224 (333)
T ss_dssp EEEESSCH
T ss_pred EEEECCCh
Confidence 99999984
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.81 E-value=3.1e-05 Score=68.25 Aligned_cols=79 Identities=20% Similarity=0.314 Sum_probs=52.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc----CCCe-EE-----EccCCCHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE----QGAK-LV-----SGSFNDYQSLV 70 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~----~~~~-~v-----~~D~~d~~~l~ 70 (312)
|+ |+|.|+| .|++|..++..|.+.|++|++++|+ +++.+.+..-.. ++.+ .+ .+.+.-..++.
T Consensus 1 M~-mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~-----~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ 73 (450)
T 3gg2_A 1 MS-LDIAVVG-IGYVGLVSATCFAELGANVRCIDTD-----RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIE 73 (450)
T ss_dssp -C-CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHH
T ss_pred CC-CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECC-----HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHH
Confidence 54 7999999 7999999999999999999999998 776644332000 0000 00 00111112355
Q ss_pred HHhccCCEEEEcCCCC
Q 021470 71 NAVKLVDVVICAISGV 86 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~ 86 (312)
++++++|+||.+.+..
T Consensus 74 ea~~~aDvViiaVptp 89 (450)
T 3gg2_A 74 QAVPEADIIFIAVGTP 89 (450)
T ss_dssp HHGGGCSEEEECCCCC
T ss_pred HHHhcCCEEEEEcCCC
Confidence 5678899999998765
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.80 E-value=3.5e-05 Score=65.78 Aligned_cols=74 Identities=24% Similarity=0.232 Sum_probs=52.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh----c-cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV----K-LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~----~-~~d 77 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+.+ ++.. ..|+.+.+++.+.+ . ++|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG-----EGKEELFRSI---GGEV-FIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS-----TTHHHHHHHT---TCCE-EEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC-----HHHHHHHHHc---CCce-EEecCccHhHHHHHHHHhCCCCC
Confidence 3689999999999999999999999999999987 4455443433 4432 23665433333332 2 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||++++.
T Consensus 241 ~vi~~~g~ 248 (347)
T 2hcy_A 241 GVINVSVS 248 (347)
T ss_dssp EEEECSSC
T ss_pred EEEECCCc
Confidence 99999874
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.80 E-value=9e-05 Score=61.63 Aligned_cols=74 Identities=18% Similarity=0.211 Sum_probs=54.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+|+ |.+|+.++..|++.|. +|+++.|+ +++++.+. .+.. ... +..+.+++.+.+.++|+||
T Consensus 141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~-----~~ka~~la~~~~~-~~~----~~~~~~~~~~~~~~aDivI 209 (297)
T 2egg_A 141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRT-----VEKAERLVREGDE-RRS----AYFSLAEAETRLAEYDIII 209 (297)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSS-----HHHHHHHHHHSCS-SSC----CEECHHHHHHTGGGCSEEE
T ss_pred CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHhhh-ccC----ceeeHHHHHhhhccCCEEE
Confidence 478999995 8899999999999996 99999998 77764332 2211 110 1223456777888999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
++++...
T Consensus 210 n~t~~~~ 216 (297)
T 2egg_A 210 NTTSVGM 216 (297)
T ss_dssp ECSCTTC
T ss_pred ECCCCCC
Confidence 9998654
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00036 Score=58.02 Aligned_cols=93 Identities=20% Similarity=0.166 Sum_probs=59.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc----------cCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK----------EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~----------~~~~~~v~~D~~d~~~l~~~ 72 (312)
|++|.++| .|..|..+++.|++.||+|+++.|+ +++.+.+.... ....+++..-+.|.+.++++
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~-----~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V 76 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGL 76 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHH
Confidence 67999999 9999999999999999999999998 77774332210 01233344444444444444
Q ss_pred hccC----------CEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 73 VKLV----------DVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~----------d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
+.+. +++|.+.. ......+.+.+.+++.|
T Consensus 77 ~~~~~g~~~~~~~g~iiId~sT------~~p~~~~~~a~~~~~~G 115 (300)
T 3obb_A 77 YLDDDGLLAHIAPGTLVLECST------IAPTSARKIHAAARERG 115 (300)
T ss_dssp HHSSSSSTTSCCC-CEEEECSC------CCHHHHHHHHHHHHTTT
T ss_pred HhchhhhhhcCCCCCEEEECCC------CCHHHHHHHHHHHHHcC
Confidence 3221 22222222 22556777888887777
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.78 E-value=7.9e-05 Score=63.59 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=51.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|.|+| .|.+|..+++.|++.|++|+++.|+ +++.+. +...++.. ..+.+++.+....+|+||.+
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~-----~~~~~~---l~~~g~~~----~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLN-----VNAVQA---LEREGIAG----ARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHH---HHTTTCBC----CSSHHHHHHHSCSSCEEEEC
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHH---HHHCCCEE----eCCHHHHHhcCCCCCEEEEe
Confidence 58999999 8999999999999999999999998 766643 33334321 23444433333344999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 89 vp~~ 92 (358)
T 4e21_A 89 VPAA 92 (358)
T ss_dssp SCGG
T ss_pred CCHH
Confidence 8654
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.78 E-value=8.1e-05 Score=62.71 Aligned_cols=67 Identities=19% Similarity=0.320 Sum_probs=52.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+. +...++... .++.++++++|+||.+
T Consensus 31 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~---l~~~g~~~~-------~~~~e~~~~aDvVi~~ 94 (320)
T 4dll_A 31 ARKITFLG-TGSMGLPMARRLCEAGYALQVWNRT-----PARAAS---LAALGATIH-------EQARAAARDADIVVSM 94 (320)
T ss_dssp CSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSC-----HHHHHH---HHTTTCEEE-------SSHHHHHTTCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCC-----HHHHHH---HHHCCCEee-------CCHHHHHhcCCEEEEE
Confidence 46999999 8999999999999999999999998 777643 333354332 2345667889999998
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 95 vp~ 97 (320)
T 4dll_A 95 LEN 97 (320)
T ss_dssp CSS
T ss_pred CCC
Confidence 864
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00015 Score=61.87 Aligned_cols=91 Identities=19% Similarity=0.283 Sum_probs=56.8
Q ss_pred CcEEEEEcCCchhhHHHHHH-HHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKA-SLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++|.|.||||++|+.+++. |.++++ +++.+..++.+.. . ..+. +..+...|..+++.+ +++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~---v---~~~~--g~~i~~~~~~~~~~~----~~~Dv 68 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQA---A---PSFG--GTTGTLQDAFDLEAL----KALDI 68 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB---C---CGGG--TCCCBCEETTCHHHH----HTCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCC---c---cccC--CCceEEEecCChHHh----cCCCE
Confidence 36999999999999999995 444543 5566655422210 0 1111 122333344455543 58999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
||.+++. .....++..+.++| ++.+|.
T Consensus 69 Vf~a~g~--------~~s~~~a~~~~~~G-~k~vVI 95 (367)
T 1t4b_A 69 IVTCQGG--------DYTNEIYPKLRESG-WQGYWI 95 (367)
T ss_dssp EEECSCH--------HHHHHHHHHHHHTT-CCCEEE
T ss_pred EEECCCc--------hhHHHHHHHHHHCC-CCEEEE
Confidence 9999874 34566777778888 765554
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00016 Score=60.67 Aligned_cols=95 Identities=23% Similarity=0.277 Sum_probs=65.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHH-Hhhhhc------cCCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQ-MLLSFK------EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~l~~~ 72 (312)
|.+++|.|+|| |.+|..++..|+..|+ +|++++++. ++.+ ....+. .....+... .|. ++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~-----~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~----~a 72 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAE-----GTPQGKGLDIAESSPVDGFDAKFTGA--NDY----AA 72 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHHHHHHHTCCCCEEEE--SSG----GG
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCc-----hhHHHHHHHHhchhhhcCCCCEEEEe--CCH----HH
Confidence 66789999996 9999999999999998 999999873 3331 011111 123333321 122 46
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++++|+||.+++..... ..|....+.+++.+.+..
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~ 115 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA 115 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC
Confidence 88999999999865422 146777888888888876
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00027 Score=59.30 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=66.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHH-Hhhhhcc------CCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQ-MLLSFKE------QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~l~~------~~~~~v~~D~~d~~~l~~~ 72 (312)
|.+++|.|+| +|.+|..++..|+..|. +|+.++++. ++.+ ....+.+ ....+... .|. ++
T Consensus 3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~-----~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a 70 (321)
T 3p7m_A 3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQ-----GMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KD 70 (321)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GG
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCCh-----HHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HH
Confidence 6678999999 59999999999999887 999998873 3331 1122221 23343321 122 46
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++++|+||.+++..... ..|....+.+++.+.+..
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~ 113 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC 113 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC
Confidence 88999999999875432 146777888888888876
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.76 E-value=3.5e-05 Score=64.65 Aligned_cols=67 Identities=25% Similarity=0.361 Sum_probs=50.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+. +...++.. .. ++.++++++|+||.+
T Consensus 21 m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~---l~~~g~~~----~~---~~~~~~~~aDvvi~~ 84 (310)
T 3doj_A 21 MMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRT-----LSKCDE---LVEHGASV----CE---SPAEVIKKCKYTIAM 84 (310)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHH---HHHTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHH---HHHCCCeE----cC---CHHHHHHhCCEEEEE
Confidence 68999999 8999999999999999999999998 544432 22334432 12 344556779999988
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 85 vp~ 87 (310)
T 3doj_A 85 LSD 87 (310)
T ss_dssp CSS
T ss_pred cCC
Confidence 865
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.75 E-value=2.4e-05 Score=62.13 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=48.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEE-EECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYV-LHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+||+|.|+| +|.+|..+++.|.+.|++|++ .+|+ +++.+.+.. ..++.... .+.+ .++++|+|
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~-----~~~~~~l~~--~~g~~~~~---~~~~----~~~~aDvV 85 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRG-----PASLSSVTD--RFGASVKA---VELK----DALQADVV 85 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTC-----GGGGHHHHH--HHTTTEEE---CCHH----HHTTSSEE
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCC-----HHHHHHHHH--HhCCCccc---ChHH----HHhcCCEE
Confidence 5578999999 999999999999999999999 7777 444322111 11332221 2222 35789999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
|.+...
T Consensus 86 ilavp~ 91 (220)
T 4huj_A 86 ILAVPY 91 (220)
T ss_dssp EEESCG
T ss_pred EEeCCh
Confidence 998864
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00027 Score=59.31 Aligned_cols=92 Identities=21% Similarity=0.344 Sum_probs=61.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhcc-----CCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKE-----QGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~l~~~~~ 74 (312)
+++|.|+|+ |.+|+.++..|+..|. ++.+++++ +++.+- ...+.+ .++.+...| . ++++
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~-----~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~ 75 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF-----KDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAK 75 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCC-----hHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhc
Confidence 579999995 9999999999999885 89999887 555531 112211 234444332 2 3588
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+||.+++..... ..|....+.+++++.++.
T Consensus 76 ~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 116 (326)
T 3vku_A 76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG 116 (326)
T ss_dssp TCSEEEECCCCC----------------CHHHHHHHHHTTT
T ss_pred CCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999865421 257777889999988876
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.74 E-value=7.1e-05 Score=61.73 Aligned_cols=70 Identities=24% Similarity=0.387 Sum_probs=51.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++|+|.|+| .|.+|..+++.|++.|+ +|++++|+ +++.+.+.. ..++... .+ ..++++++|
T Consensus 1 M~~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~-----~~~~~~l~~--~~gi~~~----~~---~~~~~~~aD 65 (280)
T 3tri_A 1 MNTSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRS-----LDKLDFFKE--KCGVHTT----QD---NRQGALNAD 65 (280)
T ss_dssp -CCSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSS-----SHHHHHHHH--TTCCEEE----SC---HHHHHSSCS
T ss_pred CCCCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCC-----HHHHHHHHH--HcCCEEe----CC---hHHHHhcCC
Confidence 7778999999 69999999999999998 99999998 556533221 1244431 12 345678999
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||.+..+
T Consensus 66 vVilav~p 73 (280)
T 3tri_A 66 VVVLAVKP 73 (280)
T ss_dssp EEEECSCG
T ss_pred eEEEEeCH
Confidence 99999854
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0003 Score=59.04 Aligned_cols=93 Identities=16% Similarity=0.284 Sum_probs=63.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHH-hhhhcc------CCCeEEEccCCCHHHHHHH
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQM-LLSFKE------QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~l~~~ 72 (312)
+++||.|+|| |.+|..++..|+..| .+|..++++ +++.+. ...+.+ ..+.+.. .+ .++
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~~v~~---~~----~~a 71 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLD-----TEKVRGDVMDLKHATPYSPTTVRVKA---GE----YSD 71 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSC-----HHHHHHHHHHHHHHGGGSSSCCEEEE---CC----GGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCC-----hhHhhhhhhhHHhhhhhcCCCeEEEe---CC----HHH
Confidence 3569999997 999999999999888 489888877 544431 112211 2333332 22 345
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++++|+|+.+++..... ..|....+.+++.+.+..
T Consensus 72 ~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 114 (317)
T 3d0o_A 72 CHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK 114 (317)
T ss_dssp GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999999876432 245666777888887775
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00018 Score=61.56 Aligned_cols=76 Identities=24% Similarity=0.418 Sum_probs=58.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|+ |.+|+.+++.|...|.+|++++|+ +++.+.+..+....+..+ ..+.+++.+.+.++|+||++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~-----~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEEC
Confidence 368999997 999999999999999999999998 777765544422223222 23566777788899999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 238 ~~~~~ 242 (361)
T 1pjc_A 238 VLVPG 242 (361)
T ss_dssp CCCTT
T ss_pred CCcCC
Confidence 97643
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.72 E-value=4e-05 Score=65.68 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=51.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE------ccCC-CHHHHHHHh
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS------GSFN-DYQSLVNAV 73 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~------~D~~-d~~~l~~~~ 73 (312)
|++|+|+|+| .|.+|..++..|.+.|++|++++|+ +++.+.+... .++.+.. ..+. ..+++.+++
T Consensus 2 m~~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 2 IESKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDR--GAIIAEGPGLAGTAHPDLLTSDIGLAV 73 (359)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHH--TSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred CCcCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHhc--CCeEEeccccccccccceecCCHHHHH
Confidence 3467999999 6999999999999999999999998 6665433221 1211110 0010 112344566
Q ss_pred ccCCEEEEcCCCCc
Q 021470 74 KLVDVVICAISGVH 87 (312)
Q Consensus 74 ~~~d~v~~~~~~~~ 87 (312)
+++|+||.+.....
T Consensus 74 ~~~D~vi~~v~~~~ 87 (359)
T 1bg6_A 74 KDADVILIVVPAIH 87 (359)
T ss_dssp TTCSEEEECSCGGG
T ss_pred hcCCEEEEeCCchH
Confidence 78999999987653
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00015 Score=61.63 Aligned_cols=94 Identities=26% Similarity=0.293 Sum_probs=56.9
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEE--CCCCCCChHHHHHhhhh-------ccCCCeEEEccCCCHHHH
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALG-HETYVLH--RPEIGVDIEKVQMLLSF-------KEQGAKLVSGSFNDYQSL 69 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~--r~~~~~~~~~~~~~~~l-------~~~~~~~v~~D~~d~~~l 69 (312)
|+ |++|+|.||+|++|+.+++.|.++. .+++++. ++.... . -......+ ....+.+ .|+ |++.
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~- 74 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGK-K-YKDAVKWIEQGDIPEEVQDLPI--VST-NYED- 74 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTS-B-HHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG-
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCC-C-HHHhcCcccccccccCCceeEE--eeC-CHHH-
Confidence 53 6899999999999999999998765 5888886 221111 0 00000000 0011222 233 3333
Q ss_pred HHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 70 VNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.++|+||.+++.. ....++..+.++| ++ +|
T Consensus 75 ---~~~vDvVf~atp~~--------~s~~~a~~~~~aG-~~-VI 105 (350)
T 2ep5_A 75 ---HKDVDVVLSALPNE--------LAESIELELVKNG-KI-VV 105 (350)
T ss_dssp ---GTTCSEEEECCCHH--------HHHHHHHHHHHTT-CE-EE
T ss_pred ---hcCCCEEEECCChH--------HHHHHHHHHHHCC-CE-EE
Confidence 36899999887643 3567788888888 65 44
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=6e-05 Score=63.73 Aligned_cols=73 Identities=21% Similarity=0.161 Sum_probs=54.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.+..+ +... ..|..+. +.+.+... ++|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQ-VINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEECCCccHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 6676555444 3332 2355443 33444332 699
Q ss_pred EEEEcCC
Q 021470 78 VVICAIS 84 (312)
Q Consensus 78 ~v~~~~~ 84 (312)
++|++++
T Consensus 212 ~vi~~~g 218 (327)
T 1qor_A 212 VVYDSVG 218 (327)
T ss_dssp EEEECSC
T ss_pred EEEECCc
Confidence 9999998
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=9.2e-05 Score=63.25 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=54.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+.+ ++.. ..|..+. +.+.+... ++|
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~-~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAHE-VFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSE-EEETTSTTHHHHHHHHHCTTCEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHc---CCCE-EEeCCCchHHHHHHHHcCCCCcE
Confidence 3689999999999999999999999999999998 7776554443 3332 2355543 33444433 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||++++.
T Consensus 242 ~vi~~~G~ 249 (351)
T 1yb5_A 242 IIIEMLAN 249 (351)
T ss_dssp EEEESCHH
T ss_pred EEEECCCh
Confidence 99999874
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.71 E-value=6.8e-05 Score=62.58 Aligned_cols=69 Identities=23% Similarity=0.326 Sum_probs=50.3
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+ +|+|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+. +...++.. ..+ +.++++++|+|
T Consensus 1 M~~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~~~---~~~~g~~~----~~~---~~~~~~~~D~v 64 (301)
T 3cky_A 1 MEKSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLM-----EANVAA---VVAQGAQA----CEN---NQKVAAASDII 64 (301)
T ss_dssp ---CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSS-----HHHHHH---HHTTTCEE----CSS---HHHHHHHCSEE
T ss_pred CCCCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHH---HHHCCCee----cCC---HHHHHhCCCEE
Confidence 54 57999999 8999999999999999999999888 666533 32334432 223 34456679999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
|.+.+.
T Consensus 65 i~~vp~ 70 (301)
T 3cky_A 65 FTSLPN 70 (301)
T ss_dssp EECCSS
T ss_pred EEECCC
Confidence 998864
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00011 Score=64.95 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=54.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|.||+|.|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+......+..+.. ..+.+++.+.++++|+|+
T Consensus 2 ~~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 2 NAQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp -CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEE
T ss_pred CCCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEE
Confidence 5678999999 8999999999999999999999998 6666433322111222211 235555555556799999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 74 l~Vp~~ 79 (484)
T 4gwg_A 74 LLVKAG 79 (484)
T ss_dssp ECSCSS
T ss_pred EecCCh
Confidence 888764
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.70 E-value=7e-05 Score=63.47 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=54.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ +... ..|..+. +.+.+... ++|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---g~~~-~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST-----EEKAETARKL---GCHH-TINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCE-EEECCCHHHHHHHHHHhCCCCCe
Confidence 3689999999999999999999999999999998 6666555444 3332 2355443 34444432 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
++|++++.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1wly_A 217 VVYDSIGK 224 (333)
T ss_dssp EEEECSCT
T ss_pred EEEECCcH
Confidence 99999985
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=60.40 Aligned_cols=73 Identities=22% Similarity=0.325 Sum_probs=50.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++++|+|+ |.+|+.++..|++.|.+|+++.|+ +++.+.+ +.+...+ .+...|+ +++.+ .++|+||+
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~-----~~~~~~la~~~~~~~-~~~~~~~---~~~~~--~~~DivVn 186 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTG-SIQALSM---DELEG--HEFDLIIN 186 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGS-SEEECCS---GGGTT--CCCSEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHhhccC-CeeEecH---HHhcc--CCCCEEEE
Confidence 478999997 789999999999999999999998 6666433 2232211 1222332 23222 58999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+++...
T Consensus 187 ~t~~~~ 192 (271)
T 1nyt_A 187 ATSSGI 192 (271)
T ss_dssp CCSCGG
T ss_pred CCCCCC
Confidence 998654
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=8.4e-05 Score=63.26 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=57.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhh-----hc--cCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLS-----FK--EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-----l~--~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
+++|.|+||||++|..+++.|.++. .++..++.+.+...+-.. ...+ +. ..+..+... +++. +.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~-~~p~~~~~~~~~~~~~~~v~~~---~~~~----~~ 78 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGE-VVRWQTVGQVPKEIADMEIKPT---DPKL----MD 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHH-HCCCCSSSCCCHHHHTCBCEEC---CGGG----CT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhH-hcccccccccccccccceEEeC---CHHH----hc
Confidence 3689999999999999999887765 477776543222111100 0000 00 001222221 2222 46
Q ss_pred cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 75 LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
++|+||.|++... .+.++..+.++| ++.+-.|+
T Consensus 79 ~vDvvf~a~p~~~--------s~~~a~~~~~~G-~~vIDlSa 111 (359)
T 4dpl_A 79 DVDIIFSPLPQGA--------AGPVEEQFAKEG-FPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTT--------HHHHHHHHHHTT-CEEEECSS
T ss_pred CCCEEEECCChHH--------HHHHHHHHHHCC-CEEEEcCC
Confidence 8999999988653 346666667788 66666654
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=8.4e-05 Score=63.26 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=57.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhh-----hc--cCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLS-----FK--EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-----l~--~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
+++|.|+||||++|..+++.|.++. .++..++.+.+...+-.. ...+ +. ..+..+... +++. +.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~-~~p~~~~~~~~~~~~~~~v~~~---~~~~----~~ 78 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGE-VVRWQTVGQVPKEIADMEIKPT---DPKL----MD 78 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHH-HCCCCSSSCCCHHHHTCBCEEC---CGGG----CT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhH-hcccccccccccccccceEEeC---CHHH----hc
Confidence 3689999999999999999887765 477776543222111100 0000 00 001222221 2222 46
Q ss_pred cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 75 LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
++|+||.|++... .+.++..+.++| ++.+-.|+
T Consensus 79 ~vDvvf~a~p~~~--------s~~~a~~~~~~G-~~vIDlSa 111 (359)
T 4dpk_A 79 DVDIIFSPLPQGA--------AGPVEEQFAKEG-FPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTT--------HHHHHHHHHHTT-CEEEECSS
T ss_pred CCCEEEECCChHH--------HHHHHHHHHHCC-CEEEEcCC
Confidence 8999999988653 346666667778 66666653
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=7e-05 Score=62.41 Aligned_cols=66 Identities=27% Similarity=0.316 Sum_probs=49.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|+|+| .|.+|..++..|.+.|++|++++|+ +++.+.+ ...++.. ..+ +.++++++|+||.+.
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~-----~~~~~~~---~~~g~~~----~~~---~~~~~~~~D~vi~~v 69 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN-----PEAIADV---IAAGAET----AST---AKAIAEQCDVIITML 69 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHH---HHTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHH---HHCCCee----cCC---HHHHHhCCCEEEEEC
Confidence 6999999 8999999999999999999999998 6665432 2334432 223 344566899999998
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
+.
T Consensus 70 ~~ 71 (299)
T 1vpd_A 70 PN 71 (299)
T ss_dssp SS
T ss_pred CC
Confidence 74
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=61.42 Aligned_cols=75 Identities=25% Similarity=0.270 Sum_probs=56.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|+ |.+|..+++.+...|.+|++++|+ +++.+.++..-...+ ..+..+.+++.+.++++|+||.+
T Consensus 168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~-----~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDIN-----IDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEEC
Confidence 478999996 999999999999999999999998 666644433212222 23344667788888899999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
++..
T Consensus 239 ~~~p 242 (377)
T 2vhw_A 239 VLVP 242 (377)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 8654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00083 Score=59.38 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=73.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++|+|.| .|.+|..+++.| +++++|.++-++ ++++..+... -++..++.||.+|++-|.++ +..+|+++-+
T Consensus 236 ~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d-----~~r~~~la~~-l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~ 307 (461)
T 4g65_A 236 RRIMIVG-GGNIGASLAKRL-EQTYSVKLIERN-----LQRAEKLSEE-LENTIVFCGDAADQELLTEENIDQVDVFIAL 307 (461)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESC-----HHHHHHHHHH-CTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred cEEEEEc-chHHHHHHHHHh-hhcCceEEEecC-----HHHHHHHHHH-CCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence 5799999 899999999987 556999999998 8888655433 25788999999999999886 6789999988
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+... ...-..-.|++.| +++.+.
T Consensus 308 T~~De-------~Ni~~~llAk~~g-v~kvIa 331 (461)
T 4g65_A 308 TNEDE-------TNIMSAMLAKRMG-AKKVMV 331 (461)
T ss_dssp CSCHH-------HHHHHHHHHHHTT-CSEEEE
T ss_pred ccCcH-------HHHHHHHHHHHcC-Cccccc
Confidence 76532 1222334467788 888775
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.66 E-value=6.2e-05 Score=62.97 Aligned_cols=68 Identities=24% Similarity=0.332 Sum_probs=51.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+++|.|+| .|.+|..+++.|++.|++|+++.|+ +++.+.+.. .++.. .. ++.++++++|+||.+
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~-----~~~~~~~~~---~g~~~----~~---~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRS-----PGKAAALVA---AGAHL----CE---SVKAALSASPATIFV 72 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHH---HTCEE----CS---SHHHHHHHSSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---CCCee----cC---CHHHHHhcCCEEEEE
Confidence 46899999 8999999999999999999999998 766643332 24422 12 345566789999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 73 vp~~ 76 (306)
T 3l6d_A 73 LLDN 76 (306)
T ss_dssp CSSH
T ss_pred eCCH
Confidence 8754
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=4.7e-05 Score=63.00 Aligned_cols=79 Identities=25% Similarity=0.282 Sum_probs=51.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh---------ccC-CCeEEE-----ccCCCH
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF---------KEQ-GAKLVS-----GSFNDY 66 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l---------~~~-~~~~v~-----~D~~d~ 66 (312)
++++|.|+| .|.+|..++..|.+.|++|++++|+ +++.+..... ... ++.... ..+.-.
T Consensus 3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~-----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~ 76 (283)
T 4e12_A 3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDIN-----TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS 76 (283)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe
Confidence 368999999 7999999999999999999999998 5554322211 000 100000 000001
Q ss_pred HHHHHHhccCCEEEEcCCCC
Q 021470 67 QSLVNAVKLVDVVICAISGV 86 (312)
Q Consensus 67 ~~l~~~~~~~d~v~~~~~~~ 86 (312)
.++.++++++|+||.+....
T Consensus 77 ~~~~~~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPES 96 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSC
T ss_pred CCHHHHhccCCEEEEeccCc
Confidence 23556678999999998754
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00016 Score=60.43 Aligned_cols=68 Identities=22% Similarity=0.251 Sum_probs=49.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|.|+| .|.+|..++..|.+.|++|++++|+ +++.+.+. ..++.....|+ .++++++|+||.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~~~~~~------~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLN-----PQACANLL---AEGACGAAASA------REFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HTTCSEEESSS------TTTTTTCSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHH---HcCCccccCCH------HHHHhcCCEEEEE
Confidence 47899999 8999999999999999999999998 76664332 33443322222 2345678888877
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 72 vp~ 74 (303)
T 3g0o_A 72 VVN 74 (303)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0001 Score=63.00 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=54.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ ++.. ..|..+. +.+.+... ++|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGS-----QKKLQMAEKL---GAAA-GFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH---TCSE-EEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHc---CCcE-EEecCChHHHHHHHHHhcCCCce
Confidence 3689999999999999999999999999999998 7776555444 3332 2355443 34444433 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
++|++++.
T Consensus 234 ~vi~~~G~ 241 (354)
T 2j8z_A 234 LILDCIGG 241 (354)
T ss_dssp EEEESSCG
T ss_pred EEEECCCc
Confidence 99999985
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=5.9e-05 Score=64.27 Aligned_cols=74 Identities=18% Similarity=0.247 Sum_probs=53.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCH----HHHHHHh-ccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDY----QSLVNAV-KLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~----~~l~~~~-~~~ 76 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.+. .+ ++..+ .|..+. +.+.+.. .++
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~-----~~~~~~~~~~~---g~~~~-~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS-----KEKVDLLKTKF---GFDDA-FNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTS---CCSEE-EETTSCSCSHHHHHHHCTTCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc---CCceE-EecCCHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999999999998 66665443 33 43322 355442 3333332 269
Q ss_pred CEEEEcCCC
Q 021470 77 DVVICAISG 85 (312)
Q Consensus 77 d~v~~~~~~ 85 (312)
|+||++++.
T Consensus 227 d~vi~~~g~ 235 (345)
T 2j3h_A 227 DIYFENVGG 235 (345)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCH
Confidence 999999874
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.63 E-value=3.9e-05 Score=63.64 Aligned_cols=68 Identities=19% Similarity=0.278 Sum_probs=49.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|++|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+.+. ..++.. .. +..++++++|+||.+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~----~~---~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRN-----PAKCAPLV---ALGARQ----AS---SPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSS-----GGGGHHHH---HHTCEE----CS---CHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHH---HCCCee----cC---CHHHHHHcCCEEEEE
Confidence 46899999 9999999999999999999999998 54443222 224332 12 344556789999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 65 v~~~ 68 (287)
T 3pdu_A 65 LADP 68 (287)
T ss_dssp CSSH
T ss_pred cCCH
Confidence 8753
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00028 Score=57.02 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=67.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCC--------------ChHHHHHh-hhhc--cCCCe--EEEccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGV--------------DIEKVQML-LSFK--EQGAK--LVSGSF 63 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~-~~l~--~~~~~--~v~~D~ 63 (312)
++|+|+| .|.+|+.+++.|...|. ++++++++.-+. ...|.+.+ +.+. .+.++ .+..++
T Consensus 32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 6899999 68999999999999995 899888874110 00344322 2222 23443 444445
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
. .+.+.+.++++|+||.+... ...-..+.++|++.+ ++.+..+
T Consensus 111 ~-~~~~~~~~~~~DvVi~~~d~-------~~~~~~l~~~~~~~~-~p~i~~~ 153 (249)
T 1jw9_B 111 D-DAELAALIAEHDLVLDCTDN-------VAVRNQLNAGCFAAK-VPLVSGA 153 (249)
T ss_dssp C-HHHHHHHHHTSSEEEECCSS-------HHHHHHHHHHHHHHT-CCEEEEE
T ss_pred C-HhHHHHHHhCCCEEEEeCCC-------HHHHHHHHHHHHHcC-CCEEEee
Confidence 4 46677788899999998753 334456777888888 5544433
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00033 Score=58.46 Aligned_cols=96 Identities=15% Similarity=0.105 Sum_probs=63.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-C--CeEEEEECCCCCCChHHHHHhhhhccCCC--eEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-G--HETYVLHRPEIGVDIEKVQMLLSFKEQGA--KLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~--~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|||.|+||+|++|+.++..|..+ + .+++.+++.. .. +.+. .++.+... .+... .. +...+.++++|+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~-~G~a---~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDi 72 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VT-PGVA---VDLSHIPTAVKIKGF-SG--EDATPALEGADV 72 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-TH-HHHH---HHHHTSCSSEEEEEE-CS--SCCHHHHTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cc-hhHH---HHhhCCCCCceEEEe-cC--CCcHHHhCCCCE
Confidence 58999999999999999988875 5 5888888864 11 1122 22322221 22211 11 112345789999
Q ss_pred EEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
|+.+++..... ..|....+.+++++.+..
T Consensus 73 vii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~ 109 (312)
T 3hhp_A 73 VLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC 109 (312)
T ss_dssp EEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999876422 257777888889888876
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.8e-05 Score=63.36 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=49.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+++|.|+| .|.+|..+++.|.+.|++|++++|+.. +. +.+...++.. . +++.++++ +|+||.+
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~-----~~---~~~~~~g~~~----~---~~~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIE-----AM---TPLAEAGATL----A---DSVADVAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTT-----TS---HHHHHTTCEE----C---SSHHHHTT-SSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHH-----HH---HHHHHCCCEE----c---CCHHHHHh-CCEEEEE
Confidence 46899999 899999999999999999999999843 32 2222334432 1 23456677 9999998
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.+.
T Consensus 78 vp~ 80 (296)
T 3qha_A 78 VLD 80 (296)
T ss_dssp CSS
T ss_pred CCC
Confidence 875
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00022 Score=62.36 Aligned_cols=92 Identities=17% Similarity=0.302 Sum_probs=63.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-C---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC--CCH-HHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-H---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF--NDY-QSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~--~d~-~~l~~~~~~ 75 (312)
+++|+|+| .|.||+.+++.|.++. . +|++.+....... ..+. .++.++..++ .|. +.+.+++++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-----~~~~---~g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-----VAQQ---YGVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-----HHHH---HTCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-----HHhh---cCCceeEEeccchhHHHHHHHHhcC
Confidence 36899999 9999999999999875 4 7888876533221 1111 2455555555 454 345567777
Q ss_pred CCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 76 VDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.|+|++++... ....++++|.++| + +++
T Consensus 84 ~DvVIN~s~~~--------~~l~Im~acleaG-v-~Yl 111 (480)
T 2ph5_A 84 NDFLIDVSIGI--------SSLALIILCNQKG-A-LYI 111 (480)
T ss_dssp TCEEEECCSSS--------CHHHHHHHHHHHT-C-EEE
T ss_pred CCEEEECCccc--------cCHHHHHHHHHcC-C-CEE
Confidence 79999966443 3678999999999 4 554
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00012 Score=61.30 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=50.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHHHH-HhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSLVN-AVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l~~-~~~~~d~ 78 (312)
+++|.|+| .|.+|..+++.|.+.|+ +|++++|+ +++.+... ..++. .... + +.+ +++++|+
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~-----~~~~~~a~---~~G~~~~~~~---~---~~~~~~~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAV---DLGIIDEGTT---S---IAKVEDFSPDF 97 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHH---HTTSCSEEES---C---TTGGGGGCCSE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECC-----HHHHHHHH---HCCCcchhcC---C---HHHHhhccCCE
Confidence 47999999 89999999999999998 99999998 66654333 22331 1111 2 234 5778999
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
||.+....
T Consensus 98 Vilavp~~ 105 (314)
T 3ggo_A 98 VMLSSPVR 105 (314)
T ss_dssp EEECSCGG
T ss_pred EEEeCCHH
Confidence 99998754
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0014 Score=54.73 Aligned_cols=66 Identities=20% Similarity=0.247 Sum_probs=51.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|++|++++|+.... .++.... ..+++.++++.+|+|+.+
T Consensus 139 g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 139 EFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSW-------------PGVESYV----GREELRAFLNQTRVLINL 200 (315)
T ss_dssp TCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhh-------------hhhhhhc----ccCCHHHHHhhCCEEEEe
Confidence 47899999 99999999999999999999999974321 2232221 236788889999999988
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 201 ~Plt 204 (315)
T 3pp8_A 201 LPNT 204 (315)
T ss_dssp CCCC
T ss_pred cCCc
Confidence 7754
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.59 E-value=9e-05 Score=61.39 Aligned_cols=66 Identities=21% Similarity=0.305 Sum_probs=49.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+. +...++.. . +++.++++++|+||.+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~-----~~~~~~---~~~~g~~~----~---~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRS-----PEKAEE---LAALGAER----A---ATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----GGGGHH---HHHTTCEE----C---SSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHH---HHHCCCee----c---CCHHHHHhcCCEEEEEc
Confidence 6899999 8999999999999999999999998 444422 22334432 1 23455667899999888
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
+.
T Consensus 66 p~ 67 (287)
T 3pef_A 66 AD 67 (287)
T ss_dssp SS
T ss_pred CC
Confidence 64
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=62.04 Aligned_cols=74 Identities=20% Similarity=0.239 Sum_probs=53.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCH---HHHHHHh-ccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDY---QSLVNAV-KLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~---~~l~~~~-~~~d 77 (312)
.++|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.+ +.+ ++..+ .|..+. +.+.+.. .++|
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG-----AEKCRFLVEEL---GFDGA-IDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHTT---CCSEE-EETTTSCHHHHHHHHCTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHHc---CCCEE-EECCCHHHHHHHHHhcCCCce
Confidence 3689999999999999999999999999999998 7777554 333 44322 344443 2333332 2699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||++++.
T Consensus 221 ~vi~~~g~ 228 (336)
T 4b7c_A 221 VFFDNVGG 228 (336)
T ss_dssp EEEESSCH
T ss_pred EEEECCCc
Confidence 99999884
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00014 Score=62.20 Aligned_cols=74 Identities=22% Similarity=0.247 Sum_probs=53.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc-cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK-LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~-~~d~ 78 (312)
.+|+|+||+|.+|..+++.+...|. +|++++|+ +++.+.+.. ..++.. ..|..+. +.+.+... ++|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~-----~~~~~~~~~--~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGT-----HEKCILLTS--ELGFDA-AINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHH--TSCCSE-EEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCC-----HHHHHHHHH--HcCCce-EEecCchHHHHHHHHhcCCCCCE
Confidence 7899999999999999999999998 99999998 666644432 123332 2455543 23333322 6999
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
+|++++.
T Consensus 234 vi~~~G~ 240 (357)
T 2zb4_A 234 YFDNVGG 240 (357)
T ss_dssp EEESCCH
T ss_pred EEECCCH
Confidence 9999983
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.57 E-value=3.9e-05 Score=63.23 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=54.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHh-hhhcc--CCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQML-LSFKE--QGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~~--~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+ +++++.+ +.+.. .++.+...++. ++.+.+.++|+
T Consensus 127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~~l~~~Di 197 (283)
T 3jyo_A 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLD-----TSRAQALADVINNAVGREAVVGVDAR---GIEDVIAAADG 197 (283)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSS-----HHHHHHHHHHHHHHHTSCCEEEECST---THHHHHHHSSE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEcCHH---HHHHHHhcCCE
Confidence 478999996 8999999999999996 79999998 7776533 33321 23444444443 35566778999
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
||++.+..
T Consensus 198 VInaTp~G 205 (283)
T 3jyo_A 198 VVNATPMG 205 (283)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998753
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00044 Score=58.92 Aligned_cols=90 Identities=24% Similarity=0.324 Sum_probs=55.1
Q ss_pred cEEEEEcCCchhhHHHHH-HHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVK-ASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++|.|+||||++|+.+++ .|.++. .++..++.++.+.. . ..+...... ..+..+++. ++++|+|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~---~---~~~~~~~~~--~~~~~~~~~----~~~~Dvv 68 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP---A---PNFGKDAGM--LHDAFDIES----LKQLDAV 68 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB---C---CCSSSCCCB--CEETTCHHH----HTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcC---H---HHhCCCceE--EEecCChhH----hccCCEE
Confidence 589999999999999999 666666 36666654322210 0 112111111 223334443 5789999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
|.|++.. ..+.++..+.++| ++.+|.
T Consensus 69 f~a~~~~--------~s~~~~~~~~~~G-~k~~VI 94 (370)
T 3pzr_A 69 ITCQGGS--------YTEKVYPALRQAG-WKGYWI 94 (370)
T ss_dssp EECSCHH--------HHHHHHHHHHHTT-CCCEEE
T ss_pred EECCChH--------HHHHHHHHHHHCC-CCEEEE
Confidence 9998753 3456666677778 754443
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00018 Score=64.09 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=50.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc------------CCCHH
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS------------FNDYQ 67 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D------------~~d~~ 67 (312)
+||+|.|+| .|++|..++..|.+. |++|++++|+ +++.+.+. .....+..-+ +.-..
T Consensus 8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~-----~~~v~~l~---~g~~~i~e~gl~~~~~~~~~~~l~~t~ 78 (481)
T 2o3j_A 8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMN-----TAKIAEWN---SDKLPIYEPGLDEIVFAARGRNLFFSS 78 (481)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSC-----HHHHHHHT---SSSCSSCCTTHHHHHHHHBTTTEEEES
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECC-----HHHHHHHH---CCCCCcCCCCHHHHHHHhhcCCEEEEC
Confidence 457999999 899999999999998 7999999998 77764432 2111110000 00001
Q ss_pred HHHHHhccCCEEEEcCCCC
Q 021470 68 SLVNAVKLVDVVICAISGV 86 (312)
Q Consensus 68 ~l~~~~~~~d~v~~~~~~~ 86 (312)
++.++++++|+||.+.+..
T Consensus 79 ~~~~~~~~aDvvii~Vptp 97 (481)
T 2o3j_A 79 DIPKAIAEADLIFISVNTP 97 (481)
T ss_dssp CHHHHHHHCSEEEECCCCC
T ss_pred CHHHHhhcCCEEEEecCCc
Confidence 2334566899999997654
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=64.65 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=50.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEE-------------EccCCCHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-------------SGSFNDYQSLV 70 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-------------~~D~~d~~~l~ 70 (312)
|+|.|+| +|++|..++..|.+.|++|++++|+ +++.+.+.. .+..+. .+.+.-..++.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~-----~~~~~~l~~---~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~ 71 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKIDLINQ---GKSPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHT---TCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHhC---CCCCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence 4899999 8999999999999999999999998 766643322 111100 00011111244
Q ss_pred HHhccCCEEEEcCCCCc
Q 021470 71 NAVKLVDVVICAISGVH 87 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~ 87 (312)
++++++|+||.+.+...
T Consensus 72 ~~~~~aDvviiaVptp~ 88 (436)
T 1mv8_A 72 KAVLDSDVSFICVGTPS 88 (436)
T ss_dssp HHHHTCSEEEECCCCCB
T ss_pred HHhccCCEEEEEcCCCc
Confidence 55678999999987544
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00053 Score=60.56 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=60.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEc-------cCCCHHHHHHHh
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG-------SFNDYQSLVNAV 73 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~-------D~~d~~~l~~~~ 73 (312)
|||++|||+| .|.+|..+++.+.+.|++++++........+.. .+ . -+.+.. ++.|.+.+.++.
T Consensus 4 m~~~kiLI~g-~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~-----~~--a-d~~~~i~~~~~~~~~~d~~~l~~~~ 74 (446)
T 3ouz_A 4 MEIKSILIAN-RGEIALRALRTIKEMGKKAICVYSEADKDALYL-----KY--A-DASICIGKARSSESYLNIPAIIAAA 74 (446)
T ss_dssp TCCCEEEECC-CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHH-----HH--S-SEEEEEECCTTTTGGGCHHHHHHHH
T ss_pred cccceEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCcccccchH-----hh--C-CEEEEcCCCCccccccCHHHHHHHH
Confidence 7789999999 788999999999999999999865422111111 01 1 122322 667888888877
Q ss_pred c--cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 74 K--LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 74 ~--~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
+ ++|+|+-..+.... ...+++++.+.| ++
T Consensus 75 ~~~~~d~i~p~~g~~~e-------~~~~~~~~~~~g-~~ 105 (446)
T 3ouz_A 75 EIAEADAIFPGYGFLSE-------NQNFVEICAKHN-IK 105 (446)
T ss_dssp HHHTCSEEECCSSTTTT-------CHHHHHHHHHTT-CE
T ss_pred HHhCcCEEEECCccccc-------CHHHHHHHHHCC-Cc
Confidence 5 79988765443221 123566677777 54
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00052 Score=57.34 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=61.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHH-hhhhcc------CCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQM-LLSFKE------QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~l~~------~~~~~v~~D~~d~~~l~~~ 72 (312)
|+ +||.|+|| |.+|..++..|+..|+ +|++++++. ++.+. ...+.. ....+... .| + ++
T Consensus 1 M~-~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~-----~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a 67 (309)
T 1ur5_A 1 MR-KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE-----GVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-AD 67 (309)
T ss_dssp -C-CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSS-----SHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GG
T ss_pred CC-CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCc-----cHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HH
Confidence 54 79999997 9999999999999996 888887763 22221 112211 12222221 22 2 35
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceee
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
++++|+||.+++..... ..|....+.+.+.+.+.. ...++
T Consensus 68 ~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~v 115 (309)
T 1ur5_A 68 TANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVI 115 (309)
T ss_dssp GTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEE
T ss_pred HCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEE
Confidence 88999999999865421 144566677888887775 44433
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00016 Score=60.29 Aligned_cols=56 Identities=27% Similarity=0.336 Sum_probs=44.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+++|.|+||.|.+|..++..|.+.|++|+++.|+.. .+..++++++|+||.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~----------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW----------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG----------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc----------------------------cCHHHHhcCCCEEEEe
Confidence 368999999999999999999999999999988621 0234556778888887
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
....
T Consensus 73 vp~~ 76 (298)
T 2pv7_A 73 VPIN 76 (298)
T ss_dssp SCGG
T ss_pred CCHH
Confidence 7643
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00011 Score=61.61 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=50.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
||+|.|+| .|.+|..+++.|.+.|+ +|++++|+.+ +++.+ .+...++.. ..+ ..++++++|+||.
T Consensus 24 ~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~---~~~~~---~~~~~g~~~----~~~---~~e~~~~aDvVi~ 89 (312)
T 3qsg_A 24 AMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASA---ESWRP---RAEELGVSC----KAS---VAEVAGECDVIFS 89 (312)
T ss_dssp -CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCH---HHHHH---HHHHTTCEE----CSC---HHHHHHHCSEEEE
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCC---HHHHH---HHHHCCCEE----eCC---HHHHHhcCCEEEE
Confidence 57999999 89999999999999999 9999999620 23442 222334432 123 4455678999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+.....
T Consensus 90 ~vp~~~ 95 (312)
T 3qsg_A 90 LVTAQA 95 (312)
T ss_dssp CSCTTT
T ss_pred ecCchh
Confidence 987654
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00044 Score=57.58 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=56.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++++|+|+ |..|+.++..|.+.|. +|+++.|+... .+|++.+ +.+. ..+..+...++.+.+.+.+.+.++|+|
T Consensus 148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~--~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDF--FEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTH--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCch--HHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 478999995 8999999999999996 89999997321 2333222 2222 124445555676755556677889999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|++.+..
T Consensus 225 INaTp~G 231 (312)
T 3t4e_A 225 TNGTKVG 231 (312)
T ss_dssp EECSSTT
T ss_pred EECCcCC
Confidence 9998764
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00051 Score=58.08 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=52.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-HHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-QSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~l~~~~~~~d~v~~ 81 (312)
+++|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+... ..++.. ..+. +.+..+.+++|+||.
T Consensus 8 ~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~-----~~~~~~a~---~~G~~~----~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 8 SRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRS-----RSGAKSAV---DEGFDV----SADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSC-----HHHHHHHH---HTTCCE----ESCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH---HcCCee----eCCHHHHHHhcccCCCEEEE
Confidence 47899999 8999999999999999999999998 66654333 335532 2343 344445567899999
Q ss_pred cCCC
Q 021470 82 AISG 85 (312)
Q Consensus 82 ~~~~ 85 (312)
+.+.
T Consensus 75 avP~ 78 (341)
T 3ktd_A 75 AVPM 78 (341)
T ss_dssp CSCH
T ss_pred eCCH
Confidence 9874
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=62.67 Aligned_cols=76 Identities=14% Similarity=0.231 Sum_probs=51.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-c----CCCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-E----QGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-~----~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
+|+|.|+| +|.+|..++..|.+.|++|++++|+ +++.+.+.... . +++.+ ...+.-..++.++++++|
T Consensus 29 ~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~-----~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aD 101 (356)
T 3k96_A 29 KHPIAILG-AGSWGTALALVLARKGQKVRLWSYE-----SDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVT 101 (356)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSC-----HHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCC
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCC-----HHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCC
Confidence 57999999 7999999999999999999999998 66654333211 0 12111 001100124556778999
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||.+...
T Consensus 102 vVilaVp~ 109 (356)
T 3k96_A 102 DILIVVPS 109 (356)
T ss_dssp EEEECCCH
T ss_pred EEEECCCH
Confidence 99988754
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00058 Score=58.32 Aligned_cols=91 Identities=18% Similarity=0.231 Sum_probs=55.9
Q ss_pred CcEEEEEcCCchhhHHHHH-HHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVK-ASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++|.|+||||++|+.+++ .|.++. .++..++.+..... . ..+..... ...+..+++. +.++|+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~---~---~~~~~~~~--~v~~~~~~~~----~~~vDv 71 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGK---A---PSFAKNET--TLKDATSIDD----LKKCDV 71 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSB---C---CTTCCSCC--BCEETTCHHH----HHTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCC---H---HHcCCCce--EEEeCCChhH----hcCCCE
Confidence 4799999999999999999 666665 35666654322210 0 11211111 2223444444 468999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
||.|++.. ..+.++..+.++| ++.+|.
T Consensus 72 vf~a~~~~--------~s~~~~~~~~~~G-~k~~VI 98 (377)
T 3uw3_A 72 IITCQGGD--------YTNDVFPKLRAAG-WNGYWI 98 (377)
T ss_dssp EEECSCHH--------HHHHHHHHHHHTT-CCSEEE
T ss_pred EEECCChH--------HHHHHHHHHHHCC-CCEEEE
Confidence 99998753 3556667777788 754443
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00061 Score=56.23 Aligned_cols=92 Identities=15% Similarity=0.186 Sum_probs=64.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhcc------CCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFKE------QGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~~------~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|||.|+| +|++|+.++..|+.++ .++..++.. +++.+ ...+|.+ ....++.. .|++ .++
T Consensus 1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~-----~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~ 68 (294)
T 2x0j_A 1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK 68 (294)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGT
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCC-----CCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhC
Confidence 6899999 5999999999998887 589998886 43332 1122221 22333332 1333 478
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+|+.++|....+ ..|....+.+++++.++.
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~ 109 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA 109 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999976532 167888899999998876
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00021 Score=57.68 Aligned_cols=72 Identities=21% Similarity=0.322 Sum_probs=50.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-----------hhhhc-cCCCeEEEccCCCHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-----------LLSFK-EQGAKLVSGSFNDYQSLV 70 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~l~-~~~~~~v~~D~~d~~~l~ 70 (312)
+++|.|+| .|.+|..+++.|++.|++|++++|+ +++... ...+. ..+... ..+..
T Consensus 19 ~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 85 (245)
T 3dtt_A 19 GMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRD-----PKATLARAEPDAMGAPPFSQWLPEHPHVH-------LAAFA 85 (245)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHTCC-------CCHHHHGGGSTTCE-------EEEHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC-----hhhhhhhhhhhhhcchhhhHHHhhcCcee-------ccCHH
Confidence 58999998 9999999999999999999999998 555000 01111 111111 12344
Q ss_pred HHhccCCEEEEcCCCCc
Q 021470 71 NAVKLVDVVICAISGVH 87 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~ 87 (312)
++++++|+||.+.....
T Consensus 86 e~~~~aDvVilavp~~~ 102 (245)
T 3dtt_A 86 DVAAGAELVVNATEGAS 102 (245)
T ss_dssp HHHHHCSEEEECSCGGG
T ss_pred HHHhcCCEEEEccCcHH
Confidence 56678999999987654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00043 Score=57.47 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=53.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|+.+++.|...|.+|++++|+ +++.+... ..+++.+. .+++.++++++|+|+.+
T Consensus 155 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~-----~~~~~~~~---~~g~~~~~-----~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 155 GANVAVLG-LGRVGMSVARKFAALGAKVKVGARE-----SDLLARIA---EMGMEPFH-----ISKAAQELRDVDVCINT 220 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH---HTTSEEEE-----GGGHHHHTTTCSEEEEC
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHH---HCCCeecC-----hhhHHHHhcCCCEEEEC
Confidence 47999999 7999999999999999999999998 65543222 23555432 24567778899999999
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
++.
T Consensus 221 ~p~ 223 (293)
T 3d4o_A 221 IPA 223 (293)
T ss_dssp CSS
T ss_pred CCh
Confidence 865
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0004 Score=57.86 Aligned_cols=69 Identities=26% Similarity=0.329 Sum_probs=53.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.+|+.+++.|...|.+|++++|+ +++.+.+. ..+++.+. .+++.++++++|+|+.+
T Consensus 157 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~-----~~~~~~~~---~~g~~~~~-----~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 157 GSQVAVLG-LGRTGMTIARTFAALGANVKVGARS-----SAHLARIT---EMGLVPFH-----TDELKEHVKDIDICINT 222 (300)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHH---HTTCEEEE-----GGGHHHHSTTCSEEEEC
T ss_pred CCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HCCCeEEc-----hhhHHHHhhCCCEEEEC
Confidence 47899999 6999999999999999999999998 65553222 23454432 23577788899999999
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
++.
T Consensus 223 ~p~ 225 (300)
T 2rir_A 223 IPS 225 (300)
T ss_dssp CSS
T ss_pred CCh
Confidence 886
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00016 Score=61.51 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=54.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ ++..+ .|..+. +.+.+... ++|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~-----~~~~~~~~~~---ga~~~-~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGS-----EDKLRRAKAL---GADET-VNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTSTTHHHHHHHHTTTTCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EcCCcccHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 7777555544 33322 355543 34444443 699
Q ss_pred EEEEcCC
Q 021470 78 VVICAIS 84 (312)
Q Consensus 78 ~v~~~~~ 84 (312)
+||++++
T Consensus 238 ~vi~~~g 244 (343)
T 2eih_A 238 KVVDHTG 244 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00029 Score=59.40 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc--CC----C-----eEE------E-c
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE--QG----A-----KLV------S-G 61 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~--~~----~-----~~v------~-~ 61 (312)
|||.+|.|.|. |.+|+.+++.|.++. .+|.++.-...+ +++...+..+.. .. + .+. . .
T Consensus 1 mM~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~--~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~ 77 (335)
T 1u8f_O 1 MGKVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFID--LNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIF 77 (335)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSC--HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCC--HHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEE
Confidence 66679999995 999999999998764 788887542011 444432221111 00 0 111 1 1
Q ss_pred cCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 62 D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
...|++.+.-...++|+||.+++.... ...+..+.++| +++++.|.
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~--------~e~a~~~l~aG-ak~V~iSa 123 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTT--------MEKAGAHLQGG-AKRVIISA 123 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCS--------HHHHGGGGGGT-CSEEEESS
T ss_pred ecCCHHHCccccCCCCEEEECCCchhh--------HHHHHHHHhCC-CeEEEecc
Confidence 123444431112489999999987642 24555566778 88888763
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0016 Score=56.16 Aligned_cols=87 Identities=22% Similarity=0.288 Sum_probs=61.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|++|+|+| +|..|+.++++|.+.|++|++++.+..... ..+ .-..+..|+.|.+.+.++.+++|.|+..
T Consensus 1 M~~Ililg-~g~~g~~~~~a~~~~G~~v~~~~~~~~~~~-------~~~---~~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIG-GGQLGKMMTLEAKKMGFYVIVLDPTPRSPA-------GQV---ADEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTT-------GGG---SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCch-------hhh---CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 47999999 589999999999999999999987533210 111 1245678999999999988899998864
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
..... ..+++.+.+.| ++
T Consensus 70 ~e~~~---------~~~~~~l~~~g-i~ 87 (380)
T 3ax6_A 70 LEHID---------VQTLKKLYNEG-YK 87 (380)
T ss_dssp CSCSC---------HHHHHHHHHTT-CE
T ss_pred ccCCC---------HHHHHHHHHCC-Ce
Confidence 42211 23455566667 65
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.48 E-value=8.9e-05 Score=62.32 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=50.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCC--hHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVD--IEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+|+|.|+| .|.+|..++..|++.| ++|+++.|+..... .++. +.+...++ .. . +..++++++|+|
T Consensus 24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~---~~~~~~g~---~~-~----s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALR---ARAAELGV---EP-L----DDVAGIACADVV 91 (317)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHH---HHHHHTTC---EE-E----SSGGGGGGCSEE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHH---HHHHHCCC---CC-C----CHHHHHhcCCEE
Confidence 47999999 8999999999999999 99999999832100 0222 22333444 11 0 233457789999
Q ss_pred EEcCCCCc
Q 021470 80 ICAISGVH 87 (312)
Q Consensus 80 ~~~~~~~~ 87 (312)
|.+.+...
T Consensus 92 i~avp~~~ 99 (317)
T 4ezb_A 92 LSLVVGAA 99 (317)
T ss_dssp EECCCGGG
T ss_pred EEecCCHH
Confidence 99987653
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00023 Score=63.26 Aligned_cols=76 Identities=13% Similarity=0.243 Sum_probs=52.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|++++|.|+| .|.+|..++..|.+.|++|+++.|+ +++.+.+... ...++.. ..+.+++.+.++.+|+|
T Consensus 13 ~~~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~~r~-----~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvV 82 (480)
T 2zyd_A 13 MSKQQIGVVG-MAVMGRNLALNIESRGYTVSIFNRS-----REKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRI 82 (480)
T ss_dssp --CBSEEEEC-CSHHHHHHHHHHHTTTCCEEEECSS-----HHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEE
T ss_pred cCCCeEEEEc-cHHHHHHHHHHHHhCCCeEEEEeCC-----HHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEE
Confidence 7788999999 9999999999999999999999998 7666433221 1013221 23444433333459999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|.+....
T Consensus 83 il~Vp~~ 89 (480)
T 2zyd_A 83 LLMVKAG 89 (480)
T ss_dssp EECSCSS
T ss_pred EEECCCH
Confidence 9998764
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00027 Score=57.97 Aligned_cols=95 Identities=11% Similarity=0.145 Sum_probs=55.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+++|+|.|++|.+|+.+++.+.+. +.++.+. +|+.+...-.....+..+...++.+ .+++.+++.++|+||
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v-------~~dl~~ll~~aDVvI 93 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI-------TDDPESAFSNTEGIL 93 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC-------BSCHHHHTTSCSEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCcee-------eCCHHHHhcCCCEEE
Confidence 468999999999999999998865 5777776 4442211000000000001112211 124556667899998
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.++. .......++.|.++| +..++
T Consensus 94 DFT~--------p~a~~~~~~~~l~~G-v~vVi 117 (288)
T 3ijp_A 94 DFSQ--------PQASVLYANYAAQKS-LIHII 117 (288)
T ss_dssp ECSC--------HHHHHHHHHHHHHHT-CEEEE
T ss_pred EcCC--------HHHHHHHHHHHHHcC-CCEEE
Confidence 8764 334556677777888 44443
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0029 Score=54.72 Aligned_cols=68 Identities=22% Similarity=0.320 Sum_probs=53.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| .|.+|+.+++++.+.|++|++++.+..... . ..--..+..|+.|.+.+.++++.+|+|..
T Consensus 14 ~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~-------~---~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 14 GKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPC-------A---QVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTT-------T---TTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCch-------H---HhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 46899999 889999999999999999999987643210 0 11224567899999999999999998843
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00086 Score=55.45 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=64.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHH--H--hhhhc---cCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQ--M--LLSFK---EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~--~~~l~---~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|||.|+|| |.+|..++..|+..|+ +|..++++ +++.+ . +.... .....+... .| .++++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~-----~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK 68 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECC-----hHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC
Confidence 58999997 9999999999999987 99999998 65543 1 11111 122333322 12 34688
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+||.+++..... ..|....+.+++.+.+.+
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~ 109 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA 109 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999876432 146677888888888775
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00017 Score=60.17 Aligned_cols=73 Identities=25% Similarity=0.368 Sum_probs=53.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+..+.+ ++..+ .|..+.+++.+.+.++|+||+
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~-~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLAL---GAEEA-ATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHHT---TCSEE-EEGGGHHHHHHHTTSEEEEEE-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EECCcchhHHHHhcCceEEEE-
Confidence 3689999999999999999999999999999997 4444333333 44432 355541344444588999999
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
++.
T Consensus 196 ~g~ 198 (302)
T 1iz0_A 196 VRG 198 (302)
T ss_dssp CSC
T ss_pred CCH
Confidence 775
|
| >3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00083 Score=56.60 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=59.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc--C----C-C------e------EEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE--Q----G-A------K------LVS 60 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~--~----~-~------~------~v~ 60 (312)
||+++|.|.|+ |.+|+.+++.|.++. .+|.++.-...+ ++....+....+ . + + . .+.
T Consensus 1 mm~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~--~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~ 77 (337)
T 3e5r_O 1 MGKIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFIT--TDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVT 77 (337)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSC--HHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEE
T ss_pred CCceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCC--HHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEE
Confidence 66679999998 999999999998874 677777531011 333222110000 0 0 0 0 111
Q ss_pred -ccCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 61 -GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 61 -~D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
..-.|++.+.-...++|+||.+++... ....+..+.++| ++++|.|
T Consensus 78 v~~~~dp~~l~w~~~~vDvV~eaTg~~~--------~~e~a~~~l~aG-ak~VVIs 124 (337)
T 3e5r_O 78 VFGIRNPDEIPWAEAGAEYVVESTGVFT--------DKEKAAAHLKGG-AKKVVIS 124 (337)
T ss_dssp EECCSCGGGCCHHHHTCSEEEECSSSCC--------SHHHHTHHHHTT-CSEEEES
T ss_pred EEecCChHHccccccCCCEEEECCCchh--------hHHHHHHHHHcC-CCEEEEe
Confidence 112255554211248999999998764 235556666778 8877763
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00018 Score=58.09 Aligned_cols=69 Identities=16% Similarity=0.224 Sum_probs=50.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC----eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH----ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|+ |+|.|+| .|.+|..+++.|++.|+ +|++++|+ +++.+.+.. ..++.. ..+ ..++++++
T Consensus 1 M~-~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~-----~~~~~~~~~--~~g~~~----~~~---~~e~~~~a 64 (247)
T 3gt0_A 1 MD-KQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLN-----TANLKNASE--KYGLTT----TTD---NNEVAKNA 64 (247)
T ss_dssp CC-CCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSC-----HHHHHHHHH--HHCCEE----CSC---HHHHHHHC
T ss_pred CC-CeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCC-----HHHHHHHHH--HhCCEE----eCC---hHHHHHhC
Confidence 54 7999999 99999999999999998 99999998 666643321 113332 223 34456679
Q ss_pred CEEEEcCCC
Q 021470 77 DVVICAISG 85 (312)
Q Consensus 77 d~v~~~~~~ 85 (312)
|+||.+..+
T Consensus 65 DvVilav~~ 73 (247)
T 3gt0_A 65 DILILSIKP 73 (247)
T ss_dssp SEEEECSCT
T ss_pred CEEEEEeCH
Confidence 999999843
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00034 Score=59.25 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=54.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|...++.+...|.+|++++++ +++.+..+.+ ++..+ .|..+ .+.+.+... ++|
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~~-~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST-----DEKLKIAKEY---GAEYL-INASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCcEE-EeCCCchHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 7777655544 33322 23333 244444443 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||++++.
T Consensus 220 ~vid~~g~ 227 (334)
T 3qwb_A 220 ASFDSVGK 227 (334)
T ss_dssp EEEECCGG
T ss_pred EEEECCCh
Confidence 99999985
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0011 Score=55.40 Aligned_cols=96 Identities=18% Similarity=0.220 Sum_probs=63.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhc------cCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFK------EQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~------~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
+++|.|+|+ |.+|..++..|+..|+ +|++++++.... ..+... ..+. .....+...+ |. +.+++
T Consensus 8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~-~~~g~a-~dl~~~~~~~~~~~~i~~t~--d~----~a~~~ 78 (315)
T 3tl2_A 8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLEN-PTKGKA-LDMLEASPVQGFDANIIGTS--DY----ADTAD 78 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHH-HHHHHH-HHHHHHHHHHTCCCCEEEES--CG----GGGTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHH-HHHHhh-hhHHHhhhhccCCCEEEEcC--CH----HHhCC
Confidence 468999995 9999999999999998 999998872100 111111 1111 1223333221 22 35789
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+||.+++..... ..|....+.+++++.+.+
T Consensus 79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~ 118 (315)
T 3tl2_A 79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS 118 (315)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999876432 146777888888888876
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00019 Score=63.66 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=51.0
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE------------ccCCC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS------------GSFND 65 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~------------~D~~d 65 (312)
|+ ||+|.|+| .|.+|..++..|.+. |++|++++|+ +++.+.+. ..+..+.. ..+.-
T Consensus 2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~-----~~~~~~l~---~g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVN-----ESRINAWN---SPTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSC-----HHHHHHHT---SSSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECC-----HHHHHHHh---CCCCCcCCCCHHHHHHHhhcCCEEE
Confidence 55 57999999 899999999999999 7999999998 66664432 11110000 00100
Q ss_pred HHHHHHHhccCCEEEEcCCCC
Q 021470 66 YQSLVNAVKLVDVVICAISGV 86 (312)
Q Consensus 66 ~~~l~~~~~~~d~v~~~~~~~ 86 (312)
..++.++++++|+||.+.+..
T Consensus 73 t~~~~e~~~~aDvViiaVptp 93 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTP 93 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCC
T ss_pred ECCHHHHHhcCCEEEEEcCCc
Confidence 012345567899999998643
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00016 Score=60.86 Aligned_cols=71 Identities=27% Similarity=0.252 Sum_probs=49.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|++|+|.|+| .|.+|..++..|++.| ++|+++.|+... ++.+.+. ..++.+. .+ ..++++++
T Consensus 20 ~~~mkI~iIG-~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~---~~~~~l~---~~G~~~~----~~---~~e~~~~a 85 (322)
T 2izz_A 20 FQSMSVGFIG-AGQLAFALAKGFTAAGVLAAHKIMASSPDMDL---ATVSALR---KMGVKLT----PH---NKETVQHS 85 (322)
T ss_dssp --CCCEEEES-CSHHHHHHHHHHHHTTSSCGGGEEEECSCTTS---HHHHHHH---HHTCEEE----SC---HHHHHHHC
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCCCcceEEEECCCccH---HHHHHHH---HcCCEEe----CC---hHHHhccC
Confidence 3467999999 7999999999999999 899999887320 1442222 2345432 12 23456689
Q ss_pred CEEEEcCCC
Q 021470 77 DVVICAISG 85 (312)
Q Consensus 77 d~v~~~~~~ 85 (312)
|+||.+..+
T Consensus 86 DvVilav~~ 94 (322)
T 2izz_A 86 DVLFLAVKP 94 (322)
T ss_dssp SEEEECSCG
T ss_pred CEEEEEeCH
Confidence 999999864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00033 Score=59.11 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=54.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|...++.+...|.+|++++++ +++.+.++.+ ++..+ .|..+ .+.+.+... ++|
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~-~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS-----PEKAAHAKAL---GAWET-IDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHc---CCCEE-EeCCCccHHHHHHHHhCCCCce
Confidence 3689999999999999999999999999999998 7777665554 33222 24433 244444443 699
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||++++.
T Consensus 212 vvid~~g~ 219 (325)
T 3jyn_A 212 VVYDGVGQ 219 (325)
T ss_dssp EEEESSCG
T ss_pred EEEECCCh
Confidence 99999885
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.01 Score=48.90 Aligned_cols=86 Identities=22% Similarity=0.240 Sum_probs=57.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.++|+|.|+||..|+.+++.+++.|+++.......... + ...++.++ .+ +.++.+ ++|+++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g--------~--~i~G~~vy----~s---l~el~~~~~~Dv~I 69 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGG--------M--EVLGVPVY----DT---VKEAVAHHEVDASI 69 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT--------C--EETTEEEE----SS---HHHHHHHSCCSEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCC--------c--eECCEEee----CC---HHHHhhcCCCCEEE
Confidence 46899999999999999999999999865443321100 0 01122221 23 344444 899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.++ .....+++.|.+.| ++.+|.
T Consensus 70 i~vp~--------~~~~~~~~ea~~~G-i~~vVi 94 (288)
T 1oi7_A 70 IFVPA--------PAAADAALEAAHAG-IPLIVL 94 (288)
T ss_dssp ECCCH--------HHHHHHHHHHHHTT-CSEEEE
T ss_pred EecCH--------HHHHHHHHHHHHCC-CCEEEE
Confidence 88764 34678888888999 886554
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=4.6e-05 Score=65.50 Aligned_cols=76 Identities=20% Similarity=0.304 Sum_probs=49.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-----CCCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-----QGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++|.|+| .|.+|..++..|.+.|++|++++|+ +++.+.+..... .+..+ ...+.-..+..++++++|
T Consensus 15 M~kI~iIG-~G~mG~~la~~L~~~G~~V~~~~r~-----~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~aD 87 (366)
T 1evy_A 15 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAE 87 (366)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHTTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCS
T ss_pred cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHcCccccccccccc-ccceeeeCCHHHHHcCCC
Confidence 34999999 7999999999999999999999998 666543322110 01100 000000012445667899
Q ss_pred EEEEcCCC
Q 021470 78 VVICAISG 85 (312)
Q Consensus 78 ~v~~~~~~ 85 (312)
+||.+...
T Consensus 88 vVilav~~ 95 (366)
T 1evy_A 88 IILFVIPT 95 (366)
T ss_dssp SEEECCCH
T ss_pred EEEECCCh
Confidence 99999864
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00027 Score=58.72 Aligned_cols=66 Identities=17% Similarity=0.291 Sum_probs=49.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..+++.|.+.|++|++++|+ +++.+. +...++.+ ..+ ..++++++|+||.+.
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~---~~~~g~~~----~~~---~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVF-----PDACKE---FQDAGEQV----VSS---PADVAEKADRIITML 64 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSS-----THHHHH---HHTTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHH---HHHcCCee----cCC---HHHHHhcCCEEEEeC
Confidence 4799999 8999999999999999999999998 556533 32334432 123 344566799999987
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
+.
T Consensus 65 p~ 66 (296)
T 2gf2_A 65 PT 66 (296)
T ss_dssp SS
T ss_pred CC
Confidence 54
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.39 E-value=0.002 Score=54.07 Aligned_cols=93 Identities=15% Similarity=0.231 Sum_probs=64.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhccC-----CCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKEQ-----GAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~~-----~~~~v~~D~~d~~~l~~~~~ 74 (312)
.++|.|+|+ |.+|..++..|+..|. +|+.++++ .++++- ...+.+. ...++.. .|++ .++
T Consensus 19 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~ 86 (331)
T 4aj2_A 19 QNKITVVGV-GAVGMACAISILMKDLADELALVDVI-----EDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTA 86 (331)
T ss_dssp SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCC-----hHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhC
Confidence 579999996 9999999999999885 89999887 554431 1222211 2233322 2332 478
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+||.+++..... ..|....+.+++++.++.
T Consensus 87 ~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~ 127 (331)
T 4aj2_A 87 NSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS 127 (331)
T ss_dssp TEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999875421 266777888888888875
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00037 Score=61.90 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|++++|.|+| .|.+|..++..|.+.|++|.++.|+ +++.+.+... ...++. . ..+.+++.+.++++|+|
T Consensus 3 m~~~~IgvIG-~G~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~gi~--~--~~s~~e~v~~l~~aDvV 72 (474)
T 2iz1_A 3 MAQANFGVVG-MAVMGKNLALNVESRGYTVAIYNRT-----TSKTEEVFKEHQDKNLV--F--TKTLEEFVGSLEKPRRI 72 (474)
T ss_dssp CTTBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHHHTTTSCEE--E--CSSHHHHHHTBCSSCEE
T ss_pred CCCCcEEEEe-eHHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHhCcCCCeE--E--eCCHHHHHhhccCCCEE
Confidence 6667999999 8999999999999999999999998 6666433221 111322 1 23444443333459999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
+.+....
T Consensus 73 ilavp~~ 79 (474)
T 2iz1_A 73 MLMVQAG 79 (474)
T ss_dssp EECCCTT
T ss_pred EEEccCc
Confidence 9988764
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00019 Score=60.35 Aligned_cols=67 Identities=28% Similarity=0.505 Sum_probs=48.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+|+|.|+| .|.+|..++..|.+.|++|++++|+ +++.+. +...++.. ..+ ..++++++|+||.+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~-----~~~~~~---~~~~g~~~----~~~---~~~~~~~~DvVi~a 93 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRT-----AEKCDL---FIQEGARL----GRT---PAEVVSTCDITFAC 93 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----GGGGHH---HHHTTCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCC-----HHHHHH---HHHcCCEE----cCC---HHHHHhcCCEEEEe
Confidence 37899999 7999999999999999999999887 444322 22234432 123 33456689999998
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
...
T Consensus 94 v~~ 96 (316)
T 2uyy_A 94 VSD 96 (316)
T ss_dssp CSS
T ss_pred CCC
Confidence 873
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0011 Score=56.02 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=55.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|.|+||||++|..+++.|.++.| ++..++...+.. +.+.-.+.+...-++.. ..++++|+||
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG--------~~~~~~~~~~~~~~~~~-----~~~~~~Dvvf 68 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQG--------RKLAFRGQEIEVEDAET-----ADPSGLDIAL 68 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSS--------CEEEETTEEEEEEETTT-----SCCTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCC--------CceeecCCceEEEeCCH-----HHhccCCEEE
Confidence 6899999999999999998888743 566665332211 11111122222223322 2357899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
.|++.. ..+..+..+.++| ++.+-.|
T Consensus 69 ~a~~~~--------~s~~~a~~~~~~G-~~vID~S 94 (344)
T 3tz6_A 69 FSAGSA--------MSKVQAPRFAAAG-VTVIDNS 94 (344)
T ss_dssp ECSCHH--------HHHHHHHHHHHTT-CEEEECS
T ss_pred ECCChH--------HHHHHHHHHHhCC-CEEEECC
Confidence 998743 3556677777788 6433344
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00049 Score=57.01 Aligned_cols=71 Identities=23% Similarity=0.254 Sum_probs=50.7
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l~~~~~~~d 77 (312)
|++|+|.|+| .|.+|..++..|.+. |++|++++|+ +++.+.+.. .++. ....|+ .++++++|
T Consensus 4 M~~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~-----~~~~~~~~~---~g~~~~~~~~~------~~~~~~aD 68 (290)
T 3b1f_A 4 MEEKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNRS-----DRSRDIALE---RGIVDEATADF------KVFAALAD 68 (290)
T ss_dssp GCCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHH---TTSCSEEESCT------TTTGGGCS
T ss_pred cccceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcCC-----HHHHHHHHH---cCCcccccCCH------HHhhcCCC
Confidence 6678999999 999999999999988 5799999887 666543322 2331 112222 23457899
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+||.+....
T Consensus 69 vVilavp~~ 77 (290)
T 3b1f_A 69 VIILAVPIK 77 (290)
T ss_dssp EEEECSCHH
T ss_pred EEEEcCCHH
Confidence 999998754
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00016 Score=62.90 Aligned_cols=74 Identities=28% Similarity=0.243 Sum_probs=50.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEE-----------EccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-----------SGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-----------~~D~~d~~~l~~ 71 (312)
+|+|.|+| +|++|..++..|.+ |++|++++|+ +++.+.+.. ....+. .+.+.-..++.+
T Consensus 36 ~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~-----~~~v~~l~~---g~~~i~e~~l~~ll~~~~~~l~~ttd~~e 105 (432)
T 3pid_A 36 FMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIV-----QAKVDMLNQ---KISPIVDKEIQEYLAEKPLNFRATTDKHD 105 (432)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSC-----HHHHHHHHT---TCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecC-----HHHhhHHhc---cCCccccccHHHHHhhccCCeEEEcCHHH
Confidence 57999999 89999999998887 9999999998 777644322 110000 001100123456
Q ss_pred HhccCCEEEEcCCCC
Q 021470 72 AVKLVDVVICAISGV 86 (312)
Q Consensus 72 ~~~~~d~v~~~~~~~ 86 (312)
+++++|+||.+.+..
T Consensus 106 a~~~aDvViiaVPt~ 120 (432)
T 3pid_A 106 AYRNADYVIIATPTD 120 (432)
T ss_dssp HHTTCSEEEECCCCE
T ss_pred HHhCCCEEEEeCCCc
Confidence 678999999988765
|
| >3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0011 Score=55.35 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=59.3
Q ss_pred CCCcEEEEEcCCchhhHH-HHHHHHhC-CCeEEE-EECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 1 MEKSKVLIIGGTGYLGKR-LVKASLAL-GHETYV-LHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~-~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|++++|.|+| .|.+|.. .++.|.+. +.++.+ ++|+ +++.+.+... .++.. +.|.+ ++++++|
T Consensus 4 M~~~~igiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~-----~~~~~~~a~~--~~~~~----~~~~~---~ll~~~D 68 (308)
T 3uuw_A 4 MKNIKMGMIG-LGSIAQKAYLPILTKSERFEFVGAFTPN-----KVKREKICSD--YRIMP----FDSIE---SLAKKCD 68 (308)
T ss_dssp -CCCEEEEEC-CSHHHHHHTHHHHTSCSSSEEEEEECSC-----HHHHHHHHHH--HTCCB----CSCHH---HHHTTCS
T ss_pred cccCcEEEEe-cCHHHHHHHHHHHHhCCCeEEEEEECCC-----HHHHHHHHHH--cCCCC----cCCHH---HHHhcCC
Confidence 5578999999 7999996 88888774 578885 4565 6666433221 12221 34544 4445899
Q ss_pred EEEEcCCCCccc-------------------cchhHhHHHHHHHHHHhCCCce
Q 021470 78 VVICAISGVHIR-------------------SHQILLQLKLVDAIKEAGNVKR 111 (312)
Q Consensus 78 ~v~~~~~~~~~~-------------------~~~~~~~~~l~~aa~~~~~v~~ 111 (312)
+|+.+.+...-. ..+......++++|++.| +..
T Consensus 69 ~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g-~~~ 120 (308)
T 3uuw_A 69 CIFLHSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN-LNL 120 (308)
T ss_dssp EEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT-CCE
T ss_pred EEEEeCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC-CEE
Confidence 999887764310 134555666777777766 443
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00053 Score=58.37 Aligned_cols=75 Identities=24% Similarity=0.205 Sum_probs=54.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHh--ccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAV--KLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~--~~~ 76 (312)
..+|+|+||+|.+|..+++.+... |.+|++++++ +++.+..+.+ ++..+ .|..+. +.+.+.. .++
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~-----~~~~~~~~~~---g~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYV-INASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCE
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC-----HHHHHHHHHh---CCCEE-ecCCCccHHHHHHHHhcCCCc
Confidence 368999999999999999999998 9999999998 7776555544 33322 344443 3355554 369
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|+||++++..
T Consensus 242 d~vi~~~g~~ 251 (347)
T 1jvb_A 242 DAVIDLNNSE 251 (347)
T ss_dssp EEEEESCCCH
T ss_pred eEEEECCCCH
Confidence 9999999853
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00016 Score=61.19 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=51.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC--CCCCCChHHHHHhhhhccCCC------eEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHR--PEIGVDIEKVQMLLSFKEQGA------KLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~l~~~~~------~~v~~D~~d~~~l~~~~~~ 75 (312)
|+|+|+| .|.+|..++..|.+.|++|+++.| + +++.+.+. ..+. +.......+++++.+++++
T Consensus 1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~-----~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (335)
T 1txg_A 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD-----TEILKSIS---AGREHPRLGVKLNGVEIFWPEQLEKCLEN 71 (335)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG-----HHHHHHHH---TTCCBTTTTBCCCSEEEECGGGHHHHHTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCC-----HHHHHHHH---HhCcCcccCccccceEEecHHhHHHHHhc
Confidence 4899999 699999999999999999999999 6 55553322 2221 1000012223345566789
Q ss_pred CCEEEEcCCCC
Q 021470 76 VDVVICAISGV 86 (312)
Q Consensus 76 ~d~v~~~~~~~ 86 (312)
+|+||.+....
T Consensus 72 ~D~vi~~v~~~ 82 (335)
T 1txg_A 72 AEVVLLGVSTD 82 (335)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEcCChH
Confidence 99999998764
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00049 Score=58.77 Aligned_cols=74 Identities=24% Similarity=0.323 Sum_probs=54.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHh-ccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAV-KLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~-~~~d~ 78 (312)
..+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ ++..+ .|..+. +.+.+.. .++|+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---Ga~~~-~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS-----TGKCEACERL---GAKRG-INYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHHSSCEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCCEE-EeCCchHHHHHHHHHhCCCceE
Confidence 3689999999999999999999999999999998 7777665554 33322 344332 3333332 26999
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
||++++.
T Consensus 239 vid~~g~ 245 (353)
T 4dup_A 239 ILDMIGA 245 (353)
T ss_dssp EEESCCG
T ss_pred EEECCCH
Confidence 9999985
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00025 Score=58.07 Aligned_cols=69 Identities=13% Similarity=0.196 Sum_probs=50.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++++|+| +|.+|+.++..|.+.|. +|+++.|+ ++++ +.+.. ++.. ...+++.+++.++|+||+
T Consensus 117 ~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~-----~~~a---~~la~-~~~~-----~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 117 DAYILILG-AGGASKGIANELYKIVRPTLTVANRT-----MSRF---NNWSL-NINK-----INLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHTTCCSCCEEECSC-----GGGG---TTCCS-CCEE-----ECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCC-----HHHH---HHHHH-hccc-----ccHhhHHHHhcCCCEEEE
Confidence 46899999 58999999999999997 99999998 4444 22321 2222 235567777889999999
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
+.+..
T Consensus 182 aTp~G 186 (277)
T 3don_A 182 TTPAG 186 (277)
T ss_dssp CCC--
T ss_pred CccCC
Confidence 98753
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0008 Score=58.54 Aligned_cols=70 Identities=27% Similarity=0.380 Sum_probs=54.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
++++|+|+| .|.+|+.+++++.+.|++|++++ ..... . ..+ ......+.+|+.|.+.+.++.+.+|+|..
T Consensus 23 ~~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p--~-----~~~-ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 23 NSRKVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSP--A-----KQI-SAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCT--T-----GGG-CCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCc--H-----HHh-ccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 367999999 78999999999999999999998 53322 1 111 12224578899999999999999998864
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00037 Score=56.68 Aligned_cols=68 Identities=21% Similarity=0.247 Sum_probs=50.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|.|+| .|.+|+.+++.|.+.|++|.+++|+ +++.+.+... .++.. ..+ +.++++++|+||.+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~-----~~~~~~~~~~--~g~~~----~~~---~~~~~~~~D~Vi~~ 67 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAEQ--LALPY----AMS---HQDLIDQVDLVILG 67 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHHH--HTCCB----CSS---HHHHHHTCSEEEEC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCC-----HHHHHHHHHH--cCCEe----eCC---HHHHHhcCCEEEEE
Confidence 57999999 8999999999999999999999988 6665433211 13321 223 34556689999999
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
...
T Consensus 68 v~~ 70 (259)
T 2ahr_A 68 IKP 70 (259)
T ss_dssp SCG
T ss_pred eCc
Confidence 874
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00097 Score=57.46 Aligned_cols=68 Identities=22% Similarity=0.305 Sum_probs=54.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+++|+|+| .|.+|+.+++++.+.|++|++++....... .. .--+.+..|+.|.+.+.++.+.+|+|..
T Consensus 12 ~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~-------~~---~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 12 GATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPC-------RY---VAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTT-------GG---GSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChh-------hh---hCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 57899999 899999999999999999999987643221 11 1235678999999999999999998854
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0019 Score=54.17 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=59.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccC-----CCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQ-----GAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~-----~~~~v~~D~~d~~~l~~~~~~ 75 (312)
++||.|+|+ |++|..++..|+..+. +|.+++.+..... ... ..+.+. ++.+. . .+ .+++++
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~-g~~---~dl~~~~~~~~~~~i~-~--~~----~~a~~~ 74 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAI-GEA---MDINHGLPFMGQMSLY-A--GD----YSDVKD 74 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CC-HHH---HHHTTSCCCTTCEEEC-----C----GGGGTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHH-HHH---HHHHHhHHhcCCeEEE-E--CC----HHHhCC
Confidence 368999997 9999999999999886 8999988743321 111 222111 22221 1 22 345889
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+||.+++..... ..|....+.+++.+.+..
T Consensus 75 aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~ 114 (318)
T 1y6j_A 75 CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY 114 (318)
T ss_dssp CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999875421 245666788888888875
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0011 Score=55.88 Aligned_cols=99 Identities=18% Similarity=0.108 Sum_probs=62.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC-------eEEEEECCCCCCChHHHH-HhhhhccC---C-CeEEEccCCCHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH-------ETYVLHRPEIGVDIEKVQ-MLLSFKEQ---G-AKLVSGSFNDYQS 68 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~l~~~---~-~~~v~~D~~d~~~ 68 (312)
|+.-||.|+||+|.||+.++-.|..... ++..++.... ..+.+ ...++.+. . ...+.+ .|
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~---~~~~~Gva~DL~~~~~~~~~~~~~~--~~--- 93 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPA---LKALAGVEAELEDCAFPLLDKVVVT--AD--- 93 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHHTTCTTEEEEEEE--SC---
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCc---cccchhhhhhhhhcCccCCCcEEEc--CC---
Confidence 4456999999999999999987776531 6777776511 11111 11223221 1 122222 12
Q ss_pred HHHHhccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 69 LVNAVKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
..++++++|+|+.+++....+ ..|....+.+.+++.+..
T Consensus 94 ~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a 140 (345)
T 4h7p_A 94 PRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVA 140 (345)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhc
Confidence 346789999999999976532 267888888999988764
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0012 Score=56.04 Aligned_cols=68 Identities=24% Similarity=0.333 Sum_probs=50.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|.+|.++.|+... .+.. . ..+++.+ +++.++++.+|+|+.+
T Consensus 164 gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~--~~~~---~---~~g~~~~-------~~l~ell~~aDvV~l~ 227 (351)
T 3jtm_A 164 GKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMA--PELE---K---ETGAKFV-------EDLNEMLPKCDVIVIN 227 (351)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCC--HHHH---H---HHCCEEC-------SCHHHHGGGCSEEEEC
T ss_pred CCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccC--HHHH---H---hCCCeEc-------CCHHHHHhcCCEEEEC
Confidence 47999999 9999999999999999999999887422 1111 1 1233321 3467788899999988
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
++..
T Consensus 228 ~Plt 231 (351)
T 3jtm_A 228 MPLT 231 (351)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8754
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0036 Score=52.42 Aligned_cols=96 Identities=17% Similarity=0.277 Sum_probs=65.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|.+|++++|+.... ..+.-. ....++.++++.+|+|+.+
T Consensus 140 g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~-------------~~~~~~----~~~~~l~ell~~aDvV~l~ 201 (324)
T 3hg7_A 140 GRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRER-------------AGFDQV----YQLPALNKMLAQADVIVSV 201 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC-------------TTCSEE----ECGGGHHHHHHTCSEEEEC
T ss_pred cceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHh-------------hhhhcc----cccCCHHHHHhhCCEEEEe
Confidence 47999999 99999999999999999999999874221 111111 1245678888999999988
Q ss_pred CCCCcccc----------------------chhHhHHHHHHHHHHhCCCceeecCCC
Q 021470 83 ISGVHIRS----------------------HQILLQLKLVDAIKEAGNVKRFLPSEF 117 (312)
Q Consensus 83 ~~~~~~~~----------------------~~~~~~~~l~~aa~~~~~v~~~v~S~~ 117 (312)
.+...... -.+.....|+++.++.+ +.-..+..|
T Consensus 202 lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~-i~ga~lDV~ 257 (324)
T 3hg7_A 202 LPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGK-LGMAVLDVF 257 (324)
T ss_dssp CCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTS-SSEEEESCC
T ss_pred CCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCC-ceEEEeccC
Confidence 87543110 12334677788776554 544444443
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00043 Score=61.22 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhC-CC-eEEEEECCC
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLAL-GH-ETYVLHRPE 37 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~ 37 (312)
.+|+|.|+| .|++|..++..|.+. |+ +|++++|+.
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 368999999 999999999999999 99 999999983
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0019 Score=54.13 Aligned_cols=91 Identities=18% Similarity=0.299 Sum_probs=62.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhcc-----CCCeEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKE-----QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
+||.|+|| |.+|..++..|+..+. ++..++++ +++.+. ...+.+ .++.+.. | + .+++++
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~ 72 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKD 72 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCC
Confidence 69999997 9999999999998884 89999886 555542 222221 2333332 2 2 345889
Q ss_pred CCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++..... ..|....+.+++.+.+..
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~ 112 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG 112 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999875422 156677888888888875
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0017 Score=54.17 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=61.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHH-Hhhhhc------cCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQ-MLLSFK------EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|+|.|+|+ |.+|+.++..|+..|. +|++++++. ++.+ ...++. ..+..+...| + .++++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~-----~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKD-----GMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE 68 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSST-----THHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCch-----HHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence 58999995 9999999999999885 899998873 3332 111111 1234443222 2 23588
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
++|+||.+++..... ..|....+.+++++.+..
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~ 109 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS 109 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC
Confidence 999999999876422 256777888888888775
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00041 Score=60.46 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=52.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC-------------HHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND-------------YQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-------------~~~l 69 (312)
|.+|.|+| .|++|..++..|.+.||+|++++.+ ++|.+. +......+..-++.+ ..+.
T Consensus 21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did-----~~kV~~---ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~ 91 (444)
T 3vtf_A 21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVN-----PSIVER---LRAGRPHIYEPGLEEALGRALSSGRLSFAESA 91 (444)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHHHHH---HHTTCCSSCCTTHHHHHHHHHHTTCEEECSSH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECC-----HHHHHH---HHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCH
Confidence 57999999 9999999999999999999999988 777643 322222221111100 1123
Q ss_pred HHHhccCCEEEEcCCCCc
Q 021470 70 VNAVKLVDVVICAISGVH 87 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~~ 87 (312)
.++++.+|++|.|.+.+.
T Consensus 92 ~~ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 92 EEAVAATDATFIAVGTPP 109 (444)
T ss_dssp HHHHHTSSEEEECCCCCB
T ss_pred HHHHhcCCceEEEecCCC
Confidence 455668899999987654
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0035 Score=52.53 Aligned_cols=66 Identities=21% Similarity=0.341 Sum_probs=49.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|.+|+++.|+.... +.+ ...+. .+++.++++.+|+|+.+
T Consensus 137 gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~--------~~~----~~~~~-----~~~l~ell~~aDvV~l~ 198 (324)
T 3evt_A 137 GQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPA--------DHF----HETVA-----FTATADALATANFIVNA 198 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCC--------TTC----SEEEE-----GGGCHHHHHHCSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchh--------HhH----hhccc-----cCCHHHHHhhCCEEEEc
Confidence 47999999 99999999999999999999999974322 101 11111 23566778889999988
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 199 lPlt 202 (324)
T 3evt_A 199 LPLT 202 (324)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 7754
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00036 Score=62.00 Aligned_cols=75 Identities=21% Similarity=0.282 Sum_probs=50.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc-------------CCCHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS-------------FNDYQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D-------------~~d~~~l 69 (312)
.|+|.|+| +|++|..++..|.+.|++|++++|+ +++.+.+.. .+..+..-+ +.-..++
T Consensus 8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~-----~~~v~~l~~---~~~~i~e~gl~~~l~~~~~~~~l~~ttd~ 78 (478)
T 2y0c_A 8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVD-----QAKIDILNN---GGVPIHEPGLKEVIARNRSAGRLRFSTDI 78 (478)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHT---TCCSSCCTTHHHHHHHHHHTTCEEEECCH
T ss_pred CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHC---CCCCcCCCCHHHHHHHhcccCCEEEECCH
Confidence 37999999 9999999999999999999999998 666644332 111110000 0000123
Q ss_pred HHHhccCCEEEEcCCCC
Q 021470 70 VNAVKLVDVVICAISGV 86 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~ 86 (312)
.++++++|+||.+.+..
T Consensus 79 ~~a~~~aDvviiaVptp 95 (478)
T 2y0c_A 79 EAAVAHGDVQFIAVGTP 95 (478)
T ss_dssp HHHHHHCSEEEECCCCC
T ss_pred HHHhhcCCEEEEEeCCC
Confidence 34567899999998764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00036 Score=57.22 Aligned_cols=73 Identities=26% Similarity=0.314 Sum_probs=49.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++++|+|+ |.+|+.++..|++.|.+|+++.|+ +++.+.+. .+...+ .+...|+ +++.+ .++|+||+
T Consensus 119 ~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~-----~~~a~~l~~~~~~~~-~~~~~~~---~~~~~--~~~DivIn 186 (272)
T 1p77_A 119 NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYG-NIQAVSM---DSIPL--QTYDLVIN 186 (272)
T ss_dssp TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGS-CEEEEEG---GGCCC--SCCSEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHccccC-CeEEeeH---HHhcc--CCCCEEEE
Confidence 478999996 889999999999999999999998 77764432 222111 1212233 12110 37999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+++...
T Consensus 187 ~t~~~~ 192 (272)
T 1p77_A 187 ATSAGL 192 (272)
T ss_dssp CCCC--
T ss_pred CCCCCC
Confidence 998754
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00061 Score=57.51 Aligned_cols=96 Identities=14% Similarity=0.096 Sum_probs=60.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHH--HHHhhhhc--cCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEK--VQMLLSFK--EQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|+|.|+|| |.+|..++..|...|+ +|++++++.... +. ....+.+. .....+... +| +.++++++|+
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~--~~~~~~l~~~~~~~~~~~~i~~t--~d---~~ea~~~aDi 81 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP--EGKALDLSHVTSVVDTNVSVRAE--YS---YEAALTGADC 81 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH--HHHHHHHHHHHHHTTCCCCEEEE--CS---HHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHH--HHHHHHHHhhhhccCCCCEEEEe--CC---HHHHhCCCCE
Confidence 68999996 9999999999999998 999998873211 11 11111111 111112110 23 4556889999
Q ss_pred EEEcCCCCcccc-------------chhHhHHHHHHHHHHhC
Q 021470 79 VICAISGVHIRS-------------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 79 v~~~~~~~~~~~-------------~~~~~~~~l~~aa~~~~ 107 (312)
||.+++...... .|....+.+++.+.+..
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~ 123 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC 123 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999996543211 34455677788777765
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0028 Score=53.27 Aligned_cols=92 Identities=20% Similarity=0.311 Sum_probs=62.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhcc-----CCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKE-----QGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~l~~~~~ 74 (312)
++||.|+|| |.+|..++..|+..+. +|..++++ .++.+- ...+.+ .++.+.. | + .++++
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~-----~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~ 75 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIF-----KDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAK 75 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCC-----chHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhC
Confidence 479999997 9999999999988874 89999886 555532 222322 2333332 2 2 34488
Q ss_pred cCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
++|+|+.+++...... .|....+.+++.+.+..
T Consensus 76 ~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~ 116 (326)
T 2zqz_A 76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG 116 (326)
T ss_dssp GCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999998754321 45667788888888776
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00051 Score=49.98 Aligned_cols=83 Identities=24% Similarity=0.356 Sum_probs=55.9
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGT---GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|+|+|++ |.+|..+++.|++.|++|+.+.++.. .+ .++.. ..++.++.+.+|++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~-----------~i--~G~~~-------~~s~~el~~~vDlv 73 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD-----------EI--EGLKC-------YRSVRELPKDVDVI 73 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----------EE--TTEEC-------BSSGGGSCTTCCEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCC-----------eE--CCeee-------cCCHHHhCCCCCEE
Confidence 5789999987 89999999999999999777655411 01 12221 11233334479999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+.+. .....+++.|.+.| ++.++.
T Consensus 74 ii~vp~--------~~v~~v~~~~~~~g-~~~i~~ 99 (138)
T 1y81_A 74 VFVVPP--------KVGLQVAKEAVEAG-FKKLWF 99 (138)
T ss_dssp EECSCH--------HHHHHHHHHHHHTT-CCEEEE
T ss_pred EEEeCH--------HHHHHHHHHHHHcC-CCEEEE
Confidence 988763 23556666677778 777665
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00079 Score=57.77 Aligned_cols=74 Identities=28% Similarity=0.292 Sum_probs=55.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+|+|+|+ |.+|...++.+...|.+|++++++ +++.+... ...++..+ .|..+.+.+.++..++|+||.++
T Consensus 189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~--~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~ 259 (366)
T 1yqd_A 189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTS-----PSKKEEAL--KNFGADSF-LVSRDQEQMQAAAGTLDGIIDTV 259 (366)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----GGGHHHHH--HTSCCSEE-EETTCHHHHHHTTTCEEEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHH--HhcCCceE-EeccCHHHHHHhhCCCCEEEECC
Confidence 58999995 999999999999999999999987 54543322 12344332 46677777777777899999999
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
+..
T Consensus 260 g~~ 262 (366)
T 1yqd_A 260 SAV 262 (366)
T ss_dssp SSC
T ss_pred CcH
Confidence 864
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00064 Score=59.09 Aligned_cols=71 Identities=30% Similarity=0.506 Sum_probs=53.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+|+ |.+|+.+++.|...|. +|+++.|+ +++.+ ..+.+ +++.+ ++ +++.+.+.++|+||
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~-----~~ra~~la~~~---g~~~~--~~---~~l~~~l~~aDvVi 232 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELARDL---GGEAV--RF---DELVDHLARSDVVV 232 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHHHH---TCEEC--CG---GGHHHHHHTCSEEE
T ss_pred CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHc---CCcee--cH---HhHHHHhcCCCEEE
Confidence 478999995 9999999999999997 99999998 66652 32333 33322 22 35666778999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+++...
T Consensus 233 ~at~~~~ 239 (404)
T 1gpj_A 233 SATAAPH 239 (404)
T ss_dssp ECCSSSS
T ss_pred EccCCCC
Confidence 9987554
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00081 Score=57.11 Aligned_cols=75 Identities=20% Similarity=0.345 Sum_probs=53.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCC-HHHHHHHhc--cCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFND-YQSLVNAVK--LVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d-~~~l~~~~~--~~d~ 78 (312)
..+|+|+||+|.+|...++.+...|.+|++++++ +++.+.++.+ ++. ++..+ .+ .+.+.+... ++|+
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---ga~~v~~~~-~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR-----TAATEFVKSV---GADIVLPLE-EGWAKAVREATGGAGVDM 230 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEEEESS-TTHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhc---CCcEEecCc-hhHHHHHHHHhCCCCceE
Confidence 3689999999999999999999999999999998 5566554544 333 33333 23 234444443 6999
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
||++++..
T Consensus 231 vid~~g~~ 238 (342)
T 4eye_A 231 VVDPIGGP 238 (342)
T ss_dssp EEESCC--
T ss_pred EEECCchh
Confidence 99999863
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00021 Score=59.20 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=47.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|.|+| .|.+|..++..|.+ |++|++++|+ +++.+.+.. .++... + +.++++++|+||.+
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~-----~~~~~~~~~---~g~~~~--~------~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRT-----FEKALRHQE---EFGSEA--V------PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSS-----THHHHHHHH---HHCCEE--C------CGGGGGGCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCC-----HHHHHHHHH---CCCccc--C------HHHHHhCCCEEEEe
Confidence 36899999 79999999999999 9999999988 555533322 133322 1 23456789999998
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
....
T Consensus 63 v~~~ 66 (289)
T 2cvz_A 63 LPTT 66 (289)
T ss_dssp CSSH
T ss_pred CCCh
Confidence 8753
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0012 Score=56.59 Aligned_cols=73 Identities=23% Similarity=0.206 Sum_probs=52.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHh-ccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAV-KLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~-~~~d~v 79 (312)
.+|+|+||+|.+|..+++.+...|.+|++++|+ +++.+.++.+ ++..+ .|..+. +.+.+.. .++|+|
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~-----~~~~~~~~~~---Ga~~~-~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS-----DEKSAFLKSL---GCDRP-INYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHc---CCcEE-EecCChhHHHHHHHhcCCCCCEE
Confidence 589999999999999999999999999999998 7777555443 44332 243332 2333322 269999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
|++++.
T Consensus 236 id~~g~ 241 (362)
T 2c0c_A 236 YESVGG 241 (362)
T ss_dssp EECSCT
T ss_pred EECCCH
Confidence 999874
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.024 Score=46.71 Aligned_cols=86 Identities=21% Similarity=0.223 Sum_probs=57.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.++|+|.|+||.+|+.+++.|.+.|+++++........ + ...++.+ +.+ +.++.+ ++|+++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g--------~--~~~G~~v----y~s---l~el~~~~~~D~vi 69 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGG--------T--THLGLPV----FNT---VREAVAATGATASV 69 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT--------C--EETTEEE----ESS---HHHHHHHHCCCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccc--------c--eeCCeec----cCC---HHHHhhcCCCCEEE
Confidence 46899999999999999999999898865444331100 0 0112222 223 344444 799999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.+.. ....+++.|.++| ++.+|.
T Consensus 70 I~tP~~--------~~~~~~~ea~~~G-i~~iVi 94 (288)
T 2nu8_A 70 IYVPAP--------FCKDSILEAIDAG-IKLIIT 94 (288)
T ss_dssp ECCCGG--------GHHHHHHHHHHTT-CSEEEE
T ss_pred EecCHH--------HHHHHHHHHHHCC-CCEEEE
Confidence 988754 3667888888899 776553
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00064 Score=57.28 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=51.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEE---EEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETY---VLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+|+|.||+|.+|+.+++.|.+++|++. .+....... +.+.-.+..+...+. +++ . + ++|+||
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g--------~~l~~~g~~i~v~~~-~~~---~-~-~~DvV~ 66 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAG--------VRLAFRGEEIPVEPL-PEG---P-L-PVDLVL 66 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSS--------CEEEETTEEEEEEEC-CSS---C-C-CCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCC--------CEEEEcCceEEEEeC-Chh---h-c-CCCEEE
Confidence 4799999999999999999997776433 332110000 111111112212222 222 2 4 899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
.|++.. .....+....+.| ++.+-.|
T Consensus 67 ~a~g~~--------~s~~~a~~~~~~G-~~vId~s 92 (331)
T 2yv3_A 67 ASAGGG--------ISRAKALVWAEGG-ALVVDNS 92 (331)
T ss_dssp ECSHHH--------HHHHHHHHHHHTT-CEEEECS
T ss_pred ECCCcc--------chHHHHHHHHHCC-CEEEECC
Confidence 998743 3445666667778 6544444
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00031 Score=57.30 Aligned_cols=67 Identities=19% Similarity=0.154 Sum_probs=47.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|.|+| .|.+|..++..|.+.|++|++.+|..+ +++.+. +...++. .+ ..++++++|+||.+.
T Consensus 1 M~I~iIG-~G~mG~~la~~l~~~g~~V~~~~~~~~---~~~~~~---~~~~g~~------~~---~~~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRS---PSTIER---ARTVGVT------ET---SEEDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCC---HHHHHH---HHHHTCE------EC---CHHHHHTSSEEEECS
T ss_pred CeEEEEe-chHHHHHHHHHHHHCCCeEEEeCCccC---HHHHHH---HHHCCCc------CC---HHHHHhcCCEEEEEC
Confidence 4899999 899999999999999999998766211 444432 2222443 12 334567899999998
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
...
T Consensus 65 ~~~ 67 (264)
T 1i36_A 65 TPG 67 (264)
T ss_dssp CGG
T ss_pred CCH
Confidence 764
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0057 Score=53.05 Aligned_cols=71 Identities=20% Similarity=0.194 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
.+++|||+| .|.++..+++.+.+.|+++++++...... + .. . + --+.+..|+.|.+.+.++.+ ++|.|
T Consensus 6 ~~~~ilI~g-~g~~~~~~~~a~~~~G~~~v~v~~~~~~~-~-~~---~-~---ad~~~~~~~~d~~~l~~~~~~~~~d~v 75 (403)
T 4dim_A 6 DNKRLLILG-AGRGQLGLYKAAKELGIHTIAGTMPNAHK-P-CL---N-L---ADEISYMDISNPDEVEQKVKDLNLDGA 75 (403)
T ss_dssp CCCEEEEEC-CCGGGHHHHHHHHHHTCEEEEEECSSCCH-H-HH---H-H---CSEEEECCTTCHHHHHHHTTTSCCSEE
T ss_pred CCCEEEEEC-CcHhHHHHHHHHHHCCCEEEEEcCCCCCC-c-ch---h-h---CCeEEEecCCCHHHHHHHHHHcCCCEE
Confidence 468999999 56679999999999999999997532111 1 11 1 1 22567788999999999877 58988
Q ss_pred EEc
Q 021470 80 ICA 82 (312)
Q Consensus 80 ~~~ 82 (312)
+..
T Consensus 76 ~~~ 78 (403)
T 4dim_A 76 ATC 78 (403)
T ss_dssp ECC
T ss_pred EeC
Confidence 753
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0023 Score=53.51 Aligned_cols=92 Identities=24% Similarity=0.369 Sum_probs=62.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhh-hhc------cCCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLL-SFK------EQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~l~------~~~~~~v~~D~~d~~~l~~~~ 73 (312)
||+|+|+| +|.+|..++..|.+.| ++|++++|+ +++.+... .+. ...+.+... |. +++
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~ 67 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDAN-----EAKVKADQIDFQDAMANLEAHGNIVIN---DW----AAL 67 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGG
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCC-----HHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHh
Confidence 36999999 8999999999999999 899999998 55553221 121 112333222 32 357
Q ss_pred ccCCEEEEcCCCCcc----c--------cchhHhHHHHHHHHHHhC
Q 021470 74 KLVDVVICAISGVHI----R--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~----~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+++|+||.+++.... . ..|....+.+++.+.+..
T Consensus 68 ~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~ 113 (309)
T 1hyh_A 68 ADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG 113 (309)
T ss_dssp TTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 899999999986542 1 134555667777776654
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00023 Score=58.00 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=47.9
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|++|+|.|+| .|.+|..++..|.+.| ++|++++|+.. + .++.. ..+ ..++++++
T Consensus 2 m~~m~i~iiG-~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~-----~---------~g~~~----~~~---~~~~~~~~ 59 (262)
T 2rcy_A 2 MENIKLGFMG-LGQMGSALAHGIANANIIKKENLFYYGPSKK-----N---------TTLNY----MSS---NEELARHC 59 (262)
T ss_dssp CSSSCEEEEC-CSHHHHHHHHHHHHHTSSCGGGEEEECSSCC-----S---------SSSEE----CSC---HHHHHHHC
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc-----c---------CceEE----eCC---HHHHHhcC
Confidence 6778999999 6999999999999999 79999988732 1 13322 123 33455689
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|+||.+....
T Consensus 60 D~vi~~v~~~ 69 (262)
T 2rcy_A 60 DIIVCAVKPD 69 (262)
T ss_dssp SEEEECSCTT
T ss_pred CEEEEEeCHH
Confidence 9999998743
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0011 Score=58.04 Aligned_cols=68 Identities=18% Similarity=0.274 Sum_probs=53.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| .|.+|+.+++++.+.|++|++++..... +... + .-+.+..|+.|.+.+.++.+++|+|+.
T Consensus 35 ~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~--p~~~-----~---ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 35 GAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPAS--PAGA-----V---ADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTC--HHHH-----H---SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcC--chhh-----h---CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 46899999 7999999999999999999999765332 2111 1 224667899999999999999999984
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00058 Score=58.20 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=55.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC------------------C
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF------------------N 64 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~------------------~ 64 (312)
..+|+|+| .|.+|..+++.+...|.+|++++|+ +++.+.++. .+.+++..|. .
T Consensus 184 ~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~-----~~~l~~~~~---lGa~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 184 PASALVLG-VGVAGLQALATAKRLGAKTTGYDVR-----PEVAEQVRS---VGAQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSS-----GGGHHHHHH---TTCEECCCC-------------CHHHHHH
T ss_pred CCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHH---cCCeEEeccccccccccchhhhhHHHHhh
Confidence 36899999 5999999999999999999999998 655544333 3555554321 1
Q ss_pred CHHHHHHHhccCCEEEEcCCC
Q 021470 65 DYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~ 85 (312)
+.+.+.++++++|+||.++..
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCC
T ss_pred hHHHHHHHHhcCCEEEECCCC
Confidence 245777888899999988644
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00067 Score=58.96 Aligned_cols=73 Identities=21% Similarity=0.177 Sum_probs=48.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE-----------ccCCCHHHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS-----------GSFNDYQSLVNA 72 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~-----------~D~~d~~~l~~~ 72 (312)
|+|.|+| .|++|..++..|.+ |++|++++|+ +++.+.+ ...+..+.. +.+.-..+..++
T Consensus 1 MkI~VIG-~G~vG~~~A~~La~-G~~V~~~d~~-----~~~~~~l---~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 1 MKIAVAG-SGYVGLSLGVLLSL-QNEVTIVDIL-----PSKVDKI---NNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTT-TSEEEEECSC-----HHHHHHH---HTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHhC-CCEEEEEECC-----HHHHHHH---HcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 4899999 69999999999999 9999999998 6666433 222221100 000000123345
Q ss_pred hccCCEEEEcCCCC
Q 021470 73 VKLVDVVICAISGV 86 (312)
Q Consensus 73 ~~~~d~v~~~~~~~ 86 (312)
++++|+||.+.+..
T Consensus 71 ~~~aDvviiavpt~ 84 (402)
T 1dlj_A 71 YKEAELVIIATPTN 84 (402)
T ss_dssp HHHCSEEEECCCCC
T ss_pred hcCCCEEEEecCCC
Confidence 66899999998775
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00064 Score=58.35 Aligned_cols=75 Identities=23% Similarity=0.282 Sum_probs=53.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC--HHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND--YQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d--~~~l~~~~~~~d~v~ 80 (312)
..+|+|+|| |.+|..+++.+...|.+|++++|+... .++.+.++.+ ++..+ | .+ .+.+.+.-.++|+||
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~--~~~~~~~~~~---ga~~v--~-~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPT--EVEQTVIEET---KTNYY--N-SSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCC--HHHHHHHHHH---TCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccc--hHHHHHHHHh---CCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence 568999999 999999999999999999999998210 1566444433 55555 5 44 123333114799999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
++++..
T Consensus 252 d~~g~~ 257 (366)
T 2cdc_A 252 DATGAD 257 (366)
T ss_dssp ECCCCC
T ss_pred ECCCCh
Confidence 999864
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0037 Score=52.34 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=63.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHH-hhhhcc-----CCCeEEE-ccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQM-LLSFKE-----QGAKLVS-GSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~~l~~-----~~~~~v~-~D~~d~~~l~~~~ 73 (312)
.++|.|+|+ |.+|..++..|+..|. +|.+++++ .++.+- ...+.+ ....++. .|+. .+
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~-----~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~ 87 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVM-----EDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VS 87 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSC-----HHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECC-----HHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------Hh
Confidence 479999997 9999999999999985 89999887 544421 111111 1223332 2332 27
Q ss_pred ccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 74 KLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+++|+||.+++..... ..|....+.+++.+.+.+
T Consensus 88 ~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~ 129 (330)
T 3ldh_A 88 AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS 129 (330)
T ss_dssp SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC
Confidence 8999999999875422 256677888888888875
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0028 Score=57.74 Aligned_cols=89 Identities=19% Similarity=0.140 Sum_probs=0.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++++|+| .|.+|+.+++.|.+.|++|+++.+++... ..-..++.+|.+|++.++++ ++++|.++-+
T Consensus 349 ~~viIiG-~G~~G~~la~~L~~~g~~v~vid~d~~~~------------~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~ 415 (565)
T 4gx0_A 349 ELIFIIG-HGRIGCAAAAFLDRKPVPFILIDRQESPV------------CNDHVVVYGDATVGQTLRQAGIDRASGIIVT 415 (565)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSCCSS------------CCSSCEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHCCCCEEEEECChHHH------------hhcCCEEEeCCCCHHHHHhcCccccCEEEEE
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCc-eee
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVK-RFL 113 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~-~~v 113 (312)
.+. -.....+...|++.+ .+ ++|
T Consensus 416 ~~~-------d~~ni~~~~~ak~l~-~~~~ii 439 (565)
T 4gx0_A 416 TND-------DSTNIFLTLACRHLH-SHIRIV 439 (565)
T ss_dssp CSC-------HHHHHHHHHHHHHHC-SSSEEE
T ss_pred CCC-------chHHHHHHHHHHHHC-CCCEEE
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0025 Score=54.11 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=50.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|...|.+|++++|+ +... .....+++.+ +++.++++.+|+|+.+
T Consensus 160 g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~-----~~~~----~~~~~g~~~~-------~~l~ell~~aDiV~l~ 222 (352)
T 3gg9_A 160 GQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRE-----NSKE----RARADGFAVA-------ESKDALFEQSDVLSVH 222 (352)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSH-----HHHH----HHHHTTCEEC-------SSHHHHHHHCSEEEEC
T ss_pred CCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCC-----CCHH----HHHhcCceEe-------CCHHHHHhhCCEEEEe
Confidence 47999999 8999999999999999999999886 3221 1123355321 2466677889999988
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 223 ~Plt~ 227 (352)
T 3gg9_A 223 LRLND 227 (352)
T ss_dssp CCCST
T ss_pred ccCcH
Confidence 87543
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00097 Score=54.48 Aligned_cols=71 Identities=21% Similarity=0.331 Sum_probs=49.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++++|+|+ |.+|+.++..|.+.| .+|+++.|+ +++++.+ +.+...++..+ ++.+ +.. .++|+||
T Consensus 120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~-----~~~a~~la~~~~~~~~~~~--~~~~---l~~--~~~DivI 186 (272)
T 3pwz_A 120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRD-----MAKALALRNELDHSRLRIS--RYEA---LEG--QSFDIVV 186 (272)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSC-----HHHHHHHHHHHCCTTEEEE--CSGG---GTT--CCCSEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCC-----HHHHHHHHHHhccCCeeEe--eHHH---hcc--cCCCEEE
Confidence 478999995 889999999999999 599999998 7776543 22322122222 3322 221 6799999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
++.+..
T Consensus 187 naTp~g 192 (272)
T 3pwz_A 187 NATSAS 192 (272)
T ss_dssp ECSSGG
T ss_pred ECCCCC
Confidence 998753
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00075 Score=55.43 Aligned_cols=70 Identities=24% Similarity=0.304 Sum_probs=49.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHh-hhhccC-CCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQML-LSFKEQ-GAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~l~~~-~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++++|+|+ |.+|+.++..|.+.|. +|+++.|+ +++++.+ +.+... .+..+ ++.+ + ..++|+|
T Consensus 126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~-----~~~a~~la~~~~~~~~~~~~--~~~~---l---~~~aDiI 191 (281)
T 3o8q_A 126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRT-----FAKAEQLAELVAAYGEVKAQ--AFEQ---L---KQSYDVI 191 (281)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESS-----HHHHHHHHHHHGGGSCEEEE--EGGG---C---CSCEEEE
T ss_pred CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECC-----HHHHHHHHHHhhccCCeeEe--eHHH---h---cCCCCEE
Confidence 478999995 8899999999999995 99999998 7776433 223221 23333 2222 1 1579999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|++.+..
T Consensus 192 InaTp~g 198 (281)
T 3o8q_A 192 INSTSAS 198 (281)
T ss_dssp EECSCCC
T ss_pred EEcCcCC
Confidence 9998754
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0011 Score=56.17 Aligned_cols=71 Identities=25% Similarity=0.346 Sum_probs=48.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEE------cc--C-CCHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS------GS--F-NDYQSLVN 71 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~------~D--~-~d~~~l~~ 71 (312)
|++|+|+|+| .|.+|..++..|.+.|++|++++|+ + +. +.+...++.+.. .. . .+.+.
T Consensus 1 M~~mkI~IiG-aG~~G~~~a~~L~~~g~~V~~~~r~-----~-~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 67 (335)
T 3ghy_A 1 MSLTRICIVG-AGAVGGYLGARLALAGEAINVLARG-----A-TL---QALQTAGLRLTEDGATHTLPVRATHDAAA--- 67 (335)
T ss_dssp -CCCCEEEES-CCHHHHHHHHHHHHTTCCEEEECCH-----H-HH---HHHHHTCEEEEETTEEEEECCEEESCHHH---
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEECh-----H-HH---HHHHHCCCEEecCCCeEEEeeeEECCHHH---
Confidence 7788999999 7999999999999999999999985 2 22 222233333221 11 1 24332
Q ss_pred HhccCCEEEEcCCC
Q 021470 72 AVKLVDVVICAISG 85 (312)
Q Consensus 72 ~~~~~d~v~~~~~~ 85 (312)
+.++|+||.+...
T Consensus 68 -~~~~D~Vilavk~ 80 (335)
T 3ghy_A 68 -LGEQDVVIVAVKA 80 (335)
T ss_dssp -HCCCSEEEECCCH
T ss_pred -cCCCCEEEEeCCc
Confidence 4789999988764
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0024 Score=54.59 Aligned_cols=76 Identities=12% Similarity=0.012 Sum_probs=56.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh----c--cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV----K--LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~----~--~~ 76 (312)
.+|||+|+ |.+|...++.+...|.+ |++++++ ++|.+.++.+ ...+.....|-.+.+++.+.+ . ++
T Consensus 181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~-----~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~ 253 (363)
T 3m6i_A 181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDID-----EGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEP 253 (363)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESC-----HHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC-----HHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCC
Confidence 58999997 99999999999899976 8888888 8888777777 444444444444444444433 2 69
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|+||.+++..
T Consensus 254 Dvvid~~g~~ 263 (363)
T 3m6i_A 254 AVALECTGVE 263 (363)
T ss_dssp SEEEECSCCH
T ss_pred CEEEECCCCh
Confidence 9999998853
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00054 Score=58.15 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=52.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|...++.+...|.+|++++++ +++.+.++.+ ++..+ .|..+ .+.+.+... ++|
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~l---ga~~~-~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN-----NKHTEELLRL---GAAYV-IDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhC---CCcEE-EeCCcccHHHHHHHHhCCCCCc
Confidence 3689999999999999999998899999999998 4444444443 33322 24433 234444433 699
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+||++++..
T Consensus 216 vvid~~g~~ 224 (340)
T 3gms_A 216 AAIDSIGGP 224 (340)
T ss_dssp EEEESSCHH
T ss_pred EEEECCCCh
Confidence 999998854
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0011 Score=54.48 Aligned_cols=70 Identities=19% Similarity=0.251 Sum_probs=49.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v 79 (312)
|++|.|+| .|.+|..++..|.+.|+ +|++++|+ +++.+... ..++.... ..+ +.++++ ++|+|
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~-----~~~~~~~~---~~g~~~~~--~~~---~~~~~~~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAV---DLGIIDEG--TTS---IAKVEDFSPDFV 66 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHH---HTTSCSEE--ESC---GGGGGGTCCSEE
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCC-----HHHHHHHH---HCCCcccc--cCC---HHHHhcCCCCEE
Confidence 46899999 89999999999999998 89999887 66654332 22332100 112 234577 89999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|.+....
T Consensus 67 ilavp~~ 73 (281)
T 2g5c_A 67 MLSSPVR 73 (281)
T ss_dssp EECSCHH
T ss_pred EEcCCHH
Confidence 9998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 312 | ||||
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 6e-63 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 7e-58 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 6e-25 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 1e-16 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 1e-09 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-07 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 6e-07 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 2e-06 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 5e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 8e-06 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 1e-05 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-05 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 2e-05 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-05 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 3e-05 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-05 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 5e-05 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 9e-05 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 9e-05 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 1e-04 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 1e-04 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-04 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-04 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 3e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 5e-04 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 0.001 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 199 bits (507), Expect = 6e-63
Identities = 171/312 (54%), Positives = 232/312 (74%), Gaps = 2/312 (0%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+KS+VLI+GGTGY+GKR+V AS++LGH TYVL RPE+ +I+KVQMLL FK+ GAKL+
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA 61
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
S +D+Q + V+ + + SH IL QLKLV+AIKEAGN+KRFLPSEFG DP
Sbjct: 62 SLDDHQR-LVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 120
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQ-PGSILPSKDS 180
M +A++PG +TF DK VR+AIE A IP+TYVS+N FAGYF G L Q G ++P +D
Sbjct: 121 DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDK 180
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240
V++ GDGN K I+VDEDD+ YT+K+I+DP+TLN+TMY+RPP NILSQ+EV++ WE+L
Sbjct: 181 VLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE 240
Query: 241 KTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIK 300
+ L K IS ++FLA MK+++Y ++ H Y + + G L NFEIG +EA++LYPE+K
Sbjct: 241 QNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVK 300
Query: 301 YTTVEEYLRRYL 312
Y T++ YL RY+
Sbjct: 301 YVTMDSYLERYV 312
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 186 bits (472), Expect = 7e-58
Identities = 155/311 (49%), Positives = 210/311 (67%), Gaps = 7/311 (2%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-DIEKVQMLLSFKEQGAKLVSG 61
+S++L+IG TGY+G+ + KASL LGH T++L R + EK Q+L SFK GA +V G
Sbjct: 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 62
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
S +D+ SLV AVK VDVVI + S QI Q+ ++ AIKE G VKRF PSEFG D
Sbjct: 63 SIDDHASLVEAVKNVDVVIS-----TVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV 117
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
+ +EP + F+ K VR+AIE GIP+TYVS+NCFAGYFL L Q G P +D V
Sbjct: 118 DNVHA-VEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKV 176
Query: 182 VLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
V+LGDGN + ++V E+DI +T+KA++DPRTLN+T+YLR P N LS E+V WEK I K
Sbjct: 177 VILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK 236
Query: 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKY 301
TL+K+ + +EE L + + + + + + + +G TNFEIG GVEASQLYP++KY
Sbjct: 237 TLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKY 296
Query: 302 TTVEEYLRRYL 312
TTV+EYL ++
Sbjct: 297 TTVDEYLSNFV 307
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 100 bits (249), Expect = 6e-25
Identities = 40/264 (15%), Positives = 83/264 (31%), Gaps = 17/264 (6%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
+K + ++G TG G L++ + A+GH ++ + L G
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQG 56
Query: 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDP 121
+ L++ + + + +I + L DA K AG ++ ++ S
Sbjct: 57 PLLNNVPLMDTLFEGAHLAFINTTSQAG-DEIAIGKDLADAAKRAGTIQHYIYSSMPDH- 114
Query: 122 AKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSV 181
P + K V + G+P T+V A + F + D
Sbjct: 115 --SLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGT 172
Query: 182 VLL----GDGNPKAIYVDEDDIAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETW 235
P E D+ ++ D + + L LS +V +
Sbjct: 173 FEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE--TLSPVQVCAAF 230
Query: 236 EKLIGKTLQKSSISKEEFLASMKE 259
+ + + + + K E ++
Sbjct: 231 SRALNRRVTYVQVPKVEIKVNIPV 254
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.1 bits (183), Expect = 1e-16
Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 18/219 (8%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS 60
M K+ I G TG G + ++ G+E VL R D ++
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-----DSSRLPSEGPRPAHVVVGDV 55
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTD 120
D V V V++ + + + +V A+K G V + +
Sbjct: 56 LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFL 114
Query: 121 PAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS 180
+ DD + + K + ++G+ + V L G +
Sbjct: 115 LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG------------A 162
Query: 181 VVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYL 219
+ DG + + + D+ + ++ + + Y
Sbjct: 163 YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 55.6 bits (132), Expect = 1e-09
Identities = 30/253 (11%), Positives = 65/253 (25%), Gaps = 24/253 (9%)
Query: 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND 65
VL+ G +G G+ + K + + + A + G D
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKFVA-------KGLVRSAQGKEKIGGEADVFIGDITD 58
Query: 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMA 125
S+ A + +D ++ S V G A
Sbjct: 59 ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA 118
Query: 126 NAM---------EPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILP 176
+ T D + + + + + + G +L
Sbjct: 119 AKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLD 178
Query: 177 SKDSVVLLGDGNPKAI------YVDEDDIAMYTMKAINDPRTLNRTMYL--RPPKNILSQ 228
+ V L G + V D+A ++A+ N+ L +P
Sbjct: 179 KEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPT 238
Query: 229 REVVETWEKLIGK 241
++ + ++ +
Sbjct: 239 KDFKALFSQVTSR 251
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 39/273 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-----IEKVQMLLSFKEQGAKLV 59
++L+ GG G++G V+ LA + I +D + + + + V
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEV-IVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 60 SGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQ----------ILLQLKLVDAIKEAGNV 109
G D L ++ VD ++ + H+ + L+ +AG
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 110 KRFLPS------EFGTDPAKMANAMEP----GRVTFDDKMVVRKAIEDAGIPFTYVSANC 159
+ S + ++ +EP +V R G+ C
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLD--VRITRC 178
Query: 160 FAGYFLGGLCQPGSILP-------SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212
Y G P ++P ++ L GDG +V DD + R
Sbjct: 179 CNNY--GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA 236
Query: 213 LNRTMYLRPPKNILSQREVVETWEKLIGKTLQK 245
Y L+ RE+ +G
Sbjct: 237 GEI--YHIGGGLELTNRELTGILLDSLGADWSS 267
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 49.4 bits (117), Expect = 2e-07
Identities = 45/274 (16%), Positives = 79/274 (28%), Gaps = 42/274 (15%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ---GAKLVSG 61
LI G TG G L + L G+E + + R + E+V + L G
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 62 SFNDYQSLVNAVKL--VDVVICAISGVHIRSHQ----------ILLQLKLVDAIKEAG-- 107
+D +L ++ D V + H+ + L+L++AI+ G
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122
Query: 108 NVKRFL----PSEFG---TDPAKMANAMEP----GRVTFDDKMVVRKAIEDAGIPFTYVS 156
RF +G P K P + E G+ +
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY--ACN 180
Query: 157 ANCFAGY-------FLGGLCQPG--SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207
F F+ +I +S + LG+ + + D +
Sbjct: 181 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240
Query: 208 NDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241
+ + S R+ VE +G
Sbjct: 241 QQEQ--PEDFVIATGVQY-SVRQFVEMAAAQLGI 271
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 6e-07
Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 45/239 (18%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
+ ++LI GG G++G L + GHE V+ G V+ + +
Sbjct: 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTG-RKRNVEHWIGHEN-------FE 52
Query: 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQ----------ILLQLKLVDAIKEAGNVKRF 112
++ + VD + S ++ + L ++ K G R
Sbjct: 53 LINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARL 110
Query: 113 L---PSEFGTDPAKM---------ANAMEPGRVTFDDKMV----VRKAIEDAGIPFTYVS 156
L SE DP N + P + K V ++ G+
Sbjct: 111 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE--VRV 168
Query: 157 ANCFAGYFLGGLCQPGSILP-------SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208
A F + G ++ + + + G G+ + D+ + +N
Sbjct: 169 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN 227
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 46.6 bits (109), Expect = 2e-06
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 4/87 (4%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
K+LI GG G+LG L +L+ G + V + + L S + V G
Sbjct: 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIR 59
Query: 65 DYQSLVNAVKLV--DVVICAISGVHIR 89
+ + + D V +
Sbjct: 60 NKNDVTRLITKYMPDSCFHLAGQVAMT 86
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 45.2 bits (105), Expect = 5e-06
Identities = 11/68 (16%), Positives = 24/68 (35%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
E S VL+ G G++ +V+ L G++ R + + + + + V
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69
Query: 62 SFNDYQSL 69
+
Sbjct: 70 DMLKQGAY 77
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.6 bits (104), Expect = 8e-06
Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 30/272 (11%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG--VDIEKVQMLLSFKEQ-GAK 57
+ LI G G++G L++ L L + L G ++++V+ L+S K+ K
Sbjct: 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73
Query: 58 LVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQ----------ILLQLKLVDAIKEAG 107
+ G + NA VD V+ + + I L ++ A ++A
Sbjct: 74 FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK 133
Query: 108 NVKRFLPS------EFGTDPAKMANAMEP----GRVTFDDKMVVRKAIEDAGIPFTYVSA 157
+ + P +P + +++ G +
Sbjct: 134 VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRY 193
Query: 158 NCFAGYFLGGLCQPGSILP-------SKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210
G +++P D V + GDG + ++ + A
Sbjct: 194 FNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 253
Query: 211 RTLNRTMYLRPPKNILSQREVVETWEKLIGKT 242
+Y S ++ + +
Sbjct: 254 LDARNQVYNIAVGGRTSLNQLFFALRDGLAEN 285
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.9 bits (102), Expect = 1e-05
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Query: 4 SK-VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS 62
SK VL+ GG GY+G V + G++ V + V L +
Sbjct: 1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNS-TYDSVARLEVLTKHHIPFYEVD 59
Query: 63 FNDYQSLVNAVKL--VDVVICAISGVHIRSHQ 92
D + L K +D VI +
Sbjct: 60 LCDRKGLEKVFKEYKIDSVIHFAGLKAVGEST 91
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (99), Expect = 2e-05
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQML 48
M+ V I+G +G G+ L+K L G + ++ R ++ D E + +
Sbjct: 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV 61
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.1 bits (100), Expect = 2e-05
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE----QGAKL 58
+ LI G TG G L + L G+E + L R + +++ + KL
Sbjct: 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL 60
Query: 59 VSGSFNDYQSLVNAVK 74
D SL +
Sbjct: 61 HYADLTDASSLRRWID 76
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
+VL+ GG+GY+G L GH+ +L + ++ + V G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR-SVLPVIERLGGKHPTFVEGDIR 60
Query: 65 DYQSLVNAVKL--VDVVI--CAISGVH 87
+ + + +D VI + V
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVG 87
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 42.5 bits (98), Expect = 3e-05
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV-DIEKVQMLLS 50
K+LI G G LG+ + K E ++ + ++ V +
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFN 49
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 42.0 bits (98), Expect = 4e-05
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYV-LHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63
K+LI GG G++G +V+ + +T V + + ++E + +
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESN--RYNFEHADI 59
Query: 64 NDYQSLVNAVKL--VDVVI--CAISGVH 87
D + + D V+ A S V
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVD 87
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 41.9 bits (96), Expect = 5e-05
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYV-LHRPEIGVDI 42
+L+ G TG +G L ++ +G+ + +H E D
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDF 40
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (94), Expect = 9e-05
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
+VLI+G G++G L + L H G+DI + V G +
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEV------YGLDIGSDAISRFLNHPHFHFVEGDIS 55
Query: 65 DYQSLVNAVK 74
+ +
Sbjct: 56 IHSEWIEYHV 65
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 41.1 bits (95), Expect = 9e-05
Identities = 11/80 (13%), Positives = 23/80 (28%), Gaps = 8/80 (10%)
Query: 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG 61
E K+ I G G++ + + GH + E + +
Sbjct: 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM--------FCDEFHLV 65
Query: 62 SFNDYQSLVNAVKLVDVVIC 81
++ + + VD V
Sbjct: 66 DLRVMENCLKVTEGVDHVFN 85
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.7 bits (93), Expect = 1e-04
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 15/103 (14%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVL---------------HRPEIGVDIEKVQMLL 49
+V++IGG GY G +E ++ I +++
Sbjct: 3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62
Query: 50 SFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISGVHIRSHQ 92
+ + +L G D++ L + K + G +
Sbjct: 63 ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPY 105
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.1 bits (92), Expect = 1e-04
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHR 35
+VL+ G TG G+ L+ L+ V+
Sbjct: 4 RVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN 64
L+ G TG G L K L G+ + L +++ L E + G
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL--GIEGDIQYEDGDMA 59
Query: 65 DYQSLVN 71
D S+
Sbjct: 60 DACSVQR 66
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 3e-04
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVL 33
M + KVL+ GG GY+G V L G+ V+
Sbjct: 1 MAE-KVLVTGGAGYIGSHTVLELLEAGYLPVVI 32
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 39.5 bits (91), Expect = 3e-04
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL 33
K +V I G G +G + + G VL
Sbjct: 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVL 32
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 39.1 bits (89), Expect = 5e-04
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD 41
+V + G TG+ G L +G V
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP 46
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.8 bits (89), Expect = 6e-04
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 9/89 (10%)
Query: 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD----IEKVQMLLSFKEQGAKLVS 60
+++ GG G++G V + +V +D L + +LV
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHV-----TVLDKLTYAGNKANLEAILGDRVELVV 58
Query: 61 GSFNDYQSLVNAVKLVDVVICAISGVHIR 89
G D + + D ++ + H
Sbjct: 59 GDIADAELVDKLAAKADAIVHYAAESHND 87
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.6 bits (86), Expect = 0.001
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL----SFKEQGAKL 58
++ LI G TG G L + L G+E + + R + +++ L + E KL
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60
Query: 59 VSGSFNDYQSLVNAVKLVD----VVICAISGVHIRSHQ--------ILLQLKLVDAIKEA 106
G D LV + V + A S V I + L+L+DA+K
Sbjct: 61 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120
Query: 107 G--NVKRFL 113
G N +F
Sbjct: 121 GLINSVKFY 129
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 312 | |||
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 100.0 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 100.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.97 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.95 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.95 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.93 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.9 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.9 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.88 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.72 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.67 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.67 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.67 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.66 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.66 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.65 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.65 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.65 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.65 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.64 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.63 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.63 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.63 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.62 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.61 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.61 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.61 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.6 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.6 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.6 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.6 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.6 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.59 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.59 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.59 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.58 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.58 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.58 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.57 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.57 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.56 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.56 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.56 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.56 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.56 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.55 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.55 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.55 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.54 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.53 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.52 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.52 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.52 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.51 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.5 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.5 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.49 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.48 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.45 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.44 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.39 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.39 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.34 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.31 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.28 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.27 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.25 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.25 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.24 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.23 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.21 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.21 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.2 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.12 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.0 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.99 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.82 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.62 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.54 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.53 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.52 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.34 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 98.32 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.31 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.28 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.24 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.12 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.07 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.07 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 98.06 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.04 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.04 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.02 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 98.0 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.0 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.0 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.98 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.97 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.94 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.93 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.93 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.9 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.89 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.87 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.86 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.86 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.86 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.82 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.82 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.81 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.79 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.78 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.77 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.77 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.77 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.77 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.76 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.76 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.75 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.72 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.72 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.72 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.72 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.7 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.69 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.64 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 97.64 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.63 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.62 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.58 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.57 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.57 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.56 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.55 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.52 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.46 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 97.46 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.46 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.39 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.39 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.38 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.38 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.37 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 97.35 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.34 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.33 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.3 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.29 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.28 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.27 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.26 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 97.25 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.25 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.16 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.15 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.11 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.06 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.98 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.93 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.92 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.89 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.87 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.82 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.78 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.78 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.78 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.77 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.76 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.76 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.73 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.72 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.72 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.72 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 96.67 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 96.66 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.66 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.65 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 96.64 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.62 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.55 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.51 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.48 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.42 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.39 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 96.32 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.31 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.3 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.21 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 96.2 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.19 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.15 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.13 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.02 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.99 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.98 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.98 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.98 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.96 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.91 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.91 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.89 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 95.88 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.87 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.82 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.81 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.79 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.75 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.74 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.7 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.68 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.65 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.5 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 95.49 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 95.44 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.44 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.35 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 95.31 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.27 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.2 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 95.17 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.1 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.03 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 95.01 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.92 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 94.88 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.86 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.69 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.68 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.63 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 94.51 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.51 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.48 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.47 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.44 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.42 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 94.38 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.33 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.32 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.29 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.25 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.23 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 93.99 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.84 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.81 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.8 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 93.78 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 93.77 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.75 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.74 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 93.69 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 93.54 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 93.38 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.36 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 93.34 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.24 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.24 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 93.2 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 93.14 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 93.03 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 92.84 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.81 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.72 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 92.67 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 92.61 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.6 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 92.55 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 92.4 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.4 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 92.26 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.06 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 91.99 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 91.71 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.7 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.61 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 91.54 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 91.53 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 91.49 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 91.49 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.45 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 91.25 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.18 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 91.17 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 91.0 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 90.97 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.52 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 90.45 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 90.42 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.34 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.16 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 90.13 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 90.06 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.05 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 89.86 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.85 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 89.64 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.62 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 89.31 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 89.04 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.85 | |
| d1krwa_ | 123 | NTRC receiver domain {Salmonella typhimurium [TaxI | 88.46 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.46 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.44 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.28 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 88.27 | |
| d2j9ga2 | 114 | Biotin carboxylase (BC), N-terminal domain {Escher | 87.96 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 87.91 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.65 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 87.64 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 87.54 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 87.04 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.89 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.76 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.72 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 86.69 | |
| d1jzta_ | 243 | Hypothetical protein YNL200c (YNU0_YEAST) {Baker's | 85.72 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 85.67 | |
| d1vb5a_ | 274 | Putative eIF-2B subunit 2-like protein PH0440 {Pyr | 85.52 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 85.45 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 85.03 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 83.96 | |
| d1gc0a_ | 392 | Methionine gamma-lyase, MGL {Pseudomonas putida [T | 83.91 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 83.53 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 83.05 | |
| d1ulza2 | 114 | Biotin carboxylase (BC), N-terminal domain {Aquife | 82.45 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 82.4 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 82.31 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 82.2 | |
| d1y4ia1 | 397 | Methionine gamma-lyase, MGL {Citrobacter freundii | 81.53 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 81.32 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 80.76 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.6 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 80.33 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 80.3 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 80.23 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 80.23 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=100.00 E-value=1.5e-43 Score=299.46 Aligned_cols=309 Identities=58% Similarity=0.984 Sum_probs=258.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
++||||||||||||++|+++|+++||+|++++|+.......+.+....+...+++++++|+.|.+.+.++++++++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 57899999999999999999999999999999987776667777777778889999999999999999999999999999
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccccc
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCFAG 162 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~~~ 162 (312)
++... ...|.....+++++|.+.+..+++++|++|........+..|...++..|..++++....+++++++||+.+++
T Consensus 83 ~~~~~-~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 83 LAGGV-LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG 161 (312)
T ss_dssp CCCSS-SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred hhhcc-cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence 87654 34567788899999999875667778988876655455556666777799999999999999999999999998
Q ss_pred cccccCCCCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 163 YFLGGLCQPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 163 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
+..+....... .....+.+.++++++..+++|+++|+|++++.++.+++..++.+++.++++.+|++|+++.+++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
T d1qyda_ 162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 241 (312)
T ss_dssp HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred CCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence 76654443322 12456677888999999999999999999999999998888888877777789999999999999999
Q ss_pred cceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 242 TLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
+.++..+|.+++.+.+...+.|........+..+..|....+...+...+..+++|++++||+||||++++
T Consensus 242 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ea~~l~Pd~~~tt~~e~l~~~v 312 (312)
T d1qyda_ 242 NLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 312 (312)
T ss_dssp CCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCCCSSEEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred CCeEEECCHHHHHHHHHhcCCcHhHHHHHHHHHHhcCcccccccCcchhhHHHhCCCCCcCcHHHHHHhhC
Confidence 99999999999988888888877666555555556666555666555566778899999999999999986
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=100.00 E-value=4.3e-42 Score=289.30 Aligned_cols=304 Identities=49% Similarity=0.827 Sum_probs=248.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC-hHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD-IEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+++||||||||||||++++++|+++||+|++++|+..... +.+......+...+++++.+|+.+.+.+.+.+++++.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 5789999999999999999999999999999999865532 345555566677899999999999999999999999999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEeccc
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANC 159 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~ 159 (312)
|+++... .....++++++..++ ++++++ |+++..... .....+...++..+...+.++.+.+++++++||+.
T Consensus 82 ~~~~~~~-----~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~ 154 (307)
T d1qyca_ 82 STVGSLQ-----IESQVNIIKAIKEVG-TVKRFFPSEFGNDVDN-VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNC 154 (307)
T ss_dssp ECCCGGG-----SGGGHHHHHHHHHHC-CCSEEECSCCSSCTTS-CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCE
T ss_pred ecccccc-----cchhhHHHHHHHHhc-cccceeeecccccccc-ccccccccccccccccccchhhccCCCceecccce
Confidence 9987654 777889999999998 666654 777765543 22333334455578888999999999999999999
Q ss_pred ccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHh
Q 021470 160 FAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLI 239 (312)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~ 239 (312)
++|+....+.........+....+++.++..+++++++|+|++++.++.+++..++.+++.++++.+|+.|+++.+++++
T Consensus 155 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~ 234 (307)
T d1qyca_ 155 FAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 234 (307)
T ss_dssp EHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT
T ss_pred ecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHH
Confidence 99987766555544456677888899999999999999999999999999887888888877788999999999999999
Q ss_pred CCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHHHHHHhhC
Q 021470 240 GKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVEEYLRRYL 312 (312)
Q Consensus 240 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 312 (312)
|.++++..+|.+++.+.+...+.|........+..+..+....+.......+..+++|+++++|+||||++++
T Consensus 235 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~t~ee~l~~~v 307 (307)
T d1qyca_ 235 DKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 307 (307)
T ss_dssp TSCCEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTTEEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred CCCCcEEECCHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccCcchhhHHHhCCCCCcCcHHHHHHHhC
Confidence 9999999999999999998877766555444444455555444555555556778899999999999999986
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-33 Score=223.73 Aligned_cols=198 Identities=18% Similarity=0.200 Sum_probs=160.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+|+||+||||||++|++++++|+++||+|++++|+ ++|. ......+++++.+|+.|.+++.++++++|+||
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~-----~~~~---~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi 72 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD-----SSRL---PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----GGGS---CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcC-----hhhc---ccccccccccccccccchhhHHHHhcCCCEEE
Confidence 889999999999999999999999999999999998 4443 33446789999999999999999999999999
Q ss_pred EcCCCCcc---ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEe
Q 021470 81 CAISGVHI---RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVS 156 (312)
Q Consensus 81 ~~~~~~~~---~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r 156 (312)
|+++.... ...+...++++++++++++ +++||+ |+.+...+. .........++..|..+|+++++.+++|+++|
T Consensus 73 ~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~-~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiir 150 (205)
T d1hdoa_ 73 VLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP-TKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM 150 (205)
T ss_dssp ECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT-TCSCGGGHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred EEeccCCchhhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCC-ccccccccccchHHHHHHHHHHhcCCceEEEe
Confidence 99987543 2367788999999999999 999997 655543322 11111123566689999999999999999999
Q ss_pred cccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEec
Q 021470 157 ANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLR 220 (312)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~ 220 (312)
|+.+++... .....+..++..+..+|+.+|+|++++.+++++++.|+.+++.
T Consensus 151 p~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 151 PPHIGDQPL------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS 202 (205)
T ss_dssp CSEEECCCC------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred cceecCCCC------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence 998876422 2233445566777899999999999999999998888887774
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.8e-32 Score=229.37 Aligned_cols=243 Identities=19% Similarity=0.250 Sum_probs=179.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|||||||||||||++|++.|+++|++|++++|..... ....+..+.+...+++++++|+.|.+.+.++++ ++|+|||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH 79 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-TTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 5799999999999999999999999999998865544 233333345556799999999999999999998 7999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc----cccCCCCCchhhhHHHHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM----ANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~----~~~~~p~~~~~~~K~~~e~ 143 (312)
+|+.... ...|+.++.+++++|++.+ ++++|+ | .|+...... ..+..|..+|+.+|...|+
T Consensus 80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~ 158 (338)
T d1udca_ 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhH
Confidence 9986542 1278999999999999999 999987 3 243322211 2233566677779999999
Q ss_pred HHHH-----hCCCeEEEecccccccccccCCCC------C-c-------cCCCCCeeEEeCC------CCcceeeeeHHH
Q 021470 144 AIED-----AGIPFTYVSANCFAGYFLGGLCQP------G-S-------ILPSKDSVVLLGD------GNPKAIYVDEDD 198 (312)
Q Consensus 144 ~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~------~-~-------~~~~~~~~~~~~~------~~~~~~~v~~~D 198 (312)
++.+ .+++++++|++.++|......... . + ......++.+.++ +.+.++|++++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D 238 (338)
T d1udca_ 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEee
Confidence 8874 478899999998887532211000 0 0 0012345666553 677889999999
Q ss_pred HHHHHHHHhcC--CccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 199 IAMYTMKAIND--PRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 199 ~a~~~~~~l~~--~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++.++..+... ....+++|++.+ ++.+|+.|+++.+.+.+|.++++...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~Ni~~-~~~~si~e~~~~i~~~~g~~~~~~~~~ 290 (338)
T d1udca_ 239 LADGHVVAMEKLANKPGVHIYNLGA-GVGNSVLDVVNAFSKACGKPVNYHFAP 290 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESC-SSCEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred hhhhccccccccccccCcceeeecC-CCCCcHHHHHHHHHHHHCCCCceEECC
Confidence 99887776653 223456788864 558999999999999999887766554
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.8e-32 Score=232.00 Aligned_cols=237 Identities=15% Similarity=0.128 Sum_probs=182.4
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|+ .|||||||||||||++|+++|+++||+|++++|...... .......++..+|+.+.+.+.++++++|+|
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~d~V 83 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEGVDHV 83 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--------hhhcccCcEEEeechhHHHHHHHhhcCCeE
Confidence 44 478999999999999999999999999999988654431 112356789999999999999999999999
Q ss_pred EEcCCCCccc-----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc----------ccccCCCCCch
Q 021470 80 ICAISGVHIR-----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK----------MANAMEPGRVT 134 (312)
Q Consensus 80 ~~~~~~~~~~-----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~----------~~~~~~p~~~~ 134 (312)
+|+++..... ..|+.++.+++++|++.+ +++||+ |+ ++..... ...+..|...|
T Consensus 84 ih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y 162 (363)
T d2c5aa1 84 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF 162 (363)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHH
T ss_pred eecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHH
Confidence 9999766531 267889999999999999 999987 43 3321110 02344566677
Q ss_pred hhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCCCc--------cCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 135 FDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGS--------ILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 135 ~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
..+|..+|++++. .+++++++||+.++|..-........ ..........+++|.+.++|+|++|++++
T Consensus 163 g~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~ 242 (363)
T d2c5aa1 163 GLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEG 242 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHH
Confidence 7799999988864 58999999988888754321111110 01234567788899999999999999999
Q ss_pred HHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 203 TMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 203 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+..+++.+ .++.|++++ ++.+|+.|+++.+.+.+|++.++..++
T Consensus 243 ~~~~~~~~--~~~~~ni~~-~~~~s~~~l~~~i~~~~g~~~~i~~~~ 286 (363)
T d2c5aa1 243 VLRLTKSD--FREPVNIGS-DEMVSMNEMAEMVLSFEEKKLPIHHIP 286 (363)
T ss_dssp HHHHHHSS--CCSCEEECC-CCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred HHHHHhCC--CCCeEEEec-CCcccHHHHHHHHHHHhCCCCceEeCC
Confidence 99998876 467888864 569999999999999999887766554
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=2.1e-31 Score=225.55 Aligned_cols=236 Identities=18% Similarity=0.217 Sum_probs=179.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeE------EEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHET------YVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
|||||||||||||++|++.|+++|++| +.+++.......... .......+++++.+|..+.........++|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL--APVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG--GGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh--hhhhcCCCeEEEEeccccchhhhccccccc
Confidence 589999999999999999999999754 444433222211111 112235678999999999999999889999
Q ss_pred EEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCccc---ccccCCCCCchhhhHHH
Q 021470 78 VVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAK---MANAMEPGRVTFDDKMV 140 (312)
Q Consensus 78 ~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~---~~~~~~p~~~~~~~K~~ 140 (312)
.|+|+|+..... ..|+.++.+++++|++.+ +++||+ | .||..... .+.+..|..+|..+|..
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~ 157 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAG 157 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 999999875421 278999999999999999 899987 3 35543221 15667777777779999
Q ss_pred HHHHHHH----hCCCeEEEeccccccccccc--CCCC-CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccC
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGG--LCQP-GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTL 213 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~ 213 (312)
+|.+++. .+++++++||+.++|+.... +... ......++++.+++++++.++|+|++|+|+++..+++++. .
T Consensus 158 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~-~ 236 (322)
T d1r6da_ 158 SDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR-A 236 (322)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred HHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC-C
Confidence 9988864 68999999999998864321 1000 0012456788889999999999999999999999998875 4
Q ss_pred CceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 214 NRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
+++|+++ +++.+|+.|+++.+.+.+|.+.+
T Consensus 237 ~~~~ni~-~~~~~s~~e~~~~i~~~~~~~~~ 266 (322)
T d1r6da_ 237 GEIYHIG-GGLELTNRELTGILLDSLGADWS 266 (322)
T ss_dssp TCEEEEC-CCCEEEHHHHHHHHHHHHTCCGG
T ss_pred CCeeEEe-ecccchhHHHHHHHHHHhCCCcc
Confidence 6788886 56699999999999999998754
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.4e-31 Score=227.08 Aligned_cols=238 Identities=19% Similarity=0.215 Sum_probs=176.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHH-HhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVN-AVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~-~~~~~d~v~~ 81 (312)
|||||||||||||++|+++|+++| ++|+++++..... . ......+++++++|+++.+.+.+ +++++|+|||
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~----~---~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih 73 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI----S---RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG----G---GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch----h---hhccCCCeEEEECccCChHHHHHHHHhCCCcccc
Confidence 589999999999999999999999 5899998863321 1 22345789999999988765554 6778999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeecCC---CCCCcccc---------ccc-CCCCCchhhhH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLPSE---FGTDPAKM---------ANA-MEPGRVTFDDK 138 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~~~~~---------~~~-~~p~~~~~~~K 138 (312)
+|+.... ...|+.++.+++++|.+.+ ++.++.|+ |+...... ..+ ..|...|..+|
T Consensus 74 ~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK 152 (342)
T d2blla1 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSK 152 (342)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHH
T ss_pred ccccccccccccCCcccccccccccccccccccccc-ccccccccccccccccccccccccccccccccCCCcchhhhcc
Confidence 9997652 1278899999999999998 77766532 33321110 111 12333455599
Q ss_pred HHHHHHHHH----hCCCeEEEecccccccccccCCCCCc-----------cCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 139 MVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQPGS-----------ILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 139 ~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
..+|+++.. .+++++++|++.+++........... ....++++.+++++++.++++|++|+++++
T Consensus 153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~ 232 (342)
T d2blla1 153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 232 (342)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred cchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence 999998864 58999999988888764332221110 112467888899999999999999999999
Q ss_pred HHHhcCCc--cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 204 MKAINDPR--TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 204 ~~~l~~~~--~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
..+++++. ..+++||+++++..+|+.|+++.+.+.+|........+
T Consensus 233 ~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~ 280 (342)
T d2blla1 233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFP 280 (342)
T ss_dssp HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSC
T ss_pred eeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccC
Confidence 99998753 45678998655556899999999999999876555444
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.8e-32 Score=229.77 Aligned_cols=234 Identities=16% Similarity=0.178 Sum_probs=169.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
++||||||||||+|++|+++|+++|++|++++|..+.. .+.. ........+++...|. +..++.++|+|||+
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~-~~~~--~~~~~~~~~d~~~~~~-----~~~~~~~~d~Vihl 72 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGR-KRNV--EHWIGHENFELINHDV-----VEPLYIEVDQIYHL 72 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-GGGT--GGGTTCTTEEEEECCT-----TSCCCCCCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCC-HHHH--HHhcCCCceEEEehHH-----HHHHHcCCCEEEEC
Confidence 47999999999999999999999999999998754433 1111 1112233445555444 44456789999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc--------cccCCCCCchhhhHHH
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM--------ANAMEPGRVTFDDKMV 140 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~--------~~~~~p~~~~~~~K~~ 140 (312)
|+..... ..|+.++.+++++|++.+ ++ +|+ |+ ||.....+ .+|..|..+|..+|..
T Consensus 73 Aa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~k-~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~ 150 (312)
T d2b69a1 73 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-AR-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRV 150 (312)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CE-EEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHH
T ss_pred cccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHH
Confidence 9865421 378889999999999998 64 554 43 44321111 2344565556669999
Q ss_pred HHHHHHH----hCCCeEEEecccccccccccCCCCC-----ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 141 VRKAIED----AGIPFTYVSANCFAGYFLGGLCQPG-----SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 141 ~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+|.+++. .+++++++||+.++|+......... .....++++.+++++.+.++++|++|+++++..+++..
T Consensus 151 ~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~- 229 (312)
T d2b69a1 151 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN- 229 (312)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-
T ss_pred HHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-
Confidence 9998863 6899999999999986433211100 01135677888999999999999999999999988765
Q ss_pred cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 212 TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
.++.|+++ +++..|+.|+++.+++.+|.+.++...+
T Consensus 230 -~~~~~n~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 265 (312)
T d2b69a1 230 -VSSPVNLG-NPEEHTILEFAQLIKNLVGSGSEIQFLS 265 (312)
T ss_dssp -CCSCEEES-CCCEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred -cCCceEec-CCcccchhhHHHHHHHHhCCCCceEECC
Confidence 45678886 5669999999999999999887665443
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.8e-31 Score=226.92 Aligned_cols=239 Identities=18% Similarity=0.141 Sum_probs=174.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh---hhhccCCCeEEEccCCCHHHHHHHhcc--CCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML---LSFKEQGAKLVSGSFNDYQSLVNAVKL--VDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~ 78 (312)
|++||||||||||++|+++|+++|++|++++|..+..+..+...+ ......+++++++|++|.+++.+++++ +|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 688999999999999999999999999999997543322232211 112346899999999999999999985 599
Q ss_pred EEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCc---eeec-C---CCCCCcccc---cccCCCCCchhhhH
Q 021470 79 VICAISGVHIR----------SHQILLQLKLVDAIKEAGNVK---RFLP-S---EFGTDPAKM---ANAMEPGRVTFDDK 138 (312)
Q Consensus 79 v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~---~~v~-S---~~g~~~~~~---~~~~~p~~~~~~~K 138 (312)
|||+++..... +.|+.++.+++++|++.+ ++ +||+ | .||.....+ +++..|.++|..+|
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence 99999875421 368999999999999986 54 6886 3 366532221 55667777777799
Q ss_pred HHHHHHHHH----hCCCeEEEecccccccccccCCC------CCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 139 MVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQ------PGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 139 ~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|++++. .+++++++||+.++|+....... ... ..........++++++.++++|++|+++++..++
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence 999988864 58999999999888763221110 000 0122334556788999999999999999999998
Q ss_pred cCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceee
Q 021470 208 NDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKS 246 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
+.+ .++.|+++ +++.+|+.|+++.+.+.+|...++.
T Consensus 241 ~~~--~~~~yni~-sg~~~s~~~~~~~~~~~~g~~~~~~ 276 (357)
T d1db3a_ 241 QQE--QPEDFVIA-TGVQYSVRQFVEMAAAQLGIKLRFE 276 (357)
T ss_dssp SSS--SCCCEEEC-CCCCEEHHHHHHHHHHTTTEEEEEE
T ss_pred hCC--CCCeEEEC-CCCceehHHHHHHHHHHhCCccccc
Confidence 775 35788886 5669999999999999999776554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=3.4e-30 Score=219.75 Aligned_cols=237 Identities=16% Similarity=0.122 Sum_probs=182.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh----hhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML----LSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
+|+|||||||||||++|+++|++.||+|++++|..+.. ....... ......+++++.+|..|...+.....+.+.
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGH-QRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-HHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcc-hhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 57999999999999999999999999999999865543 2222111 122346789999999999999999999999
Q ss_pred EEEcCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc---cccCCCCCchhhhHHHH
Q 021470 79 VICAISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM---ANAMEPGRVTFDDKMVV 141 (312)
Q Consensus 79 v~~~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~~~~K~~~ 141 (312)
|+|+++.... ...|+.++.+++++|.+++ ++++|+ | .||.....+ +.+..|...|..+|..+
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 173 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN 173 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence 9999986542 1378999999999999999 989887 3 355432211 55667767777799999
Q ss_pred HHHHHH----hCCCeEEEecccccccccccCCCCC-c------cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCC
Q 021470 142 RKAIED----AGIPFTYVSANCFAGYFLGGLCQPG-S------ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 142 e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~ 210 (312)
|+++.. .+++++++||+.++|+......... . ....++++.++++|.+.++|+|++|++.++..++..+
T Consensus 174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~ 253 (341)
T d1sb8a_ 174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 253 (341)
T ss_dssp HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcc
Confidence 988764 5799999999988876433221111 0 1134667888999999999999999999999988765
Q ss_pred c-cCCceEEecCCCCcCCHHHHHHHHHHHhCCc
Q 021470 211 R-TLNRTMYLRPPKNILSQREVVETWEKLIGKT 242 (312)
Q Consensus 211 ~-~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~ 242 (312)
. ..++.|++. .++.+|+.|+++.+.+.++.+
T Consensus 254 ~~~~~~~~~~~-~~~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 254 LDARNQVYNIA-VGGRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp GGGCSEEEEES-CSCCEEHHHHHHHHHHHHHHT
T ss_pred ccccceeeeec-ccccchHHHHHHHHHHHhccc
Confidence 3 456677775 556999999999999998865
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1e-29 Score=217.27 Aligned_cols=247 Identities=19% Similarity=0.191 Sum_probs=178.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC-----CChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG-----VDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
|+ +||||||||||||++|+++|+++|++|++++|.... ..+........+...+++++++|+.|.+.+.+++.+
T Consensus 1 M~-kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 1 MA-EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CC-CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence 76 799999999999999999999999999999753221 113344444556678999999999999999998874
Q ss_pred --CCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCcccc----cccCCCCCchh
Q 021470 76 --VDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAKM----ANAMEPGRVTF 135 (312)
Q Consensus 76 --~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~~----~~~~~p~~~~~ 135 (312)
+++++|+|+..... ..|+.++.+++++|++.+ +++|++ | .++...... .....|..+|.
T Consensus 80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~ 158 (346)
T d1ek6a_ 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG 158 (346)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHH
T ss_pred cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChHH
Confidence 56789999876521 268899999999999999 999887 2 244332211 11223445666
Q ss_pred hhHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCc--------------cCCCCCeeEEeC------CCCcc
Q 021470 136 DDKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGS--------------ILPSKDSVVLLG------DGNPK 190 (312)
Q Consensus 136 ~~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~------~~~~~ 190 (312)
.+|..+|+.+.+ .+++++++|++.++|...+....... ....+..+.+++ ++.+.
T Consensus 159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~ 238 (346)
T d1ek6a_ 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee
Confidence 699999988764 47889999999888754322111000 001234444443 45677
Q ss_pred eeeeeHHHHHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCCH
Q 021470 191 AIYVDEDDIAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSISK 250 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 250 (312)
++|+|++|+|.++..++... ...+++|++++ ++..|+.|+++.+.+.+|.++++...+.
T Consensus 239 Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~-~~~~s~~dl~~~i~~~~~~~~~~~~~~~ 299 (346)
T d1ek6a_ 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGT-GTGYSVLQMVQAMEKASGKKIPYKVVAR 299 (346)
T ss_dssp ECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECC-SCCEEHHHHHHHHHHHHCSCCCEEEECC
T ss_pred EeEEEEEeccchhhhhccccccccCceEEEeCC-CCcccHHHHHHHHHHHhCCCCCeEECCC
Confidence 89999999999988876442 23456788864 5699999999999999999877665553
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=3.8e-31 Score=226.17 Aligned_cols=237 Identities=14% Similarity=0.174 Sum_probs=175.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
||+|||||||||||++|++.|+++|++|.++.++..+. .........+...+++++.+|+.|.+.+..++.+++.|+|+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~-~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-TCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc-cccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 68999999999999999999999998877766542111 00111113345678999999999999999999999999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceeecC---CCCCCcc---------------cccccCCCCCch
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPS---EFGTDPA---------------KMANAMEPGRVT 134 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S---~~g~~~~---------------~~~~~~~p~~~~ 134 (312)
++..... ..|+.++.+++++|...+ .+.++.| .||.... ..+++..|.+.|
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y 159 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY 159 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence 9876421 268899999999999998 5544442 3442110 003345565666
Q ss_pred hhhHHHHHHHHHH----hCCCeEEEeccccccccccc--CCCC-CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQP-GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..+|.+++. .+++++++||+.++|+.... .... ......+....+++++++.++++|++|+++++..++
T Consensus 160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~ 239 (346)
T d1oc2a_ 160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL 239 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHH
Confidence 6699999988864 68999999999998853211 0000 001134566788899999999999999999999988
Q ss_pred cCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 208 NDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
..+. .++.|+++++ +..++.|+++.+.+.+|.+.
T Consensus 240 ~~~~-~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 240 TKGR-MGETYLIGAD-GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp HHCC-TTCEEEECCS-CEEEHHHHHHHHHHHTTCCT
T ss_pred hhcc-cCcccccccc-ccccchHHHHHHHHHhCCCC
Confidence 8765 4667888755 59999999999999999763
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=3.5e-31 Score=227.35 Aligned_cols=236 Identities=17% Similarity=0.179 Sum_probs=172.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC-CCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP-EIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
|+|||||||||||++|+++|++.|++|++..++ +....... ........+++++++|++|.+.+.++++ ++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES--LSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG--GTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHH--HHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 589999999999999999999999876555443 22221111 1122335689999999999999999987 589999
Q ss_pred EcCCCCcc----------ccchhHhHHHHHHHHHHhC--------CCceeec-C---CCCCCcccc-------------c
Q 021470 81 CAISGVHI----------RSHQILLQLKLVDAIKEAG--------NVKRFLP-S---EFGTDPAKM-------------A 125 (312)
Q Consensus 81 ~~~~~~~~----------~~~~~~~~~~l~~aa~~~~--------~v~~~v~-S---~~g~~~~~~-------------~ 125 (312)
|+|+.... .+.|+.++.+++++|++.+ .+++||+ | .||...... .
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 99987542 1378889999999998875 0347776 3 354322110 2
Q ss_pred ccCCCCCchhhhHHHHHHHHHH----hCCCeEEEeccccccccccc--CCCC-CccCCCCCeeEEeCCCCcceeeeeHHH
Q 021470 126 NAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGG--LCQP-GSILPSKDSVVLLGDGNPKAIYVDEDD 198 (312)
Q Consensus 126 ~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~D 198 (312)
++..|...|..+|..+|.++.. .+++++++||+.++|+.... +... ......++++.++++|++.++|+|++|
T Consensus 159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D 238 (361)
T d1kewa_ 159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence 3345556677799999999864 68999999999888864211 1000 001134677888999999999999999
Q ss_pred HHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcc
Q 021470 199 IAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTL 243 (312)
Q Consensus 199 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
+|+++..+++++. .+..|++. +++..|..|+++.+.+.++...
T Consensus 239 ~a~ai~~~~~~~~-~~~~~Ni~-s~~~~s~~~~~~~i~~~~~~~~ 281 (361)
T d1kewa_ 239 HARALHMVVTEGK-AGETYNIG-GHNEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHHHHHHHHHHCC-TTCEEEEC-CCCEEEHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCC-CCCeEEEC-CCCCcchHHHHhHhhhhccccc
Confidence 9999999998775 46788885 5669999999999998876543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=8e-30 Score=215.67 Aligned_cols=235 Identities=16% Similarity=0.071 Sum_probs=176.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
++|||||||||||++|+++|+++||+|++++|..+.....+. +.+ ...+++++++|+.|.+.+.+.+. ..++++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 77 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL---RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 77 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH---HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH---HHhcccCCcEEEEccccChHHhhhhhccccccccc
Confidence 689999999999999999999999999999998655433333 222 24578999999999999999877 467888
Q ss_pred EcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecC-C---CCCCccc---ccccCCCCCchhhhHHHHHH
Q 021470 81 CAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPS-E---FGTDPAK---MANAMEPGRVTFDDKMVVRK 143 (312)
Q Consensus 81 ~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S-~---~g~~~~~---~~~~~~p~~~~~~~K~~~e~ 143 (312)
|+++..... ..|+.++.+++++|++.+..++|+++ + +|..... .+++..|..+|..+|...|.
T Consensus 78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 157 (321)
T d1rpna_ 78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW 157 (321)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHH
Confidence 888765421 25788999999999999944466653 2 3332221 14566677777779999999
Q ss_pred HHHH----hCCCeEEEecccccccccccCC------CCCc-cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 144 AIED----AGIPFTYVSANCFAGYFLGGLC------QPGS-ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 144 ~~~~----~~~~~~i~r~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
++.. .+++++++||+.++|+...... .... ....+.....++++++.++|+|++|+|+++..++.++.
T Consensus 158 ~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~- 236 (321)
T d1rpna_ 158 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK- 236 (321)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC-
Confidence 8864 6899999999888876422110 0000 01234455668899999999999999999999998874
Q ss_pred CCceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 213 LNRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
++.|++.+ ++..|+.++++.+.+.+|.+.+
T Consensus 237 -~~~~ni~~-~~~~s~~~~~~~~~~~~~~~~~ 266 (321)
T d1rpna_ 237 -ADDYVVAT-GVTTTVRDMCQIAFEHVGLDYR 266 (321)
T ss_dssp -CCCEEECC-SCEEEHHHHHHHHHHTTTCCGG
T ss_pred -cCCceecc-cccceehhhhHHHHHHhCCCcc
Confidence 46788875 4599999999999999998653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.97 E-value=7.8e-30 Score=218.29 Aligned_cols=236 Identities=17% Similarity=0.207 Sum_probs=180.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-HHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-QSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~l~~~~~~~d~v~~ 81 (312)
+|+|+||||||+||++++++|+++||+|++++|+.++. +.. ......+++++++|+.|+ +.+..++.++|++++
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~---~~~--~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~ 77 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL---IAE--ELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 77 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH---HHH--HHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchh---hhh--hhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence 58999999999999999999999999999999986542 221 122346899999999884 557788999999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCce-eecCCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCCCeEEEecccc
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKR-FLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGIPFTYVSANCF 160 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~-~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~~~~i~r~~~~ 160 (312)
...... ..++....+++++|.++| +++ +++|+.+.... .+..+..+++.+|...++++.+.+.+++++||+.|
T Consensus 78 ~~~~~~--~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~---~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~ 151 (350)
T d1xgka_ 78 NTTSQA--GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSL---YGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIY 151 (350)
T ss_dssp CCCSTT--SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGG---TSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEE
T ss_pred eccccc--chhhhhhhHHHHHHHHhC-CCceEEEeecccccc---CCcccchhhhhhHHHHHHHHHhhccCceeeeecee
Confidence 876543 456888999999999999 655 55676554322 23334567788999999999999999999999999
Q ss_pred cccccccCCCCCcc-CCC--CCeeEEeCCCCcceeeeeH-HHHHHHHHHHhcCC--ccCCceEEecCCCCcCCHHHHHHH
Q 021470 161 AGYFLGGLCQPGSI-LPS--KDSVVLLGDGNPKAIYVDE-DDIAMYTMKAINDP--RTLNRTMYLRPPKNILSQREVVET 234 (312)
Q Consensus 161 ~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~v~~-~D~a~~~~~~l~~~--~~~~~~~~~~~~~~~~s~~e~~~~ 234 (312)
++++.......... ... ......+.+++..++++++ +|+++++..++.++ ...|+.|++.| +.+|+.|+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g--~~~T~~eia~~ 229 (350)
T d1xgka_ 152 NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF--ETLSPVQVCAA 229 (350)
T ss_dssp GGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--EEECHHHHHHH
T ss_pred eccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC--CcCCHHHHHHH
Confidence 99865433322111 111 1234455677888999986 79999999999754 34577887753 48999999999
Q ss_pred HHHHhCCcceeecCCHH
Q 021470 235 WEKLIGKTLQKSSISKE 251 (312)
Q Consensus 235 ~~~~~g~~~~~~~~~~~ 251 (312)
+++++|+++++..+|.+
T Consensus 230 l~~~~G~~v~~~~vp~~ 246 (350)
T d1xgka_ 230 FSRALNRRVTYVQVPKV 246 (350)
T ss_dssp HHHHHTSCEEEEECSSC
T ss_pred HHHHHCCcceEEECCHH
Confidence 99999999999888854
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=5.2e-29 Score=212.87 Aligned_cols=243 Identities=20% Similarity=0.241 Sum_probs=173.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|.|||||||||||++|++.|+++|++|+++++...+. .........+...+++++++|+.|.+.+.+++. ++|+|||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih 80 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNST-YDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC-THHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcc-hhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 5699999999999999999999999999998765554 333333355557799999999999999999887 7999999
Q ss_pred cCCCCcc----------ccchhHhHHHHHHHHHHhCCCceeec-C---CCCCCccc-------ccccCCCCCchhhhHHH
Q 021470 82 AISGVHI----------RSHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAK-------MANAMEPGRVTFDDKMV 140 (312)
Q Consensus 82 ~~~~~~~----------~~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~-------~~~~~~p~~~~~~~K~~ 140 (312)
+|+.... ..+|+.++.+++++|++.+ ++++|+ | .||..... .+.+..|.++|..+|..
T Consensus 81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 159 (347)
T d1z45a2 81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYA 159 (347)
T ss_dssp CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHH
T ss_pred ccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHH
Confidence 9997642 1278999999999999999 999886 3 35432211 14455666677779999
Q ss_pred HHHHHHH------hCCCeEEEecccccccccccCCCCC-------cc-------CCCCCeeEEeCC------CCcceeee
Q 021470 141 VRKAIED------AGIPFTYVSANCFAGYFLGGLCQPG-------SI-------LPSKDSVVLLGD------GNPKAIYV 194 (312)
Q Consensus 141 ~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~-------~~-------~~~~~~~~~~~~------~~~~~~~v 194 (312)
+|+++.. .+++++++|++.+++.......... .. .....++.++++ +...++++
T Consensus 160 ~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~ 239 (347)
T d1z45a2 160 IENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI 239 (347)
T ss_dssp HHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEE
T ss_pred HHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeee
Confidence 9998764 3688999998877764221111100 00 012233444444 34566788
Q ss_pred eHHHHHHHHHHHhcC------CccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 195 DEDDIAMYTMKAIND------PRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~------~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++.|.+.++..++.. ....+++|++. +++.+|+.|+++.+.+.+|.+.++...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~-~~~~~s~~e~~~~i~~~~~~~~~~~~~~ 299 (347)
T d1z45a2 240 HVVDLAKGHIAALQYLEAYNENEGLCREWNLG-SGKGSTVFEVYHAFCKASGIDLPYKVTG 299 (347)
T ss_dssp EHHHHHHHHHHHHHHHHHSCTTCCEEEEEEES-CSCCEEHHHHHHHHHHHHTCCCCC----
T ss_pred eeecccccccccccccccccccccccccceec-CCCcccHHHHHHHHHHHHCCCCceEeCC
Confidence 888888888887753 23345778885 5669999999999999999987665443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=9.7e-29 Score=214.71 Aligned_cols=238 Identities=18% Similarity=0.182 Sum_probs=171.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC---------------CCCCChHHHHHhhhhccCCCeEEEccCCCHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP---------------EIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQ 67 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~ 67 (312)
.|||||||||||||++|+++|+++||+|++++.. +.....+.......+...+++++++|+.|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 3799999999999999999999999999998511 1111123333334455678999999999999
Q ss_pred HHHHHhc--cCCEEEEcCCCCccc-------------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCccc-----
Q 021470 68 SLVNAVK--LVDVVICAISGVHIR-------------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAK----- 123 (312)
Q Consensus 68 ~l~~~~~--~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~----- 123 (312)
.+.++++ ++|+|||+|+..... ..|+.++.+++++|++.+..+++++ |+ |+.....
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 9999998 469999999864321 2689999999999999983334554 32 2211100
Q ss_pred -----------ccccCCCCCchhhhHHHHHHHHH----HhCCCeEEEecccccccccccCC----------CCC------
Q 021470 124 -----------MANAMEPGRVTFDDKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLC----------QPG------ 172 (312)
Q Consensus 124 -----------~~~~~~p~~~~~~~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~----------~~~------ 172 (312)
...+..|.+.|..+|..+|.++. +.+++++++||+.++|+...... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 01244565566669999998875 46899999999998886422110 000
Q ss_pred ----ccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 173 ----SILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 173 ----~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
.....+.++.+++++.+.++|+|++|+++++..+++++...+..+.+.+.++.+|+.|+++.+.++.+
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~ 312 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS 312 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence 00123567888999999999999999999999999887655544333334568999999999988753
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.96 E-value=1.8e-28 Score=208.65 Aligned_cols=242 Identities=14% Similarity=0.130 Sum_probs=172.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhcc--CCEEEEc
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKL--VDVVICA 82 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~--~d~v~~~ 82 (312)
||||||||||||++|+++|+++|++|+++++-.......+... .....+++++.+|+.|.+.+.+++++ +|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~--~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHW--LSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHH--HHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHH--hhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999999999999999999999999999976433321222211 12346899999999999999999985 5999999
Q ss_pred CCCCccc----------cchhHhHHHHHHHHHHhCCCceee-cCCC----CCCccc-------------------ccccC
Q 021470 83 ISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFL-PSEF----GTDPAK-------------------MANAM 128 (312)
Q Consensus 83 ~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v-~S~~----g~~~~~-------------------~~~~~ 128 (312)
|+..... ..|+.++.+++++|.+.+ +++++ +||. +..... ..++.
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 158 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCcc
Confidence 9876531 278999999999999999 66544 4331 111000 01223
Q ss_pred CCCCchhhhHHHHHHHHH----HhCCCeEEEeccccc-ccccccCCCCC----------ccCCCCCeeEEeCCCCcceee
Q 021470 129 EPGRVTFDDKMVVRKAIE----DAGIPFTYVSANCFA-GYFLGGLCQPG----------SILPSKDSVVLLGDGNPKAIY 193 (312)
Q Consensus 129 ~p~~~~~~~K~~~e~~~~----~~~~~~~i~r~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 193 (312)
.|...|...|...|.++. ..+....++|+..++ +.......... .....+.++.++++++..++|
T Consensus 159 ~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 159 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 344445558888877754 467778777755444 32221111100 011246678899999999999
Q ss_pred eeHHHHHHHHHHHhcCCc-cCCceEEec-CCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 194 VDEDDIAMYTMKAINDPR-TLNRTMYLR-PPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 194 v~~~D~a~~~~~~l~~~~-~~~~~~~~~-~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+|++|++++++.+++.+. ..++++++. +.+..+++.|+++.+.+.+|.+.++..++
T Consensus 239 ~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~ 296 (338)
T d1orra_ 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP 296 (338)
T ss_dssp EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred ecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCC
Confidence 999999999999998753 456778874 34567899999999999999887766554
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=7.3e-28 Score=208.41 Aligned_cols=245 Identities=19% Similarity=0.228 Sum_probs=171.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCC-----ChHHHHHhhh----------hccCCCeEEEccCCCH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGV-----DIEKVQMLLS----------FKEQGAKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~-----~~~~~~~~~~----------l~~~~~~~v~~D~~d~ 66 (312)
.|||||||||||||++|+++|++ .||+|+++++-.... ...+...... .....+.++++|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 46999999999999999999997 579999997421110 0001111111 1234688999999999
Q ss_pred HHHHHHhc---cCCEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeec-C---CCCCCccc------
Q 021470 67 QSLVNAVK---LVDVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLP-S---EFGTDPAK------ 123 (312)
Q Consensus 67 ~~l~~~~~---~~d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~-S---~~g~~~~~------ 123 (312)
+.+.++++ ++|+|||+|+..... ..|+..+.++++++++.+ ++++++ | .++.....
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccccccccc
Confidence 99999886 679999999976532 268899999999999999 888775 1 23221110
Q ss_pred ----ccccCCCCCchhhhHHHHHHHHHH----hCCCeEEEecccccccccccCCCC------------------------
Q 021470 124 ----MANAMEPGRVTFDDKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQP------------------------ 171 (312)
Q Consensus 124 ----~~~~~~p~~~~~~~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~------------------------ 171 (312)
.+++..|..+|..+|...|+++.. .+++++++|++.++|+........
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence 034556667777799999998864 689999999998887533211100
Q ss_pred ----CccCCCCCeeEEeC------CCCcceeeeeHHHHHHHHHHHhcCC--------ccCCceEEecCCCCcCCHHHHHH
Q 021470 172 ----GSILPSKDSVVLLG------DGNPKAIYVDEDDIAMYTMKAINDP--------RTLNRTMYLRPPKNILSQREVVE 233 (312)
Q Consensus 172 ----~~~~~~~~~~~~~~------~~~~~~~~v~~~D~a~~~~~~l~~~--------~~~~~~~~~~~~~~~~s~~e~~~ 233 (312)
......+.++.+++ +|.+.++|+|++|+++++..++... ...+++|++. +++.+|+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~-s~~~~s~~el~~ 319 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLG-TSRGYSVREVIE 319 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEES-CSCCEEHHHHHH
T ss_pred cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeC-CCCceeHHHHHH
Confidence 00012234455554 4677889999999999999988532 2234677875 567999999999
Q ss_pred HHHHHhCCcceeecCC
Q 021470 234 TWEKLIGKTLQKSSIS 249 (312)
Q Consensus 234 ~~~~~~g~~~~~~~~~ 249 (312)
.+.+.+|.+.++...+
T Consensus 320 ~i~~~~~~~~~~~~~~ 335 (383)
T d1gy8a_ 320 VARKTTGHPIPVRECG 335 (383)
T ss_dssp HHHHHHCCCCCEEEEC
T ss_pred HHHHHhCCCCceEECC
Confidence 9999999887665444
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.96 E-value=3.7e-29 Score=207.50 Aligned_cols=257 Identities=14% Similarity=0.105 Sum_probs=185.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|||||||||||||++|+++|.++||+|++++|+ .+|+.|.+++.++++ ++|+|||
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~-----------------------~~D~~d~~~~~~~l~~~~~d~vih 58 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVVIN 58 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech-----------------------hccCCCHHHHHHHHHHcCCCEEEe
Confidence 689999999999999999999999999999887 258999999999987 6799999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCC---CCCCcccc---cccCCCCCchhhhHHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~ 145 (312)
+++..... ..|+....++.+++...+ ...++.|+ ++.....+ .++..|...|...|...|+++
T Consensus 59 ~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~ 137 (281)
T d1vl0a_ 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFV 137 (281)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred eccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHH
Confidence 99876521 145666778888888777 44444432 23222111 344555566666999999999
Q ss_pred HHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEecCCCCc
Q 021470 146 EDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNI 225 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~ 225 (312)
++.+.+++++||+.++|+..............+....+.+ +..+++++++|+++++..+++++. .+.|++.++ +.
T Consensus 138 ~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~--~g~~~~~~~-~~ 212 (281)
T d1vl0a_ 138 KALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKN--YGTFHCTCK-GI 212 (281)
T ss_dssp HHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTC--CEEEECCCB-SC
T ss_pred HHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhcc--cCceeEeCC-Cc
Confidence 9999999999999998864322111101112344555554 578999999999999999998874 358888755 59
Q ss_pred CCHHHHHHHHHHHhCCcceeecCCHHHHHHHHHhcCccccccceeeeeeeeeCcccccccCCCcccccccCCCCcccCHH
Q 021470 226 LSQREVVETWEKLIGKTLQKSSISKEEFLASMKEQNYAGQVGLTHYYHVCYEGCLTNFEIGNEGVEASQLYPEIKYTTVE 305 (312)
Q Consensus 226 ~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (312)
+|+.|+++.+++.+|.+.++.+++.+++ +.+.. ++... .++ ..++.+.+ ++++.+|+
T Consensus 213 ~s~~e~~~~i~~~~g~~~~i~~i~~~~~-------~~~a~-----------rp~~~--~ld--~~k~~~~~-g~~~~~~~ 269 (281)
T d1vl0a_ 213 CSWYDFAVEIFRLTGIDVKVTPCTTEEF-------PRPAK-----------RPKYS--VLR--NYMLELTT-GDITREWK 269 (281)
T ss_dssp EEHHHHHHHHHHHHCCCCEEEEECSTTS-------CCSSC-----------CCSBC--CBC--CHHHHHTT-CCCCCBHH
T ss_pred cchHHHHHHHHHHhCCCceEEeccHHHc-------CCcCC-----------Ccccc--ccC--HHHHHHHh-CCCCCCHH
Confidence 9999999999999999998888775432 11100 01100 112 23666666 78888999
Q ss_pred HHHHhhC
Q 021470 306 EYLRRYL 312 (312)
Q Consensus 306 e~~~~~~ 312 (312)
|.|++++
T Consensus 270 ~~l~~~l 276 (281)
T d1vl0a_ 270 ESLKEYI 276 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-28 Score=209.90 Aligned_cols=242 Identities=19% Similarity=0.161 Sum_probs=177.4
Q ss_pred cEE-EEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh----hhhccCCCeEEEccCCCHHHHHHHhc--cC
Q 021470 4 SKV-LIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML----LSFKEQGAKLVSGSFNDYQSLVNAVK--LV 76 (312)
Q Consensus 4 ~~i-lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~l~~~~~~~v~~D~~d~~~l~~~~~--~~ 76 (312)
+|| ||||||||||++|+++|+++||+|++++|..+..+..+.+.+ ......+++++++|++|.+.+.+++. ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 999999999999999999999999999997543222121100 11113478999999999999999987 57
Q ss_pred CEEEEcCCCCccc----------cchhHhHHHHHHHHHHhCCC---ceeec-C---CCCCCcccc---cccCCCCCchhh
Q 021470 77 DVVICAISGVHIR----------SHQILLQLKLVDAIKEAGNV---KRFLP-S---EFGTDPAKM---ANAMEPGRVTFD 136 (312)
Q Consensus 77 d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v---~~~v~-S---~~g~~~~~~---~~~~~p~~~~~~ 136 (312)
++++|+++..... +.|+.++.+++++|++++ + ++||+ | .||.....+ +.+..|.++|..
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~ 159 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA 159 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC-CCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHH
Confidence 8999998865421 378889999999999987 4 36776 3 366432221 556677777777
Q ss_pred hHHHHHHHHHH----hCCCeEEEecccccccccccCCCC-------CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 137 DKMVVRKAIED----AGIPFTYVSANCFAGYFLGGLCQP-------GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 ~K~~~e~~~~~----~~~~~~i~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..+|+++.. .+++++++||+.++|+........ ........+...++++++.++++|++|+++++..
T Consensus 160 sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~ 239 (347)
T d1t2aa_ 160 AKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWL 239 (347)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHH
Confidence 99999998864 589999999988887632211100 0001235567778899999999999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
++.+... +.+++. .....+..+....+...+|+.+.....+
T Consensus 240 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
T d1t2aa_ 240 MLQNDEP--EDFVIA-TGEVHSVREFVEKSFLHIGKTIVWEGKN 280 (347)
T ss_dssp HHHSSSC--CCEEEC-CSCCEEHHHHHHHHHHHTTCCEEEESCG
T ss_pred HhhcCCC--ccceec-cccccccchhhhhhhhhhcceeeecccc
Confidence 9988642 345664 4568999999999999999886655444
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=2.6e-28 Score=207.81 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=169.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH----hhhhccCCCeEEEccCCCHHHHHHHhc--cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM----LLSFKEQGAKLVSGSFNDYQSLVNAVK--LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~ 76 (312)
++++||||||||||++|++.|+++||+|++++|..+.....+... ........++++.+|+.+.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 478999999999999999999999999999999754321222110 012234567899999999999999886 68
Q ss_pred CEEEEcCCCCccc----------cchhHhHHHHHHHHHHhC----CCceeec-CC---CCCCcc--cccccCCCCCchhh
Q 021470 77 DVVICAISGVHIR----------SHQILLQLKLVDAIKEAG----NVKRFLP-SE---FGTDPA--KMANAMEPGRVTFD 136 (312)
Q Consensus 77 d~v~~~~~~~~~~----------~~~~~~~~~l~~aa~~~~----~v~~~v~-S~---~g~~~~--~~~~~~~p~~~~~~ 136 (312)
|+|||+|+..... ..|+.++.+++++++... ...++++ |+ ++.... ..+++..|...|..
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 9999999975521 267778899999987653 1223444 21 222111 11556677777777
Q ss_pred hHHHHHHHHH----HhCCCeEEEecccccccccccCCCCC-c------cCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 137 DKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLCQPG-S------ILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 ~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..+|.++. ..+++++++||+.++|+......... . .........+.+++.+.++++|++|+++++..
T Consensus 161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~ 240 (339)
T d1n7ha_ 161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 240 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHH
Confidence 9999998875 36899999999998886432111000 0 01223455667889999999999999999999
Q ss_pred HhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhCCcce
Q 021470 206 AINDPRTLNRTMYLRPPKNILSQREVVETWEKLIGKTLQ 244 (312)
Q Consensus 206 ~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 244 (312)
+++++.. ..+++. .+...+..++++.+.+.+|...+
T Consensus 241 ~~~~~~~--~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~ 276 (339)
T d1n7ha_ 241 MLQQEKP--DDYVVA-TEEGHTVEEFLDVSFGYLGLNWK 276 (339)
T ss_dssp HHTSSSC--CEEEEC-CSCEEEHHHHHHHHHHHTTCCGG
T ss_pred HHhcCCC--Cccccc-cccccccchhhhhhhhhhhcccC
Confidence 9998853 344554 35589999999999999997643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=3e-28 Score=207.61 Aligned_cols=230 Identities=20% Similarity=0.138 Sum_probs=161.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-----ccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-----KEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-----~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
.++|||||||||||++|++.|+++|++|++++|+ ..+...++.+ .......+.+|+.|.+++.+++.++|
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS-----ASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC-----chhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence 3799999999999999999999999999999998 4444322221 12234567799999999999999999
Q ss_pred EEEEcCCCCccc-------cchhHhHHHHHHHHHHhCCCceeec-CCCCCC---cc-c----------------------
Q 021470 78 VVICAISGVHIR-------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTD---PA-K---------------------- 123 (312)
Q Consensus 78 ~v~~~~~~~~~~-------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~---~~-~---------------------- 123 (312)
+|+|+++..... ..|+.++.+++++|++.+.+++||+ |+.+.. .. .
T Consensus 86 ~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 165 (342)
T d1y1pa1 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred hhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence 999999976532 2588999999999999755899887 542210 00 0
Q ss_pred ccccCCCCCchhhhHHHHHHHHH----Hh--CCCeEEEecccccccccccCCCCCc------cCCCCCeeEEeCCCCcce
Q 021470 124 MANAMEPGRVTFDDKMVVRKAIE----DA--GIPFTYVSANCFAGYFLGGLCQPGS------ILPSKDSVVLLGDGNPKA 191 (312)
Q Consensus 124 ~~~~~~p~~~~~~~K~~~e~~~~----~~--~~~~~i~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 191 (312)
.+.+..|..+|..+|..+|.++. +. +++++++||+.++|+.......... ....+... ....++..+
T Consensus 166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~-~~~~~~~~~ 244 (342)
T d1y1pa1 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS-PALALMPPQ 244 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC-HHHHTCCSE
T ss_pred ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcC-cccCCccce
Confidence 01122233346669999887654 33 4567788999888865432222110 00112222 222355668
Q ss_pred eeeeHHHHHHHHHHHhcCCccCCceEEecCCCCcCCHHHHHHHHHHHhC
Q 021470 192 IYVDEDDIAMYTMKAINDPRTLNRTMYLRPPKNILSQREVVETWEKLIG 240 (312)
Q Consensus 192 ~~v~~~D~a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g 240 (312)
+|+|++|+|++++.+++++...+. +++.+ ++.+|++|+++++.+.++
T Consensus 245 ~~v~v~Dva~~~i~~l~~~~~~g~-~~~~~-~~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 245 YYVSAVDIGLLHLGCLVLPQIERR-RVYGT-AGTFDWNTVLATFRKLYP 291 (342)
T ss_dssp EEEEHHHHHHHHHHHHHCTTCCSC-EEEEC-CEEECHHHHHHHHHHHCT
T ss_pred eeeeHHHHHHHHHHhhcCccccce-EEEEc-CCceEHHHHHHHHHHHcC
Confidence 999999999999999998875554 55654 559999999999999874
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=4.1e-28 Score=195.26 Aligned_cols=199 Identities=18% Similarity=0.175 Sum_probs=147.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++++|+|||||||+|++|+++|+++| ++|++++|+..... ......++...+|+.+.+++.++++++|+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~--------~~~~~~i~~~~~D~~~~~~~~~~~~~~d~ 83 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--------EEAYKNVNQEVVDFEKLDDYASAFQGHDV 83 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC--------SGGGGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc--------ccccceeeeeeeccccccccccccccccc
Confidence 667899999999999999999999999 48999999865432 11245788889999999999999999999
Q ss_pred EEEcCCCCcc-------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCC
Q 021470 79 VICAISGVHI-------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGI 150 (312)
Q Consensus 79 v~~~~~~~~~-------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~ 150 (312)
+||+++.... ...|+..+.+++++|++.+ +++||+ |+.+..... ...|..+|..+|+.+.+.++
T Consensus 84 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~-------~~~Y~~~K~~~E~~l~~~~~ 155 (232)
T d2bkaa1 84 GFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSS-------NFLYLQVKGEVEAKVEELKF 155 (232)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC-------SSHHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccccCc-------cchhHHHHHHhhhccccccc
Confidence 9999986542 2367888999999999999 999987 666654332 34566799999999999888
Q ss_pred C-eEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCceEEe
Q 021470 151 P-FTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNRTMYL 219 (312)
Q Consensus 151 ~-~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~~~~~ 219 (312)
+ ++|+||+.++|+......... .....+............|+++|+|++++.++..+.. ++.+.+
T Consensus 156 ~~~~IlRP~~i~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~ 221 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQESRPGEW---LVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELL 221 (232)
T ss_dssp SEEEEEECCEEECTTGGGSHHHH---HHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEE
T ss_pred cceEEecCceeecCCCcCcHHHH---HHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEE
Confidence 6 899999999986432110000 0000011122233345679999999999999888753 444444
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.5e-26 Score=194.82 Aligned_cols=224 Identities=16% Similarity=0.172 Sum_probs=166.2
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v 79 (312)
+++||||||||||||++|+++|+++|+.|+++.+.. ..|+.|.+.+.+.++ ++|.|
T Consensus 1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~~~d~v 58 (315)
T d1e6ua_ 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQV 58 (315)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhcCCCEE
Confidence 368999999999999999999999999988765431 258899999998887 58999
Q ss_pred EEcCCCCccc-----------cchhHhHHHHHHHHHHhCCCceeec-CC---CCCCcccc---c-----ccCCCCCchhh
Q 021470 80 ICAISGVHIR-----------SHQILLQLKLVDAIKEAGNVKRFLP-SE---FGTDPAKM---A-----NAMEPGRVTFD 136 (312)
Q Consensus 80 ~~~~~~~~~~-----------~~~~~~~~~l~~aa~~~~~v~~~v~-S~---~g~~~~~~---~-----~~~~p~~~~~~ 136 (312)
+|+++..... ..|+.++.+++++|++++ +++||+ |+ ||...... + .+..|..+|..
T Consensus 59 ~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~ 137 (315)
T d1e6ua_ 59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI 137 (315)
T ss_dssp EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred EEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHH
Confidence 9998765421 268999999999999999 999987 43 55322111 1 11112224555
Q ss_pred hHHHHHHHHH----HhCCCeEEEecccccccccccCCCCC------------ccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 137 DKMVVRKAIE----DAGIPFTYVSANCFAGYFLGGLCQPG------------SILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 137 ~K~~~e~~~~----~~~~~~~i~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
+|.++|+++. +.+++++++||+.++|+......... .....+..+.+.+++...+++++++|++
T Consensus 138 sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~ 217 (315)
T d1e6ua_ 138 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA 217 (315)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhH
Confidence 9999999886 35899999999999886322111100 0113456788888999999999999999
Q ss_pred HHHHHHhcCCc--------cCCceEEecCCCCcCCHHHHHHHHHHHhCCcceeecCC
Q 021470 201 MYTMKAINDPR--------TLNRTMYLRPPKNILSQREVVETWEKLIGKTLQKSSIS 249 (312)
Q Consensus 201 ~~~~~~l~~~~--------~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 249 (312)
+++..++.... .....+++. .+...++.++++.+.+.+|.+..+...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~~i~~~~ 273 (315)
T d1e6ua_ 218 AASIHVMELAHEVWLENTQPMLSHINVG-TGVDCTIRELAQTIAKVVGYKGRVVFDA 273 (315)
T ss_dssp HHHHHHHHSCHHHHHHTSBTTBCCEEES-CSCCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred HHHHHhhhhccccccccccccccccccC-CCcchHHHHHHHHHHHHhCCCcceEECC
Confidence 99999986542 123456665 4568999999999999999987765444
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=7.9e-27 Score=189.43 Aligned_cols=222 Identities=18% Similarity=0.150 Sum_probs=159.0
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCe--EEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHE--TYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.|++||||||||+||+++++.|+++|++ |++++|+ +++.. .+ ..+++++.+|+.+.+.+.++++++|+|
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~-----~~~~~---~~-~~~~~~~~~d~~~~~~~~~~~~~~d~v 72 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS-----AQGKE---KI-GGEADVFIGDITDADSINPAFQGIDAL 72 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESC-----HHHHH---HT-TCCTTEEECCTTSHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCC-----HHHHH---hc-cCCcEEEEeeeccccccccccccceee
Confidence 3789999999999999999999999965 6667787 55542 22 468999999999999999999999999
Q ss_pred EEcCCCCccc-----------------------cchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 80 ICAISGVHIR-----------------------SHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 80 ~~~~~~~~~~-----------------------~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
||+++..... ..|+.++++++..+.... .+++.+ |+.+...........+...+.
T Consensus 73 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 151 (252)
T d2q46a1 73 VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNIL 151 (252)
T ss_dssp EECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHH
T ss_pred EEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccccccccchh
Confidence 9999864411 145678899999999888 777665 433332211011111223444
Q ss_pred hhHHHHHHHHHHhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCccCCc
Q 021470 136 DDKMVVRKAIEDAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRTLNR 215 (312)
Q Consensus 136 ~~K~~~e~~~~~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~~~~ 215 (312)
..+...+.+....+++++++||+.++|+......... ..... ......++++++|+|++++.++++++..++
T Consensus 152 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~---~~~~~-----~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~ 223 (252)
T d2q46a1 152 VWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLV---GKDDE-----LLQTDTKTVPRADVAEVCIQALLFEEAKNK 223 (252)
T ss_dssp HHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEE---ESTTG-----GGGSSCCEEEHHHHHHHHHHHTTCGGGTTE
T ss_pred hhhhhhhhhhhcccccceeecceEEECCCcchhhhhh---ccCcc-----cccCCCCeEEHHHHHHHHHHHhCCccccCc
Confidence 4777778888889999999999999987432111100 00000 113345799999999999999999988889
Q ss_pred eEEecCCC--CcCCHHHHHHHHHHHhCC
Q 021470 216 TMYLRPPK--NILSQREVVETWEKLIGK 241 (312)
Q Consensus 216 ~~~~~~~~--~~~s~~e~~~~~~~~~g~ 241 (312)
+|+++++. ...+++|+.+.++++.++
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~lf~~i~~r 251 (252)
T d2q46a1 224 AFDLGSKPEGTSTPTKDFKALFSQVTSR 251 (252)
T ss_dssp EEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred EEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence 99997543 346778888888766543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.93 E-value=9.1e-26 Score=193.23 Aligned_cols=243 Identities=14% Similarity=0.070 Sum_probs=170.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.|||||||||||||++|++.|+++|++|++++|+..+. +...+.. ....+++++++|++|++.+.++++ .+|+|+
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~ 84 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTV-PSLFETA--RVADGMQSEIGDIRDQNKLLESIREFQPEIVF 84 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSS-SCHHHHT--TTTTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcc-HHHHhhh--hcccCCeEEEeeccChHhhhhhhhhchhhhhh
Confidence 37999999999999999999999999999999986554 2111111 114579999999999999999887 579999
Q ss_pred EcCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCCCC----CCcc----cccccCCCCCchhhhHHHHH
Q 021470 81 CAISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSEFG----TDPA----KMANAMEPGRVTFDDKMVVR 142 (312)
Q Consensus 81 ~~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~~g----~~~~----~~~~~~~p~~~~~~~K~~~e 142 (312)
|+++..... ..|+.++.+++++|++.+..+.+++++.+ .... ..+.+..|..+|...|...|
T Consensus 85 ~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e 164 (356)
T d1rkxa_ 85 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE 164 (356)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred hhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence 999876431 26888999999999998744555543211 1110 11344556666666888887
Q ss_pred HHHHH-------------hCCCeEEEecccccccccccCCCC---CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 143 KAIED-------------AGIPFTYVSANCFAGYFLGGLCQP---GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 143 ~~~~~-------------~~~~~~i~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
..+.. .++.++++||+.++|+.-...... ......++...+++.+++.++++|++|++.++..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~ 244 (356)
T d1rkxa_ 165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL 244 (356)
T ss_dssp HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhh
Confidence 66642 467889999998887532111100 00112344555678888999999999999999988
Q ss_pred hcCCcc----CCceEE-ecCCCCcCCHHHHHHHHHHHhCCcceeecC
Q 021470 207 INDPRT----LNRTMY-LRPPKNILSQREVVETWEKLIGKTLQKSSI 248 (312)
Q Consensus 207 l~~~~~----~~~~~~-~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~ 248 (312)
+..+.. .+...+ ..+.++.++..++++.+.+.+|.+.++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 291 (356)
T d1rkxa_ 245 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLD 291 (356)
T ss_dssp HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-
T ss_pred hhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEc
Confidence 875422 122222 223456789999999999999988766543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=7.3e-24 Score=167.98 Aligned_cols=180 Identities=17% Similarity=0.191 Sum_probs=126.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v 79 (312)
.++|||||||||||++++++|+++|+ +|++++|+.... ... +..+..|..++...+. ++|+|
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~---~~~~~~d~~~~~~~~~~~~d~v 66 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPR---LDNPVGPLAELLPQLDGSIDTA 66 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTT---EECCBSCHHHHGGGCCSCCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------ccc---ccccccchhhhhhccccchhee
Confidence 58999999999999999999999997 677777763221 112 3445555555555444 68999
Q ss_pred EEcCCCCcc--------ccchhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHHhCC
Q 021470 80 ICAISGVHI--------RSHQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIEDAGI 150 (312)
Q Consensus 80 ~~~~~~~~~--------~~~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~~~~ 150 (312)
||+++.... ...|+..+.+++++|++.+ ++++++ |+.+..... ...|..+|..+|+.+++.+.
T Consensus 67 i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~~-------~~~y~~~K~~~E~~l~~~~~ 138 (212)
T d2a35a1 67 FCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKS-------SIFYNRVKGELEQALQEQGW 138 (212)
T ss_dssp EECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTC-------SSHHHHHHHHHHHHHTTSCC
T ss_pred eeeeeeeccccccccccccchhhhhhhccccccccc-cccccccccccccccc-------ccchhHHHHHHhhhcccccc
Confidence 999886532 1267788999999999999 999987 776654332 24566699999999998887
Q ss_pred C-eEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 151 P-FTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 151 ~-~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
+ ++|+||+.++|+......... . ...+.... ...+.+|+++|+|++++.++.++.
T Consensus 139 ~~~~I~Rp~~v~G~~~~~~~~~~---~-~~~~~~~~--~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 139 PQLTIARPSLLFGPREEFRLAEI---L-AAPIARIL--PGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp SEEEEEECCSEESTTSCEEGGGG---T-TCCCC------CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ccceeeCCcceeCCcccccHHHH---H-HHHHhhcc--CCCCcEEEHHHHHHHHHHHHcCCC
Confidence 5 999999999986432111110 0 11111111 134567999999999999998875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.90 E-value=5.4e-24 Score=177.42 Aligned_cols=214 Identities=15% Similarity=0.099 Sum_probs=146.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
|||||||||||||++|++.|.++|+.|. +.++... +.+|+.|.+.+.++++ ++|+|||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~~~D~Vih 60 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE-------------------FCGDFSNPKGVAETVRKLRPDVIVN 60 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc-------------------ccCcCCCHHHHHHHHHHcCCCEEEE
Confidence 5899999999999999999999887554 4444211 2579999999999988 5699999
Q ss_pred cCCCCccc----------cchhHhHHHHHHHHHHhCCCceeecCC---CCCCcccc---cccCCCCCchhhhHHHHHHHH
Q 021470 82 AISGVHIR----------SHQILLQLKLVDAIKEAGNVKRFLPSE---FGTDPAKM---ANAMEPGRVTFDDKMVVRKAI 145 (312)
Q Consensus 82 ~~~~~~~~----------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~g~~~~~~---~~~~~p~~~~~~~K~~~e~~~ 145 (312)
+|+..... ..|+..+.+++++|++.+ ++.+++|+ ++.....+ +.+..|...|..+|..+|+.+
T Consensus 61 ~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~ 139 (298)
T d1n2sa_ 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKAL 139 (298)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred ecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhH
Confidence 99865421 257888999999999888 66555532 32222211 445556667777999999999
Q ss_pred HHhCCCeEEEeccccc-ccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC---CccCCceEEecC
Q 021470 146 EDAGIPFTYVSANCFA-GYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND---PRTLNRTMYLRP 221 (312)
Q Consensus 146 ~~~~~~~~i~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~---~~~~~~~~~~~~ 221 (312)
........++|++.++ +..................+... ++...+++++.|+++++..++.. .....++|++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~ 217 (298)
T d1n2sa_ 140 QDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA 217 (298)
T ss_dssp HHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC
T ss_pred HhhhcccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccC
Confidence 9877777777655443 22111100000001123333333 35678899999999998887752 233467888875
Q ss_pred CCCcCCHHHHHHHHHHHhCC
Q 021470 222 PKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 222 ~~~~~s~~e~~~~~~~~~g~ 241 (312)
+ +.++..|+++.+.+..+.
T Consensus 218 ~-~~~~~~~~~~~i~~~~~~ 236 (298)
T d1n2sa_ 218 G-GTTTWHDYAALVFDEARK 236 (298)
T ss_dssp B-SCEEHHHHHHHHHHHHHH
T ss_pred C-CceecHHHHHHHHhhhhc
Confidence 4 599999999998876653
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=3.6e-22 Score=166.90 Aligned_cols=222 Identities=15% Similarity=0.145 Sum_probs=137.0
Q ss_pred EEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHH-HH-----hccCCE
Q 021470 6 VLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLV-NA-----VKLVDV 78 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~-~~-----~~~~d~ 78 (312)
|||||||||||++|++.|+++|+ +|+++.+-.... +... +.... ..|..+.+.+. .. +..+++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~---~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT---KFVN---LVDLN----IADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG---GGHH---HHTSC----CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc---hhhc---ccccc----hhhhccchHHHHHHhhhhcccchhh
Confidence 89999999999999999999994 798886543322 1111 11111 12222222222 22 236899
Q ss_pred EEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceeecCC---C-CCCcc--cccccCCCCCchhhhHHHHHHH
Q 021470 79 VICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFLPSE---F-GTDPA--KMANAMEPGRVTFDDKMVVRKA 144 (312)
Q Consensus 79 v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v~S~---~-g~~~~--~~~~~~~p~~~~~~~K~~~e~~ 144 (312)
|+|+++..... ..++..+.+++++++..+ ++.+++|+ + +.... ..+.+..|...|..+|...|.+
T Consensus 72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~ 150 (307)
T d1eq2a_ 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY 150 (307)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred hhhhccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccchhhhh
Confidence 99998765432 255778999999999999 88777632 2 11111 1134445666677799999988
Q ss_pred HHH----hCCCeEEEecccccccccccCCCCC-c------cCCCCC-eeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 145 IED----AGIPFTYVSANCFAGYFLGGLCQPG-S------ILPSKD-SVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 145 ~~~----~~~~~~i~r~~~~~~~~~~~~~~~~-~------~~~~~~-~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
++. .+++++++||..++|+......... . ....++ .....+++...++++|++|+++++..++.++.
T Consensus 151 ~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~- 229 (307)
T d1eq2a_ 151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV- 229 (307)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-
T ss_pred ccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-
Confidence 875 5899999999988886432111000 0 001222 23345677788999999999999999988763
Q ss_pred CCceEEecCCCCcCCHHHHHHHHHHHhCC
Q 021470 213 LNRTMYLRPPKNILSQREVVETWEKLIGK 241 (312)
Q Consensus 213 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 241 (312)
.+.|++. .++..|++|+++++.+..+.
T Consensus 230 -~~~~~~~-~~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 230 -SGIFNLG-TGRAESFQAVADATLAYHKK 256 (307)
T ss_dssp -CEEEEES-CSCCBCHHHHHHHC------
T ss_pred -ccccccc-cccchhHHHHHHHHHHhcCC
Confidence 4678886 45699999999999877653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=1.2e-15 Score=121.84 Aligned_cols=194 Identities=13% Similarity=0.080 Sum_probs=131.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ +++.+.+..--..++..+++|++|+++++++++ +
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 6 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDIL-----DEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999999999998 666543322224568889999999988888765 6
Q ss_pred CCEEEEcCCCCcccc--------------chhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc-hh
Q 021470 76 VDVVICAISGVHIRS--------------HQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV-TF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~-~~ 135 (312)
+|+++|+++...... .|+.+...+.+ ..++.+ -.++|. |+...... .|... |.
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~------~~~~~~Y~ 153 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAG------TVACHGYT 153 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------CTTBHHHH
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccc------cccccchh
Confidence 899999999765321 45555544444 444454 356665 44222111 11234 44
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..|.||.+........... ... .....+...+|+|++++.++.
T Consensus 154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~----~~~---------~pl~R~~~p~diA~~v~fL~s 220 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED----IFQ---------TALGRAAEPVEVSNLVVYLAS 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT----CSC---------CSSSSCBCHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH----HHh---------ccccCCCCHHHHHHHHHHHhC
Confidence 499998877663 578889999998876544322211 010 111236789999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
... ..|+.+.+.|
T Consensus 221 ~~s~~itG~~i~vDG 235 (244)
T d1nffa_ 221 DESSYSTGAEFVVDG 235 (244)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred hhhCCCcCCEEEECC
Confidence 542 2366777754
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.67 E-value=5.4e-15 Score=118.56 Aligned_cols=204 Identities=10% Similarity=0.015 Sum_probs=125.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|..|+++||||++.||+++++.|++.|++|.+.+|+.. .+.....+.+ ..++..+++|++|++++.++++
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~---~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA---PEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC---HHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch---HHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34588999999999999999999999999999999743 1122222222 4578899999999998888764
Q ss_pred -cCCEEEEcCCCCcccc--------------chhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc-
Q 021470 75 -LVDVVICAISGVHIRS--------------HQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV- 133 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~- 133 (312)
++|++||+++...... .|+.+...+.+ ..++.+ -.++|. ||...... .|...
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~------~~~~~~ 151 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLK------IEAYTH 151 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC------CSSCHH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhccc------Cccccc
Confidence 6899999999765321 45555444444 445555 356664 44222111 12234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|+++..|.||++............ .... ..........+...+|+|++++.+
T Consensus 152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~--~~~~~~~l~r~~~pedvA~~v~fL 225 (247)
T d2ew8a1 152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA----MFDV--LPNMLQAIPRLQVPLDLTGAAAFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CTTSSSCSCCCTHHHHHHHHHH
T ss_pred chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch----hHHH--HHHHhccCCCCCCHHHHHHHHHHH
Confidence 44499998777653 5788899999987654332211110 0000 000001111356789999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.... -.|+.+.+.|
T Consensus 226 ~S~~s~~itG~~i~vDG 242 (247)
T d2ew8a1 226 ASDDASFITGQTLAVDG 242 (247)
T ss_dssp TSGGGTTCCSCEEEESS
T ss_pred hCchhcCCcCCeEEECC
Confidence 87543 2466777753
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.67 E-value=2.8e-15 Score=120.52 Aligned_cols=200 Identities=13% Similarity=-0.017 Sum_probs=129.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+....-....+..+++|++|+++++++++ +
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (254)
T d1hdca_ 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL-----DEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998 555543322224568899999999988888764 6
Q ss_pred CCEEEEcCCCCcccc--------------chhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCC-chh
Q 021470 76 VDVVICAISGVHIRS--------------HQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGR-VTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~-~~~ 135 (312)
+|++||+++...... .|+.+...+.+++ ++.+ -.++|. ||...... .|.. .|.
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~------~~~~~~Y~ 152 (254)
T d1hdca_ 80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMG------LALTSSYG 152 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------CTTCHHHH
T ss_pred ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhccc------ccchhhHH
Confidence 899999998765321 5555555554444 4455 456665 44332211 1123 444
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..|.||++............. .......+ ..+--+..+|+|.+++.++.
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~p------l~R~g~~PedvA~~v~fL~S 225 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG-EGNYPNTP------MGRVGNEPGEIAGAVVKLLS 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS-TTSCTTST------TSSCB-CHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHH-HHHHhCCC------CCCCCCCHHHHHHHHHHHhc
Confidence 499998877653 57889999999886543322111100 00000000 01112357999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
+.. -.|+.+.+.|
T Consensus 226 ~~a~~itG~~i~vDG 240 (254)
T d1hdca_ 226 DTSSYVTGAELAVDG 240 (254)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred hhhCCCCCceEEeCC
Confidence 542 2467777754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=3.1e-15 Score=119.79 Aligned_cols=200 Identities=13% Similarity=0.151 Sum_probs=129.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.... ...++..+.+|++|+++++++++ ++|++
T Consensus 7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~-----~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil 80 (244)
T d1pr9a_ 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRT-----QADLDSLVR-ECPGIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence 4799999999999999999999999999999998 555543222 13478999999999999999886 68999
Q ss_pred EEcCCCCcccc--------------chhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCCCCCchh-hhH
Q 021470 80 ICAISGVHIRS--------------HQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAMEPGRVTF-DDK 138 (312)
Q Consensus 80 ~~~~~~~~~~~--------------~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~~-~~K 138 (312)
||+++...... .|+.....+.+++.. .+.-.++|. |+ .+... .|....| .+|
T Consensus 81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------~~~~~~Y~asK 153 (244)
T d1pr9a_ 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-------VTNHSVYCSTK 153 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-------CTTBHHHHHHH
T ss_pred EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-------ccchhhhhhhH
Confidence 99998765321 455555444444332 221345554 43 33221 1223444 499
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .++++..|.||.+..+......... ..............+...+|+|+++..++.+..
T Consensus 154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~------~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a 227 (244)
T d1pr9a_ 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP------HKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSH------HHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccCh------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 998877653 5788999999988765433221100 000000001111246789999999999987543
Q ss_pred --cCCceEEecC
Q 021470 212 --TLNRTMYLRP 221 (312)
Q Consensus 212 --~~~~~~~~~~ 221 (312)
..|+.+.+.|
T Consensus 228 ~~itG~~i~vDG 239 (244)
T d1pr9a_ 228 GMTTGSTLPVEG 239 (244)
T ss_dssp TTCCSCEEEEST
T ss_pred CCcCCcEEEECc
Confidence 2356666653
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=4.5e-16 Score=124.58 Aligned_cols=200 Identities=12% Similarity=0.063 Sum_probs=132.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.+...-..+...+++|++|+++++++++ +
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATS-----ENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGE 78 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence 5789999999999999999999999999999998 666544333224567889999999988888765 6
Q ss_pred CCEEEEcCCCCcccc--------------chhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIRS--------------HQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++...... .|+.....+.+++ ++.+ -.++|. ||..... +......|..
T Consensus 79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~-----~~~~~~~Y~a 152 (243)
T d1q7ba_ 79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTM-----GNGGQANYAA 152 (243)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-----CCTTCHHHHH
T ss_pred cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcC-----CCCCCHHHHH
Confidence 899999998765321 5566655555544 4444 356665 4422111 1111234545
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. +|+++..|.||.+............ ... .........+...+|+|+++..++.+
T Consensus 153 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~-------~~~-~~~~~pl~R~~~pedvA~~v~fL~S~ 224 (243)
T d1q7ba_ 153 AKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQ-------RAG-ILAQVPAGRLGGAQEIANAVAFLASD 224 (243)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH-------HHH-HHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhH-------HHH-HHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 99998877663 5788999999988654332221100 000 00011112356899999999999975
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..|+.+.+.|
T Consensus 225 ~s~~itGq~i~vdG 238 (243)
T d1q7ba_ 225 EAAYITGETLHVNG 238 (243)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCcCCeEEECC
Confidence 43 2467777754
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.66 E-value=1.1e-15 Score=123.69 Aligned_cols=209 Identities=11% Similarity=0.092 Sum_probs=127.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-h---hhccCCCeEEEccCCCHHHHHHHhc---
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-L---SFKEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~---~l~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
..|+++||||++.||+++++.|+++|++|.+..|+. .++.+.. + .....++..+++|++|++++.++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~----~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD----AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC----HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc----HHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 368899999999999999999999999999999973 2222211 1 2224578889999999998888775
Q ss_pred ----cCCEEEEcCCCCcccc--------------chhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIRS--------------HQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~--------------~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+++...... .|+.+.. .++...++.+ -.++|. |+...... .|.
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~------~~~ 151 (260)
T d1x1ta1 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVA------SAN 151 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC------CTT
T ss_pred HHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceec------cCC
Confidence 5899999999765321 4555544 4455555555 456664 44322111 122
Q ss_pred C-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccC----CCCCeeEEeCCCCcceeeeeHHHH
Q 021470 132 R-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSIL----PSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 132 ~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
. .|..+|..++.+.+. .|+.+..|.||++-.............. ........+........+...+|+
T Consensus 152 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi 231 (260)
T d1x1ta1 152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence 3 444499998877653 5788888999988655433222110000 000000000001112246789999
Q ss_pred HHHHHHHhcCCc--cCCceEEecC
Q 021470 200 AMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 200 a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
|++++.++.+.. -.|+.+.+.|
T Consensus 232 A~~v~fL~S~~a~~itG~~i~vDG 255 (260)
T d1x1ta1 232 GGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHhChhhCCCcCCEEEECc
Confidence 999999997542 2366777753
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.65 E-value=2.5e-15 Score=120.12 Aligned_cols=201 Identities=14% Similarity=0.171 Sum_probs=130.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+ .++...+.. ...++..+.+|++|+++++++++ ++|++
T Consensus 5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT-----NSDLVSLAK-ECPGIEPVCVDLGDWDATEKALGGIGPVDLL 78 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH-HSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHH-hcCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence 5899999999999999999999999999999998 555533222 13578999999999999999887 68999
Q ss_pred EEcCCCCcccc--------------chhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh-hHH
Q 021470 80 ICAISGVHIRS--------------HQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD-DKM 139 (312)
Q Consensus 80 ~~~~~~~~~~~--------------~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~-~K~ 139 (312)
||+++...... .|+.....+.+++.. .+.-.++|. |+...... .|....|. +|.
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~------~~~~~~Y~asKa 152 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT------FPNLITYSSTKG 152 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC------CTTBHHHHHHHH
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc------CCccccccchHH
Confidence 99998754321 456666665554432 221235554 44322111 12234444 999
Q ss_pred HHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-
Q 021470 140 VVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR- 211 (312)
Q Consensus 140 ~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~- 211 (312)
.++.+.+. .|+++..|.||++..++........ ..............+...+|+|+++..++.+..
T Consensus 153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~ 226 (242)
T d1cyda_ 153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP------EFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 226 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH------HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH------HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence 98877763 5788999999988655432211100 000000000111235689999999999986542
Q ss_pred -cCCceEEecC
Q 021470 212 -TLNRTMYLRP 221 (312)
Q Consensus 212 -~~~~~~~~~~ 221 (312)
..|+.+.+.|
T Consensus 227 ~itG~~i~vDG 237 (242)
T d1cyda_ 227 STSGGGILVDA 237 (242)
T ss_dssp TCCSSEEEEST
T ss_pred CcCCceEEeCc
Confidence 2366777753
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=3.5e-15 Score=119.24 Aligned_cols=197 Identities=11% Similarity=-0.006 Sum_probs=129.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+ .++.+.. ....+++.+++|++|+++++++++ +
T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIE-----EGPLREA--AEAVGAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHH--HHTTTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHH--HHHcCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999998 5555322 234578899999999999888765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.+...+.+++.. .+ -..++. |+.+.. +......|..
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~~~------~~~~~~~Y~a 150 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYL------GNLGQANYAA 150 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGG------CCTTCHHHHH
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeecccccc------CCCCCcchHH
Confidence 89999999975432 1566666666655543 33 333443 442211 1112234555
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..|.||.+............ ... .........+...+|+|+++..++.+
T Consensus 151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~-------~~~-~~~~~pl~R~~~pedia~~v~fL~S~ 222 (242)
T d1ulsa_ 151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKV-------REK-AIAATPLGRAGKPLEVAYAALFLLSD 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHH-------HHH-HHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHH-------HHH-HHhcCCCCCCCCHHHHHHHHHHHhch
Confidence 99998877653 5788999999988654332211100 000 00001112356799999999999875
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. -.|+.+.+.|
T Consensus 223 ~s~~itG~~i~vDG 236 (242)
T d1ulsa_ 223 ESSFITGQVLFVDG 236 (242)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhCCCCCcEEEECC
Confidence 43 2466777754
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=9.6e-16 Score=123.22 Aligned_cols=203 Identities=10% Similarity=0.090 Sum_probs=130.0
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc--
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
|..|+++||||++.||+++++.|+++|++|.+.+|+ .++... .+.+ ...++..+++|++|++++.++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 77 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN-----LEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 77 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHH
Confidence 346899999999999999999999999999999998 444322 1222 13467889999999988888765
Q ss_pred -----cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHH----hCCCceeec-CC-CCCCcccccccCC
Q 021470 75 -----LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKE----AGNVKRFLP-SE-FGTDPAKMANAME 129 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~----~~~v~~~v~-S~-~g~~~~~~~~~~~ 129 (312)
++|++||+++...... .|+.+...+.+++.. .+ -.++|. ++ .+.... .
T Consensus 78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~------~ 150 (251)
T d1vl8a_ 78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT------M 150 (251)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC------S
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcccc------C
Confidence 6899999999754321 566665555555443 33 345554 43 232211 1
Q ss_pred CCCc-hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 130 PGRV-TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 130 p~~~-~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
+... |..+|..++.+.+. .|+++..|.||++............ ..............+..++|+|+
T Consensus 151 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~pl~R~~~pedvA~ 224 (251)
T d1vl8a_ 151 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP------EKLDYMLKRIPLGRTGVPEDLKG 224 (251)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH------HHHHHHHHTCTTSSCBCGGGGHH
T ss_pred ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH------HHHHHHHhcCCCCCCCCHHHHHH
Confidence 1233 44599998877653 5899999999988654332211100 00000000011123567899999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++.++.... ..|+.+.+.|
T Consensus 225 ~v~fL~S~~a~~itG~~i~vDG 246 (251)
T d1vl8a_ 225 VAVFLASEEAKYVTGQIIFVDG 246 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhCCCcCcEEEeCc
Confidence 9999987543 2366777753
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=2.3e-15 Score=120.66 Aligned_cols=202 Identities=12% Similarity=0.038 Sum_probs=128.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+..+ ..+...+++|++|+++++++++ +
T Consensus 5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~-----~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 76 (248)
T d2d1ya1 5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-----PEGKEVAE---AIGGAFFQVDLEDERERVRFVEEAAYALGR 76 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----TTHHHHHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999998 33332223 3367889999999988887765 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCc-hh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRV-TF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~-~~ 135 (312)
+|++||+|+..... +.|+.+...+.+++. +.+ -.++|. |+...... .|... |.
T Consensus 77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~------~~~~~~Y~ 149 (248)
T d2d1ya1 77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFA------EQENAAYN 149 (248)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSB------CTTBHHHH
T ss_pred CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccccc------ccccchhH
Confidence 89999999875432 156666655555554 334 346664 43222111 12234 44
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..|.||.+-.+.......... ........+.+......+...+|+|+++..++.
T Consensus 150 asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S 227 (248)
T d2d1ya1 150 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP--DPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 227 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC----------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCC--CHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 499998877653 57889999999876543221111000 000000001111112246689999999999987
Q ss_pred CCc--cCCceEEecC
Q 021470 209 DPR--TLNRTMYLRP 221 (312)
Q Consensus 209 ~~~--~~~~~~~~~~ 221 (312)
+.. ..|+.+.+.|
T Consensus 228 ~~s~~itG~~i~vDG 242 (248)
T d2d1ya1 228 EKASFITGAILPVDG 242 (248)
T ss_dssp GGGTTCCSCEEEEST
T ss_pred chhcCCCCcEEEcCc
Confidence 542 2366777754
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=5.9e-17 Score=130.86 Aligned_cols=209 Identities=11% Similarity=0.056 Sum_probs=129.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh----ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF----KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l----~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.|+++||||++.||+++++.|+++|++|.+++|+ .++.+.. ..+ ...++..+++|++|+++++++++
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN-----LEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 77 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5544322 222 23467889999999988888775
Q ss_pred ----cCCEEEEcCCCCcccc------chhHhHHHHHHHHH----HhC--CCceeec-CCCCCCcccccccCCCCCc-hhh
Q 021470 75 ----LVDVVICAISGVHIRS------HQILLQLKLVDAIK----EAG--NVKRFLP-SEFGTDPAKMANAMEPGRV-TFD 136 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~------~~~~~~~~l~~aa~----~~~--~v~~~v~-S~~g~~~~~~~~~~~p~~~-~~~ 136 (312)
++|++||+++.....+ .|+.....+..++. +.+ .-.++|. ||...... .|..+ |..
T Consensus 78 ~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~------~~~~~~Y~a 151 (254)
T d2gdza1 78 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP------VAQQPVYCA 151 (254)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------CTTCHHHHH
T ss_pred HHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC------CCCccchHH
Confidence 6899999999876432 45555544444443 322 0123554 44332111 12234 444
Q ss_pred hHHHHHHHHH---------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 137 DKMVVRKAIE---------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 137 ~K~~~e~~~~---------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
+|..++.+.+ ..|+++..|.||.+-..++..................+.+.-....+...+|+|++++.++
T Consensus 152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~ 231 (254)
T d2gdza1 152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 9988776543 2468888899998865443222110000000000000000000113567899999999999
Q ss_pred cCCccCCceEEecCC
Q 021470 208 NDPRTLNRTMYLRPP 222 (312)
Q Consensus 208 ~~~~~~~~~~~~~~~ 222 (312)
+++.-.|+.+.+.|.
T Consensus 232 s~~~itG~~i~VdGG 246 (254)
T d2gdza1 232 EDDALNGAIMKITTS 246 (254)
T ss_dssp HCTTCSSCEEEEETT
T ss_pred cCCCCCCCEEEECCC
Confidence 876555777777654
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.63 E-value=3.4e-15 Score=119.32 Aligned_cols=199 Identities=11% Similarity=0.066 Sum_probs=130.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|++.+|+ .++......--..++..+++|++++++++++++ +
T Consensus 5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~ 79 (241)
T d2a4ka1 5 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE-----ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGR 79 (241)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999998 555433222224567889999999999888765 5
Q ss_pred CCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHhCC-Cceee-cCCCCCCcccccccCCCCCchhh-hH
Q 021470 76 VDVVICAISGVHIRS--------------HQILLQLKLVDAIKEAGN-VKRFL-PSEFGTDPAKMANAMEPGRVTFD-DK 138 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~~~-v~~~v-~S~~g~~~~~~~~~~~p~~~~~~-~K 138 (312)
+|++||+++...... .|+.....+.+++...-. -+.++ .|+.+..... ....|. +|
T Consensus 80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~-------~~~~Y~~sK 152 (241)
T d2a4ka1 80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-------GLAHYAAGK 152 (241)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-------HHHHHHHCS
T ss_pred ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc-------Cccccchhh
Confidence 899999998654321 556666666666655431 12233 3443332211 133444 99
Q ss_pred HHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 139 MVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 139 ~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
..++.+.+. .|+++..|.||.+-.++...+... ...-.........+...+|+|+++..++.+..
T Consensus 153 ~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--------~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 153 LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW--------AWEQEVGASPLGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH--------HHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh--------HHHHHHhCCCCCCCcCHHHHHHHHHHHhcchh
Confidence 998887763 478899999998865543321110 00000001111246689999999999997542
Q ss_pred -c-CCceEEecC
Q 021470 212 -T-LNRTMYLRP 221 (312)
Q Consensus 212 -~-~~~~~~~~~ 221 (312)
+ .|+.+.+.|
T Consensus 225 ~~itG~~i~vDG 236 (241)
T d2a4ka1 225 AYITGQALYVDG 236 (241)
T ss_dssp TTCCSCEEEEST
T ss_pred CCCcCceEEeCC
Confidence 2 356777754
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.63 E-value=2.1e-15 Score=121.68 Aligned_cols=209 Identities=13% Similarity=0.124 Sum_probs=131.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+....--..++..+++|++|++++.++++ +
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 79 (256)
T d1k2wa_ 5 GKTALITGSARGIGRAFAEAYVREGARVAIADIN-----LEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGS 79 (256)
T ss_dssp TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC-----HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 4889999999999999999999999999999998 555543322225678899999999999888775 6
Q ss_pred CCEEEEcCCCCcccc--------------chhHhHHHHHHHHH----HhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIRS--------------HQILLQLKLVDAIK----EAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~----~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++...... .|+.+...+.+++. +.+.-.++|. |+...... .|..+.|.
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------~~~~~~Y~ 153 (256)
T d1k2wa_ 80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG------EALVGVYC 153 (256)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------CTTCHHHH
T ss_pred ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc------cccccchh
Confidence 899999999755321 56666555555433 2221345664 44332211 12344454
Q ss_pred -hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC--ccC-CCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 137 -DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG--SIL-PSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 137 -~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
+|..++.+.+. .|+++..|.||++-........... ... ........+........+...+|+|.+++.
T Consensus 154 asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~f 233 (256)
T d1k2wa_ 154 ATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99998877653 5788899999987654321110000 000 000000000000011235689999999999
Q ss_pred HhcCCc--cCCceEEecCC
Q 021470 206 AINDPR--TLNRTMYLRPP 222 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~~ 222 (312)
++.... -.|+.+.+.|.
T Consensus 234 L~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 234 LATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp TTSGGGTTCCSCEEEESTT
T ss_pred HhCchhCCccCceEEECcc
Confidence 886543 24677778653
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.63 E-value=1e-14 Score=118.57 Aligned_cols=204 Identities=14% Similarity=0.119 Sum_probs=130.1
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
..|+++||||++.||+++++.|+++|++|++++|+ .++.+.. +.+. ...+.++++|++|+++++++++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA-----DDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999998 5554422 3343 2357788999999998888775
Q ss_pred --cCCEEEEcCCCCccc----------------cchhHhHHHHHHHHH----HhCCCceeec-CC-CCCCcccccccCCC
Q 021470 75 --LVDVVICAISGVHIR----------------SHQILLQLKLVDAIK----EAGNVKRFLP-SE-FGTDPAKMANAMEP 130 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa~----~~~~v~~~v~-S~-~g~~~~~~~~~~~p 130 (312)
++|++||+++..... +.|+.+...+.+++. +.+ -.++|. |+ .+.... .+
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~------~~ 152 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAG------EG 152 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCC------TT
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccc------cc
Confidence 689999999864321 145555555555443 334 334443 33 332211 11
Q ss_pred CCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeC-CCCcceeeeeHHHHHH
Q 021470 131 GRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG-DGNPKAIYVDEDDIAM 201 (312)
Q Consensus 131 ~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~D~a~ 201 (312)
...+|. +|..++.+.+. .|+++..|.||.+..+......... ......... .......+...+|+|+
T Consensus 153 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~~~~~~~gr~~~pedvA~ 228 (268)
T d2bgka1 153 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD----SSRVEELAHQAANLKGTLLRAEDVAD 228 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC----HHHHHHHHHHTCSSCSCCCCHHHHHH
T ss_pred cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC----HHHHHHHHHhccccCCCCcCHHHHHH
Confidence 233455 89998877653 5788899999987655443222110 000000000 0011124668999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
+++.++.+.. -.|+.+.+.|
T Consensus 229 ~v~fL~S~~s~~itGq~i~VDG 250 (268)
T d2bgka1 229 AVAYLAGDESKYVSGLNLVIDG 250 (268)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhChhhCCccCceEEECc
Confidence 9999997543 2367777754
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.62 E-value=5.1e-15 Score=117.82 Aligned_cols=192 Identities=13% Similarity=0.031 Sum_probs=126.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|++.|++|.+..|+... ..++..+++|++|++++.++++ +
T Consensus 7 gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 73 (237)
T d1uzma1 7 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGP 73 (237)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999999998433 3467789999999988888765 5
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
+|++||+++..... +.|+.... .++...++.+ -.++|. |+....... .....|..
T Consensus 74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-----~~~~~Y~a 147 (237)
T d1uzma1 74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----GNQANYAA 147 (237)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------CCHHHHH
T ss_pred ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCC-----cccHHHHH
Confidence 89999999975421 14555544 4445555556 556765 443322211 11234444
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..|.||.+............ .. ..........+...+|+|+++..++..
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~---~~-----~~~~~~pl~R~~~pedvA~~v~fL~S~ 219 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERI---QQ-----GALQFIPAKRVGTPAEVAGVVSFLASE 219 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHH---HH-----HHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHH---HH-----HHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 5788889999988655433211100 00 000001112356899999999999875
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. -.|+.+.+.|
T Consensus 220 ~s~~itG~~i~vdG 233 (237)
T d1uzma1 220 DASYISGAVIPVDG 233 (237)
T ss_dssp GGTTCCSCEEEEST
T ss_pred hhcCCcCCeEEECC
Confidence 43 2366777753
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.61 E-value=1.8e-15 Score=122.12 Aligned_cols=205 Identities=14% Similarity=0.088 Sum_probs=128.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh----ccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF----KEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l----~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.. +.+ ...++..+++|++|++++.++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 78 (258)
T d1iy8a_ 4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS-----SEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT 78 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5554322 111 23367788999999998888764
Q ss_pred ----cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHI-R--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p 130 (312)
++|++||+++.... . +.|+.+...+.+++ ++.+ -.++|. ||...... .|
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~------~~ 151 (258)
T d1iy8a_ 79 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRG------IG 151 (258)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSB------CS
T ss_pred HHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccC------CC
Confidence 68999999985431 1 15666655555544 3344 345664 44332211 12
Q ss_pred CCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCC-C-eeEEeCCCCcceeeeeHHHHH
Q 021470 131 GRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSK-D-SVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 131 ~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~v~~~D~a 200 (312)
....|. +|..+..+.+. .|+++..|.||.+..+......... .... . ...-+........+...+|+|
T Consensus 152 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~~~pl~R~~~p~dvA 229 (258)
T d1iy8a_ 152 NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQL--DPENPRKAAEEFIQVNPSKRYGEAPEIA 229 (258)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHH--CTTCHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhc--CcccHHHHHHHHHhcCCCCCCcCHHHHH
Confidence 234444 99998777653 5899999999988654322110000 0000 0 000000111112356899999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.+++.++.... ..|+.+.+.|
T Consensus 230 ~~v~fL~S~~s~~itG~~i~VDG 252 (258)
T d1iy8a_ 230 AVVAFLLSDDASYVNATVVPIDG 252 (258)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCchhcCCcCceEEcCc
Confidence 99999987542 2366777754
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.61 E-value=8.3e-15 Score=117.80 Aligned_cols=203 Identities=12% Similarity=0.016 Sum_probs=127.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------- 74 (312)
..|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.+..--..+...+++|++|++++.++++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 79 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN-----EAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 35789999999999999999999999999999998 555543322224567889999999988887765
Q ss_pred cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCc-h
Q 021470 75 LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRV-T 134 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~-~ 134 (312)
++|++||+++...... .|+.....+++++.. .+ .++|. ||...... .|... |
T Consensus 80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~~~------~~~~~~Y 151 (253)
T d1hxha_ 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLP------IEQYAGY 151 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSC------CTTBHHH
T ss_pred CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CceecccchhhhcC------ccccccc
Confidence 6899999999754321 556555555555443 33 45664 44322111 12234 4
Q ss_pred hhhHHHHHHHHHH-------h--CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 135 FDDKMVVRKAIED-------A--GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~--~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
..+|..++.+.+. . ++++..|.||.+..+......... .......-.......-.+...+|+|++++.
T Consensus 152 ~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~gr~~~pedvA~~v~f 228 (253)
T d1hxha_ 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG---VSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT---CCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch---hhHHHHHhCccccccCCCCCHHHHHHHHHH
Confidence 4499887766542 2 477788999988654332211110 000000000000111246778999999999
Q ss_pred HhcCCc--cCCceEEec
Q 021470 206 AINDPR--TLNRTMYLR 220 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~ 220 (312)
++.+.. -.|+.+.+.
T Consensus 229 L~S~~s~~itG~~i~VD 245 (253)
T d1hxha_ 229 LASDESSVMSGSELHAD 245 (253)
T ss_dssp HHSGGGTTCCSCEEEES
T ss_pred HhChhhCCCcCcEEEEC
Confidence 987543 236667775
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.61 E-value=5.1e-15 Score=119.58 Aligned_cols=203 Identities=16% Similarity=0.098 Sum_probs=128.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|+++|++|.+..|+.. ++.+ ..+.+. ..++..+++|++|++++.++++
T Consensus 7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~----~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE----DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999732 2222 223333 2357789999999988888765
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++...... .|+.....+ +....+.+.-.+++. |+...... .|...
T Consensus 83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~------~~~~~ 156 (261)
T d1geea_ 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP------WPLFV 156 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------CTTCH
T ss_pred hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc------Ccccc
Confidence 6899999998765321 455554444 444444452233553 54332211 12344
Q ss_pred hhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 TFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 ~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
.|. +|..++.+.+. .|+++..|.||.+........... .. .............+...+|+|++++.
T Consensus 157 ~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~----~~--~~~~~~~~~pl~R~~~pediA~~v~f 230 (261)
T d1geea_ 157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD----PE--QRADVESMIPMGYIGEPEEIAAVAAW 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS----HH--HHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred ccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC----HH--HHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 444 99998877653 589999999998865433211000 00 00000000111235678999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++.+.. ..|+.+.+.|
T Consensus 231 L~S~~s~~itG~~i~vDG 248 (261)
T d1geea_ 231 LASSEASYVTGITLFADG 248 (261)
T ss_dssp HHSGGGTTCCSCEEEEST
T ss_pred HhCchhcCCcCCeEEECC
Confidence 987543 2467777764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=4e-14 Score=114.15 Aligned_cols=201 Identities=13% Similarity=0.145 Sum_probs=119.8
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..|+++||||++.||+++++.|++.|++|.+++|+ .++.+. .+.+. ..++..+.+|++|++++.++++
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN-----EYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999998 555432 22332 3467889999999988777653
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHH----HHHhCCCceeec-CC-CCCCcccccccCCC
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDA----IKEAGNVKRFLP-SE-FGTDPAKMANAMEP 130 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~-~g~~~~~~~~~~~p 130 (312)
.+|+++|+++..... +.|+.+...+.++ .++.+ -.++|. |+ .+.... ..
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~------~~ 154 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA------SV 154 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccc------cc
Confidence 379999999975421 1556665555444 44445 456665 43 332211 11
Q ss_pred CCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 131 GRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 131 ~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|..+|..++.+.+. .|+++..|.||.+............ .. ...........+...+|+|.++
T Consensus 155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~-----~~--~~~~~~~pl~R~~~pedvA~~v 227 (259)
T d1xq1a_ 155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE-----FK--KVVISRKPLGRFGEPEEVSSLV 227 (259)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHHH
T ss_pred cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH-----HH--HHHHhCCCCCCCcCHHHHHHHH
Confidence 23455599998877653 5899999999988654433221110 00 0000011112356789999999
Q ss_pred HHHhcCCc-c-CCceEEecC
Q 021470 204 MKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~~ 221 (312)
+.++.+.. + .|+.+.+.|
T Consensus 228 ~fL~S~~s~~iTG~~i~vDG 247 (259)
T d1xq1a_ 228 AFLCMPAASYITGQTICVDG 247 (259)
T ss_dssp HHHTSGGGTTCCSCEEECCC
T ss_pred HHHhCchhcCCcCcEEEeCC
Confidence 99986542 2 356666643
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.60 E-value=1.3e-14 Score=116.56 Aligned_cols=200 Identities=9% Similarity=0.048 Sum_probs=128.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|.++||||++.||+++++.|++.|++|.+.+|+ .++.+.. +.+.. .++..+++|++|++++.++++
T Consensus 10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 84 (251)
T d2c07a1 10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRT-----QKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 84 (251)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 5554322 33332 357889999999998888775
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++...... .|+.+...+.+ ..++.+ -.++|. ||..... +......
T Consensus 85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~-----~~~~~~~ 158 (251)
T d2c07a1 85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT-----GNVGQAN 158 (251)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----CCTTCHH
T ss_pred cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcC-----CCCCCHH
Confidence 6899999998755321 45555544444 444555 456765 4422111 1111234
Q ss_pred hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 134 TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 134 ~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|..+|..++.+.+. .|+++..|.||++........... ....+........+...+|+|++++.+
T Consensus 159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~--------~~~~~~~~~pl~R~~~pedvA~~v~fL 230 (251)
T d2c07a1 159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ--------IKKNIISNIPAGRMGTPEEVANLACFL 230 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH--------HHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH--------HHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 44599998877653 578899999998865433221110 000000111112366899999999999
Q ss_pred hcCCc-c-CCceEEecC
Q 021470 207 INDPR-T-LNRTMYLRP 221 (312)
Q Consensus 207 l~~~~-~-~~~~~~~~~ 221 (312)
+.+.. + .|+.+.+.|
T Consensus 231 ~S~~s~~itG~~i~vDG 247 (251)
T d2c07a1 231 SSDKSGYINGRVFVIDG 247 (251)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhCCCcCcEEEECC
Confidence 87543 2 366777753
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=2.7e-14 Score=117.38 Aligned_cols=202 Identities=12% Similarity=0.105 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-------cCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-------EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-------~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.|+++||||++.||+++++.|++.|++|++.+|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~-----~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRK-----LERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 5789999999999999999999999999999998 5554322 2221 2467889999999998888765
Q ss_pred -------cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccC
Q 021470 75 -------LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 -------~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|++||+++..... +.|+.+...+.+++.. .+ -..+|. |+-+.. .
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~-~------ 158 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKA-G------ 158 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTT-C------
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccccc-c------
Confidence 689999999865422 1566666666665543 33 234554 332211 1
Q ss_pred CCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHH
Q 021470 129 EPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 129 ~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.|....|. +|..++.+.+. .|+++..|.||.+..................... .......+...+|+|
T Consensus 159 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~----~~~plgR~g~pedvA 234 (297)
T d1yxma1 159 FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF----QKIPAKRIGVPEEVS 234 (297)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG----GGSTTSSCBCTHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHH----hcCCCCCCcCHHHHH
Confidence 22345554 99998877663 5788999999988644321111100000000000 000112356789999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.+++.++.+.. ..|+.+.+.|
T Consensus 235 ~~v~fL~Sd~s~~iTG~~i~VDG 257 (297)
T d1yxma1 235 SVVCFLLSPAASFITGQSVDVDG 257 (297)
T ss_dssp HHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCchhcCcCCcEEEeCc
Confidence 99999997542 2467777754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.60 E-value=5.8e-14 Score=111.89 Aligned_cols=179 Identities=12% Similarity=0.131 Sum_probs=120.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCe-------EEEEECCCCCCChHHHHHh-hhhcc--CCCeEEEccCCCHHHHHHHh
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHE-------TYVLHRPEIGVDIEKVQML-LSFKE--QGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~-~~l~~--~~~~~v~~D~~d~~~l~~~~ 73 (312)
+.|+||||++.||+++++.|++.|++ |....|+ .++.+.. +.+.. ..+..+++|++|++++.+++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~ 76 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT-----AADLEKISLECRAEGALTDTITADISDMADVRRLT 76 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC-----HHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCC-----HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence 45899999999999999999999987 8888888 5555322 33333 34678899999998888876
Q ss_pred c-------cCCEEEEcCCCCcccc--------------chhHhHHH----HHHHHHHhCCCceeec-CCCCCCccccccc
Q 021470 74 K-------LVDVVICAISGVHIRS--------------HQILLQLK----LVDAIKEAGNVKRFLP-SEFGTDPAKMANA 127 (312)
Q Consensus 74 ~-------~~d~v~~~~~~~~~~~--------------~~~~~~~~----l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~ 127 (312)
+ ++|++||+++...... .|+.+... ++...++.+ -.++|. |+......
T Consensus 77 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~----- 150 (240)
T d2bd0a1 77 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKA----- 150 (240)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----
T ss_pred HHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCC-----
Confidence 5 5899999999765321 55555444 444455555 346664 44322111
Q ss_pred CCCCCc-hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 128 MEPGRV-TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 128 ~~p~~~-~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
.|... |..+|..++.+.+. .|+++..+.||.+...+...... ..+..+...+|+
T Consensus 151 -~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~-----------------~~~~~~~~Pedv 212 (240)
T d2bd0a1 151 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-----------------EMQALMMMPEDI 212 (240)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-----------------TTGGGSBCHHHH
T ss_pred -CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH-----------------hhHhcCCCHHHH
Confidence 12334 44499888776653 57888889999876543322111 111234578999
Q ss_pred HHHHHHHhcCCc
Q 021470 200 AMYTMKAINDPR 211 (312)
Q Consensus 200 a~~~~~~l~~~~ 211 (312)
|++++.++.++.
T Consensus 213 A~~v~~l~s~~~ 224 (240)
T d2bd0a1 213 AAPVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHHTSCT
T ss_pred HHHHHHHHcCCc
Confidence 999999998764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.60 E-value=1.3e-14 Score=116.91 Aligned_cols=207 Identities=12% Similarity=0.090 Sum_probs=128.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|.++||||++.||+++++.|+++|++|.+.+|+ +++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYN-----DATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL 76 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 456999999999999999999999999999998 5555322 3333 3467889999999988888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+||..... +.|+.+...+++++ .+.+.-.+++. |+...... .|..+.
T Consensus 77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~------~~~~~~ 150 (255)
T d1gega_ 77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG------NPELAV 150 (255)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------CTTBHH
T ss_pred CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc------Cccccc
Confidence 689999999875422 15666666665554 33442344554 44332111 123455
Q ss_pred hh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC---ccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 135 FD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG---SILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 135 ~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
|. +|..++.+.+. .|+++..|.||.+..+......... ..........-+........+...+|+|+++
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v 230 (255)
T d1gega_ 151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 55 99998877653 5788999999987644321110000 0000000000000011112356799999999
Q ss_pred HHHhcCCc-c-CCceEEecC
Q 021470 204 MKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~~ 221 (312)
+.++.+.. + .|+.+.+.|
T Consensus 231 ~fL~S~~a~~itG~~i~vDG 250 (255)
T d1gega_ 231 SYLASPDSDYMTGQSLLIDG 250 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESS
T ss_pred HHHhCchhCCccCcEEEecC
Confidence 99987543 2 366677754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.59 E-value=2.7e-14 Score=115.14 Aligned_cols=205 Identities=10% Similarity=0.096 Sum_probs=126.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc----
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
..|+++||||++.||+++++.|+++|++|.+.+|+ +++.+.. +.+. ...+..+.+|++++++++++++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~ 79 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN-----EKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 79 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999998 5554322 3333 3456778999999988877653
Q ss_pred ----cCCEEEEcCCCCcccc--------------chhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIRS--------------HQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
..|+++|+++...... .|+.....+.+++ .+.+ ..++|+ |+...... .|.
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~------~~~ 152 (258)
T d1ae1a_ 80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSA------LPS 152 (258)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSC------CTT
T ss_pred HhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccc------ccc
Confidence 3799999998765321 4555554444444 3444 456664 43322111 123
Q ss_pred Cchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCe-eEEeCCCCcceeeeeHHHHHHH
Q 021470 132 RVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDS-VVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 132 ~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
...|. +|..++.+.+. .++++..|.||.+...+........ ..... ............+...+|+|.+
T Consensus 153 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~plgR~~~pediA~~ 229 (258)
T d1ae1a_ 153 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN---PHQKEEIDNFIVKTPMGRAGKPQEVSAL 229 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHSTTCSCBCHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh---hhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 44554 99998877763 5788889999988654433221110 00000 0000000111236789999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
+..++.+.. ..|+.+.+.|
T Consensus 230 v~fL~S~~s~~itG~~i~vDG 250 (258)
T d1ae1a_ 230 IAFLCFPAASYITGQIIWADG 250 (258)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhChhhCCCcCcEEEeCC
Confidence 999996542 2466777753
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.59 E-value=2.7e-14 Score=114.65 Aligned_cols=201 Identities=11% Similarity=0.070 Sum_probs=129.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-cCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+ .++.+.. +.+. ..++.++++|++|++++.++++
T Consensus 6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (251)
T d1zk4a1 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH-----SDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999998 5555432 2332 3468899999999988887765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH----hCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE----AGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~----~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++..... +.|+.+...+.+++.. .+.-.++|. |+...... .|....
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~------~~~~~~ 154 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG------DPSLGA 154 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC------CTTCHH
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc------CCCchh
Confidence 689999999876532 1566666666666543 331125554 44322111 123444
Q ss_pred hh-hHHHHHHHHH---------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 135 FD-DKMVVRKAIE---------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 135 ~~-~K~~~e~~~~---------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
|. +|..++.+.+ .+|+++..|.||.+................... ......+...+|+|.+++
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-------~~pl~R~~~pedvA~~v~ 227 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRT-------KTPMGHIGEPNDIAYICV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTT-------TCTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHh-------CCCCCCCcCHHHHHHHHH
Confidence 44 9988765543 246788889999886554332211100000000 011123568999999999
Q ss_pred HHhcCCc-c-CCceEEecC
Q 021470 205 KAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~-~-~~~~~~~~~ 221 (312)
.++.+.. + .|+.+.+.|
T Consensus 228 fL~S~~s~~itG~~i~vDG 246 (251)
T d1zk4a1 228 YLASNESKFATGSEFVVDG 246 (251)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhCCCcCcEEEECc
Confidence 9987543 2 366777753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.59 E-value=3.1e-14 Score=114.53 Aligned_cols=182 Identities=15% Similarity=0.109 Sum_probs=112.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
|++++|+||||++.||++++++|+++|+ +|++.+|+ .++.+.+......++.++++|++|.++++++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~-----~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 75 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD-----VEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS-----GGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCC-----HHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHH
Confidence 8889999999999999999999999994 78888898 444444455556789999999999988877653
Q ss_pred -----cCCEEEEcCCCCccc---------------cchhHhHHHHHHHH----HHhCC--C--------ceeec-CC-CC
Q 021470 75 -----LVDVVICAISGVHIR---------------SHQILLQLKLVDAI----KEAGN--V--------KRFLP-SE-FG 118 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa----~~~~~--v--------~~~v~-S~-~g 118 (312)
++|++||+||..... ++|+.+...+.+++ ++.+. . .+++. |+ .+
T Consensus 76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~ 155 (250)
T d1yo6a1 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence 389999999964321 14555555544443 33210 0 11221 11 11
Q ss_pred CCcccc-cccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcc
Q 021470 119 TDPAKM-ANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPK 190 (312)
Q Consensus 119 ~~~~~~-~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (312)
...... ..+..+...|..+|..+..+.+. .|+.+..+.||++-..+.. .
T Consensus 156 ~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-----------------------~ 212 (250)
T d1yo6a1 156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-----------------------K 212 (250)
T ss_dssp CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------
T ss_pred cccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC-----------------------C
Confidence 111100 11112223455599998766543 5788889999976533211 0
Q ss_pred eeeeeHHHHHHHHHHHhcCC
Q 021470 191 AIYVDEDDIAMYTMKAINDP 210 (312)
Q Consensus 191 ~~~v~~~D~a~~~~~~l~~~ 210 (312)
....+.++.++.++..+..+
T Consensus 213 ~~~~~~e~~a~~~~~~~~~~ 232 (250)
T d1yo6a1 213 NAALTVEQSTAELISSFNKL 232 (250)
T ss_dssp ------HHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcC
Confidence 12246788888888888754
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.58 E-value=1.9e-14 Score=116.36 Aligned_cols=210 Identities=10% Similarity=0.115 Sum_probs=127.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+.... .+..+.+......++..+++|++|++++.++++ +
T Consensus 9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA-VEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTH-HHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999986543 111111111124578899999999998888775 6
Q ss_pred CCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCC-CcccccccCCCCCc-h
Q 021470 76 VDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGT-DPAKMANAMEPGRV-T 134 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~-~~~~~~~~~~p~~~-~ 134 (312)
+|++||+++..... +.|+.+...+.+++ .+.+.-..++. ++... ..........|... |
T Consensus 88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y 167 (260)
T d1h5qa_ 88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFY 167 (260)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHH
T ss_pred CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccch
Confidence 89999999865422 14555554444443 33331233433 32211 11110000112234 4
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++..|.||.+............ . .. .........+...+|+|.+++.++
T Consensus 168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~---~--~~---~~~~~pl~R~g~pedvA~~v~fL~ 239 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKI---R--DH---QASNIPLNRFAQPEEMTGQAILLL 239 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHH---H--HH---HHHTCTTSSCBCGGGGHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHH---H--HH---HHhcCCCCCCcCHHHHHHHHHHHh
Confidence 4499998777653 5788899999988654333221100 0 00 000011123567999999999998
Q ss_pred cCCc--cCCceEEecC
Q 021470 208 NDPR--TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~--~~~~~~~~~~ 221 (312)
.+.. -.|+.+.+.|
T Consensus 240 S~~s~~itG~~i~VDG 255 (260)
T d1h5qa_ 240 SDHATYMTGGEYFIDG 255 (260)
T ss_dssp SGGGTTCCSCEEEECT
T ss_pred cchhCCCcCceEEECC
Confidence 7543 2366777754
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=1.4e-14 Score=116.58 Aligned_cols=200 Identities=12% Similarity=0.122 Sum_probs=129.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN-----ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5554322 3333 3467889999999988887764
Q ss_pred --cCCEEEEcCCCCccc-------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIR-------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~-------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+++|+++..... +.|+.+...+.++ .++.+ -.++|. |+...... .|....
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~------~~~~~~ 158 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENK------NINMTS 158 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCC------CTTCHH
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcc------cccccc
Confidence 689999999875421 1455555544444 44445 345553 44332111 123444
Q ss_pred hh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 135 FD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 135 ~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
|. +|..++.+.+. +|+++..|.||.+.............. .. .........+..++|+|++++.+
T Consensus 159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~----~~---~~~~~pl~R~g~pedvA~~v~fL 231 (255)
T d1fmca_ 159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIE----QK---MLQHTPIRRLGQPQDIANAALFL 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHH----HH---HHHTCSSCSCBCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHH----HH---HHhcCCCCCCcCHHHHHHHHHHH
Confidence 44 99998877653 578889999998865433221110000 00 00001112356789999999999
Q ss_pred hcCCc--cCCceEEecC
Q 021470 207 INDPR--TLNRTMYLRP 221 (312)
Q Consensus 207 l~~~~--~~~~~~~~~~ 221 (312)
+.+.. ..|+.+.+.|
T Consensus 232 ~S~~s~~itG~~i~vDG 248 (255)
T d1fmca_ 232 CSPAASWVSGQILTVSG 248 (255)
T ss_dssp HSGGGTTCCSCEEEEST
T ss_pred hCchhcCCcCCEEEECc
Confidence 87543 2467777764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.58 E-value=1e-14 Score=117.72 Aligned_cols=205 Identities=14% Similarity=0.107 Sum_probs=130.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
|.++||||++.||+++++.|+++|++|.+.+|+ .++.+. .+.+. ..++..+++|++|+++++++++
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARG-----EEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 77 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 567999999999999999999999999999998 555432 23333 3467889999999998888765
Q ss_pred -cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH------hCCCceeec-CC-CCCCcccccccCCCC
Q 021470 75 -LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE------AGNVKRFLP-SE-FGTDPAKMANAMEPG 131 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~------~~~v~~~v~-S~-~g~~~~~~~~~~~p~ 131 (312)
++|++||+|+..... +.|+.+...+.+++.. .+ -.++|. |+ .+.... |.
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~-------~~ 149 (257)
T d2rhca1 78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGV-------VH 149 (257)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCC-------TT
T ss_pred CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccccc-------cc
Confidence 589999999975432 1677777888777653 23 345554 33 332211 22
Q ss_pred Cc-hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCc--cCCC-CCeeEEeCCCCcceeeeeHHHHH
Q 021470 132 RV-TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGS--ILPS-KDSVVLLGDGNPKAIYVDEDDIA 200 (312)
Q Consensus 132 ~~-~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~v~~~D~a 200 (312)
.. |..+|..+..+.+. .|+++..|.||++-.+.......... .... ......+.......-+...+|+|
T Consensus 150 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia 229 (257)
T d2rhca1 150 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVA 229 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHH
Confidence 34 44499998877764 46778889999875432211100000 0000 00000000001112367899999
Q ss_pred HHHHHHhcCCc--cCCceEEecC
Q 021470 201 MYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 201 ~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++++.++.... ..|+.+.+.|
T Consensus 230 ~~v~fL~S~~s~~itG~~i~vDG 252 (257)
T d2rhca1 230 EMVAYLIGPGAAAVTAQALNVCG 252 (257)
T ss_dssp HHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHhCchhcCCcCceEEECc
Confidence 99999996542 2366777753
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.57 E-value=1.8e-14 Score=116.35 Aligned_cols=203 Identities=13% Similarity=0.112 Sum_probs=128.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhhcc--CCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSFKE--QGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l~~--~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+. .+.+.. .++..+++|++|++++.++++
T Consensus 8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN-----QKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 555432 233333 356788999999988877653
Q ss_pred ---cCCEEEEcCCCCccc--------------cchhHhHHHHHHHH----HHhCCCceeec-CC-CCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIR--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SE-FGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~ 131 (312)
.+|+++|+++..... +.|+.....+.+++ ++.+ -.++|. |+ .+... .|.
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~-------~~~ 154 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALA-------VPY 154 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSC-------CTT
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccc-------ccc
Confidence 379999999975432 15566555555544 4444 346664 44 33221 123
Q ss_pred Cchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 132 RVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
...|. +|..++.+.+. .++++..|.||.+............. ......-.........+...+|+|+++
T Consensus 155 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~~~~~~~~pl~R~g~pedvA~~v 231 (259)
T d2ae2a_ 155 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPE---QKENLNKLIDRCALRRMGEPKELAAMV 231 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHH---HHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchh---hHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 44454 99998877663 57888899999886543322111000 000000000001112356789999999
Q ss_pred HHHhcCCc-c-CCceEEecC
Q 021470 204 MKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 204 ~~~l~~~~-~-~~~~~~~~~ 221 (312)
+.++.... + .|+.+.+.|
T Consensus 232 ~fL~S~~s~~itG~~i~VDG 251 (259)
T d2ae2a_ 232 AFLCFPAASYVTGQIIYVDG 251 (259)
T ss_dssp HHHHSGGGTTCCSCEEEEST
T ss_pred HHHhCchhCCCcCcEEEECC
Confidence 99987543 2 366666653
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.57 E-value=4.8e-14 Score=112.11 Aligned_cols=197 Identities=17% Similarity=0.203 Sum_probs=125.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC-HHHHHHHhccCCEE
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND-YQSLVNAVKLVDVV 79 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d-~~~l~~~~~~~d~v 79 (312)
|..|+++||||++.||+++++.|+++|++|.+.+|+ .++. ...+.+.+.+|+++ .+.+.+.+.++|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~-----~~~l------~~~~~~~~~~Dv~~~~~~~~~~~g~iD~l 70 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----EELL------KRSGHRYVVCDLRKDLDLLFEKVKEVDIL 70 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHH------HHTCSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHH------HhcCCcEEEcchHHHHHHHHHHhCCCcEE
Confidence 456899999999999999999999999999999998 4443 34567889999976 45566666789999
Q ss_pred EEcCCCCcccc--------------chhHhHH----HHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHHH
Q 021470 80 ICAISGVHIRS--------------HQILLQL----KLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMV 140 (312)
Q Consensus 80 ~~~~~~~~~~~--------------~~~~~~~----~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~ 140 (312)
||+++...... .|+.... .++...++.+ -.++|. ++...... ......|..+|..
T Consensus 71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~-----~~~~~~Y~asKaa 144 (234)
T d1o5ia_ 71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISP-----IENLYTSNSARMA 144 (234)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC-----CTTBHHHHHHHHH
T ss_pred EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccc-----ccccccchhHHHH
Confidence 99998654211 4444444 4444445555 445554 43222111 1112234459999
Q ss_pred HHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--
Q 021470 141 VRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR-- 211 (312)
Q Consensus 141 ~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~-- 211 (312)
++.+.+. .|+++..|.||++............ .............+...+|+|.++..++.+..
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~-------~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~ 217 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE-------KKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY 217 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH-------HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHH-------HHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence 8766653 5788889999987654332211100 00000011111246789999999999987543
Q ss_pred cCCceEEecC
Q 021470 212 TLNRTMYLRP 221 (312)
Q Consensus 212 ~~~~~~~~~~ 221 (312)
-.|+.+.+.|
T Consensus 218 itG~~i~vDG 227 (234)
T d1o5ia_ 218 LTGQTIVVDG 227 (234)
T ss_dssp CCSCEEEEST
T ss_pred CcCcEEEECc
Confidence 2367777754
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.5e-14 Score=116.00 Aligned_cols=204 Identities=11% Similarity=0.068 Sum_probs=128.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.+... ..++..+++|++|+++++++++ +
T Consensus 6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~~~~~~~~-~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD-----ESGGRALEQE-LPGAVFILCDVTQEDDVKTLVSETIRRFGR 79 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHh-cCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999998 6665443322 3468899999999988888765 5
Q ss_pred CCEEEEcCCCCccc---------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCchh
Q 021470 76 VDVVICAISGVHIR---------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 76 ~d~v~~~~~~~~~~---------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~ 135 (312)
+|++||+++..... +.|+.+...+.++ .++.+ .++|. ||..... +......|.
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~-----~~~~~~~Y~ 152 (250)
T d1ydea1 80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAI-----GQAQAVPYV 152 (250)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHH-----CCTTCHHHH
T ss_pred CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCcccccccccc-----cccCcchhH
Confidence 89999999854311 1455554444444 44443 34554 4422111 111123455
Q ss_pred hhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhc
Q 021470 136 DDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIN 208 (312)
Q Consensus 136 ~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~ 208 (312)
.+|..++.+.+. .|+++..|.||++..+.......... .......-.........+...+|+|++++.++.
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S 230 (250)
T d1ydea1 153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP--DPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS 230 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSS--SHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCC--CHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 599998877653 58999999999886543322111100 000000000000111246689999999999886
Q ss_pred CCcc-CCceEEecC
Q 021470 209 DPRT-LNRTMYLRP 221 (312)
Q Consensus 209 ~~~~-~~~~~~~~~ 221 (312)
+..+ .|+.+.+.|
T Consensus 231 da~~itG~~i~vDG 244 (250)
T d1ydea1 231 EANFCTGIELLVTG 244 (250)
T ss_dssp HCTTCCSCEEEEST
T ss_pred ccCCCcCCeEEECC
Confidence 4333 356677754
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.56 E-value=3.9e-14 Score=115.38 Aligned_cols=209 Identities=13% Similarity=0.048 Sum_probs=131.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|+++|++|++++|+.. +..+ ..+.+. ...+..+++|++|++++.+.++
T Consensus 18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~----~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST----ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH----HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch----HHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999988732 2222 112222 3468889999999988888765
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHhCC---CceeecCCCCCCcccccccCCCCCchh
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKEAGN---VKRFLPSEFGTDPAKMANAMEPGRVTF 135 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~~~---v~~~v~S~~g~~~~~~~~~~~p~~~~~ 135 (312)
++|+++|+++...... .|+.....+.+++...=. -..++.|+.+.... .+....|
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~------~~~~~~Y 167 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------VPKHAVY 167 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS------CSSCHHH
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc------ccchhhH
Confidence 6899999998765321 566666666766665320 11233354443211 2234545
Q ss_pred h-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeE-----EeCCCCcceeeeeHHHHHHH
Q 021470 136 D-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV-----LLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 136 ~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~D~a~~ 202 (312)
. +|..++.+.+. .|+++..|.||.+-......+.............. ..........+...+|+|.+
T Consensus 168 ~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~ 247 (272)
T d1g0oa_ 168 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARV 247 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 4 99998877753 68999999999987553322111100000000000 00001111246789999999
Q ss_pred HHHHhcCCc--cCCceEEecC
Q 021470 203 TMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~--~~~~~~~~~~ 221 (312)
+..++.... -.|+.+.+.|
T Consensus 248 v~fL~s~~s~~itG~~i~vDG 268 (272)
T d1g0oa_ 248 VCFLASNDGGWVTGKVIGIDG 268 (272)
T ss_dssp HHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhCchhcCccCceEeECC
Confidence 999997543 2366677754
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.56 E-value=4.7e-14 Score=114.29 Aligned_cols=204 Identities=12% Similarity=0.117 Sum_probs=124.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc-----cCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK-----EQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~-----~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~ 79 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH-----AERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 79 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5554322 2232 2358899999999988888765
Q ss_pred -----cCCEEEEcCCCCccc------------------cchhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccc
Q 021470 75 -----LVDVVICAISGVHIR------------------SHQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~------------------~~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++|++||+++..... +.|+.....+.++ .++.+ -..++. |+.+....
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~---- 154 (264)
T d1spxa_ 80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA---- 154 (264)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC----
T ss_pred HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccccc----
Confidence 689999999864210 1455554444444 44443 234444 44332111
Q ss_pred cCCCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeE----EeCCCCcceeee
Q 021470 127 AMEPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVV----LLGDGNPKAIYV 194 (312)
Q Consensus 127 ~~~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v 194 (312)
.|..+.|. +|..++.+.+. .|+++..|.||.+...+........ ....... ..........+.
T Consensus 155 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~Pl~R~g 229 (264)
T d1spxa_ 155 --TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE---ETSKKFYSTMATMKECVPAGVMG 229 (264)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----------------HHHHHHHHHHCTTSSCB
T ss_pred --CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcH---HHHHHHHHHHHHHHhcCCCCCCc
Confidence 12345555 99998777653 5899999999987654332221110 0000000 000000112356
Q ss_pred eHHHHHHHHHHHhcCC--c-cCCceEEecC
Q 021470 195 DEDDIAMYTMKAINDP--R-TLNRTMYLRP 221 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~~--~-~~~~~~~~~~ 221 (312)
..+|+|++++.++.++ . -.|+.+.+.|
T Consensus 230 ~pedvA~~v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 230 QPQDIAEVIAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence 7899999999998754 2 2466777754
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.56 E-value=5.7e-14 Score=112.91 Aligned_cols=204 Identities=11% Similarity=0.012 Sum_probs=127.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCC-CHHHHHHHhc------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFN-DYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~-d~~~l~~~~~------ 74 (312)
.|+|+||||++.||+.++++|+++|.+|+++.|+... .+....+ ......++.++.+|++ +.+++.++++
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC--HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCccc--HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999887543 2223222 2223447888999997 6555655543
Q ss_pred -cCCEEEEcCCCCcccc------chhHhHHHHHHHHHHh------CCCceeec-CC-CCCCcccccccCCCCCchhhhHH
Q 021470 75 -LVDVVICAISGVHIRS------HQILLQLKLVDAIKEA------GNVKRFLP-SE-FGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~~------~~~~~~~~l~~aa~~~------~~v~~~v~-S~-~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
++|++|++|+...... +|+.++.++.+++... +.-.++|. |+ .+.... .....|..+|.
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------~~~~~Y~asKa 156 (254)
T d1sbya1 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------HQVPVYSASKA 156 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------TTSHHHHHHHH
T ss_pred CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------CCCHHHHHHHH
Confidence 6899999999876432 6777666666655442 11234654 33 332211 11234555999
Q ss_pred HHHHHHH-------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCcc
Q 021470 140 VVRKAIE-------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPRT 212 (312)
Q Consensus 140 ~~e~~~~-------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~~ 212 (312)
.+..+.+ ..++++..|.||++..+....+.... .........+ ...+....+++|++++.+++...
T Consensus 157 al~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~e~va~~~~~~~~~~~- 229 (254)
T d1sbya1 157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL--DVEPRVAELL----LSHPTQTSEQCGQNFVKAIEANK- 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG--GSCTTHHHHH----TTSCCEEHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccch--hHHHHHHhcc----ccCCCCCHHHHHHHHHHhhhCCC-
Confidence 8776654 36889999999998765433221110 0111100000 11245589999999988886553
Q ss_pred CCceEEecC
Q 021470 213 LNRTMYLRP 221 (312)
Q Consensus 213 ~~~~~~~~~ 221 (312)
-|.++.+.|
T Consensus 230 tG~vi~vdg 238 (254)
T d1sbya1 230 NGAIWKLDL 238 (254)
T ss_dssp TTCEEEEET
T ss_pred CCCEEEECC
Confidence 455666643
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.56 E-value=2.8e-14 Score=115.31 Aligned_cols=208 Identities=11% Similarity=-0.005 Sum_probs=129.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH-Hhhhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ-MLLSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||+|.||+++++.|+++|++|++..|+. .++.+ ..+.+. ..++..+++|++|+++++++++
T Consensus 6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~----~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSS----SKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCC----hHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999877763 22222 223333 3467889999999988888765
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHh----CCCceeecCCCCCCcccccccCCCCCch
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKEA----GNVKRFLPSEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~----~~v~~~v~S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|++||+++...... .|+.....+++++..+ + --.++.|+.+.... .|....
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g-~~iii~s~~~~~~~------~~~~~~ 154 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGG-RIILTSSIAAVMTG------IPNHAL 154 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEE-EEEEECCGGGTCCS------CCSCHH
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCC-cccccccccccccC------CCCchh
Confidence 6899999999765321 5566666666666543 2 11133344443211 223445
Q ss_pred hh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCC-ccCCCCCe----eEEeCCCCcceeeeeHHHHHH
Q 021470 135 FD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPG-SILPSKDS----VVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 135 ~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~v~~~D~a~ 201 (312)
|. +|..++.+.+. .|+++..|.||++............ ........ .....+......+...+|+|+
T Consensus 155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~ 234 (259)
T d1ja9a_ 155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR 234 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHH
Confidence 55 99998777653 5899999999998654321110000 00000000 000001111234678999999
Q ss_pred HHHHHhcCCc--cCCceEEecC
Q 021470 202 YTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 202 ~~~~~l~~~~--~~~~~~~~~~ 221 (312)
++..++.+.. -.|+.+.+.|
T Consensus 235 ~v~fL~S~~a~~itG~~i~vDG 256 (259)
T d1ja9a_ 235 AVSALCQEESEWINGQVIKLTG 256 (259)
T ss_dssp HHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhCchhcCCcCceEEeCC
Confidence 9999997653 2366666654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.55 E-value=9.8e-14 Score=113.02 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=125.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||+++++.|+++|++|.+++|+ +++.+.+..-...++..+.+|+++++++.++++ +
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~-----~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (276)
T d1bdba_ 5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKS-----AERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGK 79 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence 4799999999999999999999999999999998 666644333234678899999999988888764 6
Q ss_pred CCEEEEcCCCCccc-------------------cchhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 76 VDVVICAISGVHIR-------------------SHQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------------~~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
+|+++|+++..... ++|+.+...+ +...++.+ -..++. |+.+.... |.
T Consensus 80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~-------~~ 151 (276)
T d1bdba_ 80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN-------GG 151 (276)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT-------SS
T ss_pred cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC-------CC
Confidence 89999999854311 1344444444 44444444 233333 44443211 22
Q ss_pred Cchhh-hHHHHHHHHHH------hCCCeEEEecccccccccccCCCCC-ccCCCCCe-eEEeCCCCcceeeeeHHHHHHH
Q 021470 132 RVTFD-DKMVVRKAIED------AGIPFTYVSANCFAGYFLGGLCQPG-SILPSKDS-VVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 132 ~~~~~-~K~~~e~~~~~------~~~~~~i~r~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
.+.|. +|..++.+.+. .++++..|.||.+-.+......... ........ ...........-+...+|+|.+
T Consensus 152 ~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~ 231 (276)
T d1bdba_ 152 GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGA 231 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 34444 99998777653 2467777888887654332211100 00000000 0001111111235678999999
Q ss_pred HHHHhcCC--c-cCCceEEecC
Q 021470 203 TMKAINDP--R-TLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~--~-~~~~~~~~~~ 221 (312)
++.++..+ . -.|+.+.+.|
T Consensus 232 v~fL~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 232 YVFFATRGDAAPATGALLNYDG 253 (276)
T ss_dssp HHHHHCHHHHTTCSSCEEEESS
T ss_pred HHHHcCCcccCCeeCcEEEECc
Confidence 99888632 2 3467777753
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.55 E-value=2.4e-14 Score=114.42 Aligned_cols=200 Identities=11% Similarity=0.004 Sum_probs=125.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
+.|+||||++.||+++++.|+++|++|.+..++. .++.+.+ +.+. ..++..+++|++|++++.++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS----AKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999876542 3333222 2222 3467889999999988888765
Q ss_pred -cCCEEEEcCCCCcccc--------------chhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCCCch
Q 021470 75 -LVDVVICAISGVHIRS--------------HQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVT 134 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~~--------------~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~ 134 (312)
++|+++|+++...... .|+.....+ +...++.+ -.++|. ||..... +......|
T Consensus 78 g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~-----~~~~~~~Y 151 (244)
T d1edoa_ 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI-----GNIGQANY 151 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----CCTTCHHH
T ss_pred CCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcC-----CCCCCHHH
Confidence 6899999998765321 455554444 44444455 456765 5432211 11112344
Q ss_pred hhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHh
Q 021470 135 FDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAI 207 (312)
Q Consensus 135 ~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l 207 (312)
..+|..++.+.+. .|+++..|.||++..+......... ............+...+|+|+++..++
T Consensus 152 ~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~--------~~~~~~~~pl~R~~~p~dvA~~v~fLa 223 (244)
T d1edoa_ 152 AAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDM--------EKKILGTIPLGRTGQPENVAGLVEFLA 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHH--------HHHHHTSCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHH--------HHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 4599998877653 5788999999988654332211100 000000111123568999999999986
Q ss_pred cCCc---cCCceEEecC
Q 021470 208 NDPR---TLNRTMYLRP 221 (312)
Q Consensus 208 ~~~~---~~~~~~~~~~ 221 (312)
..++ -.|+.+.+.|
T Consensus 224 ~S~~a~~itG~~i~vdG 240 (244)
T d1edoa_ 224 LSPAASYITGQAFTIDG 240 (244)
T ss_dssp HCSGGGGCCSCEEEEST
T ss_pred CCchhcCCcCCeEEeCC
Confidence 4332 2366667653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.55 E-value=6.6e-14 Score=115.43 Aligned_cols=202 Identities=14% Similarity=0.080 Sum_probs=121.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH-hhhh---ccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM-LLSF---KEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~l---~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
|+++||||+|.||++++++|++.|++|++++|+ .++.+. .+.+ ....+..+++|++|.+++.++++
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~-----~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK-----MDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECC-----HHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 789999999999999999999999999999998 444321 1222 24567889999999998877654
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|+++|+++...... .|......+..+ ....+.-..++. ++.... ...|...
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~------~~~~~~~ 174 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE------TGSGFVV 174 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH------HCCTTCH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh------hcccccc
Confidence 6899999999765321 222222222222 122221223333 322111 1112234
Q ss_pred -hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHH
Q 021470 134 -TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMK 205 (312)
Q Consensus 134 -~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~ 205 (312)
|..+|..++.+.+. .|+++..|.||.+........... ......-.........+...+|+|.++..
T Consensus 175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~~~~~~~~~pl~R~~~pediA~~v~f 249 (294)
T d1w6ua_ 175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-----TGTFEKEMIGRIPCGRLGTVEELANLAAF 249 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-----TSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC-----cHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence 44499998877763 578899999998865443222111 00000000001111246688999999999
Q ss_pred HhcCCc--cCCceEEecC
Q 021470 206 AINDPR--TLNRTMYLRP 221 (312)
Q Consensus 206 ~l~~~~--~~~~~~~~~~ 221 (312)
++.+.. -.|+++.+.|
T Consensus 250 L~sd~s~~itG~~i~vDG 267 (294)
T d1w6ua_ 250 LCSDYASWINGAVIKFDG 267 (294)
T ss_dssp HTSGGGTTCCSCEEEEST
T ss_pred HhCchhcCCCCcEEEECC
Confidence 997643 2466777753
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.6e-13 Score=109.43 Aligned_cols=179 Identities=12% Similarity=0.103 Sum_probs=121.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.++++||||++.||++++++|+++|.+|.+.+|+ .++.+.. +.+. ..++..+.+|++|++++.++++
T Consensus 7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~-----~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN-----KHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 6655422 2232 3468899999999988888764
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHH----HHHHHHhCCCceeec-CCCCCCcccccccCCCCCc
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKL----VDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV 133 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l----~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~ 133 (312)
++|++||+++...... .|+.+...+ +...++.+ -.++|. |+....... |..+
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~------~~~~ 154 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV------PFLL 154 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH------HHHH
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCC------CCcH
Confidence 5899999999765321 455554444 44455555 456765 443332221 1234
Q ss_pred hhh-hHHHHHHHHHH----------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 134 TFD-DKMVVRKAIED----------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 134 ~~~-~K~~~e~~~~~----------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
.|. +|..+..+.+. .|+.++.+.||++-..+.... . .........+|+|+.
T Consensus 155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~-----------~-------~~~~~~~~pe~va~~ 216 (244)
T d1yb1a_ 155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----------S-------TSLGPTLEPEEVVNR 216 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----------H-------HHHCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc-----------C-------ccccCCCCHHHHHHH
Confidence 444 99997766543 257788899998754432210 0 011234568999999
Q ss_pred HHHHhcCCc
Q 021470 203 TMKAINDPR 211 (312)
Q Consensus 203 ~~~~l~~~~ 211 (312)
+...+..++
T Consensus 217 i~~~~~~~~ 225 (244)
T d1yb1a_ 217 LMHGILTEQ 225 (244)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCC
Confidence 988876653
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.53 E-value=1.6e-13 Score=110.97 Aligned_cols=189 Identities=15% Similarity=0.161 Sum_probs=124.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhcc--CCCeEEEccCCCHHHHHHHhc------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKE--QGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~--~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.+++||||+|.||++++++|+++|+ +|++++|+..+. ..-.+..+.+.. ..+.++.+|++|++++.++++
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~-~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDA-DGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGS-TTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCH-HHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 5899999999999999999999998 578788863332 111222233333 457889999999999998876
Q ss_pred cCCEEEEcCCCCcccc--------------chhHhHHHHHHHHHHhCCCceeec-CCCCCCcccccccCCCCCchhhhHH
Q 021470 75 LVDVVICAISGVHIRS--------------HQILLQLKLVDAIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
++|.|+|+++...... .|+.+..++.+++...+ ..++|. ||....... .....|..+|.
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~-----~~~~~YaAaka 162 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-----PGLGGYAPGNA 162 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-----TTCTTTHHHHH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCC-----cccHHHHHHHH
Confidence 4789999999765321 56777888888877766 667764 442211111 11234555998
Q ss_pred HHHHHHH---HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc
Q 021470 140 VVRKAIE---DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 140 ~~e~~~~---~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~ 211 (312)
.++.+.+ ..|++++.|.||.+.+..+...... .. +. ..-...+..+++++++..++..+.
T Consensus 163 ~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~-------~~---~~--~~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 163 YLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVA-------DR---FR--RHGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCBC----------------------CT--TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhCCCCEEECCCCcccCCccccchHH-------HH---HH--hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 8877655 4689999999998765432211000 00 00 111345789999999999998765
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.52 E-value=6.9e-14 Score=113.76 Aligned_cols=207 Identities=12% Similarity=0.103 Sum_probs=128.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-----CCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-----QGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-----~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+ .++.+.. +.+.. .++..+++|++|++++.++++
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 79 (272)
T d1xkqa_ 5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRS-----SERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 79 (272)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5554332 22322 347889999999988888765
Q ss_pred -----cCCEEEEcCCCCccc------------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccc
Q 021470 75 -----LVDVVICAISGVHIR------------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMAN 126 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~------------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~ 126 (312)
++|++||+++..... +.|+.....+.+++ ++.+ -..++. |+.+....
T Consensus 80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~---- 154 (272)
T d1xkqa_ 80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA---- 154 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC----
T ss_pred HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccC----
Confidence 689999999865321 14555554444444 3333 234444 43332211
Q ss_pred cCCCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCC-CCeeEEeCCCCcceeeeeHH
Q 021470 127 AMEPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPS-KDSVVLLGDGNPKAIYVDED 197 (312)
Q Consensus 127 ~~~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~ 197 (312)
.|....|. +|..++.+.+. .|+++..|.||++-..+............. ...............+...+
T Consensus 155 --~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 232 (272)
T d1xkqa_ 155 --QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 232 (272)
T ss_dssp --CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred --CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH
Confidence 12345555 99998777653 578999999998865443322111000000 00000000001112356899
Q ss_pred HHHHHHHHHhcCC--c-cCCceEEecC
Q 021470 198 DIAMYTMKAINDP--R-TLNRTMYLRP 221 (312)
Q Consensus 198 D~a~~~~~~l~~~--~-~~~~~~~~~~ 221 (312)
|+|++++.++..+ . -.|+.+.+.|
T Consensus 233 diA~~v~fL~S~~as~~iTG~~i~vDG 259 (272)
T d1xkqa_ 233 HIANIILFLADRNLSFYILGQSIVADG 259 (272)
T ss_dssp HHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred HHHHHHHHHhCcchhCCccCeEEEeCc
Confidence 9999999998643 2 2467777764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.52 E-value=1e-13 Score=111.96 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=127.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhc--cCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFK--EQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~--~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
.|+++||||++.||+++++.|++.|++|.+++|+ .++.+.. +.+. ..++..+++|++|++++.++++
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN-----REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998 5554322 2333 3367889999999988888765
Q ss_pred --cCCEEEEcCCCCcc-c--------------cchhHhHHHHHHHH----HHhCCCceeec-CC-CCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHI-R--------------SHQILLQLKLVDAI----KEAGNVKRFLP-SE-FGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~-~--------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~-~g~~~~~~~~~~~p~ 131 (312)
++|++||+++.... . +.|+.....+.+++ .+.+ -.++|. || .+... .|.
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~-------~~~ 151 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKG-------PPN 151 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSC-------CTT
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccC-------Ccc
Confidence 68999999986532 1 14555555555444 3344 346664 44 22211 122
Q ss_pred C-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCC-----CCccCCCCCee---EEeCCCCcceeeee
Q 021470 132 R-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQ-----PGSILPSKDSV---VLLGDGNPKAIYVD 195 (312)
Q Consensus 132 ~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~v~ 195 (312)
. .|..+|..++.+.+. .|+++..|.||.+...+...... .........+. ..+........+..
T Consensus 152 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ 231 (260)
T d1zema1 152 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD 231 (260)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcC
Confidence 3 444499998877653 57889999999886543211000 00000000000 00000011123567
Q ss_pred HHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 196 EDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
.+|+|.+++.++.+.. -.|+.+.+.|
T Consensus 232 pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 232 INEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp GGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred HHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 8999999999997542 2356666643
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=4.2e-13 Score=110.36 Aligned_cols=224 Identities=13% Similarity=0.081 Sum_probs=138.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCC----ChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGV----DIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.|+++||||++.||+++++.|+++|++|.+.+|+.... ..++.+ ..+.+. .......+|+.|.++++++++
T Consensus 7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHHHHHHH
Confidence 57899999999999999999999999999998764321 122222 223332 344556788888766555443
Q ss_pred ----cCCEEEEcCCCCcccc--------------chhHhHHHHHHH----HHHhCCCceeec-CCCCCCcccccccCCCC
Q 021470 75 ----LVDVVICAISGVHIRS--------------HQILLQLKLVDA----IKEAGNVKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~a----a~~~~~v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
++|++||+||...... +|+.+...+.++ .++.+ -.++|. ||...... .|.
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~------~~~ 158 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYG------NFG 158 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC------CTT
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCC------CCC
Confidence 6899999999765321 566665554444 54555 457775 44221111 122
Q ss_pred Cc-hhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHH
Q 021470 132 RV-TFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYT 203 (312)
Q Consensus 132 ~~-~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~ 203 (312)
.. |..+|..+..+.+. .|+++..|.||.+........ .+........+|+|.++
T Consensus 159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------------------~~~~~~~~~PedvA~~v 220 (302)
T d1gz6a_ 159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------------------PEDLVEALKPEYVAPLV 220 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------------------CHHHHHHSCGGGTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------------------cHhhHhcCCHHHHHHHH
Confidence 34 44499998877653 578888889986532211100 01122345679999999
Q ss_pred HHHhcCCcc-CCceEEecC------------------CCCcCCHHHHHHHHHHHhCCcceeecCCHHH
Q 021470 204 MKAINDPRT-LNRTMYLRP------------------PKNILSQREVVETWEKLIGKTLQKSSISKEE 252 (312)
Q Consensus 204 ~~~l~~~~~-~~~~~~~~~------------------~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 252 (312)
+.++..... .|+.+.+.| .+...|.+++++.+.++...+-.-.+.+..+
T Consensus 221 ~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~~~~p~~~~~ 288 (302)
T d1gz6a_ 221 LWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNASKPKSIQE 288 (302)
T ss_dssp HHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTCBCCCCHHH
T ss_pred HHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcccCcCCCCHHH
Confidence 998864322 234433321 1346788999999998887654444444443
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=9.2e-14 Score=111.93 Aligned_cols=191 Identities=15% Similarity=0.151 Sum_probs=119.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc----CCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE----QGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~----~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.|+++||||++.||+++++.|+++|++|++..|+ +++.+.+ +.+.. ..+..+++|++|++++.++++
T Consensus 10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 10 DRLALVTGASGGIGAAVARALVQQGLKVVGCART-----VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999998 5554432 33332 356788999999988888765
Q ss_pred ----cCCEEEEcCCCCcccc--------------chhHhHHHHHHH----HHHhCC-Cceeec-CC-CCCCcccccccCC
Q 021470 75 ----LVDVVICAISGVHIRS--------------HQILLQLKLVDA----IKEAGN-VKRFLP-SE-FGTDPAKMANAME 129 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~a----a~~~~~-v~~~v~-S~-~g~~~~~~~~~~~ 129 (312)
++|++||+++...... .|+.....+.++ .++.+. -.++|. |+ .+.... |.
T Consensus 85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----p~- 159 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL----PL- 159 (257)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC----SC-
T ss_pred HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC----CC-
Confidence 6899999998754321 455554444444 344331 135554 43 332111 11
Q ss_pred CCCc-hhhhHHHHHHHHH---------HhCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHH
Q 021470 130 PGRV-TFDDKMVVRKAIE---------DAGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 130 p~~~-~~~~K~~~e~~~~---------~~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
+... |..+|..+..+.+ ..++++..+.||.+-..+........ .. . .........+...+|+
T Consensus 160 ~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~---~~--~---~~~~~~~~r~~~pedv 231 (257)
T d1xg5a_ 160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD---PE--K---AAATYEQMKCLKPEDV 231 (257)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC---HH--H---HHHHHC---CBCHHHH
T ss_pred cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh---HH--H---HHhcCCCCCCcCHHHH
Confidence 1233 4449988776654 24677788889877654332221110 00 0 0000112346789999
Q ss_pred HHHHHHHhcCCc
Q 021470 200 AMYTMKAINDPR 211 (312)
Q Consensus 200 a~~~~~~l~~~~ 211 (312)
|+++..++.++.
T Consensus 232 A~~v~fL~s~~a 243 (257)
T d1xg5a_ 232 AEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHHhCChh
Confidence 999999998763
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.50 E-value=1.2e-13 Score=112.40 Aligned_cols=208 Identities=11% Similarity=0.105 Sum_probs=128.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhhcc-----CCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSFKE-----QGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l~~-----~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.|+++||||++.||+++++.|++.|++|.+.+|+ .++.+.. +.+.. .++..+++|++|++++.++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~-----~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (274)
T d1xhla_ 4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN-----EDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 78 (274)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence 5799999999999999999999999999999998 5554322 22322 357889999999988888765
Q ss_pred -----cCCEEEEcCCCCccc----------------cchhHhHHHHHHHH----HHhCCCceeec-CCCCCCcccccccC
Q 021470 75 -----LVDVVICAISGVHIR----------------SHQILLQLKLVDAI----KEAGNVKRFLP-SEFGTDPAKMANAM 128 (312)
Q Consensus 75 -----~~d~v~~~~~~~~~~----------------~~~~~~~~~l~~aa----~~~~~v~~~v~-S~~g~~~~~~~~~~ 128 (312)
++|+++|+++..... +.|+.....+.+++ ++.+ -.+++. |+.+....
T Consensus 79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~------ 151 (274)
T d1xhla_ 79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------ 151 (274)
T ss_dssp HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC------
T ss_pred HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhcccc------
Confidence 589999999854211 14555554444444 3444 345554 43332111
Q ss_pred CCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCC-CCeeEEeCCCCcceeeeeHHHH
Q 021470 129 EPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPS-KDSVVLLGDGNPKAIYVDEDDI 199 (312)
Q Consensus 129 ~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~D~ 199 (312)
.|..+.|. +|..++.+.+. .|+++..|.||.+..++............. ...............+...+|+
T Consensus 152 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi 231 (274)
T d1xhla_ 152 HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 231 (274)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence 12345555 99998877653 589999999999865433221110000000 0000000000011235679999
Q ss_pred HHHHHHHhcCC--c-cCCceEEecCC
Q 021470 200 AMYTMKAINDP--R-TLNRTMYLRPP 222 (312)
Q Consensus 200 a~~~~~~l~~~--~-~~~~~~~~~~~ 222 (312)
|++++.++..+ . -.|+.+.+.|.
T Consensus 232 A~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 232 ANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHHcCCccccCccCcEEEeCcC
Confidence 99999998632 3 24677777643
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.50 E-value=1.4e-13 Score=111.07 Aligned_cols=203 Identities=12% Similarity=0.068 Sum_probs=119.4
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------ 74 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------ 74 (312)
.|+++||||+| .||++++++|++.|++|.+..|+... .+.... ..........+++|++|+++++++++
T Consensus 8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~--~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERL--RPEAEK-LAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGG--HHHHHH-HHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHH--HHHHHH-hhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 57899999998 69999999999999999888887321 111111 11123467889999999988888764
Q ss_pred -cCCEEEEcCCCCccc------------------cchhHhHHHHHHHHHHhC-CCceeec-CC-CCCCcccccccCCCCC
Q 021470 75 -LVDVVICAISGVHIR------------------SHQILLQLKLVDAIKEAG-NVKRFLP-SE-FGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~------------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~-~g~~~~~~~~~~~p~~ 132 (312)
++|+++|+++..... +.|+.....+.+++...- .-.++|. |+ .+... .|..
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-------~~~~ 157 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-------VPKY 157 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-------CTTC
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-------CCCc
Confidence 589999999864310 133444455555543221 0023443 33 33211 1223
Q ss_pred chhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|. +|..++.+.+. .|+++..+.||.+............ ..............+...+|+|++++
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~------~~~~~~~~~~pl~R~~~pedvA~~v~ 231 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT------KMYDRVAQTAPLRRNITQEEVGNLGL 231 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH------HHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH------HHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 4444 99998877663 5889999999987644322111100 00000000001123567899999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.+.. -.|+.+.+.|
T Consensus 232 fL~S~~s~~itG~~i~VDG 250 (256)
T d1ulua_ 232 FLLSPLASGITGEVVYVDA 250 (256)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhCchhCCccCCeEEECc
Confidence 9997643 2466777754
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.49 E-value=2.2e-13 Score=109.35 Aligned_cols=154 Identities=16% Similarity=0.147 Sum_probs=98.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA---LGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
||+|+||||++.||++++++|++ .|++|++.+|+.... . ..+.+. -...++.++++|++|++++.++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~-~-~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-K-ELEDLA-KNHSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC-H-HHHHHH-HHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH-H-HHHHHH-hcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 57999999999999999999974 689999999985543 1 221111 124688999999999877776543
Q ss_pred ----cCCEEEEcCCCCccc---------------cchhHhHHHHHHHH----HHhC----------CCceeec--CCCCC
Q 021470 75 ----LVDVVICAISGVHIR---------------SHQILLQLKLVDAI----KEAG----------NVKRFLP--SEFGT 119 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa----~~~~----------~v~~~v~--S~~g~ 119 (312)
++|++||+++..... ++|+.+...+.+++ ++.. .-.++|. |..|.
T Consensus 79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~ 158 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 158 (248)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 489999999864321 14555544444443 3220 0123443 43333
Q ss_pred CcccccccCCCCC-chhhhHHHHHHHHH-------HhCCCeEEEeccccccc
Q 021470 120 DPAKMANAMEPGR-VTFDDKMVVRKAIE-------DAGIPFTYVSANCFAGY 163 (312)
Q Consensus 120 ~~~~~~~~~~p~~-~~~~~K~~~e~~~~-------~~~~~~~i~r~~~~~~~ 163 (312)
.... ..|.. .|..+|..+..+.+ ..++.+..+.||++-..
T Consensus 159 ~~~~----~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 159 IQGN----TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp STTC----CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cCCC----CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 2211 12223 45559998776654 25788999999987543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.7e-13 Score=108.34 Aligned_cols=204 Identities=13% Similarity=0.065 Sum_probs=128.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc---cCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK---LVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~---~~d~v 79 (312)
.|+++||||++.||+++++.|+++|++|++.+|+ +++.+.. .+..+++...+|+.+.+.+....+ ++|++
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~-----~~~l~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l 78 (245)
T d2ag5a1 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----ESKLQEL--EKYPGIQTRVLDVTKKKQIDQFANEVERLDVL 78 (245)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC-----HHHHGGG--GGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHH--HhccCCceeeeeccccccccccccccccceeE
Confidence 4789999999999999999999999999999998 6555322 234678888999988877666654 78999
Q ss_pred EEcCCCCcccc--------------chhHhHHHHHHHH----HHhCCCceeec-C-CCCCCcccccccCCCCCchhhhHH
Q 021470 80 ICAISGVHIRS--------------HQILLQLKLVDAI----KEAGNVKRFLP-S-EFGTDPAKMANAMEPGRVTFDDKM 139 (312)
Q Consensus 80 ~~~~~~~~~~~--------------~~~~~~~~l~~aa----~~~~~v~~~v~-S-~~g~~~~~~~~~~~p~~~~~~~K~ 139 (312)
+|+++...... .|+.....+.+++ .+.+ -.++|. | ..+.... ......|..+|.
T Consensus 79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~-----~~~~~~Y~~sKa 152 (245)
T d2ag5a1 79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG-----VVNRCVYSTTKA 152 (245)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC-----CTTBHHHHHHHH
T ss_pred EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCC-----ccchhHHHHHHH
Confidence 99999765321 4555555554444 3444 345554 4 4442211 112234555999
Q ss_pred HHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc-
Q 021470 140 VVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR- 211 (312)
Q Consensus 140 ~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~- 211 (312)
.++.+.+. .|+++..|.||.+-............ ........+........+...+|+|+++..++.+..
T Consensus 153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~ 230 (245)
T d2ag5a1 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG--NPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA 230 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS--SHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence 98887763 57889999999875443221100000 000000000000111246789999999999997643
Q ss_pred -cCCceEEecC
Q 021470 212 -TLNRTMYLRP 221 (312)
Q Consensus 212 -~~~~~~~~~~ 221 (312)
..|+.+.+.|
T Consensus 231 ~iTG~~i~VDG 241 (245)
T d2ag5a1 231 YVTGNPVIIDG 241 (245)
T ss_dssp TCCSCEEEECT
T ss_pred CCcCceEEeCC
Confidence 2466777753
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.45 E-value=4.3e-14 Score=113.68 Aligned_cols=202 Identities=8% Similarity=-0.023 Sum_probs=118.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh-------ccCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV-------KLVD 77 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~-------~~~d 77 (312)
+++||||++.||+.+++.|++.|++|.+.+|+. ++.+.++.+. ....++|+.|.+++.+++ .++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~-----~~~~~~~~~~---~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF-----KQKDELEAFA---ETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG-----GSHHHHHHHH---HHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHhhh---CcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999999999999999998873 3332222222 123356776665554443 3689
Q ss_pred EEEEcCCCCcc-c--------------cchhHhHHHHHH----HHHHhCCCceeec-CCCCCCcccccccCCCCCc-hhh
Q 021470 78 VVICAISGVHI-R--------------SHQILLQLKLVD----AIKEAGNVKRFLP-SEFGTDPAKMANAMEPGRV-TFD 136 (312)
Q Consensus 78 ~v~~~~~~~~~-~--------------~~~~~~~~~l~~----aa~~~~~v~~~v~-S~~g~~~~~~~~~~~p~~~-~~~ 136 (312)
++||+++.... . +.|+.....+++ ..++.+ -.++|. |+...... .|... |..
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~------~~~~~~Y~a 146 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGP------WKELSTYTS 146 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSC------CTTCHHHHH
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccc------ccccccccc
Confidence 99999875431 1 134444444444 444444 346664 44332211 12234 444
Q ss_pred hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcC
Q 021470 137 DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAIND 209 (312)
Q Consensus 137 ~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~ 209 (312)
+|..++.+.+. .|+++..|.||.+.......+.......................-+...+|+|.+++.++.+
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~ 226 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99998877653 58999999999886543332211000000000000000000111356899999999999976
Q ss_pred Cc--cCCceEEecC
Q 021470 210 PR--TLNRTMYLRP 221 (312)
Q Consensus 210 ~~--~~~~~~~~~~ 221 (312)
.. ..|+.+.+.|
T Consensus 227 ~s~~iTG~~i~vdG 240 (252)
T d1zmta1 227 SCDYLTGQVFWLAG 240 (252)
T ss_dssp SCGGGTTCEEEEST
T ss_pred hhcCCcCCeEEECC
Confidence 53 2367777754
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.1e-13 Score=111.47 Aligned_cols=208 Identities=14% Similarity=0.168 Sum_probs=121.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEE---ECCCCCCChHHHHHhhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVL---HRPEIGVDIEKVQMLLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~~~~~~~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
++.|+||||++.||+++++.|++.|.+|+.+ .|+.... ....+..+.+. ..++..+++|++|++++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~ 80 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ-GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT-HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhh-HHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence 4567899999999999999999999775554 4442111 11111222222 3468889999999999998875
Q ss_pred --cCCEEEEcCCCCcccc--------------chhHhHHHHHHH----HHHhCCCceeec-C-CCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIRS--------------HQILLQLKLVDA----IKEAGNVKRFLP-S-EFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~--------------~~~~~~~~l~~a----a~~~~~v~~~v~-S-~~g~~~~~~~~~~~p~~ 132 (312)
.+|+++|+++...... +|+.+..++.++ .++++ -.++|. | ..|.... |..
T Consensus 81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~-------~~~ 152 (285)
T d1jtva_ 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL-------PFN 152 (285)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC-------TTC
T ss_pred ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCC-------CCc
Confidence 5899999998765321 566665554444 45555 456664 4 3333211 234
Q ss_pred chhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeC---------CCCcceeeee
Q 021470 133 VTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG---------DGNPKAIYVD 195 (312)
Q Consensus 133 ~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~ 195 (312)
..|. +|..++.+.+. .|+++..|.||.+-.++..................... ..-.......
T Consensus 153 ~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T d1jtva_ 153 DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN 232 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCC
Confidence 4455 99998777653 58899999999886554432211100000000000000 0000112457
Q ss_pred HHHHHHHHHHHhcCCccCCceEEecC
Q 021470 196 EDDIAMYTMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 196 ~~D~a~~~~~~l~~~~~~~~~~~~~~ 221 (312)
.+|+|++++.+++.+... ..|++|
T Consensus 233 PeeVA~~v~~~~~~~~p~--~ry~~g 256 (285)
T d1jtva_ 233 PEEVAEVFLTALRAPKPT--LRYFTT 256 (285)
T ss_dssp HHHHHHHHHHHHHCSSCC--SEEESC
T ss_pred HHHHHHHHHHHHhCCCCC--eEEecH
Confidence 899999999999876422 346653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.39 E-value=5.3e-13 Score=107.78 Aligned_cols=197 Identities=10% Similarity=0.020 Sum_probs=122.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEECCCCCCChHHHHHh-hhhc----cCCCeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLA---LGHETYVLHRPEIGVDIEKVQML-LSFK----EQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~-~~l~----~~~~~~v~~D~~d~~~l~~~ 72 (312)
|..+.++||||++.||++++++|.+ +|++|++++|+ .++.+.+ +.+. ..++..+++|++|++++.++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~-----~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l 78 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS-----ESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRL 78 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC-----HHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECC-----HHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence 4467889999999999999999975 78999999998 5555432 2232 23578899999999888887
Q ss_pred hc-----------cCCEEEEcCCCCcc---c--------------cchhHhHHHHHHHHHHhC----C-Cceeec-CCCC
Q 021470 73 VK-----------LVDVVICAISGVHI---R--------------SHQILLQLKLVDAIKEAG----N-VKRFLP-SEFG 118 (312)
Q Consensus 73 ~~-----------~~d~v~~~~~~~~~---~--------------~~~~~~~~~l~~aa~~~~----~-v~~~v~-S~~g 118 (312)
++ ..|+++++++.... . +.|+.+...+.+++...= . -.++|. |+..
T Consensus 79 ~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~ 158 (259)
T d1oaaa_ 79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC 158 (259)
T ss_dssp HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred HHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccc
Confidence 63 35688998875321 0 156777777777776531 0 124554 4432
Q ss_pred CCcccccccCCCCCchhh-hHHHHHHHHHH-----hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCccee
Q 021470 119 TDPAKMANAMEPGRVTFD-DKMVVRKAIED-----AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAI 192 (312)
Q Consensus 119 ~~~~~~~~~~~p~~~~~~-~K~~~e~~~~~-----~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (312)
.... .|..+.|. +|..++.+.+. .++++..|.||.+...+........ ........+........
T Consensus 159 ~~~~------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~~~r 229 (259)
T d1oaaa_ 159 ALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETS---KDPELRSKLQKLKSDGA 229 (259)
T ss_dssp GTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHC---SCHHHHHHHHHHHHTTC
T ss_pred ccCC------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcC---CCHHHHHHHHhcCCCCC
Confidence 2111 12344455 99998877653 5778888999988755332111000 00000000000000113
Q ss_pred eeeHHHHHHHHHHHhcCCc
Q 021470 193 YVDEDDIAMYTMKAINDPR 211 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~~ 211 (312)
+..++|+|++++.++....
T Consensus 230 ~~~p~evA~~i~~ll~~~s 248 (259)
T d1oaaa_ 230 LVDCGTSAQKLLGLLQKDT 248 (259)
T ss_dssp SBCHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHhhhcc
Confidence 4678999999999987554
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=7.3e-12 Score=100.31 Aligned_cols=197 Identities=14% Similarity=0.150 Sum_probs=119.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-------L 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-------~ 75 (312)
.|+++||||++.||++++++|+++|++|++++|+.... + ...+.+ .........|+.+.+.+.+... .
T Consensus 5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~--~--~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG--E--AQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH--H--HHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH--H--HHHHHh-CCCccccccccccccccccccccccccccc
Confidence 47899999999999999999999999999999985432 1 122333 4577888899988766655443 5
Q ss_pred CCEEEEcCCCCccc--------------------cchhHhHHHHHHHHHHhC---------CCceeec-CCCCCCccccc
Q 021470 76 VDVVICAISGVHIR--------------------SHQILLQLKLVDAIKEAG---------NVKRFLP-SEFGTDPAKMA 125 (312)
Q Consensus 76 ~d~v~~~~~~~~~~--------------------~~~~~~~~~l~~aa~~~~---------~v~~~v~-S~~g~~~~~~~ 125 (312)
.|.+++++...... +.|+.....+.+++...- .-.++|. |+.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~---- 155 (248)
T d2o23a1 80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE---- 155 (248)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----
T ss_pred ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc----
Confidence 68887776543210 146666677777765431 0124554 4433211
Q ss_pred ccCCCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCc-ceeeeeH
Q 021470 126 NAMEPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNP-KAIYVDE 196 (312)
Q Consensus 126 ~~~~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~ 196 (312)
+ .|..+.|. +|..++.+.+. .|+++..|.||.+...+...+.... ... ...... ...+...
T Consensus 156 -~-~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~-----~~~---~~~~~pl~~R~g~p 225 (248)
T d2o23a1 156 -G-QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKV-----CNF---LASQVPFPSRLGDP 225 (248)
T ss_dssp -C-CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CH---HHHTCSSSCSCBCH
T ss_pred -C-CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHH-----HHH---HHhcCCCCCCCcCH
Confidence 1 12344444 99998887763 5788899999987655433221110 000 000000 0135689
Q ss_pred HHHHHHHHHHhcCCccCCceEE
Q 021470 197 DDIAMYTMKAINDPRTLNRTMY 218 (312)
Q Consensus 197 ~D~a~~~~~~l~~~~~~~~~~~ 218 (312)
+|+|+++..+++++--.|++.+
T Consensus 226 eevA~~v~fL~s~~~itGq~I~ 247 (248)
T d2o23a1 226 AEYAHLVQAIIENPFLNGEVIR 247 (248)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEE
T ss_pred HHHHHHHHHHHhCCCCCceEeE
Confidence 9999999999875422344433
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.34 E-value=1e-11 Score=101.04 Aligned_cols=205 Identities=11% Similarity=0.076 Sum_probs=121.4
Q ss_pred CCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 2 EKSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 2 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
..|++|||||+| .||++++++|+++|++|+++.|+... .++...+.. ......+++.|+.+++++.++++
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~--~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL--EKRVRPIAQ-ELNSPYVYELDVSKEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT--HHHHHHHHH-HTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHh-hCCceeEeeecccchhhHHHHHHHHHHH
Confidence 468999999987 69999999999999999999998432 223322222 24567788999999888777764
Q ss_pred --cCCEEEEcCCCCcccc-------c-----------hhHhHHHHHHHHHHhCCCceee--cCCCCCCcccccccCCCCC
Q 021470 75 --LVDVVICAISGVHIRS-------H-----------QILLQLKLVDAIKEAGNVKRFL--PSEFGTDPAKMANAMEPGR 132 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~-------~-----------~~~~~~~l~~aa~~~~~v~~~v--~S~~g~~~~~~~~~~~p~~ 132 (312)
++|+++|+++...... . +................-..+| .|+.+..... +..
T Consensus 81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~------~~~ 154 (274)
T d2pd4a1 81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------AHY 154 (274)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------TTC
T ss_pred cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc------ccc
Confidence 6899999998654211 0 0111222222222221112223 2444432221 123
Q ss_pred chhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 133 VTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 133 ~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|. +|..++.+.+. .|+++..+.||.+........... ...............+...+|+|.++.
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~------~~~~~~~~~~~p~~r~~~pedIA~~v~ 228 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF------RMILKWNEINAPLRKNVSLEEVGNAGM 228 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH------HHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch------HHHHHHHhhhhhccCCcCHHHHHHHHH
Confidence 3444 99888877653 578899999998765433221110 000000000011124578999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.+.. -.|+.+.+.|
T Consensus 229 fL~S~~s~~itG~~i~vDG 247 (274)
T d2pd4a1 229 YLLSSLSSGVSGEVHFVDA 247 (274)
T ss_dssp HHHSGGGTTCCSCEEEEST
T ss_pred HHhChhhCCCcCceEEECC
Confidence 9997642 2356777753
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.31 E-value=1e-11 Score=100.14 Aligned_cols=206 Identities=12% Similarity=0.038 Sum_probs=122.9
Q ss_pred CCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-----
Q 021470 2 EKSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK----- 74 (312)
Q Consensus 2 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~----- 74 (312)
..|+++||||+| .||+++++.|+++|++|++..|+... .++.+... -.......++.|..+..+..+.+.
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL--KGRVEEFA-AQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTT--HHHHHHHH-HHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHH-hhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 468999999999 68899999999999999999997432 22222111 123467788899999877777654
Q ss_pred --cCCEEEEcCCCCcccc-------------------chhHhHHHHHHHHHHhCC-Cceeec-CCCCCCcccccccCCCC
Q 021470 75 --LVDVVICAISGVHIRS-------------------HQILLQLKLVDAIKEAGN-VKRFLP-SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 --~~d~v~~~~~~~~~~~-------------------~~~~~~~~l~~aa~~~~~-v~~~v~-S~~g~~~~~~~~~~~p~ 131 (312)
..|+++|+++...... .+......+.+++...-. -..++. |+.+..... +..
T Consensus 81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~-----~~~ 155 (258)
T d1qsga_ 81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-----PNY 155 (258)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----TTT
T ss_pred ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC-----CCc
Confidence 5699999987654211 222233444444433210 122333 555432221 112
Q ss_pred CchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHH
Q 021470 132 RVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTM 204 (312)
Q Consensus 132 ~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~ 204 (312)
..|..+|..++.+.+. +|+++..|.||.+............ ....-.........+...+|+|.++.
T Consensus 156 ~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~------~~~~~~~~~~pl~R~~~peeia~~v~ 229 (258)
T d1qsga_ 156 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFR------KMLAHCEAVTPIRRTVTIEDVGNSAA 229 (258)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHH------HHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhh------hHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 3344499999888764 4788899999988654433211100 00000000000113668999999999
Q ss_pred HHhcCCc--cCCceEEecC
Q 021470 205 KAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 205 ~~l~~~~--~~~~~~~~~~ 221 (312)
.++.+.. -.|+++.+.|
T Consensus 230 fL~s~~s~~itG~~i~vDG 248 (258)
T d1qsga_ 230 FLCSDLSAGISGEVVHVDG 248 (258)
T ss_dssp HHTSGGGTTCCSCEEEEST
T ss_pred HHhCchhcCccCceEEECc
Confidence 9997542 2356677754
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.28 E-value=6.1e-11 Score=93.98 Aligned_cols=183 Identities=14% Similarity=0.068 Sum_probs=111.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-------hc-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-------VK- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-------~~- 74 (312)
.|+|+||||+|.||+++++.|+++|++|.+++|..... ......+..|..+.+..... +.
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLGD 69 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence 47999999999999999999999999999998874321 12223344555444333322 22
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||+++..... +.|+....++.+++...- .-.++|. |+...... .|....|.
T Consensus 70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------~~~~~~Y~ 143 (236)
T d1dhra_ 70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG------TPGMIGYG 143 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------CTTBHHHH
T ss_pred CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC------ccCCcccH
Confidence 489999999853211 145555666666655431 0124554 44332111 12334444
Q ss_pred -hHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 -DKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 -~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+. .++.+..+.||.+...+...... ....-.++..+++|+.+..+
T Consensus 144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~----------------~~~~~~~~~pe~va~~~~~l 207 (236)
T d1dhra_ 144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP----------------EADFSSWTPLEFLVETFHDW 207 (236)
T ss_dssp HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST----------------TSCGGGSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc----------------cchhhcCCCHHHHHHHHHHH
Confidence 99999988875 25667788898876543221111 01123567899999999999
Q ss_pred hcCCc--cCCceEEe
Q 021470 207 INDPR--TLNRTMYL 219 (312)
Q Consensus 207 l~~~~--~~~~~~~~ 219 (312)
+.... ..|+.+.+
T Consensus 208 ~s~~~~~i~G~~i~v 222 (236)
T d1dhra_ 208 ITGNKRPNSGSLIQV 222 (236)
T ss_dssp HTTTTCCCTTCEEEE
T ss_pred hCCCccCCCCCeEEE
Confidence 87643 23444444
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.27 E-value=4.3e-11 Score=94.85 Aligned_cols=183 Identities=12% Similarity=0.085 Sum_probs=109.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHH-------HHhc-
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLV-------NAVK- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~-------~~~~- 74 (312)
..||+||||+|.||++++++|+++|++|++++|+.... ......+.+|..+.+... ..++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG 69 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence 35899999999999999999999999999999984322 122234455665443322 2222
Q ss_pred -cCCEEEEcCCCCccc---------------cchhHhHHHHHHHHHHhC-CCceeec-CCCCCCcccccccCCCCCchhh
Q 021470 75 -LVDVVICAISGVHIR---------------SHQILLQLKLVDAIKEAG-NVKRFLP-SEFGTDPAKMANAMEPGRVTFD 136 (312)
Q Consensus 75 -~~d~v~~~~~~~~~~---------------~~~~~~~~~l~~aa~~~~-~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~ 136 (312)
++|++||++|..... ..|+.....+++++...- .-.++|. |+..... + .|....|.
T Consensus 70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~-----~-~~~~~~Y~ 143 (235)
T d1ooea_ 70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----P-TPSMIGYG 143 (235)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----C-CTTBHHHH
T ss_pred CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC-----C-cccccchH
Confidence 489999999853311 145555666666665531 0124554 4432211 1 12344555
Q ss_pred -hHHHHHHHHHHh---------CCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHH
Q 021470 137 -DKMVVRKAIEDA---------GIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKA 206 (312)
Q Consensus 137 -~K~~~e~~~~~~---------~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~ 206 (312)
+|..++.+.+.. ++.+..+.||.+.......... ......++..+|+++.++..
T Consensus 144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~----------------~~~~~~~~~~~~va~~~~~~ 207 (235)
T d1ooea_ 144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP----------------NADHSSWTPLSFISEHLLKW 207 (235)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST----------------TCCGGGCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc----------------CCccccCCCHHHHHHHHHHH
Confidence 999998887742 3445667888765443221111 01123567899999998877
Q ss_pred hcCCc---cCCceEEe
Q 021470 207 INDPR---TLNRTMYL 219 (312)
Q Consensus 207 l~~~~---~~~~~~~~ 219 (312)
+..+. ..|..+.+
T Consensus 208 l~~~~~~~~tG~~i~v 223 (235)
T d1ooea_ 208 TTETSSRPSSGALLKI 223 (235)
T ss_dssp HHCGGGCCCTTCEEEE
T ss_pred hcCccccCCCceEEEE
Confidence 65542 23444444
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.25 E-value=6.6e-11 Score=96.63 Aligned_cols=200 Identities=11% Similarity=0.036 Sum_probs=113.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh---ccCCCeEE-----------------Ec
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF---KEQGAKLV-----------------SG 61 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l---~~~~~~~v-----------------~~ 61 (312)
|+.++||||++.||+++++.|++.|++|.+..|+. .++.+.+ +.+ ....+..+ .+
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 77 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS----AAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 77 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC----HHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCC----HHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccc
Confidence 56789999999999999999999999999988763 2222211 112 12233333 45
Q ss_pred cCCCHHHHHHHhc-------cCCEEEEcCCCCcccc----------------------------chhHhHHHHHHHHHHh
Q 021470 62 SFNDYQSLVNAVK-------LVDVVICAISGVHIRS----------------------------HQILLQLKLVDAIKEA 106 (312)
Q Consensus 62 D~~d~~~l~~~~~-------~~d~v~~~~~~~~~~~----------------------------~~~~~~~~l~~aa~~~ 106 (312)
|+++.++++++++ ++|++||+++...... .|+.....+.+++...
T Consensus 78 dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 157 (284)
T d1e7wa_ 78 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 157 (284)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence 5778877777653 6899999999754211 1222333333433321
Q ss_pred ---------CCCceeec-CCCCCCcccccccCCCCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCC
Q 021470 107 ---------GNVKRFLP-SEFGTDPAKMANAMEPGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLC 169 (312)
Q Consensus 107 ---------~~v~~~v~-S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~ 169 (312)
+....++. ++..... +......|..+|..++.+.+. .|+++..|.||+..... ...
T Consensus 158 ~~~~~~~~~~~~~~ii~~~s~~~~~-----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--~~~ 230 (284)
T d1e7wa_ 158 VAGTPAKHRGTNYSIINMVDAMTNQ-----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--DMP 230 (284)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTS-----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--GSC
T ss_pred hhhhHHHhcCCCCcccccccccccC-----CccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--cCC
Confidence 10123443 2222111 111123455599998877663 57888889998632110 000
Q ss_pred CCCccCCCCCeeEEeCCCCc-ceeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 170 QPGSILPSKDSVVLLGDGNP-KAIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
. .. .+ -...... ...+...+|+|++++.++.+.. -.|+.+.+.|
T Consensus 231 ~-~~--~~-----~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG 277 (284)
T d1e7wa_ 231 P-AV--WE-----GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 277 (284)
T ss_dssp H-HH--HH-----HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred H-HH--HH-----HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence 0 00 00 0000000 0135689999999999997543 2466777764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.25 E-value=2.1e-11 Score=98.76 Aligned_cols=210 Identities=11% Similarity=0.060 Sum_probs=117.6
Q ss_pred CCCcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhccCCCeEEEccCCCHHHHHHHhc---
Q 021470 1 MEKSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKEQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 1 M~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
|..|+++||||+| .||++++++|.+.|.+|++..|+ .++. +........+...+++|+.+++++.++++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~-----~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~ 78 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFD-----RLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVT 78 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECS-----CHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCC-----hHHHHHHHHHHcCCceeeEeeecccccccccccchhh
Confidence 4468999999765 49999999999999999999987 3332 22233335678889999999866655532
Q ss_pred -------cCCEEEEcCCCCccc--------c-----------chhHhHHHHHHHHHHhCCCc-eeecCCCCCCccccccc
Q 021470 75 -------LVDVVICAISGVHIR--------S-----------HQILLQLKLVDAIKEAGNVK-RFLPSEFGTDPAKMANA 127 (312)
Q Consensus 75 -------~~d~v~~~~~~~~~~--------~-----------~~~~~~~~l~~aa~~~~~v~-~~v~S~~g~~~~~~~~~ 127 (312)
..|+++|+++..... + .+.........++.....-. .++.++.+...
T Consensus 79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~------ 152 (268)
T d2h7ma1 79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR------ 152 (268)
T ss_dssp HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS------
T ss_pred hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc------
Confidence 369999999864311 0 11111222222222221001 12222212111
Q ss_pred CCCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeC----C-CCcceeee
Q 021470 128 MEPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLG----D-GNPKAIYV 194 (312)
Q Consensus 128 ~~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~v 194 (312)
..|....|. +|..++.+.+. .++++..|.||.+......................... . ..-.+.+.
T Consensus 153 ~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~ 232 (268)
T d2h7ma1 153 AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMK 232 (268)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTT
T ss_pred cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCC
Confidence 112334444 99998887763 47889999999886543322111100000000000000 0 00012356
Q ss_pred eHHHHHHHHHHHhcCCc-c-CCceEEecC
Q 021470 195 DEDDIAMYTMKAINDPR-T-LNRTMYLRP 221 (312)
Q Consensus 195 ~~~D~a~~~~~~l~~~~-~-~~~~~~~~~ 221 (312)
.++|+|+++..++.+.. + .|+++.+.|
T Consensus 233 ~p~dva~~v~fL~Sd~a~~iTG~~i~vDG 261 (268)
T d2h7ma1 233 DATPVAKTVCALLSDWLPATTGDIIYADG 261 (268)
T ss_dssp CCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred CHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence 79999999999996532 2 356666653
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=5.6e-11 Score=96.16 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=112.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh----hhccCCCeEEEccCCCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL----SFKEQGAKLVSGSFNDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~l~~~~~~~v~~D~~d~~~l~~~~~---- 74 (312)
.++++||||++.||+++++.|+++|++|++++|+ .++.+... ......+..+.+|..+.+.......
T Consensus 14 GK~alITGassGIG~aiA~~la~~G~~Vil~~r~-----~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 88 (269)
T d1xu9a_ 14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS-----KETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK 88 (269)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998 55553321 1223457788889988766665543
Q ss_pred ---cCCEEEEcCCCCcccc--------------chhHhHH----HHHHHHHHhCCCceeec--CCCCCCcccccccCCCC
Q 021470 75 ---LVDVVICAISGVHIRS--------------HQILLQL----KLVDAIKEAGNVKRFLP--SEFGTDPAKMANAMEPG 131 (312)
Q Consensus 75 ---~~d~v~~~~~~~~~~~--------------~~~~~~~----~l~~aa~~~~~v~~~v~--S~~g~~~~~~~~~~~p~ 131 (312)
+.|+++++++...... +|+.+.. .++...++.+ .++|. |..+... .|.
T Consensus 89 ~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~-------~p~ 159 (269)
T d1xu9a_ 89 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVA-------YPM 159 (269)
T ss_dssp HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSC-------CTT
T ss_pred HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCC-------CCC
Confidence 6899999988654211 4444443 3444444433 34443 3333211 123
Q ss_pred C-chhhhHHHHHHHHHH---------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHH
Q 021470 132 R-VTFDDKMVVRKAIED---------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAM 201 (312)
Q Consensus 132 ~-~~~~~K~~~e~~~~~---------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~ 201 (312)
. .|..+|..++.+.+. .++.+..+.||.+-......... +.......+.+++|+
T Consensus 160 ~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~----------------~~~~~~~~~~e~~a~ 223 (269)
T d1xu9a_ 160 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------------GIVHMQAAPKEECAL 223 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------------GGGGGGCBCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc----------------CCccccCCCHHHHHH
Confidence 4 444499998776542 24667778999876443221100 011123456789998
Q ss_pred HHHHHhcCC
Q 021470 202 YTMKAINDP 210 (312)
Q Consensus 202 ~~~~~l~~~ 210 (312)
.++......
T Consensus 224 ~i~~~~~~~ 232 (269)
T d1xu9a_ 224 EIIKGGALR 232 (269)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhhcC
Confidence 888766544
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=9.2e-11 Score=95.21 Aligned_cols=98 Identities=14% Similarity=0.174 Sum_probs=75.3
Q ss_pred CcEE-EEEcCCchhhHHHHHHHHhC-CCeEEEEECCCCCCChHHHHH-hhhhc--cCCCeEEEccCCCHHHHHHHhc---
Q 021470 3 KSKV-LIIGGTGYLGKRLVKASLAL-GHETYVLHRPEIGVDIEKVQM-LLSFK--EQGAKLVSGSFNDYQSLVNAVK--- 74 (312)
Q Consensus 3 ~~~i-lI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~-~~~l~--~~~~~~v~~D~~d~~~l~~~~~--- 74 (312)
.|+| +||||++.||++++++|++. |.+|++.+|+ .++.+. .+.+. ..++.++++|++|.++++++++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~ 76 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD-----VTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLR 76 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS-----HHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECC-----HHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHH
Confidence 3455 89999999999999999986 8999999999 666542 23343 3578999999999988887654
Q ss_pred ----cCCEEEEcCCCCccc--------------cchhHhHHHHHHHHHH
Q 021470 75 ----LVDVVICAISGVHIR--------------SHQILLQLKLVDAIKE 105 (312)
Q Consensus 75 ----~~d~v~~~~~~~~~~--------------~~~~~~~~~l~~aa~~ 105 (312)
++|++||+||..... ++|+.+...+.+++..
T Consensus 77 ~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 125 (275)
T d1wmaa1 77 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLP 125 (275)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred HhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999975421 1567777777777654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.21 E-value=2.3e-11 Score=93.15 Aligned_cols=80 Identities=25% Similarity=0.214 Sum_probs=67.7
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHh-hhh-ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQML-LSF-KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~l-~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+.++|+||||+|.||+.+++.|++.|.+|+++.|+ +++.+.. +.+ ...++....+|+.|.+.+.+++.++|+|
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDil 96 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK-----LDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFV 96 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccc-----hHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCee
Confidence 35899999999999999999999999999999999 6665433 222 2346678899999999999999999999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
||+++..
T Consensus 97 in~Ag~g 103 (191)
T d1luaa1 97 FTAGAIG 103 (191)
T ss_dssp EECCCTT
T ss_pred eecCccc
Confidence 9999864
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.21 E-value=1.2e-10 Score=92.73 Aligned_cols=192 Identities=16% Similarity=0.090 Sum_probs=113.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc------cCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK------LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~------~~d 77 (312)
|+++||||++.||+++++.|+++|++|.+.+|+.. ..+...+++|+.+......+.. ..+
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAPLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcccccc
Confidence 68999999999999999999999999999999832 2356778899998766666543 334
Q ss_pred EEEEcCCCCccc------------------cchhHhHHHHHHHHHHhC---------CCceeec-CCCCCCcccccccCC
Q 021470 78 VVICAISGVHIR------------------SHQILLQLKLVDAIKEAG---------NVKRFLP-SEFGTDPAKMANAME 129 (312)
Q Consensus 78 ~v~~~~~~~~~~------------------~~~~~~~~~l~~aa~~~~---------~v~~~v~-S~~g~~~~~~~~~~~ 129 (312)
.+++.++..... +.|......+..++...- .-.++|. |+..... +..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-----~~~ 142 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE-----GQI 142 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH-----CCT
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc-----CCC
Confidence 444444332110 134444444444443320 0124554 4422111 111
Q ss_pred CCCchhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCcceeeeeHHHHHHH
Q 021470 130 PGRVTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAIYVDEDDIAMY 202 (312)
Q Consensus 130 p~~~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~ 202 (312)
....|..+|..++.+.+. +|+++..|.||.+................. ...+.. ..+...+|+|++
T Consensus 143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~-~~~~~~------~R~g~pedvA~~ 215 (241)
T d1uaya_ 143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLA-AQVPFP------PRLGRPEEYAAL 215 (241)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHH-TTCCSS------CSCCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHH-hcCCCC------CCCcCHHHHHHH
Confidence 123444499998877663 578899999999865433221110000000 000000 135578999999
Q ss_pred HHHHhcCCccCCceEEecC
Q 021470 203 TMKAINDPRTLNRTMYLRP 221 (312)
Q Consensus 203 ~~~~l~~~~~~~~~~~~~~ 221 (312)
+..+++..--.|+++.+.|
T Consensus 216 v~fL~s~~~iTG~~i~VDG 234 (241)
T d1uaya_ 216 VLHILENPMLNGEVVRLDG 234 (241)
T ss_dssp HHHHHHCTTCCSCEEEEST
T ss_pred HHHHHhCCCCCCCEEEECC
Confidence 9999986534467777754
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.20 E-value=5.6e-10 Score=89.59 Aligned_cols=193 Identities=14% Similarity=0.084 Sum_probs=103.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh--------c
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV--------K 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~--------~ 74 (312)
||.|+||||++.||+++++.|++.|++|.+++|+... ...|+.+.+...... .
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999987321 145666665444332 2
Q ss_pred cCCEEEEcCCCCcccc-------chhHhHHHHHHH----HHHhCCCcee--ecCCCCCC--ccc-----------c----
Q 021470 75 LVDVVICAISGVHIRS-------HQILLQLKLVDA----IKEAGNVKRF--LPSEFGTD--PAK-----------M---- 124 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~-------~~~~~~~~l~~a----a~~~~~v~~~--v~S~~g~~--~~~-----------~---- 124 (312)
.+|+++++++...... .|......+.++ ..+.. -... +.+..... ... .
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~ 140 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence 5899999998654321 223333333332 22222 1111 11110000 000 0
Q ss_pred ---c-ccCCCCC-chhhhHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCCccee
Q 021470 125 ---A-NAMEPGR-VTFDDKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGNPKAI 192 (312)
Q Consensus 125 ---~-~~~~p~~-~~~~~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (312)
. ....+.. .|..+|..++.+.+. .|+++..|.||.+..+......... . ....+........-
T Consensus 141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~-~~~~~~~~~~PlgR 215 (257)
T d1fjha_ 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP----R-YGESIAKFVPPMGR 215 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------CCCSTTS
T ss_pred eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH----H-HHHHHHhcCCCCCC
Confidence 0 0011112 244499998877663 5799999999998655433221110 0 00000111011123
Q ss_pred eeeHHHHHHHHHHHhcCCc--cCCceEEec
Q 021470 193 YVDEDDIAMYTMKAINDPR--TLNRTMYLR 220 (312)
Q Consensus 193 ~v~~~D~a~~~~~~l~~~~--~~~~~~~~~ 220 (312)
+...+|+|.++..++.... -.|+.+.+.
T Consensus 216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vD 245 (257)
T d1fjha_ 216 RAEPSEMASVIAFLMSPAASYVHGAQIVID 245 (257)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEeC
Confidence 6689999999999987543 236666774
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.12 E-value=7.1e-10 Score=89.41 Aligned_cols=201 Identities=14% Similarity=0.070 Sum_probs=108.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHH-HHHhhhhccCCCeEEEccCCC----HHHHHHH------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEK-VQMLLSFKEQGAKLVSGSFND----YQSLVNA------ 72 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~l~~~~~~~v~~D~~d----~~~l~~~------ 72 (312)
++.+||||++.||++++++|+++|++|++.+|+.... .++ .+............++.|..+ .+.+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGA-AQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH-HHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999984221 111 112222223455666665543 3333333
Q ss_pred -hccCCEEEEcCCCCcccc-------------------------chhHhHHHHHHHHHHhCC--------Cceeec-CCC
Q 021470 73 -VKLVDVVICAISGVHIRS-------------------------HQILLQLKLVDAIKEAGN--------VKRFLP-SEF 117 (312)
Q Consensus 73 -~~~~d~v~~~~~~~~~~~-------------------------~~~~~~~~l~~aa~~~~~--------v~~~v~-S~~ 117 (312)
+.++|+++|+++...... .|..............-. ...++. ++.
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 336999999999654211 011111111111111110 011111 221
Q ss_pred CCCcccccccCCCCCchhh-hHHHHHHHHHH-------hCCCeEEEecccccccccccCCCCCccCCCCCeeEEeCCCC-
Q 021470 118 GTDPAKMANAMEPGRVTFD-DKMVVRKAIED-------AGIPFTYVSANCFAGYFLGGLCQPGSILPSKDSVVLLGDGN- 188 (312)
Q Consensus 118 g~~~~~~~~~~~p~~~~~~-~K~~~e~~~~~-------~~~~~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 188 (312)
+. ....|....|. +|..++.+.+. .|+++..|.||.+...... .. .....+...-
T Consensus 161 ~~------~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~~-------~~~~~~~~~~p 224 (266)
T d1mxha_ 161 MT------DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---PQ-------ETQEEYRRKVP 224 (266)
T ss_dssp GG------GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---CH-------HHHHHHHTTCT
T ss_pred cc------cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---CH-------HHHHHHHhcCC
Confidence 11 11122344444 99998877653 5788889999976422110 00 0000000000
Q ss_pred cceeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 189 PKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 189 ~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
-.+.+...+|+|.+++.++.+.. ..|+.+.+.|
T Consensus 225 l~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG 259 (266)
T d1mxha_ 225 LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDG 259 (266)
T ss_dssp TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence 01234689999999999998653 2466777754
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.00 E-value=3.7e-09 Score=86.57 Aligned_cols=203 Identities=12% Similarity=0.042 Sum_probs=108.4
Q ss_pred CcEEEEEcCCc--hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc--------------CCC-eEEEcc--C
Q 021470 3 KSKVLIIGGTG--YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE--------------QGA-KLVSGS--F 63 (312)
Q Consensus 3 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~--------------~~~-~~v~~D--~ 63 (312)
.|+++||||+| .||+++++.|++.|.+|++..|+ +........+.. .+. .....| +
T Consensus 8 gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV-----PALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH-----HHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc-----hhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 58999999987 79999999999999999999886 221111110000 000 111222 1
Q ss_pred ---------------------CCHH----HHHHHhccCCEEEEcCCCCcc-----c-----------cchhHhHHHHHHH
Q 021470 64 ---------------------NDYQ----SLVNAVKLVDVVICAISGVHI-----R-----------SHQILLQLKLVDA 102 (312)
Q Consensus 64 ---------------------~d~~----~l~~~~~~~d~v~~~~~~~~~-----~-----------~~~~~~~~~l~~a 102 (312)
.+.+ .+.+.+.++|+++|+++.... . +.|+.....+.++
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 1222 222334479999999986431 1 1445555566665
Q ss_pred HHHhCCCc--e-eecCCCCCCcccccccCCCCCchhhhHHHHHHHHH--------HhCCCeEEEecccccccccccCCCC
Q 021470 103 IKEAGNVK--R-FLPSEFGTDPAKMANAMEPGRVTFDDKMVVRKAIE--------DAGIPFTYVSANCFAGYFLGGLCQP 171 (312)
Q Consensus 103 a~~~~~v~--~-~v~S~~g~~~~~~~~~~~p~~~~~~~K~~~e~~~~--------~~~~~~~i~r~~~~~~~~~~~~~~~ 171 (312)
+.... .+ . ++.++.+..... ......|..+|..+..+.+ ..++++..|.||.+...........
T Consensus 163 ~~~~~-~~~g~~~~~~~~~~~~~~----~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~ 237 (297)
T d1d7oa_ 163 FLPIM-NPGGASISLTYIASERII----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI 237 (297)
T ss_dssp HGGGE-EEEEEEEEEECGGGTSCC----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred HHHHh-hcCCcceeeeehhhcccc----cccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC
Confidence 55432 11 1 222221211110 0112345558877665543 3589999999998865433211100
Q ss_pred CccCCCCCeeEEeCCCCcceeeeeHHHHHHHHHHHhcCCc--cCCceEEecC
Q 021470 172 GSILPSKDSVVLLGDGNPKAIYVDEDDIAMYTMKAINDPR--TLNRTMYLRP 221 (312)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~v~~~D~a~~~~~~l~~~~--~~~~~~~~~~ 221 (312)
. .......+......+...+|+|.+++.++.... -.|+++.+.|
T Consensus 238 -----~-~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDG 283 (297)
T d1d7oa_ 238 -----D-TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDN 283 (297)
T ss_dssp -----H-HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred -----H-HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence 0 000000000011235689999999999997542 2466777753
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.99 E-value=3.8e-09 Score=75.44 Aligned_cols=95 Identities=19% Similarity=0.267 Sum_probs=73.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
|+|+|+|+ |.+|+.+++.|.+.|++|+++.++ +++.+.+.. ..+..++.||.+|++.+.++ ++.+|.++.+
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d-----~~~~~~~~~--~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDID-----KDICKKASA--EIDALVINGDCTKIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHH--HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCC-----hhhhhhhhh--hhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence 69999995 999999999999999999999998 777754322 23789999999999999998 5689999887
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
..... ...-+...++..+ ++++|.
T Consensus 73 t~~d~-------~N~~~~~~~k~~~-~~~iI~ 96 (132)
T d1lssa_ 73 TGKEE-------VNLMSSLLAKSYG-INKTIA 96 (132)
T ss_dssp CSCHH-------HHHHHHHHHHHTT-CCCEEE
T ss_pred CCcHH-------HHHHHHHHHHHcC-CceEEE
Confidence 65421 1223344566677 677664
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.82 E-value=3.6e-08 Score=70.41 Aligned_cols=95 Identities=21% Similarity=0.271 Sum_probs=73.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
|+++|+| .|.+|+++++.|.+.|++|+++..+ +++. +.+...+...+.+|.++++.+.++ ++.+|.++.+
T Consensus 1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d-----~~~~---~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~ 71 (134)
T d2hmva1 1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDIN-----EEKV---NAYASYATHAVIANATEENELLSLGIRNFEYVIVA 71 (134)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESC-----HHHH---HHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCc-----HHHH---HHHHHhCCcceeeecccchhhhccCCccccEEEEE
Confidence 5788998 6999999999999999999999998 7777 445577889999999999999987 7789999888
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+... .....+..+++..+ ..+++.
T Consensus 72 ~~~~~------~~~~~~~~~~~~~~-~~~iia 96 (134)
T d2hmva1 72 IGANI------QASTLTTLLLKELD-IPNIWV 96 (134)
T ss_dssp CCSCH------HHHHHHHHHHHHTT-CSEEEE
T ss_pred cCchH------HhHHHHHHHHHHcC-CCcEEe
Confidence 76542 12222333444455 566654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=2.1e-07 Score=66.70 Aligned_cols=91 Identities=15% Similarity=0.227 Sum_probs=58.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++|.|+||||++|+.+++.|+++. .+++.++++.+..+ ......-.....+..+.+. +.++|+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~--------~~~~~~~~~~~~~~~~~~~----~~~~Di 68 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQA--------APSFGGTTGTLQDAFDLEA----LKALDI 68 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSB--------CCGGGTCCCBCEETTCHHH----HHTCSE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccc--------cccccCCceeeecccchhh----hhcCcE
Confidence 5699999999999999999888764 36777766544321 0111111112223344333 568999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+|.+++. ...+.+...+.++| .+-+|.
T Consensus 69 vF~a~~~--------~~s~~~~~~~~~~g-~~~~VI 95 (146)
T d1t4ba1 69 IVTCQGG--------DYTNEIYPKLRESG-WQGYWI 95 (146)
T ss_dssp EEECSCH--------HHHHHHHHHHHHTT-CCCEEE
T ss_pred EEEecCc--------hHHHHhhHHHHhcC-CCeecc
Confidence 9999863 34667777888888 664554
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.54 E-value=9.7e-07 Score=72.80 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=29.9
Q ss_pred CcEEEEEc--CCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIG--GTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~G--atG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.+..|||| ++..||+.+++.|.+.|.+|.+..|.
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~ 37 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP 37 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence 36789999 55689999999999999999998876
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.53 E-value=9.8e-07 Score=65.99 Aligned_cols=90 Identities=21% Similarity=0.252 Sum_probs=66.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+|| |.+|+.+++.|.++||+|+++.|+ .++++.+..- -........+..+.......+...|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~-----~~~a~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRT-----LESAKKLSAG-VQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESC-----HHHHHHHHTT-CTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECC-----hHHHHHHHhc-ccccccccccccchhhhHhhhhccceeEee
Confidence 589999995 999999999999999999999999 7777544321 223444455667778888888889998877
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+.. .....+..+.+.+
T Consensus 75 ~~~~--------~~~~~~~~~~~~~ 91 (182)
T d1e5qa1 75 IPYT--------FHATVIKSAIRQK 91 (182)
T ss_dssp SCGG--------GHHHHHHHHHHHT
T ss_pred ccch--------hhhHHHHHHHhhc
Confidence 6543 2334556666666
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.52 E-value=1e-06 Score=62.98 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=70.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCC-CeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQG-AKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~-~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
||.|+||+|.+|++++..|..+| .++..++.+ +.+.+.+ .+.... ...... .....+..+.++++|+|+.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~-----~~~~~a~-Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVi 74 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA-----HTPGVAA-DLSHIETRATVKG-YLGPEQLPDCLKGCDVVVI 74 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS-----SHHHHHH-HHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEecc-----ccchhhH-HHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEE
Confidence 89999999999999999999888 578888876 4455433 332222 211222 2234566677899999999
Q ss_pred cCCCCccc--------cchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+++..... ..|....+.+++.+.+++ .+-++
T Consensus 75 tag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~-p~~ii 113 (144)
T d1mlda1 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMI 113 (144)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred CCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCeEE
Confidence 99964422 267888999999999987 44433
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.34 E-value=2.6e-06 Score=60.81 Aligned_cols=90 Identities=23% Similarity=0.269 Sum_probs=55.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|||.|+||||++|+.+++.|+++. .++..++.+.+..+ .....+-.....+..+.+. ++++|+|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk--------~~~~~~~~~~~~~~~~~~~----~~~~Dvv 68 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--------APNFGKDAGMLHDAFDIES----LKQLDAV 68 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB--------CCCSSSCCCBCEETTCHHH----HTTCSEE
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc--------ccccCCcceeeecccchhh----hccccEE
Confidence 589999999999999999888754 35665554433221 0101111111122334333 5789999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
|.+++.. ..+.+...+.++| .+.+|.
T Consensus 69 F~alp~~--------~s~~~~~~l~~~g-~~~~VI 94 (147)
T d1mb4a1 69 ITCQGGS--------YTEKVYPALRQAG-WKGYWI 94 (147)
T ss_dssp EECSCHH--------HHHHHHHHHHHTT-CCSEEE
T ss_pred EEecCch--------HHHHHhHHHHHcC-CceEEE
Confidence 9998743 3567778888888 664443
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=98.32 E-value=7.7e-06 Score=59.25 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=71.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~ 81 (312)
.+|+|+| .|.+|+.+++.|.+.|++|+++..+ +++. ...+.+...++.++.||.+|++.+.++ ++.++.++.
T Consensus 4 nHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d-----~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~ 77 (153)
T d1id1a_ 4 DHFIVCG-HSILAINTILQLNQRGQNVTVISNL-----PEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECC-----CHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecc-----chhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEE
Confidence 3688999 6999999999999999999999887 4433 233445567999999999999999886 568999998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.... .....++..+++.++..++|
T Consensus 78 ~~~~d-------~~n~~~~~~~r~~~~~~~ii 102 (153)
T d1id1a_ 78 LSDND-------ADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp CSSCH-------HHHHHHHHHHHHHTSSSCEE
T ss_pred ccccH-------HHHHHHHHHHHHhCCCCceE
Confidence 87542 22334455566644244444
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=2.3e-06 Score=61.17 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=64.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHh-CC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLA-LG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~-~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|||.|+|++|.+|++++..|.. .+ .++..++..+ ..+... ..+.+.....-..-+...+.. +.++++|+|+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~----~~~g~a-~Dl~h~~~~~~~~~~~~~~~~-~~~~~aDvvv 74 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP----VTPGVA-VDLSHIPTAVKIKGFSGEDAT-PALEGADVVL 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST----THHHHH-HHHHTSCSSCEEEEECSSCCH-HHHTTCSEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc----cchhHH-HHHHCCccccCCcEEEcCCCc-cccCCCCEEE
Confidence 6999999999999999987754 34 6888887642 112222 233222111111111111222 2477999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhCCCceee
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
.+++..... ..|....+.+++.+.+++ .+.++
T Consensus 75 itaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aiv 114 (145)
T d2cmda1 75 ISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACI 114 (145)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred ECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC-CCcEE
Confidence 999975422 167888899999999887 44433
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.28 E-value=9.7e-06 Score=57.82 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=67.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhc------cCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFK------EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|||.|+||+|.+|+.++..|..++ .++..++++.. .++.+ ....+. ..+.++....-.|. +.++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~---~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~ 73 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS---INKLEGLREDIYDALAGTRSDANIYVESDENL----RIID 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG---HHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhh---hHhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence 589999999999999999999998 59999988622 12221 111111 22334332222233 3477
Q ss_pred cCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceee
Q 021470 75 LVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
++|+|+.++|..... ..|....+.+++...+++ -+.++
T Consensus 74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~ii 119 (145)
T d1hyea1 74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF 119 (145)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_pred cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEE
Confidence 999999999875432 167777888899888887 34443
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.24 E-value=8.3e-06 Score=58.31 Aligned_cols=97 Identities=18% Similarity=0.290 Sum_probs=66.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH--Hhh--h--hccCCCeEEEccCCCHHHHHHHhc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ--MLL--S--FKEQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~--~--l~~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
.|||.|+| +|++|..++..|+.+| .+|..++++ .++.. .++ . .......+..+|+ + .++
T Consensus 5 ~~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~ 71 (146)
T d1ez4a1 5 HQKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVV-----KDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCK 71 (146)
T ss_dssp BCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGT
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecc-----cchhHHHHHHHhccccccCCceEeeccH---H----Hhc
Confidence 57999999 5999999999999988 699999987 44432 111 1 1122344555554 2 367
Q ss_pred cCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhCCCceee
Q 021470 75 LVDVVICAISGVHIRS--------HQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
++|+|+.+++...... .|....+.+++.+.+++ .+-++
T Consensus 72 ~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aiv 117 (146)
T d1ez4a1 72 DADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIF 117 (146)
T ss_dssp TCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEE
T ss_pred cccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEE
Confidence 9999999998755321 57777888999888887 44443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.12 E-value=2.3e-05 Score=56.13 Aligned_cols=92 Identities=18% Similarity=0.380 Sum_probs=63.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhc------cCCCeEEEccCCCHHHHHHHh
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFK------EQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~------~~~~~~v~~D~~d~~~l~~~~ 73 (312)
.+||.|+|| |++|+.++..|+.++ .++..++++ +++++ ....+. .....+...|+ +.+
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~-----~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l 72 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDAN-----ESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDC 72 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGT
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeec-----cccccchhccHhhCccccCCCeEEEECCH-------HHh
Confidence 368999996 999999999999988 489999887 44421 111121 22344444443 347
Q ss_pred ccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 74 KLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 74 ~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+++|+|+.+++..... ..|....+.+++.+++++
T Consensus 73 ~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~ 114 (148)
T d1ldna1 73 RDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG 114 (148)
T ss_dssp TTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhC
Confidence 7999999999875532 156777788888888877
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.07 E-value=2.7e-06 Score=64.57 Aligned_cols=38 Identities=45% Similarity=0.601 Sum_probs=34.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQ 46 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~ 46 (312)
|||.|+||+|.+|+.|++.|++.||+|.+.+|+ +++.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~-----~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR-----EEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS-----HHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC-----HHHHH
Confidence 589999999999999999999999999999998 66664
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.07 E-value=4.6e-05 Score=55.55 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=34.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQM 47 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 47 (312)
|++|.++| .|.+|+.+++.|+++||+|.++.|+ +++.+.
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~-----~~~~~~ 39 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLV-----QSAVDG 39 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSS-----HHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECc-----hhhhhh
Confidence 46899999 9999999999999999999999998 666543
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=98.06 E-value=1.9e-05 Score=55.92 Aligned_cols=98 Identities=12% Similarity=0.166 Sum_probs=64.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhc-----cCCCeEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFK-----EQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~-----~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
.||.|+||+|.+|+.++..|+.++ .++..++.... .++.. ....+. .....+..+|+ + .+++
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~---~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~ 70 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDK---EDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAG 70 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGG---HHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTT
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCc---ccccceeecchhhcccccCCceEeeCCH---H----Hhhh
Confidence 389999999999999999999998 47888775321 22221 111221 23444444443 3 2579
Q ss_pred CCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhCCCcee
Q 021470 76 VDVVICAISGVHIRS--------HQILLQLKLVDAIKEAGNVKRF 112 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~~v~~~ 112 (312)
+|+|+.+++...... .|....+.+++.+.+.+ -+-+
T Consensus 71 aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i 114 (142)
T d1o6za1 71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYI 114 (142)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCE
T ss_pred cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCce
Confidence 999999998654321 57777888888888876 4443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.04 E-value=2.3e-06 Score=62.13 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=61.8
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCCC----eEEEEECCCCCCChHHHHHh-hhhcc---CCCeEEEccCCCHHHHHH
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALGH----ETYVLHRPEIGVDIEKVQML-LSFKE---QGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~l~~ 71 (312)
|+ .+||.|+||+|++|++++..|...+. +...+.--......++.... ..+.. .....+...- ...+
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 76 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKV 76 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhh
Confidence 66 46999999999999999999988652 11211111111113333221 11111 2233333322 2335
Q ss_pred HhccCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 72 AVKLVDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 72 ~~~~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
.++++|+|+.++|...... .|....+.+.+.+.+..
T Consensus 77 ~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6889999999999765322 47777888888888854
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.04 E-value=5.1e-06 Score=60.80 Aligned_cols=67 Identities=27% Similarity=0.298 Sum_probs=51.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||.|+| .|.+|+.+++.|+++||+|+++.|+ +++.+. +...+... ..+ ..++++++|+||.+.
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~-----~~~~~~---~~~~~~~~----~~~---~~e~~~~~d~ii~~v 64 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRN-----PEAIAD---VIAAGAET----AST---AKAIAEQCDVIITML 64 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHH---HHHTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCC-----cchhHH---HHHhhhhh----ccc---HHHHHhCCCeEEEEc
Confidence 5899999 8999999999999999999999998 666633 33444433 123 445667899999988
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
+..
T Consensus 65 ~~~ 67 (161)
T d1vpda2 65 PNS 67 (161)
T ss_dssp SSH
T ss_pred CCH
Confidence 653
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.02 E-value=6.2e-06 Score=60.62 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=53.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|||.|+| .|.+|..+++.|.+.||+|++++|+ +++.+.... .++ .... | +. ++++++|+||.+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~-----~~~~~~a~~---~~~~~~~~-~--~~----~~~~~~DiIila 64 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQ-----QSTCEKAVE---RQLVDEAG-Q--DL----SLLQTAKIIFLC 64 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTSCSEEE-S--CG----GGGTTCSEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECC-----chHHHHHHH---hhccceee-e--ec----cccccccccccc
Confidence 5899998 7999999999999999999999998 555533222 222 1111 1 11 356789999987
Q ss_pred CCCCccccchhHhHHHHHHHHHHh
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEA 106 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~ 106 (312)
... .....+++.....
T Consensus 65 vp~--------~~~~~vl~~l~~~ 80 (165)
T d2f1ka2 65 TPI--------QLILPTLEKLIPH 80 (165)
T ss_dssp SCH--------HHHHHHHHHHGGG
T ss_pred CcH--------hhhhhhhhhhhhh
Confidence 753 3344555555443
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=98.00 E-value=2.1e-06 Score=64.59 Aligned_cols=79 Identities=19% Similarity=0.287 Sum_probs=54.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-----CCCeEEEccCCCHHHHHHHhcc
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-----QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-----~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
|.|+||+|+| +|.-|.+++..|.+.||+|+++.|+ ++..+....-.. +++.+ .-++.-..++.+++++
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~-----~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ 77 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMN-----EEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNG 77 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSC-----HHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTT
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEec-----HHHHHHHhhccccccccccccc-ccccccchhhhhccCC
Confidence 4578899999 8999999999999999999999998 655543322110 12211 1111112357788899
Q ss_pred CCEEEEcCCCC
Q 021470 76 VDVVICAISGV 86 (312)
Q Consensus 76 ~d~v~~~~~~~ 86 (312)
+|.|+.+.+..
T Consensus 78 ad~iiiavPs~ 88 (189)
T d1n1ea2 78 AEIILFVIPTQ 88 (189)
T ss_dssp CSCEEECSCHH
T ss_pred CCEEEEcCcHH
Confidence 99999887643
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.00 E-value=6.7e-06 Score=59.50 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=33.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
|++|+|+||.|.+|+.+++.|.+.||+|++++|+.
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~ 43 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 43 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence 68999999999999999999999999999999873
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.00 E-value=1.4e-05 Score=59.75 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=59.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhc-----cCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFK-----EQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~-----~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
+||+|+| .|.+|..++..|.++||+|.+++|+ +++.+...... ..+.+..........++.++++++|+
T Consensus 2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~ 75 (184)
T d1bg6a2 2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDID-----AQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADV 75 (184)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSE
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECC-----HHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCE
Confidence 7999999 6999999999999999999999998 66654333211 11122222111112346678889999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHh
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEA 106 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~ 106 (312)
||.+.... ....+++.++.+
T Consensus 76 iii~v~~~--------~~~~~~~~i~~~ 95 (184)
T d1bg6a2 76 ILIVVPAI--------HHASIAANIASY 95 (184)
T ss_dssp EEECSCGG--------GHHHHHHHHGGG
T ss_pred EEEEEchh--------HHHHHHHHhhhc
Confidence 99987543 344555555543
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.98 E-value=1.9e-05 Score=56.33 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=53.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+|+|.|+||||++|+.+++.|.+++ .++..++.+.+.. +.+....-+....++.+ ..+.++|++
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G--------k~i~~~~~~~~~~~~~~-----~~~~~~d~v 68 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG--------QRMGFAESSLRVGDVDS-----FDFSSVGLA 68 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT--------CEEEETTEEEECEEGGG-----CCGGGCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC--------cceeeccccchhccchh-----hhhccceEE
Confidence 4799999999999999999887655 4777765543322 11211121222222211 125689999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|.+++.. ....+...+.+.| + .+|
T Consensus 69 f~a~p~~--------~s~~~~~~~~~~g-~-~VI 92 (144)
T d2hjsa1 69 FFAAAAE--------VSRAHAERARAAG-C-SVI 92 (144)
T ss_dssp EECSCHH--------HHHHHHHHHHHTT-C-EEE
T ss_pred EecCCcc--------hhhhhccccccCC-c-eEE
Confidence 9887642 3556666666777 3 455
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.97 E-value=3e-05 Score=54.20 Aligned_cols=86 Identities=20% Similarity=0.203 Sum_probs=63.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH-hccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA-VKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~-~~~~d~v~~~ 82 (312)
++|+|.| -|.+|+.+++.|. +++|.++..+ +++. +.+...++.++.||.++++.|.++ +..++.++.+
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d-----~~~~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--GSEVFVLAED-----ENVR---KKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--GGGEEEEESC-----TTHH---HHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcc-----hHHH---HHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 4688898 7999999999984 5778888877 4444 334567999999999999999986 5689999987
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.... .....++..+++..
T Consensus 70 ~~~d-------~~n~~~~~~~r~~~ 87 (129)
T d2fy8a1 70 LESD-------SETIHCILGIRKID 87 (129)
T ss_dssp CSSH-------HHHHHHHHHHHHHC
T ss_pred ccch-------hhhHHHHHHHHHHC
Confidence 6542 23334555566654
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.94 E-value=0.0001 Score=50.10 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=64.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| +|.+|.+-++.|++.|.+|++++...+ ++.. ......++++++.++.+.+ +.+++.|+.+
T Consensus 12 ~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~---~~~~---~~~~~~~i~~~~~~~~~~d-----l~~~~lv~~a 79 (113)
T d1pjqa1 12 DRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFI---PQFT---VWANEGMLTLVEGPFDETL-----LDSCWLAIAA 79 (113)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCC---HHHH---HHHTTTSCEEEESSCCGGG-----GTTCSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCC---hHHH---HHHhcCCceeeccCCCHHH-----hCCCcEEeec
Confidence 57999999 899999999999999999999987643 2222 2334567888888775432 6788998877
Q ss_pred CCCCccccchhHhHHHHHHHHHHhC
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+.. .....+.+.|++.+
T Consensus 80 t~d~-------~~n~~i~~~a~~~~ 97 (113)
T d1pjqa1 80 TDDD-------TVNQRVSDAAESRR 97 (113)
T ss_dssp CSCH-------HHHHHHHHHHHHTT
T ss_pred CCCH-------HHHHHHHHHHHHcC
Confidence 6543 33457778888877
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.93 E-value=1.5e-05 Score=57.92 Aligned_cols=73 Identities=29% Similarity=0.484 Sum_probs=55.3
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+.++|||+|+ |.+|+.+++.|...|. ++++..|+ .+|+..+.. ..+.+.+ +.+++.+.+..+|+||
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt-----~~ka~~l~~--~~~~~~~-----~~~~~~~~l~~~Divi 89 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRT-----YERAVELAR--DLGGEAV-----RFDELVDHLARSDVVV 89 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSS-----HHHHHHHHH--HHTCEEC-----CGGGHHHHHHTCSEEE
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCc-----HHHHHHHHH--hhhcccc-----cchhHHHHhccCCEEE
Confidence 3579999995 9999999999999996 79999998 677743322 1233332 3456778888999999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+.+...
T Consensus 90 ~atss~~ 96 (159)
T d1gpja2 90 SATAAPH 96 (159)
T ss_dssp ECCSSSS
T ss_pred EecCCCC
Confidence 9998654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=2.7e-06 Score=62.68 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=47.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCe--EEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK--LVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~--~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|||+|+|+ |.+|..++..|.+.||+|+++.|+..... ..... ..+.. .......+.+ .+.++|+||.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~----~~~~~D~iii 69 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC-----SVNLV-ETDGSIFNESLTANDPD----FLATSDLLLV 69 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE-----EEEEE-CTTSCEEEEEEEESCHH----HHHTCSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh-----hhccc-cCCccccccccccchhh----hhcccceEEE
Confidence 69999995 99999999999999999999999854321 00111 11111 1111122333 3457999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
+.-...
T Consensus 70 ~vka~~ 75 (167)
T d1ks9a2 70 TLKAWQ 75 (167)
T ss_dssp CSCGGG
T ss_pred eecccc
Confidence 887553
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.90 E-value=7.1e-05 Score=48.89 Aligned_cols=86 Identities=20% Similarity=0.232 Sum_probs=61.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| -|-.|.++++.|.++|.+|++.+.+..... . +.+ ..+..+..+.. +.+ .+.++|.||..
T Consensus 5 ~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~---~---~~~-~~~~~~~~~~~-~~~----~~~~~d~vi~S 71 (93)
T d2jfga1 5 GKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L---DKL-PEAVERHTGSL-NDE----WLMAADLIVAS 71 (93)
T ss_dssp TCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESSSSCTT---G---GGS-CTTSCEEESBC-CHH----HHHHCSEEEEC
T ss_pred CCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCCcCchh---H---HHH-hhccceeeccc-chh----hhccCCEEEEC
Confidence 47899999 588999999999999999999988654321 1 222 34566665554 333 24578999998
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
.+.... ..+++.|++.| ++
T Consensus 72 PGi~~~--------~~~~~~a~~~g-i~ 90 (93)
T d2jfga1 72 PGIALA--------HPSLSAAADAG-IE 90 (93)
T ss_dssp TTSCTT--------SHHHHHHHHTT-CE
T ss_pred CCCCCC--------CHHHHHHHHcC-CC
Confidence 886542 36788888887 65
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.89 E-value=3.7e-06 Score=62.04 Aligned_cols=75 Identities=24% Similarity=0.178 Sum_probs=45.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-HhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|++|.|+||||++|+.+++.|.++. .++..+..+++... +.. ....+ ..-......+.+.+ .+++|++|
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~--~i~~~~p~~----~~~~~~~~~~~~~~---~~~~dvvf 71 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGK--KLEEIFPST----LENSILSEFDPEKV---SKNCDVLF 71 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTS--BHHHHCGGG----CCCCBCBCCCHHHH---HHHCSEEE
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCC--cccccCchh----hccccccccCHhHh---ccccceEE
Confidence 5799999999999999999998866 57777754433221 111 10111 11111222344433 45799999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 72 ~a~p~~ 77 (176)
T d1vkna1 72 TALPAG 77 (176)
T ss_dssp ECCSTT
T ss_pred EccccH
Confidence 888764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.87 E-value=9.8e-05 Score=52.29 Aligned_cols=96 Identities=20% Similarity=0.233 Sum_probs=59.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
+||.|+|+ |++|..++..|+.++ .++..++++.....-+..+..+.... .......+ ++ +.++++|+|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~----~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY----SDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG----GGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH----HHhCCCceEE
Confidence 58999996 999999999999988 48999998754332111111111111 11222222 22 2478999999
Q ss_pred EcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
.+++..... ..|....+.+++.+.+++
T Consensus 74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~ 108 (142)
T d1y6ja1 74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY 108 (142)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EecccccCcCcchhHHhhHHHHHHHHHHHHhhccC
Confidence 999866422 166777888899888887
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.86 E-value=4e-05 Score=54.49 Aligned_cols=94 Identities=19% Similarity=0.129 Sum_probs=62.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhh-----hccCCCeEEEccCCCHHHHHHHhccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLS-----FKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-----l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
|||.|+|| |.+|+.++..|+..+ .++..++++.... +....+. .......+... .|.+ .++++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~---~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~da 70 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP---QGKALDMYESGPVGLFDTKVTGS--NDYA----DTANS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH---HHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTTC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccc---hhhhhhhhcccchhcccceEEec--CCHH----HhcCC
Confidence 58999995 999999999999988 6899998874321 2211111 11223444322 2333 36799
Q ss_pred CEEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 77 DVVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 77 d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
|+|+.+++..... ..|....+.+++.+.+++
T Consensus 71 dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~ 109 (142)
T d1guza1 71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS 109 (142)
T ss_dssp SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999865422 156777888888888876
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.86 E-value=1.6e-05 Score=60.39 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=51.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC-------------CHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN-------------DYQSLV 70 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-------------d~~~l~ 70 (312)
|+|.|+| .|++|..++..|.+.||+|++++.+ +++.+. +......+...++. -..++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n-----~~~i~~---ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~ 71 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVS-----STKIDL---INQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHH---HHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCC-----HHHHHH---hcccCCcccchhhhhhhhhhhcccccccCCCHH
Confidence 6899998 9999999999999999999999887 555533 22222211111110 012345
Q ss_pred HHhccCCEEEEcCCCCc
Q 021470 71 NAVKLVDVVICAISGVH 87 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~ 87 (312)
++++++|++|.|.+.+.
T Consensus 72 ~~i~~~d~i~i~VpTP~ 88 (202)
T d1mv8a2 72 KAVLDSDVSFICVGTPS 88 (202)
T ss_dssp HHHHTCSEEEECCCCCB
T ss_pred HHHhhCCEEEEecCccc
Confidence 66778999999998754
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.86 E-value=0.00014 Score=51.29 Aligned_cols=91 Identities=21% Similarity=0.247 Sum_probs=62.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH--Hhhhh---c-cCCCeEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ--MLLSF---K-EQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~l---~-~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
|||.|+|+ |.+|..++..|+.++ .++..++++ +++.. .++.. . ........+| .+ .+++
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~-----~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~----~~~~ 67 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVD-----KKRAEGDALDLIHGTPFTRRANIYAGD---YA----DLKG 67 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSCCCEEEECC---GG----GGTT
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecc-----cccccchhccccccccccccccccCCc---HH----HhcC
Confidence 68999995 999999999998887 589998887 44432 11111 1 1233443333 22 3679
Q ss_pred CCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++...... .|....+.+++.+.+.+
T Consensus 68 adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~ 107 (140)
T d1a5za1 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA 107 (140)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcC
Confidence 999999998755321 56777888888888887
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.82 E-value=4.3e-05 Score=56.69 Aligned_cols=99 Identities=22% Similarity=0.187 Sum_probs=54.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEE-CCCCCCChHHHH-Hhhhhcc-CCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLH-RPEIGVDIEKVQ-MLLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~-r~~~~~~~~~~~-~~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
|++|+|+||||++|+.+++.|.++. .++..+. ++......++.. ....+.. ........ .+ ....+.++|+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~dv 75 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM--SD---VRDFSADVDV 75 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE--SC---GGGTCTTCCE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc--hh---hhhhhcccce
Confidence 5799999999999999999999875 6776653 322111111111 1111111 11112111 12 1222457999
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+|.+.+.. ....++..+.+.+ ++.+=.|
T Consensus 76 vf~alp~~--------~s~~~~~~~~~~~-~~vIDlS 103 (179)
T d2g17a1 76 VFLATAHE--------VSHDLAPQFLQAG-CVVFDLS 103 (179)
T ss_dssp EEECSCHH--------HHHHHHHHHHHTT-CEEEECS
T ss_pred eeccccch--------hHHHHhhhhhhcC-ceeeccc
Confidence 99997753 2345556666666 4333344
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.82 E-value=3.8e-05 Score=57.16 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=54.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEE-E-ccCCCHHHHHHHhc--cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-S-GSFNDYQSLVNAVK--LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-~-~D~~d~~~l~~~~~--~~d~v 79 (312)
.+|+|+||+|.+|...++.....|.+|++++|+ ++|.+.++.+ ++..+ . -|-...+.+.+... ++|+|
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~-----~~~~~~~~~~---Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v 102 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS-----DEKIAYLKQI---GFDAAFNYKTVNSLEEALKKASPDGYDCY 102 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCC-----HHHHHHHHhh---hhhhhcccccccHHHHHHHHhhcCCCcee
Confidence 689999999999999999999999999999998 7777544443 44433 2 22233344444433 79999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
|.+.+.
T Consensus 103 ~D~vG~ 108 (182)
T d1v3va2 103 FDNVGG 108 (182)
T ss_dssp EESSCH
T ss_pred EEecCc
Confidence 999874
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.81 E-value=7.3e-05 Score=50.40 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=55.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.+||.|+| +|++|+-++.+..+.|+++++++.+..... ..-.-+.+.+|+.|.+.+.+... ++|+|-
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA----------~~va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA----------MHVAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG----------GGGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch----------hhcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 36899999 999999999999999999999998754421 12244788999999999998775 579885
Q ss_pred Ec
Q 021470 81 CA 82 (312)
Q Consensus 81 ~~ 82 (312)
.-
T Consensus 80 ~E 81 (111)
T d1kjqa2 80 PE 81 (111)
T ss_dssp EC
T ss_pred EE
Confidence 43
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.79 E-value=7.4e-05 Score=55.53 Aligned_cols=81 Identities=12% Similarity=0.173 Sum_probs=61.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHH-Hhhhhc-cCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQ-MLLSFK-EQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~~~l~-~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|+|+| +|..|++++.+|.+.| .+++++.|+... .++.. ..+.+. .........++.+.+.+...+..+|+|
T Consensus 18 ~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 18 GKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEF--FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTT--HHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHH--HHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 47899999 6889999999999998 588888987443 22322 122222 234556678899999999999999999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
|++.+..
T Consensus 95 IN~Tp~G 101 (182)
T d1vi2a1 95 TNGTKVG 101 (182)
T ss_dssp EECSSTT
T ss_pred ccccCCc
Confidence 9998754
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.78 E-value=2e-05 Score=58.08 Aligned_cols=72 Identities=24% Similarity=0.309 Sum_probs=52.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+|+|+||+|-+|...++.+...|.+|++++++ ++|.+.++. .+++.+ .|..+........+++|+||.+.
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~-----~~~~~~~~~---lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~ 99 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASR-----PEKLALPLA---LGAEEA-ATYAEVPERAKAWGGLDLVLEVR 99 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS-----GGGSHHHHH---TTCSEE-EEGGGHHHHHHHTTSEEEEEECS
T ss_pred CEEEEEeccccchhhhhhhhccccccccccccc-----ccccccccc---ccccee-eehhhhhhhhhcccccccccccc
Confidence 589999999999999999999999999999988 545543333 355443 25545433333456899999987
Q ss_pred C
Q 021470 84 S 84 (312)
Q Consensus 84 ~ 84 (312)
+
T Consensus 100 G 100 (171)
T d1iz0a2 100 G 100 (171)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.77 E-value=0.00021 Score=50.67 Aligned_cols=95 Identities=21% Similarity=0.339 Sum_probs=63.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-----Hhhhhcc--CCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-----MLLSFKE--QGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-----~~~~l~~--~~~~~v~~D~~d~~~l~~~~~ 74 (312)
+||.|+| .|++|..++..|+.+| .++..++++ .++++ ..+.... ....+...| .+ .++
T Consensus 2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~----~l~ 68 (146)
T d1hyha1 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDAN-----EAKVKADQIDFQDAMANLEAHGNIVIND---WA----ALA 68 (146)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS-----HHHHHHHHHHHHHHGGGSSSCCEEEESC---GG----GGT
T ss_pred CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecc-----cchhhhHHHhhhccccccCCccceeccC---HH----Hhc
Confidence 6999999 5999999999999888 588888877 44432 1111111 233444333 33 367
Q ss_pred cCCEEEEcCCCCcc--------c----cchhHhHHHHHHHHHHhCCCcee
Q 021470 75 LVDVVICAISGVHI--------R----SHQILLQLKLVDAIKEAGNVKRF 112 (312)
Q Consensus 75 ~~d~v~~~~~~~~~--------~----~~~~~~~~~l~~aa~~~~~v~~~ 112 (312)
++|+|+.++|.... + ..|....+.+++.+++++ .+-+
T Consensus 69 ~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~ai 117 (146)
T d1hyha1 69 DADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGV 117 (146)
T ss_dssp TCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSE
T ss_pred cccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeE
Confidence 99999999986431 1 146677788888888776 3433
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.77 E-value=3.5e-05 Score=56.95 Aligned_cols=73 Identities=21% Similarity=0.255 Sum_probs=53.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d~ 78 (312)
.+|||+||+|.+|...++.+...|.+|++++++ ++|.+.++.+ ++..+ .|..+. +.+.+... ++|+
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~-----~~~~~~~~~~---Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~ 100 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGT-----EEGQKIVLQN---GAHEV-FNHREVNYIDKIKKYVGEKGIDI 100 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS-----HHHHHHHHHT---TCSEE-EETTSTTHHHHHHHHHCTTCEEE
T ss_pred CEEEEEeccccccccccccccccCccccccccc-----cccccccccc---Ccccc-cccccccHHHHhhhhhccCCceE
Confidence 589999999999999999999999999999988 7777554443 44333 355544 33333333 5899
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
||.+.+.
T Consensus 101 v~d~~g~ 107 (174)
T d1yb5a2 101 IIEMLAN 107 (174)
T ss_dssp EEESCHH
T ss_pred EeecccH
Confidence 9998763
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.77 E-value=0.00024 Score=51.16 Aligned_cols=99 Identities=11% Similarity=0.169 Sum_probs=65.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhcc----CCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFKE----QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~~----~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
.+||.|+|+ |.+|..++..|..+| .++..++++ ++++. ....+.+ .+...+.. ..|.++ +++
T Consensus 20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~-----~~~a~g~alDl~h~~~~~~~~~~~~-~~d~~~----~~~ 88 (160)
T d1i0za1 20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVL-----EDKLKGEMMDLQHGSLFLQTPKIVA-DKDYSV----TAN 88 (160)
T ss_dssp SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHHHHHTGGGCCCSEEEE-CSSGGG----GTT
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cchhHHHHHHHhccccccCCCeEEe-ccchhh----ccc
Confidence 469999995 999999999999999 489999887 44432 1112211 12222221 123332 779
Q ss_pred CCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhCCCceee
Q 021470 76 VDVVICAISGVHIRS--------HQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+|+|+.+++...... .|....+.++..+++.+ -+-++
T Consensus 89 adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aii 133 (160)
T d1i0za1 89 SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCII 133 (160)
T ss_dssp CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEE
Confidence 999999999765321 56777888888888887 44433
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.77 E-value=2.8e-05 Score=56.03 Aligned_cols=67 Identities=21% Similarity=0.264 Sum_probs=49.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||.++| +|.+|+++++.|++.|++|++..|+ +++.+.+... .++.+. .+ ..++++++|+||.+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~-----~~~~~~l~~~--~g~~~~----~~---~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSS-----LERSKEIAEQ--LALPYA----MS---HQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSS-----HHHHHHHHHH--HTCCBC----SS---HHHHHHTCSEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcCh-----HHhHHhhccc--cceeee----ch---hhhhhhccceeeeec
Confidence 5899999 9999999999999999999999998 6666543221 133221 23 445567899999887
Q ss_pred CC
Q 021470 84 SG 85 (312)
Q Consensus 84 ~~ 85 (312)
.+
T Consensus 66 kp 67 (152)
T d2ahra2 66 KP 67 (152)
T ss_dssp CG
T ss_pred ch
Confidence 54
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=0.0001 Score=53.08 Aligned_cols=100 Identities=17% Similarity=0.295 Sum_probs=64.5
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHH-Hhhhhcc----CC-CeEEEccCCCHHHHHHH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQ-MLLSFKE----QG-AKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~l~~----~~-~~~v~~D~~d~~~l~~~ 72 (312)
|+..||.|+|+ |.+|..++..|..+| .++..++++ ++++. ....+.+ .+ ...+.. .|.+ .
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~-----~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~----~ 84 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDAD-----TDKLRGEALDLQHGSLFLSTPKIVFG--KDYN----V 84 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSC-----HHHHHHHHHHHHHTTTTCSCCEEEEE--SSGG----G
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCC-----chhhhccHHHHhCcchhcCCCeEEec--cchh----h
Confidence 34568999995 999999999999998 489999887 44432 1122221 11 122222 2332 3
Q ss_pred hccCCEEEEcCCCCccc--------cchhHhHHHHHHHHHHhCCCceee
Q 021470 73 VKLVDVVICAISGVHIR--------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.++|+|+.+++..... ..|....+.++....+++ -+-++
T Consensus 85 ~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~-p~~iv 132 (159)
T d2ldxa1 85 SANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PDCKI 132 (159)
T ss_dssp GTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHS-TTCEE
T ss_pred hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCeEE
Confidence 57899999999875422 156777777777777776 34433
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.76 E-value=0.00014 Score=53.31 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=60.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccC--CCHHHHHHHhc-----c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSF--NDYQSLVNAVK-----L 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~--~d~~~l~~~~~-----~ 75 (312)
.+|+|+| +|.+|...++.+...|.+|++++++ ++|.+..+.+ ++. .+..|- .+.+.+.+.+. +
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~-----~~r~~~a~~~---ga~~~~~~~~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARS-----PRRLEVAKNC---GADVTLVVDPAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CEEEEEc-ccccchhhHhhHhhhcccccccchH-----HHHHHHHHHc---CCcEEEeccccccccchhhhhhhcccccC
Confidence 5899998 7999999999999999999999998 8888665555 332 222232 34444444332 6
Q ss_pred CCEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
+|+||.+++... .....++.++..|
T Consensus 99 ~D~vid~~g~~~-------~~~~a~~~~~~~G 123 (170)
T d1e3ja2 99 PNVTIDCSGNEK-------CITIGINITRTGG 123 (170)
T ss_dssp CSEEEECSCCHH-------HHHHHHHHSCTTC
T ss_pred CceeeecCCChH-------HHHHHHHHHhcCC
Confidence 999999987632 2344556665555
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.75 E-value=5.1e-05 Score=55.78 Aligned_cols=73 Identities=18% Similarity=0.275 Sum_probs=50.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| +|..+++++.+|.+.|.+|+++.|+ ++|++.+...-.....+...++.+. ....+|+||++
T Consensus 18 ~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt-----~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~ 86 (170)
T d1nyta1 18 GLRILLIG-AGGASRGVLLPLLSLDCAVTITNRT-----VSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINA 86 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS-----HHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEEC
T ss_pred CCEEEEEC-CcHHHHHHHHHhcccceEEEeccch-----HHHHHHHHHHHhhcccccccccccc-----cccccceeecc
Confidence 47899999 6888999999999999999999998 7777544332111112222333221 13478999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
.+..
T Consensus 87 Tp~G 90 (170)
T d1nyta1 87 TSSG 90 (170)
T ss_dssp CSCG
T ss_pred cccC
Confidence 8754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.72 E-value=0.00023 Score=52.39 Aligned_cols=75 Identities=20% Similarity=0.375 Sum_probs=52.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
+.+|.|+| .|.+|..+++.|++.||+|+++.|+ +++.+.+.......... .+ ....+++.+++..+|.++.+
T Consensus 2 ~~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~-----~~~~~~l~~~~~~~~~~-~~-a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 2 QADIALIG-LAVMGQNLILNMNDHGFVVCAFNRT-----VSKVDDFLANEAKGTKV-LG-AHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp CBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----THHHHHHHHTTTTTSSC-EE-CSSHHHHHHHBCSSCEEEEC
T ss_pred CCcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCC-----HHHHHHHHHhccccccc-cc-hhhhhhhhhhhcccceEEEe
Confidence 46899999 8999999999999999999999998 66764433221111111 11 34566677777777777776
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
...
T Consensus 74 ~~~ 76 (176)
T d2pgda2 74 VKA 76 (176)
T ss_dssp SCT
T ss_pred cCc
Confidence 654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.72 E-value=2.7e-05 Score=57.91 Aligned_cols=79 Identities=19% Similarity=0.145 Sum_probs=52.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-ccCCC--eEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KEQGA--KLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~~~~--~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
|+|.|+| +|..|.+++..|.+.|++|+..+|..+ ++.......- ..+.. ..-..++.-.+++.++++++|.|+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~---~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii 76 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD---TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL 76 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG---HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc---HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhh
Confidence 6999999 899999999999999999999998522 2222211111 01111 111111223467888899999999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 77 ~avps~ 82 (180)
T d1txga2 77 LGVSTD 82 (180)
T ss_dssp ECSCGG
T ss_pred cccchh
Confidence 988643
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.72 E-value=5.6e-05 Score=53.58 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=61.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHH-hhhhc------cCCCeEEEccCCCHHHHHHHhc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQM-LLSFK------EQGAKLVSGSFNDYQSLVNAVK 74 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~l~------~~~~~~v~~D~~d~~~l~~~~~ 74 (312)
|||.|+|+ |++|..++..|..+| .++..++++ +++++- ...+. .....+... .|.+ .++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~-----~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~----~~~ 68 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIA-----EDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLK 68 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSS-----HHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----GGT
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecc-----cchhhHHHHHHhhhccccCCCCccccC--CCHH----Hhc
Confidence 69999995 999999999999888 589999887 544321 11121 122233322 1222 478
Q ss_pred cCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 75 LVDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 75 ~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
++|+|+.+++...... .|....+.+++.+++.+
T Consensus 69 ~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~ 109 (142)
T d1ojua1 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA 109 (142)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC
Confidence 9999999998654321 56667778888888776
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.72 E-value=0.00014 Score=52.25 Aligned_cols=100 Identities=16% Similarity=0.168 Sum_probs=63.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhc------cCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFK------EQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~------~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
++||.|+|+ |.+|+.++..|...+ .++..++.+... .+... ..+. ....... ++ . ...+++++
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~---~~g~a-~Dl~~~~~~~~~~~~~~-~~-~---~~~~~~~~ 76 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGM---PEGKA-LDLSHVTSVVDTNVSVR-AE-Y---SYEAALTG 76 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSH---HHHHH-HHHHHHHHHTTCCCCEE-EE-C---SHHHHHTT
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecccc---chhHH-HHHhhhccccCCeeEEe-cc-C---chhhhhcC
Confidence 578999996 999999998888888 488888776321 12211 1111 1111121 11 1 23456789
Q ss_pred CCEEEEcCCCCccc-------------cchhHhHHHHHHHHHHhCCCceee
Q 021470 76 VDVVICAISGVHIR-------------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 76 ~d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+|+|+.+++..... ..|....+.+++.+.+.+ .+-++
T Consensus 77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiv 126 (154)
T d1pzga1 77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFI 126 (154)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEE
T ss_pred CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEE
Confidence 99999999864311 146677888888888887 44444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.70 E-value=0.00039 Score=49.07 Aligned_cols=92 Identities=16% Similarity=0.263 Sum_probs=63.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHH-hhhhcc-----CCCeEEEccCCCHHHHHHHhcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQM-LLSFKE-----QGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~l~~-----~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
.||.|+|+ |++|..++..|+.+| .++..++++ +++++- ...+.+ ....+... .+.+ .+++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~-----~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~----~~~d 69 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIA-----KERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRD 69 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSS-----HHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTT
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEec-----cccchhHHHHHHhccccCCCceeecC--CCHH----HhhC
Confidence 58999996 999999999999988 589999887 544421 111221 12333322 2322 3678
Q ss_pred CCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 76 VDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 76 ~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
+|+|+.+++...... .|....+.++..+++++
T Consensus 70 aDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~ 109 (143)
T d1llda1 70 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA 109 (143)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC
Confidence 999999999765321 57777888888888887
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.69 E-value=3.5e-05 Score=57.43 Aligned_cols=73 Identities=27% Similarity=0.395 Sum_probs=54.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d~ 78 (312)
.+|||+||+|.+|...++.+...|.+|++++++ +++.+.++ ..++..+ .|..++ +.+.+... ++|+
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~-----~~~~~~l~---~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~ 97 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS-----DAKREMLS---RLGVEYV-GDSRSVDFADEILELTDGYGVDV 97 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHH---TTCCSEE-EETTCSTHHHHHHHHTTTCCEEE
T ss_pred CEEEEECCCCCcccccchhhccccccceeeecc-----cccccccc---ccccccc-ccCCccCHHHHHHHHhCCCCEEE
Confidence 589999999999999999999999999999998 77765444 4455443 344443 44444433 6999
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
||.+.+.
T Consensus 98 v~d~~g~ 104 (183)
T d1pqwa_ 98 VLNSLAG 104 (183)
T ss_dssp EEECCCT
T ss_pred EEecccc
Confidence 9999874
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=0.00014 Score=55.77 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=54.0
Q ss_pred CcEEEEEcC----------------CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH
Q 021470 3 KSKVLIIGG----------------TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY 66 (312)
Q Consensus 3 ~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~ 66 (312)
.++||||+| ||.+|.+|++++..+|++|++++...+.. .+.++..+.. ...
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~~~~--~t~ 72 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------TPPFVKRVDV--MTA 72 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------CCTTEEEEEC--CSH
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-----------ccccccccee--hhh
Confidence 578888876 79999999999999999999998764432 1345666554 344
Q ss_pred HHH----HHHhccCCEEEEcCCCCcc
Q 021470 67 QSL----VNAVKLVDVVICAISGVHI 88 (312)
Q Consensus 67 ~~l----~~~~~~~d~v~~~~~~~~~ 88 (312)
+++ .+.+..+|++|++|+...+
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred HHHHHHHHhhhccceeEeeeechhhh
Confidence 333 3445689999999998764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=97.64 E-value=0.00015 Score=53.19 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLAL-GHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~ 36 (312)
|+++||+|+| +|++|+..++.|.+. +.+++++...
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~ 36 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSR 36 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEec
Confidence 8888999999 899999999999876 4777776544
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=3.8e-05 Score=47.88 Aligned_cols=43 Identities=19% Similarity=0.286 Sum_probs=36.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF 51 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l 51 (312)
.+|+|+||+|.+|...++.+...|.+|++++++ ++|.+.++.+
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s-----~~k~~~~~~l 75 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL 75 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECC-----HHHHHHHHHC
Confidence 579999999999999999989999999999998 6666554443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.62 E-value=3.2e-05 Score=57.54 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=45.6
Q ss_pred CCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 2 EKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 2 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.+.||.|+||||++|+.+++.|.++. .++..++.+.+...+ -......+.... +..........+.++|++|
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~Dvvf 76 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQ-FGSVFPHLITQD------LPNLVAVKDADFSNVDAVF 76 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSC-HHHHCGGGTTSC------CCCCBCGGGCCGGGCSEEE
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCc-cccccccccccc------cccchhhhhhhhcccceee
Confidence 35789999999999999999999876 577766543222211 111111111111 1111111223356899999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 77 ~alp~~ 82 (183)
T d2cvoa1 77 CCLPHG 82 (183)
T ss_dssp ECCSSS
T ss_pred eccccc
Confidence 988765
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.58 E-value=8.6e-05 Score=53.41 Aligned_cols=66 Identities=23% Similarity=0.342 Sum_probs=47.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
|+|+++| .|.+|.++++.|++.| ++|++..|+ +++.+.+.. ..++... .|. +. +.++|+||.+
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~-----~~~~~~l~~--~~~~~~~-~~~---~~----v~~~Div~la 64 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRG-----AEKRERLEK--ELGVETS-ATL---PE----LHSDDVLILA 64 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSS-----HHHHHHHHH--HTCCEEE-SSC---CC----CCTTSEEEEC
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCC-----hhHHHHhhh--hcccccc-ccc---cc----ccccceEEEe
Confidence 5899999 7999999999999888 999999998 766643322 2245433 222 11 4678999988
Q ss_pred CCC
Q 021470 83 ISG 85 (312)
Q Consensus 83 ~~~ 85 (312)
.-+
T Consensus 65 vkP 67 (152)
T d1yqga2 65 VKP 67 (152)
T ss_dssp SCH
T ss_pred cCH
Confidence 653
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.57 E-value=9.5e-05 Score=54.30 Aligned_cols=90 Identities=16% Similarity=0.155 Sum_probs=54.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
|++|+|+| .|.+|..+++.|.+.|+ +|++++|+ ++..+..... +. .....+. +. .....+|.|
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-----~~~~~~a~~~---~~~~~~~~~~---~~--~~~~~~dlI 66 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-----PESISKAVDL---GIIDEGTTSI---AK--VEDFSPDFV 66 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-----HHHHHHHHHT---TSCSEEESCG---GG--GGGTCCSEE
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-----hHHHHHHHHh---hcchhhhhhh---hh--hhccccccc
Confidence 46899999 79999999999999995 78888887 5555333322 22 1122211 11 123378999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
+.+... ....++++.....-+-..++.
T Consensus 67 ila~p~--------~~~~~vl~~l~~~~~~~~ii~ 93 (171)
T d2g5ca2 67 MLSSPV--------RTFREIAKKLSYILSEDATVT 93 (171)
T ss_dssp EECSCH--------HHHHHHHHHHHHHSCTTCEEE
T ss_pred cccCCc--------hhhhhhhhhhhcccccccccc
Confidence 988874 334455555444321334444
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.57 E-value=0.00012 Score=50.80 Aligned_cols=30 Identities=30% Similarity=0.387 Sum_probs=27.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVL 33 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~ 33 (312)
|||+|.|++|..|+.+.+.+.++++++.+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 589999999999999999999999988765
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.56 E-value=1.8e-05 Score=57.22 Aligned_cols=67 Identities=18% Similarity=0.102 Sum_probs=46.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|||.|+| .|.+|+.+++.|+++|++|++..|..+. ..... ..++.+. . +..++++.+|+||.+.
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~-----~~~~~---~~~~~~~-~------~~~e~~~~~diIi~~v 64 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSP-----STIER---ARTVGVT-E------TSEEDVYSCPVVISAV 64 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCH-----HHHHH---HHHHTCE-E------CCHHHHHTSSEEEECS
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhH-----HHHHh---hhccccc-c------cHHHHHhhcCeEEEEe
Confidence 5899998 8999999999999999999988776432 11111 1111111 1 2345677899999998
Q ss_pred CCC
Q 021470 84 SGV 86 (312)
Q Consensus 84 ~~~ 86 (312)
...
T Consensus 65 ~~~ 67 (152)
T d1i36a2 65 TPG 67 (152)
T ss_dssp CGG
T ss_pred cCc
Confidence 753
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.55 E-value=8.5e-05 Score=54.57 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=59.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-----C--eEEEEECCCCCCChHHHHHh-hhhcc---CCCeEEEccCCCHHHHHHH
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-----H--ETYVLHRPEIGVDIEKVQML-LSFKE---QGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~-~~l~~---~~~~~v~~D~~d~~~l~~~ 72 (312)
.+|.|+||+|.||++++-.|++.. . .++.+..... ..+.+-. .++.+ .....+..- + +..++
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~---~~~l~g~~mdl~d~a~~~~~~~~~~-~---~~~~~ 97 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERS---FQALEGVAMELEDSLYPLLREVSIG-I---DPYEV 97 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGG---HHHHHHHHHHHHTTTCTTEEEEEEE-S---CHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccc---cchhcchhhhhcccccccccCcccc-c---cchhh
Confidence 479999999999999999888743 1 3444443311 2222211 11221 122222221 1 24466
Q ss_pred hccCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHhC
Q 021470 73 VKLVDVVICAISGVHIRS--------HQILLQLKLVDAIKEAG 107 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~~ 107 (312)
++++|+|+.+++...... .|....+.+.+++.+..
T Consensus 98 ~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a 140 (175)
T d7mdha1 98 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA 140 (175)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence 889999999998765321 67777889999998864
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=6.3e-05 Score=55.74 Aligned_cols=75 Identities=21% Similarity=0.159 Sum_probs=55.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH---HHHHHHhc--cCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY---QSLVNAVK--LVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~--~~d 77 (312)
..+|+|+||+|.+|..+++.+...|.+|++++++ ++|.+..+.+ ++..+ .|..++ +.+.++-. ++|
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s-----~~k~~~~~~l---Ga~~v-i~~~~~d~~~~v~~~t~g~g~d 99 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT-----AQKAQSALKA---GAWQV-INYREEDLVERLKEITGGKKVR 99 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESS-----HHHHHHHHHH---TCSEE-EETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEEccccccchHHHHHHHHhCCeEeecccc-----hHHHHHHHhc---CCeEE-EECCCCCHHHHHHHHhCCCCeE
Confidence 3589999999999999999999999999999999 7777665555 44432 255443 34444433 589
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+|+.+.+..
T Consensus 100 ~v~d~~g~~ 108 (179)
T d1qora2 100 VVYDSVGRD 108 (179)
T ss_dssp EEEECSCGG
T ss_pred EEEeCccHH
Confidence 999988753
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.46 E-value=4.4e-05 Score=55.08 Aligned_cols=97 Identities=16% Similarity=0.041 Sum_probs=59.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-----C--eEEEEECCCCCCChHHHHHhh-hhc---cCCCeEEEccCCCHHHHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-----H--ETYVLHRPEIGVDIEKVQMLL-SFK---EQGAKLVSGSFNDYQSLVN 71 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~~-~l~---~~~~~~v~~D~~d~~~l~~ 71 (312)
.+||.|+||+|.+|++++..|++.+ . +++.+..+. . ..+.+.+. .+. ......+..-- + ..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~--~-~~~~~~l~~~~~~~~~~~~~~~~~~~-~---~~~ 75 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP--M-MGVLDGVLMELQDCALPLLKDVIATD-K---EEI 75 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG--G-HHHHHHHHHHHHHTCCTTEEEEEEES-C---HHH
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc--c-hhhhhhhhhhhcccccccccccccCc-c---ccc
Confidence 5799999999999999999988654 1 333333321 1 33332221 111 11222222211 2 335
Q ss_pred HhccCCEEEEcCCCCcccc--------chhHhHHHHHHHHHHh
Q 021470 72 AVKLVDVVICAISGVHIRS--------HQILLQLKLVDAIKEA 106 (312)
Q Consensus 72 ~~~~~d~v~~~~~~~~~~~--------~~~~~~~~l~~aa~~~ 106 (312)
.++++|+|+.+++...... .|....+.+.+.+.++
T Consensus 76 ~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 76 AFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp HTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 6789999999998765321 5677788888887765
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.46 E-value=0.00072 Score=49.26 Aligned_cols=99 Identities=24% Similarity=0.212 Sum_probs=61.8
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-----------HH
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-----------QS 68 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-----------~~ 68 (312)
|+ +||+|-| .|.||+.++++|+++. .+|.++.-... ...... +...+...+..+.... ..
T Consensus 1 M~-irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~---~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (172)
T d2czca2 1 MK-VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP---DFEAYR---AKELGIPVYAASEEFIPRFEKEGFEVAGT 72 (172)
T ss_dssp CC-EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC---SHHHHH---HHHTTCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred Cc-EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC---hHHHHH---hhhcCceeecccccceeeecccCccccch
Confidence 54 7999999 8999999999998876 67777754321 122211 2223344444333222 23
Q ss_pred HHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 69 LVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 69 l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+..+++++|+|+-|.|... +..-++.-.++| +++++.|.
T Consensus 73 ~~~~~~~vDvViEcTG~f~--------~~~~~~~hl~~G-~k~Vi~s~ 111 (172)
T d2czca2 73 LNDLLEKVDIIVDATPGGI--------GAKNKPLYEKAG-VKAIFQGG 111 (172)
T ss_dssp HHHHHTTCSEEEECCSTTH--------HHHHHHHHHHHT-CEEEECTT
T ss_pred hhhhhccCCEEEECCCCCC--------CHHHHHHHHHcC-CCEEEECC
Confidence 4444568999999999764 223334455678 88887654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.46 E-value=0.00052 Score=44.75 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=57.4
Q ss_pred CcEEEEEcCCchhh-HHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLG-KRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+++|.++| -|.+| +.|++.|.++|++|.+.++..+ + .. +.+...++.+..++- ++. +.++|.|+.
T Consensus 8 ~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~---~-~~---~~L~~~Gi~v~~g~~--~~~----i~~~d~vV~ 73 (96)
T d1p3da1 8 VQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADG---V-VT---QRLAQAGAKIYIGHA--EEH----IEGASVVVV 73 (96)
T ss_dssp CCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCS---H-HH---HHHHHTTCEEEESCC--GGG----GTTCSEEEE
T ss_pred CCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCC---h-hh---hHHHHCCCeEEECCc--ccc----CCCCCEEEE
Confidence 57899999 45555 6789999999999999998743 2 11 344567888776543 222 457899988
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
..+..... .-+.+|++.| ++
T Consensus 74 S~AI~~~n--------pel~~A~~~g-ip 93 (96)
T d1p3da1 74 SSAIKDDN--------PELVTSKQKR-IP 93 (96)
T ss_dssp CTTSCTTC--------HHHHHHHHTT-CC
T ss_pred CCCcCCCC--------HHHHHHHHcC-CC
Confidence 87765421 3355567766 54
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.39 E-value=0.00071 Score=48.57 Aligned_cols=92 Identities=24% Similarity=0.415 Sum_probs=69.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.-+|+|+| .|..|..-++.....|-+|++++.+ +++.+.++..-...++.. ..+.+.+.+.++.+|+||.+
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~-----~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDIN-----VERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCc-----HHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 35899999 8999999999999999999999998 777776666555555554 45788899999999999998
Q ss_pred CCCCccccchhHhHHHHHHHHH
Q 021470 83 ISGVHIRSHQILLQLKLVDAIK 104 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~ 104 (312)
+-....+. -...++..++.++
T Consensus 103 alipG~~a-P~lIt~~mv~~Mk 123 (168)
T d1pjca1 103 VLVPGRRA-PILVPASLVEQMR 123 (168)
T ss_dssp CCCTTSSC-CCCBCHHHHTTSC
T ss_pred eecCCccc-CeeecHHHHhhcC
Confidence 87654221 1223445555443
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.39 E-value=0.00057 Score=48.99 Aligned_cols=86 Identities=17% Similarity=0.192 Sum_probs=49.2
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC---eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH---ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
+|+|+||||++|+.+++.|.++.+ ++..++.+.+.. +.+....-.....+..+ ..+.++|.+|.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G--------~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~ 69 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAG--------KSLKFKDQDITIEETTE-----TAFEGVDIALF 69 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTT--------CEEEETTEEEEEEECCT-----TTTTTCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccc--------ccccccCCcccccccch-----hhhhhhhhhhh
Confidence 799999999999999999988753 444444321111 11111111222222222 23457899998
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+++.. .....+..+.+.+ .++|
T Consensus 70 ~~~~~--------~s~~~~~~~~~~~--~~VI 91 (154)
T d2gz1a1 70 SAGSS--------TSAKYAPYAVKAG--VVVV 91 (154)
T ss_dssp CSCHH--------HHHHHHHHHHHTT--CEEE
T ss_pred ccCcc--------chhhHHhhhcccc--ceeh
Confidence 87643 2445555555666 3454
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.38 E-value=0.0001 Score=54.31 Aligned_cols=75 Identities=20% Similarity=0.179 Sum_probs=50.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-HHHHHHhc--cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-QSLVNAVK--LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~l~~~~~--~~d~v~ 80 (312)
.+|||.||+|.+|...++.....|.+|++.+++ ++|.+..+. .++..+. |..+. +...+... ++|+||
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s-----~~k~~~~~~---lGa~~vi-~~~~~~~~~~~~~~~~gvD~vi 103 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK-----AAEHDYLRV---LGAKEVL-AREDVMAERIRPLDKQRWAAAV 103 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----TTCHHHHHH---TTCSEEE-ECC---------CCSCCEEEEE
T ss_pred CEEEEEeccchHHHHHHHHHHHcCCceEEecCc-----hHHHHHHHh---cccceee-ecchhHHHHHHHhhccCcCEEE
Confidence 479999999999999999998999999999998 445544343 3444332 33322 12222222 799999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+.+...
T Consensus 104 d~vgg~~ 110 (176)
T d1xa0a2 104 DPVGGRT 110 (176)
T ss_dssp ECSTTTT
T ss_pred EcCCchh
Confidence 9988653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.38 E-value=0.00025 Score=52.35 Aligned_cols=76 Identities=14% Similarity=0.223 Sum_probs=53.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc-CCC-eEEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE-QGA-KLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~-~~~-~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
|+|.|+| .|.+|..+++.|++.||+|.+++|+ +++.+.+..... ... ..... ..+.+.+...+...+.++-
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~-----~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 74 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRT-----YSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALI 74 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS-----HHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECC-----HHHHHHHHHcCCccccccchhh-hhhhhHHHHhcccceEEEE
Confidence 6899999 9999999999999999999999998 777754432211 111 11122 3456667777777777776
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
+....
T Consensus 75 ~~~~~ 79 (178)
T d1pgja2 75 LVQAG 79 (178)
T ss_dssp CCCCS
T ss_pred eecCc
Confidence 66543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.37 E-value=0.00024 Score=50.19 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=59.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhh-----hccCCCeEEEccCCCHHHHHHHhccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLS-----FKEQGAKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-----l~~~~~~~v~~D~~d~~~l~~~~~~~d 77 (312)
+||.|+|+ |.+|..++..|..++ .++..++.+... .+....+. +......+... .|.++ ++++|
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~---~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~----~~~ad 71 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV---PQGKALDLYEASPIEGFDVRVTGT--NNYAD----TANSD 71 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSH---HHHHHHHHHTTHHHHTCCCCEEEE--SCGGG----GTTCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecccc---chhHHHHhhccccccCCCCEEEec--CcHHH----hcCCC
Confidence 68999995 999999999998887 488888776321 12211111 11122333321 12222 67899
Q ss_pred EEEEcCCCCccc--------cchhHhHHHHHHHHHHhC
Q 021470 78 VVICAISGVHIR--------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 78 ~v~~~~~~~~~~--------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+.+++..... ..|....+.+++...+++
T Consensus 72 vvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~ 109 (142)
T d1uxja1 72 VIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS 109 (142)
T ss_dssp EEEECCSCC---------CHHHHHHHHHHHHHHHGGGC
T ss_pred EEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccC
Confidence 999999875421 156777788888888776
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.35 E-value=0.0012 Score=45.82 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=25.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEEE
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG-HETYVLH 34 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~ 34 (312)
||+|.|++|..|+.+++.+.+.. +++.+..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 79999999999999999887654 7776654
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.34 E-value=0.00062 Score=50.14 Aligned_cols=63 Identities=25% Similarity=0.320 Sum_probs=48.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.||+.+++.|..-|.+|++++|..... . ..-.+++.++++.+|+|+.+
T Consensus 42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~--------------~-------~~~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG--------------P-------WRFTNSLEEALREARAAVCA 99 (181)
T ss_dssp TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS--------------S-------SCCBSCSHHHHTTCSEEEEC
T ss_pred CceEEEec-cccccccceeeeecccccccccccccccc--------------c-------eeeeechhhhhhccchhhcc
Confidence 47899999 99999999999999999999998874321 0 11112467888999999887
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 100 ~pl~~ 104 (181)
T d1qp8a1 100 LPLNK 104 (181)
T ss_dssp CCCST
T ss_pred ccccc
Confidence 77654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.33 E-value=0.00019 Score=52.41 Aligned_cols=75 Identities=25% Similarity=0.298 Sum_probs=51.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+|+|+|+ |.+|...++.+...|.+|++++++ ++|.+..+.+ ++..+.-...+.+..+...+++|.++.+.
T Consensus 29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~-----~~k~~~a~~l---Ga~~~i~~~~~~~~~~~~~~~~d~vi~~~ 99 (168)
T d1piwa2 29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRS-----SRKREDAMKM---GADHYIATLEEGDWGEKYFDTFDLIVVCA 99 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHH---TCSEEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred CEEEEECC-CCcchhHHHHhhhccccccccccc-----hhHHHHhhcc---CCcEEeeccchHHHHHhhhcccceEEEEe
Confidence 58999995 999999999888889999999998 5555444444 44332211223334444556789999987
Q ss_pred CCCc
Q 021470 84 SGVH 87 (312)
Q Consensus 84 ~~~~ 87 (312)
+...
T Consensus 100 ~~~~ 103 (168)
T d1piwa2 100 SSLT 103 (168)
T ss_dssp SCST
T ss_pred cCCc
Confidence 7543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.003 Score=45.92 Aligned_cols=88 Identities=22% Similarity=0.231 Sum_probs=60.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeE-EEccCCCHHHHHHHhc-----cC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKL-VSGSFNDYQSLVNAVK-----LV 76 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~-v~~D~~d~~~l~~~~~-----~~ 76 (312)
.+|+|+|+ |.+|...+..+...|. +|++.+++ ++|.+..+.+ +++. +..+-.+.....+.+. ++
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~-----~~rl~~a~~~---Ga~~~~~~~~~~~~~~~~~~~~~~g~g~ 98 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLS-----ATRLSKAKEI---GADLVLQISKESPQEIARKVEGQLGCKP 98 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT---TCSEEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CEEEEECC-CccHHHHHHHHHHcCCceEEeccCC-----HHHHHHHHHh---CCcccccccccccccccccccccCCCCc
Confidence 58999985 9999999999999996 79999998 7787655544 4433 3344455555554443 68
Q ss_pred CEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 77 DVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 77 d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
|+||.+.+... .....++.++..|
T Consensus 99 Dvvid~~G~~~-------~~~~a~~~~~~gG 122 (171)
T d1pl8a2 99 EVTIECTGAEA-------SIQAGIYATRSGG 122 (171)
T ss_dssp SEEEECSCCHH-------HHHHHHHHSCTTC
T ss_pred eEEEeccCCch-------hHHHHHHHhcCCC
Confidence 99999998632 3344555555444
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.29 E-value=0.00063 Score=48.39 Aligned_cols=100 Identities=15% Similarity=0.228 Sum_probs=63.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhh-----hccCCCeEEEccCCCHHHHHHHhccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLS-----FKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-----l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
.+||.|+| .|.+|+.++..|..++ .++..++++... .+...++. +......+...+ +. +.++++
T Consensus 3 ~~KI~IIG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~---~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~a 72 (150)
T d1t2da1 3 KAKIVLVG-SGMIGGVMATLIVQKNLGDVVLFDIVKNM---PHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGA 72 (150)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSH---HHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeccCCc---ceeeecchhhhccccCCCcEEEecc--cc----cccCCC
Confidence 36899999 5999999998887777 688888886332 12221111 111233333322 22 236789
Q ss_pred CEEEEcCCCCccc-------------cchhHhHHHHHHHHHHhCCCceee
Q 021470 77 DVVICAISGVHIR-------------SHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 77 d~v~~~~~~~~~~-------------~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
|+|+.+++..... ..|....+.+++.+++.+ .+-++
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aiv 121 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFI 121 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEE
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEE
Confidence 9999999965321 156777888888888887 44433
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.28 E-value=0.00037 Score=50.81 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=56.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
.+|+|.|+ |.+|...++.+...|.++++++++ +++.+..+.+ ++..+ .|..+.+......+++|++|.+.
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~-----~~~~~~a~~l---Gad~~-i~~~~~~~~~~~~~~~D~vid~~ 101 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTS-----EAKREAAKAL---GADEV-VNSRNADEMAAHLKSFDFILNTV 101 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS-----GGGHHHHHHH---TCSEE-EETTCHHHHHTTTTCEEEEEECC
T ss_pred CEEEEecc-chHHHHHHHHhhcccccchhhccc-----hhHHHHHhcc---CCcEE-EECchhhHHHHhcCCCceeeeee
Confidence 58999995 889999999998999999999887 5555444444 44432 46777777766677899999998
Q ss_pred CCCc
Q 021470 84 SGVH 87 (312)
Q Consensus 84 ~~~~ 87 (312)
+...
T Consensus 102 g~~~ 105 (168)
T d1uufa2 102 AAPH 105 (168)
T ss_dssp SSCC
T ss_pred ecch
Confidence 8643
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00024 Score=53.14 Aligned_cols=35 Identities=23% Similarity=0.483 Sum_probs=33.2
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+.++|.|+| +|.+|+.++..++..|++|++++++
T Consensus 2 ~~IkkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~ 36 (192)
T d1f0ya2 2 IIVKHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQT 36 (192)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceeEEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECC
Confidence 7789999999 5999999999999999999999998
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.0001 Score=53.35 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=58.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEEE-CCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVLH-RPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|.|++|.+|+.+++.+.+. +.++.+.. |......-............++.+ .- ++...++.+|+||
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~-~~------~~~~~~~~~DViI 76 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QS------SLDAVKDDFDVFI 76 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ES------CSTTTTTSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee-ec------cHHHHhcccceEE
Confidence 579999999999999999999886 46766554 432211000000000000111111 22 2334567899999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
.+.. ...+...++.|.+.+ + .+|..+.|.
T Consensus 77 DFs~--------p~~~~~~~~~a~~~~-~-~~ViGTTG~ 105 (162)
T d1diha1 77 DFTR--------PEGTLNHLAFCRQHG-K-GMVIGTTGF 105 (162)
T ss_dssp ECSC--------HHHHHHHHHHHHHTT-C-EEEECCCCC
T ss_pred Eecc--------HHHHHHHHHHHHhcc-c-eeEEecCCC
Confidence 8764 445678889999988 4 444444343
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.0012 Score=46.76 Aligned_cols=34 Identities=18% Similarity=0.195 Sum_probs=29.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~ 36 (312)
|++|.|+|+||.||...++-+.+.. ++|.+++=.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 5799999999999999999888764 789988654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.25 E-value=0.00061 Score=50.33 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=51.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCHHHH----HHHhc--c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDYQSL----VNAVK--L 75 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~~~l----~~~~~--~ 75 (312)
.+|+|+|+ |.+|...++.+...|. +|++++++ ++|.+..+.+ ++. ++...-.+..+. .+... +
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~-----~~~~~~a~~l---Ga~~vi~~~~~~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGS-----PNRLKLAEEI---GADLTLNRRETSVEERRKAIMDITHGRG 100 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CEEEEECC-Cccchhheecccccccccccccccc-----cccccccccc---cceEEEeccccchHHHHHHHHHhhCCCC
Confidence 58999995 8999999999999995 89999998 8887665555 443 332222233222 22222 6
Q ss_pred CCEEEEcCCCC
Q 021470 76 VDVVICAISGV 86 (312)
Q Consensus 76 ~d~v~~~~~~~ 86 (312)
+|+||.+.+..
T Consensus 101 ~Dvvid~vG~~ 111 (182)
T d1vj0a2 101 ADFILEATGDS 111 (182)
T ss_dssp EEEEEECSSCT
T ss_pred ceEEeecCCch
Confidence 89999998764
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.16 E-value=0.00033 Score=51.23 Aligned_cols=71 Identities=25% Similarity=0.279 Sum_probs=50.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-hcc-CCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-FKE-QGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
.++|+|+| +|..+++++.+|.+.+-+|+++.|+ +++++.+.. +.. .++..+..|-. .+..+|++|
T Consensus 18 ~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~-----~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiI 84 (171)
T d1p77a1 18 NQHVLILG-AGGATKGVLLPLLQAQQNIVLANRT-----FSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVI 84 (171)
T ss_dssp TCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESS-----HHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEE
T ss_pred CCEEEEEC-CcHHHHHHHHHHcccCceeeeccch-----HHHHHHHHHHHhhccccchhhhccc-------cccccceee
Confidence 46899999 7888999999999877899999999 777654432 321 23334433321 246799999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
++++..
T Consensus 85 N~tp~g 90 (171)
T d1p77a1 85 NATSAG 90 (171)
T ss_dssp ECCCC-
T ss_pred eccccc
Confidence 998764
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.00079 Score=43.05 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=57.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAI 83 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~ 83 (312)
|+|-++|-.|-==+.|++.|+++|++|.+.++..+ +.. +.|...++.+..+ .+++. ++++|.|+...
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~----~~t---~~L~~~Gi~i~~g--h~~~~----i~~~d~vV~Ss 68 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEET----ERT---AYLRKLGIPIFVP--HSADN----WYDPDLVIKTP 68 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCC----HHH---HHHHHTTCCEESS--CCTTS----CCCCSEEEECT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCC----hhH---HHHHHCCCeEEee--ecccc----cCCCCEEEEec
Confidence 68888884443334789999999999999988742 122 4466778887655 23332 46799999888
Q ss_pred CCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 84 SGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
+..... .-+.+|++.| ++
T Consensus 69 AI~~~n--------pel~~A~~~g-Ip 86 (89)
T d1j6ua1 69 AVRDDN--------PEIVRARMER-VP 86 (89)
T ss_dssp TCCTTC--------HHHHHHHHTT-CC
T ss_pred CcCCCC--------HHHHHHHHcC-CC
Confidence 865422 3466777777 54
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.11 E-value=6.7e-05 Score=54.82 Aligned_cols=72 Identities=21% Similarity=0.188 Sum_probs=50.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh-----ccCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV-----KLVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~-----~~~d~ 78 (312)
.+|||+||+|-+|...++.....|.+|++++++ ++|.+.++.+ ++..+. |.. +...+.. +++|+
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s-----~~k~~~~~~l---Gad~vi-~~~--~~~~~~~~~~~~~gvd~ 93 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN-----REAADYLKQL---GASEVI-SRE--DVYDGTLKALSKQQWQG 93 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS-----SSTHHHHHHH---TCSEEE-EHH--HHCSSCCCSSCCCCEEE
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCceEEEecC-----HHHHHHHHhh---cccceE-ecc--chhchhhhcccCCCceE
Confidence 369999999999999999888899999999998 5566554544 444332 221 1111111 26899
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
|+.+.+..
T Consensus 94 vid~vgg~ 101 (167)
T d1tt7a2 94 AVDPVGGK 101 (167)
T ss_dssp EEESCCTH
T ss_pred EEecCcHH
Confidence 99988754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.06 E-value=0.0011 Score=48.18 Aligned_cols=75 Identities=23% Similarity=0.239 Sum_probs=53.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCCH-HHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFNDY-QSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d~-~~l~~~~~--~~d~ 78 (312)
.+|+|+|++|-+|...+..+...| .+|++.+++ ++|.+..+.+ ++ .++..+-.|. +.+.+... ++|+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~-----~~~~~~~~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~~d~ 100 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR-----EEAVEAAKRA---GADYVINASMQDPLAEIRRITESKGVDA 100 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS-----HHHHHHHHHH---TCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEEeccccceeeeeecccccccccccccccc-----hhhHHHHHHc---CCceeeccCCcCHHHHHHHHhhcccchh
Confidence 479999999999999999998888 689999988 7787666655 33 3333333332 33333332 5899
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
+|.+++..
T Consensus 101 vid~~g~~ 108 (170)
T d1jvba2 101 VIDLNNSE 108 (170)
T ss_dssp EEESCCCH
T ss_pred hhcccccc
Confidence 99998753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.98 E-value=0.0007 Score=50.55 Aligned_cols=66 Identities=21% Similarity=0.236 Sum_probs=47.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|..-|.+|.++++... +... ..+. ..+++.++++.+|+|+.+
T Consensus 43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~---~~~~-------~~~~--------~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN---PELE-------KKGY--------YVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC---HHHH-------HTTC--------BCSCHHHHHHHCSEEEEC
T ss_pred CCeEEEec-ccccchhHHHhHhhhcccccccCcccc---cccc-------ccee--------eecccccccccccccccc
Confidence 47999999 999999999999999999999976532 1111 1111 123467778889988877
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 104 ~plt~ 108 (197)
T d1j4aa1 104 VPDVP 108 (197)
T ss_dssp SCCCG
T ss_pred CCccc
Confidence 76544
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.93 E-value=0.00013 Score=53.85 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=50.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~~ 81 (312)
.+|+|+||+|.+|...++.....|.+|++++|+ ++|.+.++.+ ++..+. |..+.+. .+.+. ..|.++.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~-----~~k~~~~~~l---Gad~vi-~~~~~~~-~~~l~~~~~~~vvD 102 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGR-----ESTHEYLKSL---GASRVL-PRDEFAE-SRPLEKQVWAGAID 102 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESC-----GGGHHHHHHH---TEEEEE-EGGGSSS-CCSSCCCCEEEEEE
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecc-----hhHHHHHHhh---cccccc-ccccHHH-HHHHHhhcCCeeEE
Confidence 379999999999999999999999999999998 6776555544 444332 3322221 22232 4688888
Q ss_pred cCCC
Q 021470 82 AISG 85 (312)
Q Consensus 82 ~~~~ 85 (312)
+.+.
T Consensus 103 ~Vgg 106 (177)
T d1o89a2 103 TVGD 106 (177)
T ss_dssp SSCH
T ss_pred Ecch
Confidence 7753
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.92 E-value=0.0031 Score=42.54 Aligned_cols=82 Identities=24% Similarity=0.370 Sum_probs=56.1
Q ss_pred cEEEEEcCC---chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGT---GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|+|+|++ +..|..+.+.|++.||+|+.+..+.. .+ .+... ..++.++=..+|.++
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~-----------~i--~G~~~-------y~sl~~lp~~~D~vv 61 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD-----------EI--EGLKC-------YRSVRELPKDVDVIV 61 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-----------EE--TTEEC-------BSSGGGSCTTCCEEE
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccc-----------cc--cCccc-------cccchhccccceEEE
Confidence 689999988 67899999999999999888744311 00 12211 122333333689988
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.+ ......+++.|.+.| ++.+++
T Consensus 62 i~vp--------~~~~~~~l~~~~~~g-~k~v~~ 86 (116)
T d1y81a1 62 FVVP--------PKVGLQVAKEAVEAG-FKKLWF 86 (116)
T ss_dssp ECSC--------HHHHHHHHHHHHHTT-CCEEEE
T ss_pred EEeC--------HHHHHHHHHHHHhcC-CceEEe
Confidence 7765 445667888888888 887765
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.89 E-value=0.0014 Score=47.86 Aligned_cols=75 Identities=21% Similarity=0.179 Sum_probs=52.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCC-eEEEccCCC-HHHHHHHhc--cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGA-KLVSGSFND-YQSLVNAVK--LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~-~~v~~D~~d-~~~l~~~~~--~~d~ 78 (312)
.+|+|+|+ |.+|...++.+...|. +|++++++ ++|.+..+.+ ++ +++..+-.+ .+.+.+... ++|+
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~-----~~r~~~a~~l---Ga~~~i~~~~~~~~~~v~~~t~g~G~D~ 99 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR-----PICVEAAKFY---GATDILNYKNGHIEDQVMKLTNGKGVDR 99 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC-----HHHHHHHHHH---TCSEEECGGGSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEEcC-Ccchhhhhhhhhcccccccccccch-----hhhHHHHHhh---CccccccccchhHHHHHHHHhhccCcce
Confidence 57999985 9999999999998995 79999888 7777666555 33 333222122 344555543 5999
Q ss_pred EEEcCCCCc
Q 021470 79 VICAISGVH 87 (312)
Q Consensus 79 v~~~~~~~~ 87 (312)
||.+++...
T Consensus 100 vid~~g~~~ 108 (174)
T d1jqba2 100 VIMAGGGSE 108 (174)
T ss_dssp EEECSSCTT
T ss_pred EEEccCCHH
Confidence 999998643
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.87 E-value=0.0016 Score=47.62 Aligned_cols=75 Identities=11% Similarity=0.151 Sum_probs=49.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-HHHHHHhc-cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-QSLVNAVK-LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-~~l~~~~~-~~d~v~ 80 (312)
.+|+|+|+ |.+|...+..+...|. .|++.+++ ++|.+..+.+. -.+++..+-.|. +.+.+... ++|+||
T Consensus 30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~-----~~k~~~a~~~G--a~~~i~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIV-----ESRLELAKQLG--ATHVINSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESC-----HHHHHHHHHHT--CSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CEEEEeCC-CHHHhhhhhcccccccceeeeeccH-----HHHHHHHHHcC--CeEEEeCCCcCHHHHHHHHcCCCCcEEE
Confidence 57999996 9999999998888886 45556666 77776666552 124443332232 33333333 599999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+.+..
T Consensus 102 d~~G~~ 107 (174)
T d1f8fa2 102 ESTGSP 107 (174)
T ss_dssp ECSCCH
T ss_pred EcCCcH
Confidence 998864
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0032 Score=44.90 Aligned_cols=68 Identities=12% Similarity=0.170 Sum_probs=52.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+| .|.+|+.+++.|...|-+|.++... |.++- +.. ..+.++. .+.+++..+|+++.+
T Consensus 24 Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~d-----p~~al--~A~-~dG~~v~--------~~~~a~~~adivvta 86 (163)
T d1li4a1 24 GKVAVVAG-YGDVGKGCAQALRGFGARVIITEID-----PINAL--QAA-MEGYEVT--------TMDEACQEGNIFVTT 86 (163)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHH--HHH-HTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred CCEEEEec-cccccHHHHHHHHhCCCeeEeeecc-----cchhH--Hhh-cCceEee--------ehhhhhhhccEEEec
Confidence 57999999 9999999999999999999999888 65541 111 2344333 356778889999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 87 TGn~~ 91 (163)
T d1li4a1 87 TGCID 91 (163)
T ss_dssp SSCSC
T ss_pred CCCcc
Confidence 88654
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.78 E-value=0.0027 Score=46.98 Aligned_cols=98 Identities=10% Similarity=0.055 Sum_probs=63.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+++.|+| .|.||+.+++.|..-|.+|...+|..... ... . ..++ ....++.++++.+|+|+.+
T Consensus 44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~---~~~--~---~~~~-------~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPE---SVE--K---ELNL-------TWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCH---HHH--H---HHTC-------EECSSHHHHGGGCSEEEEC
T ss_pred ccceeecc-ccccchhhhhhhhccCceEEEEeeccccc---ccc--c---cccc-------cccCCHHHHHHhccchhhc
Confidence 46899999 99999999999999999999998864332 111 0 1111 1223456678888988776
Q ss_pred CCCCcccc----------------------chhHhHHHHHHHHHHhCCCceeecCCC
Q 021470 83 ISGVHIRS----------------------HQILLQLKLVDAIKEAGNVKRFLPSEF 117 (312)
Q Consensus 83 ~~~~~~~~----------------------~~~~~~~~l~~aa~~~~~v~~~v~S~~ 117 (312)
.+...... -++-....|+++..... +..+....|
T Consensus 108 ~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ivd~~aL~~aL~~g~-i~ga~lDV~ 163 (188)
T d2naca1 108 CPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGR-LAGYAGDVW 163 (188)
T ss_dssp SCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTS-EEEEEESCC
T ss_pred ccccccchhhhHHHHHHhCCCCCEEEecCchhhhhHHHHHHHHhCCC-ceeEEEeCC
Confidence 66544211 12445677787776655 655555443
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.78 E-value=0.0026 Score=46.10 Aligned_cols=66 Identities=23% Similarity=0.335 Sum_probs=47.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.++|+|+| +|..|++++..|.+.| .+|.++.|+ ++|.+.+.... +...+. +.. ...+|+||+
T Consensus 17 ~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~-----~~ka~~L~~~~--~~~~~~-~~~--------~~~~DliIN 79 (167)
T d1npya1 17 NAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARN-----VKTGQYLAALY--GYAYIN-SLE--------NQQADILVN 79 (167)
T ss_dssp TSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSC-----HHHHHHHHHHH--TCEEES-CCT--------TCCCSEEEE
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeccc-----HHHHHHHHHhh--hhhhhh-ccc--------ccchhhhee
Confidence 36899999 6999999999999999 489999998 77775543321 222221 111 246899999
Q ss_pred cCCC
Q 021470 82 AISG 85 (312)
Q Consensus 82 ~~~~ 85 (312)
+.+.
T Consensus 80 aTpi 83 (167)
T d1npya1 80 VTSI 83 (167)
T ss_dssp CSST
T ss_pred cccc
Confidence 8874
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=96.78 E-value=0.009 Score=43.15 Aligned_cols=97 Identities=21% Similarity=0.218 Sum_probs=56.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCH-----------HHHH
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDY-----------QSLV 70 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~-----------~~l~ 70 (312)
|++|.|-| -|.||+.+++.|++++ .+|.++.-.... .....+. ..+........... ..+.
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~---~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~v~g~~~ 73 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPD---FEARMAL---KKGYDLYVAIPERVKLFEKAGIEVAGTVD 73 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCS---HHHHHHH---HTTCCEEESSGGGHHHHHHTTCCCCEEHH
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcH---HHHHHHH---hcCCceEecccccceeecccCcccCCChh
Confidence 57999999 9999999999998887 677777543221 1221111 12222222211111 1344
Q ss_pred HHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 71 NAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
.+++++|+|+-|.|... ...-++.-.++| +|.++.+
T Consensus 74 ~~~~~vDvViEcTG~f~--------~~~~~~~hl~~G-~K~vi~~ 109 (171)
T d1cf2o1 74 DMLDEADIVIDCTPEGI--------GAKNLKMYKEKG-IKAIFQG 109 (171)
T ss_dssp HHHHTCSEEEECCSTTH--------HHHHHHHHHHTT-CEEEECT
T ss_pred HhhcCCCEEEEccCCCC--------CHHHHHHHHHcC-CCEEEEC
Confidence 45678999999999753 112233344567 7665544
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.77 E-value=0.0016 Score=48.30 Aligned_cols=65 Identities=25% Similarity=0.221 Sum_probs=47.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|+|+| .|.||+.+++.|..-|.+|.+.++..... .... ... +++.++++.+|+|+.+
T Consensus 44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~------------~~~~--~~~-----~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 44 GKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLP------------LGNA--TQV-----QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC------------CTTC--EEC-----SCHHHHHHHCSEEEEC
T ss_pred ceEEEEee-cccchhhhhhhcccccceEeeccccccch------------hhhh--hhh-----hhHHHHHhhccceeec
Confidence 46899999 99999999999999999999998763321 1111 111 2566778889999887
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 104 ~plt~ 108 (188)
T d1sc6a1 104 VPENP 108 (188)
T ss_dssp CCSST
T ss_pred ccCCc
Confidence 76654
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.76 E-value=0.0037 Score=45.09 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=49.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCC-HHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFND-YQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d-~~~l~~~~~~~d~v~~ 81 (312)
.+|+|.|+ |.+|...++.+...|.+|++++++ ++|.+..+.+ ++. ++..+-.| .+.+.+...+.+.++.
T Consensus 29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~-----~~~~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~ 99 (166)
T d1llua2 29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDID-----DAKLELARKL---GASLTVNARQEDPVEAIQRDIGGAHGVLV 99 (166)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESC-----HHHHHHHHHT---TCSEEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEeec-cccHHHHHHHHHHcCCccceecch-----hhHHHhhhcc---CccccccccchhHHHHHHHhhcCCccccc
Confidence 58999985 999999999888899999999998 7777655544 443 33222222 2444444456666666
Q ss_pred cCCC
Q 021470 82 AISG 85 (312)
Q Consensus 82 ~~~~ 85 (312)
+.+.
T Consensus 100 ~~~~ 103 (166)
T d1llua2 100 TAVS 103 (166)
T ss_dssp CCSC
T ss_pred cccc
Confidence 5554
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.76 E-value=0.0046 Score=43.07 Aligned_cols=84 Identities=17% Similarity=0.209 Sum_probs=58.1
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGT---GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|+|+||+ +..|..+++.|.+.||+|+.+..+... -.|... +.+ +.++-..+|.+
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~-------------i~G~~~----~~s---l~dlp~~iD~v 78 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-------------VLGRKC----YPS---VLDIPDKIEVV 78 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-------------ETTEEC----BSS---GGGCSSCCSEE
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc-------------cCCCcc----ccc---ccccCccceEE
Confidence 3689999998 789999999999999999887543110 011111 122 33333468998
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+.+.+ ......+++.|.+.| ++.+++.
T Consensus 79 ~i~vp--------~~~~~~~~~e~~~~g-~k~v~~~ 105 (139)
T d2d59a1 79 DLFVK--------PKLTMEYVEQAIKKG-AKVVWFQ 105 (139)
T ss_dssp EECSC--------HHHHHHHHHHHHHHT-CSEEEEC
T ss_pred EEEeC--------HHHHHHHHHHHHHhC-CCEEEEe
Confidence 88765 445778888888889 8877663
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.73 E-value=0.0017 Score=48.13 Aligned_cols=75 Identities=23% Similarity=0.235 Sum_probs=46.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCe-EEEEECCCCCCChHHHHHhhhhccCCCe-EEEccCCCH-HHHHHHhc-cCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHE-TYVLHRPEIGVDIEKVQMLLSFKEQGAK-LVSGSFNDY-QSLVNAVK-LVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~l~~~~~~-~v~~D~~d~-~~l~~~~~-~~d~v 79 (312)
.+|||+||+|.+|...++.....|.+ |++.+++ +++...+. ...++. ++...-.+. +.+++... ++|+|
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-----~e~~~~l~--~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv 104 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-----QEKCLFLT--SELGFDAAVNYKTGNVAEQLREACPGGVDVY 104 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-----HHHHHHHH--HHSCCSEEEETTSSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccch-----HHHHhhhh--hcccceEEeeccchhHHHHHHHHhccCceEE
Confidence 57999999999999999988888965 5555655 44442221 123333 333222232 33333322 79999
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
|.+.+.
T Consensus 105 ~D~vGg 110 (187)
T d1vj1a2 105 FDNVGG 110 (187)
T ss_dssp EESSCH
T ss_pred EecCCc
Confidence 999874
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.72 E-value=0.0051 Score=44.82 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=28.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~ 36 (312)
|-||.|.| .|.||+.++++|.+++ .+|+++...
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 46899999 9999999999999876 788888654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.72 E-value=0.0052 Score=42.22 Aligned_cols=83 Identities=22% Similarity=0.228 Sum_probs=56.3
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGT---GYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~Gat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
.++|+|+||+ |..|..+.+.|.+.| ++|+.+..+... -.+... .-++.| +=..+|.
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~-------------i~G~~~-y~sl~d------lp~~vDl 67 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE-------------VQGVKA-YKSVKD------IPDEIDL 67 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE-------------ETTEEC-BSSTTS------CSSCCSE
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc-------------cCCeEe-ecchhh------cCCCCce
Confidence 5799999998 899999999998766 688888554110 012211 112222 2236899
Q ss_pred EEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 79 VICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 79 v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
++.+.+ ......+++.|.+.| ++.++.
T Consensus 68 vvi~vp--------~~~~~~~~~~~~~~g-~~~~vi 94 (129)
T d2csua1 68 AIIVVP--------KRFVKDTLIQCGEKG-VKGVVI 94 (129)
T ss_dssp EEECSC--------HHHHHHHHHHHHHHT-CCEEEE
T ss_pred EEEecC--------hHHhHHHHHHHHHcC-CCEEEE
Confidence 988876 345667888999999 887654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.72 E-value=0.0075 Score=42.43 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=29.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~ 36 (312)
+++|.|+|+||.||....+-+.+. .++|.+++=.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 589999999999999999988775 3899988654
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=96.67 E-value=0.0031 Score=46.33 Aligned_cols=72 Identities=24% Similarity=0.367 Sum_probs=43.8
Q ss_pred CCCcEEEEEcCCchhhHHH-HHHHHhCC--CeEEEEE-CCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--
Q 021470 1 MEKSKVLIIGGTGYLGKRL-VKASLALG--HETYVLH-RPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l-~~~L~~~g--~~V~~~~-r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
|.+.+|+|+| +|.+|+.+ +..+.+.+ .+|.+++ ++ +++++.+... -+...+ +.|.+ ++++
T Consensus 1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~-----~~~~~~~~~~--~~~~~~---~~~~~---ell~~~ 66 (181)
T d1zh8a1 1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRT-----RSHAEEFAKM--VGNPAV---FDSYE---ELLESG 66 (181)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSS-----HHHHHHHHHH--HSSCEE---ESCHH---HHHHSS
T ss_pred CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEecc-----Hhhhhhhhcc--ccccce---eeeee---cccccc
Confidence 7777999999 89999874 66676644 5777664 44 5555432221 122222 23433 4444
Q ss_pred cCCEEEEcCCCC
Q 021470 75 LVDVVICAISGV 86 (312)
Q Consensus 75 ~~d~v~~~~~~~ 86 (312)
++|+|+.+.+..
T Consensus 67 ~id~v~I~tp~~ 78 (181)
T d1zh8a1 67 LVDAVDLTLPVE 78 (181)
T ss_dssp CCSEEEECCCGG
T ss_pred ccceeecccccc
Confidence 689998877653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=96.66 E-value=0.00083 Score=48.17 Aligned_cols=75 Identities=24% Similarity=0.247 Sum_probs=44.3
Q ss_pred CC-CcEEEEEcCCchhhHHH-HHHHHhCC-CeEEEEE-CCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH--hc
Q 021470 1 ME-KSKVLIIGGTGYLGKRL-VKASLALG-HETYVLH-RPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA--VK 74 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l-~~~L~~~g-~~V~~~~-r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~--~~ 74 (312)
|+ +.+|.|+| +|.+|+.+ .+.|.... .++++++ |+..+. .... ....++.... .+.+++.+. +.
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~---~~~~---a~~~~i~~~~---~~~d~l~~~~~~~ 70 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASD---GLAR---AQRMGVTTTY---AGVEGLIKLPEFA 70 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCH---HHHH---HHHTTCCEES---SHHHHHHHSGGGG
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhcc---chhh---hhhcCCcccc---cceeeeeeccccc
Confidence 66 46899999 99999865 45554444 5788875 443221 1111 1233444432 234555554 34
Q ss_pred cCCEEEEcCCC
Q 021470 75 LVDVVICAISG 85 (312)
Q Consensus 75 ~~d~v~~~~~~ 85 (312)
++|+||.+++.
T Consensus 71 ~iDiVf~ATpa 81 (157)
T d1nvmb1 71 DIDFVFDATSA 81 (157)
T ss_dssp GEEEEEECSCH
T ss_pred ccCEEEEcCCc
Confidence 79999988764
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.66 E-value=0.0041 Score=46.03 Aligned_cols=98 Identities=11% Similarity=0.041 Sum_probs=63.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+++.|+| .|.||+.+++.|..-|.+|.++++..... ... . . . . ....+++.++++.+|+|+.+
T Consensus 47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~--~~~-~-~---~-~-------~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASS--SDE-A-S---Y-Q-------ATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH--HHH-H-H---H-T-------CEECSSHHHHHHHCSEEEEC
T ss_pred ccceEEee-cccchHHHHHHHHhhcccccccccccccc--chh-h-c---c-c-------ccccCCHHHHHhhCCeEEec
Confidence 47899999 99999999999999999999998764321 111 0 0 0 0 11123567788889998777
Q ss_pred CCCCcccc-----------------c-----hhHhHHHHHHHHHHhCCCceeecCCC
Q 021470 83 ISGVHIRS-----------------H-----QILLQLKLVDAIKEAGNVKRFLPSEF 117 (312)
Q Consensus 83 ~~~~~~~~-----------------~-----~~~~~~~l~~aa~~~~~v~~~v~S~~ 117 (312)
.+...... + .+-....|+++.+... +....+..|
T Consensus 111 ~plt~~T~~li~~~~l~~mk~~a~lIN~sRG~ivde~aL~~aL~~g~-i~~a~lDV~ 166 (191)
T d1gdha1 111 APSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGR-LAYAGFDVF 166 (191)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTS-EEEEEESCC
T ss_pred CCCCchHhheecHHHhhCcCCccEEEecCCccchhhHHHHHHHHcCC-ceEEEEECC
Confidence 66544211 1 2344677788777655 555555443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.65 E-value=0.00045 Score=51.50 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=48.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|..-|.+|.+.++..... .... .++ ...+++.++++.+|+|+.+
T Consensus 49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~--------~~~-------~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERA--------LGL-------QRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHH--------HTC-------EECSSHHHHHHHCSEEEEC
T ss_pred CceEEEec-cccccccceeeeeccccceeeccCccccc-chhh--------hcc-------ccccchhhccccCCEEEEe
Confidence 47899999 99999999999999999999998864432 1110 111 1123566778889998877
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 112 ~plt~ 116 (193)
T d1mx3a1 112 CGLNE 116 (193)
T ss_dssp CCCCT
T ss_pred ecccc
Confidence 76544
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.64 E-value=0.00099 Score=49.80 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=27.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+|.|+| .|++|..++..| ++|++|++++-+
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din 31 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDIL 31 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSC
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECC
Confidence 6899998 999999998644 679999999877
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.62 E-value=0.0014 Score=48.96 Aligned_cols=65 Identities=22% Similarity=0.320 Sum_probs=47.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| .|.||+.+++.|..-|.+|+++++...... ..... . .++.++++.+|+|+.+
T Consensus 45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~~~~~-----~---~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----------HPDFD-----Y---VSLEDLFKQSDVIDLH 104 (199)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC-----------CTTCE-----E---CCHHHHHHHCSEEEEC
T ss_pred ceeeeeee-cccccccccccccccceeeeccCCccchhh-----------hcchh-----H---HHHHHHHHhcccceee
Confidence 47899999 999999999999999999999988633210 11111 2 2466777789999877
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+...
T Consensus 105 ~plt~ 109 (199)
T d1dxya1 105 VPGIE 109 (199)
T ss_dssp CCCCG
T ss_pred ecccc
Confidence 76554
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.55 E-value=0.0025 Score=46.53 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=49.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEc--cCCC-HHHHHHHhc--cCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSG--SFND-YQSLVNAVK--LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~--D~~d-~~~l~~~~~--~~d 77 (312)
.+|+|+|+ |.+|...+..+...| .+|++.+++ ++|.+....+ ++..+.- +-.+ .+...+... ++|
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~-----~~k~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~D 100 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDIN-----KDKFAKAKEV---GATECVNPQDYKKPIQEVLTEMSNGGVD 100 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCc-----HHHHHHHHHh---CCeeEEecCCchhHHHHHHHHHhcCCCC
Confidence 58999998 568999999898888 689998888 6666544433 4433322 2222 233333332 799
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
++|.+.+..
T Consensus 101 ~vid~~G~~ 109 (176)
T d2jhfa2 101 FSFEVIGRL 109 (176)
T ss_dssp EEEECSCCH
T ss_pred EEEecCCch
Confidence 999998864
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0014 Score=40.52 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=31.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
||+|.|+| +|++|+-++.+-.+-|+++++++-+.+
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~ 35 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE 35 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence 57999999 999999999999999999999987643
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.48 E-value=0.0089 Score=43.29 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=51.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
.+|+|.| +|.+|...++.+...| ..|++.+++ ++|.+..+.+. ..+++..+-.+.+...+... ++|+||
T Consensus 34 ~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~-----~~k~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~g~d~vi 105 (172)
T d1h2ba2 34 AYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVK-----EEKLKLAERLG--ADHVVDARRDPVKQVMELTRGRGVNVAM 105 (172)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESS-----HHHHHHHHHTT--CSEEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeC-CChHHHHHHHHHHhhcCcccccccch-----hHHHHHHhhcc--cceeecCcccHHHHHHHhhCCCCceEEE
Confidence 4789988 5999999999888888 577777887 77776555442 23444443223344444433 689999
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
.+++..
T Consensus 106 d~~g~~ 111 (172)
T d1h2ba2 106 DFVGSQ 111 (172)
T ss_dssp ESSCCH
T ss_pred EecCcc
Confidence 999864
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.42 E-value=0.0048 Score=45.37 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=47.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.+++.|+| .|.||+.+++.|..-|.+|.+.+|... +++.. ..+++. .++.++++.+|+|+.+
T Consensus 44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~---~~~~~------~~~~~~--------~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS---PARAA------QLGIEL--------LSLDDLLARADFISVH 105 (184)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC---HHHHH------HHTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC---hhHHh------hcCcee--------ccHHHHHhhCCEEEEc
Confidence 46899999 999999999999998999999987633 22211 112221 2466778889999877
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
++...
T Consensus 106 ~Plt~ 110 (184)
T d1ygya1 106 LPKTP 110 (184)
T ss_dssp CCCST
T ss_pred CCCCc
Confidence 77654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.39 E-value=0.0038 Score=45.50 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=47.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEE-Ecc-C-CCHHHHHHHh--ccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-SGS-F-NDYQSLVNAV--KLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-~~D-~-~d~~~l~~~~--~~~d 77 (312)
.+|+|.|+ |.+|...++.+...|. .|++.+++ ++|.+..+.+ ++..+ ..+ - .+.+...+.. .++|
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~-----~~k~~~ak~l---Ga~~~i~~~~~~~~~~~~~~~~~~~g~D 100 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDIN-----KDKFARAKEF---GATECINPQDFSKPIQEVLIEMTDGGVD 100 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhcCceEEEccc-----HHHHHHHHHh---CCcEEEeCCchhhHHHHHHHHHcCCCCc
Confidence 57999997 5689999999998995 66666666 6666555555 33332 221 1 2222222222 2799
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+||.+.+..
T Consensus 101 ~vid~~G~~ 109 (176)
T d2fzwa2 101 YSFECIGNV 109 (176)
T ss_dssp EEEECSCCH
T ss_pred EeeecCCCH
Confidence 999998754
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.31 E-value=0.01 Score=41.99 Aligned_cols=68 Identities=24% Similarity=0.256 Sum_probs=54.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|.| -|.+|+.+++.|...|-+|+++-.+ |-++- +.. -.+.++. .+.++++..|++|-+
T Consensus 23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~D-----Pi~al--qA~-mdGf~v~--------~~~~a~~~aDi~vTa 85 (163)
T d1v8ba1 23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEID-----PICAI--QAV-MEGFNVV--------TLDEIVDKGDFFITC 85 (163)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSC-----HHHHH--HHH-TTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred CCEEEEec-ccccchhHHHHHHhCCCEEEEEecC-----chhhH--HHH-hcCCccC--------chhHccccCcEEEEc
Confidence 57899999 9999999999999999999999888 76652 221 3455543 356788899999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
.+..+
T Consensus 86 TGn~~ 90 (163)
T d1v8ba1 86 TGNVD 90 (163)
T ss_dssp CSSSS
T ss_pred CCCCc
Confidence 98765
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.30 E-value=0.00021 Score=52.76 Aligned_cols=72 Identities=21% Similarity=0.259 Sum_probs=46.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhh-hhcc---CC-CeEEEccCCCHHHHHHHhccCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLL-SFKE---QG-AKLVSGSFNDYQSLVNAVKLVD 77 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~l~~---~~-~~~v~~D~~d~~~l~~~~~~~d 77 (312)
.++|+|+| +|..+++++.+|.+.| +|+++.|+ ++|++.+. .+.. .. ...+. + +.+...+..+|
T Consensus 18 ~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~-----~~ka~~l~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~d 85 (177)
T d1nvta1 18 DKNIVIYG-AGGAARAVAFELAKDN-NIIIANRT-----VEKAEALAKEIAEKLNKKFGEEVK--F---SGLDVDLDGVD 85 (177)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSS-----HHHHHHHHHHHHHHHTCCHHHHEE--E---ECTTCCCTTCC
T ss_pred CCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhh-----hhHHHHHHHHHHHhhchhhhhhhh--h---hhhhhccchhh
Confidence 47899999 7889999999997766 89999998 77775432 1211 11 01111 1 11222345689
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
.++++.+..
T Consensus 86 liIn~tp~g 94 (177)
T d1nvta1 86 IIINATPIG 94 (177)
T ss_dssp EEEECSCTT
T ss_pred hhccCCccc
Confidence 999988754
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.21 E-value=0.0081 Score=43.21 Aligned_cols=73 Identities=25% Similarity=0.274 Sum_probs=51.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCC-C-HHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFN-D-YQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~-d-~~~l~~~~~~~d~v~~ 81 (312)
.+|+|.| +|-+|...+..+...|.+|++++++ ++|.+..+. .++..+...-. | .+.+.+...+.+.++.
T Consensus 29 ~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~-----~~r~~~~k~---~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~ 99 (168)
T d1rjwa2 29 EWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIG-----DEKLELAKE---LGADLVVNPLKEDAAKFMKEKVGGVHAAVV 99 (168)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH---TTCSEEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEee-cccchhhhhHHHhcCCCeEeccCCC-----HHHhhhhhh---cCcceecccccchhhhhcccccCCCceEEe
Confidence 5789987 5999999999999999999999988 777755544 45655543322 2 3445555567777776
Q ss_pred cCCC
Q 021470 82 AISG 85 (312)
Q Consensus 82 ~~~~ 85 (312)
+++.
T Consensus 100 ~~~~ 103 (168)
T d1rjwa2 100 TAVS 103 (168)
T ss_dssp SSCC
T ss_pred ecCC
Confidence 6543
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=96.20 E-value=0.0067 Score=43.75 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=40.7
Q ss_pred cEEEEEcCCchhhHH-HHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKR-LVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~-l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
++|+|+| .|.+|+. ....|.+.+ .++.+++++ +++...+... -++..+. .|.+++.+ .++|+|+.
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~-----~~~~~~~~~~--~~~~~~~---~~~~~ll~--~~iD~V~I 68 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRN-----PKVLGTLATR--YRVSATC---TDYRDVLQ--YGVDAVMI 68 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSC-----HHHHHHHHHH--TTCCCCC---SSTTGGGG--GCCSEEEE
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECC-----HHHHHHHHHh--ccccccc---ccHHHhcc--cccceecc
Confidence 6999999 7888976 556665554 577766665 6665433221 1222122 23222221 37899987
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
+.+..
T Consensus 69 ~tp~~ 73 (167)
T d1xeaa1 69 HAATD 73 (167)
T ss_dssp CSCGG
T ss_pred ccccc
Confidence 76654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.19 E-value=0.013 Score=41.98 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=40.5
Q ss_pred CcEEEEEcCCchhhHH-HHHHHHhC-CCeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGTGYLGKR-LVKASLAL-GHETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
+++|+|+| +|.+|+. .+..|... +.+++++.-... ++.... +.+ ++.+ .++.+ .+++++|+|
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~----~~~~~~~~~~---~~~~----~~~~~---~l~~~~D~V 65 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTR----AKALPICESW---RIPY----ADSLS---SLAASCDAV 65 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSC----TTHHHHHHHH---TCCB----CSSHH---HHHTTCSEE
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechh----Hhhhhhhhcc---cccc----cccch---hhhhhcccc
Confidence 46899999 7999976 46666654 578877754322 222211 222 2221 22333 345689999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
+.+.+..
T Consensus 66 ~I~tp~~ 72 (164)
T d1tlta1 66 FVHSSTA 72 (164)
T ss_dssp EECSCTT
T ss_pred cccccch
Confidence 8877643
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.15 E-value=0.0052 Score=44.58 Aligned_cols=75 Identities=16% Similarity=0.241 Sum_probs=52.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC--------------------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF-------------------- 63 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~-------------------- 63 (312)
-+|+|+| .|-.|..-++..+..|.+|++++.+ +++.+.++.+ +..++..+.
T Consensus 30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~-----~~~~~~l~~l---~~~~i~~~~~~~~~~~~~~gyA~~~s~~~ 100 (183)
T d1l7da1 30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVR-----AATKEQVESL---GGKFITVDDEAMKTAETAGGYAKEMGEEF 100 (183)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----STTHHHHHHT---TCEECCC----------------------
T ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEecc-----HHHHHHHHHh---hcceEEEeccccccccccccchhhcCHHH
Confidence 4899999 8999999999999999999999988 4444333333 333332221
Q ss_pred --CCHHHHHHHhccCCEEEEcCCCCc
Q 021470 64 --NDYQSLVNAVKLVDVVICAISGVH 87 (312)
Q Consensus 64 --~d~~~l~~~~~~~d~v~~~~~~~~ 87 (312)
...+.+.+.+..+|+||-++-...
T Consensus 101 ~~~~~~~l~~~l~~aDlVI~talipG 126 (183)
T d1l7da1 101 RKKQAEAVLKELVKTDIAITTALIPG 126 (183)
T ss_dssp -CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHHHHHHHHhhhhheeeeecCC
Confidence 124566677778899888776554
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.13 E-value=0.0072 Score=41.07 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=30.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++++|+| .|+||-.++..|.+.|.+|+++.|+
T Consensus 20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 36899999 8999999999999999999999886
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.02 E-value=0.0095 Score=43.34 Aligned_cols=75 Identities=13% Similarity=0.201 Sum_probs=52.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEE--ccCCC-HHHHHHHh--ccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS--GSFND-YQSLVNAV--KLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~--~D~~d-~~~l~~~~--~~~d 77 (312)
.+|+|+| .|.+|...++.+...| .+|++++++ ++|.+..+.+ ++..+. -|-.+ .+.+.+.. .|+|
T Consensus 31 ~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~-----~~kl~~Ak~~---GA~~~in~~~~~~~~~~~~~~~~g~G~d 101 (176)
T d1d1ta2 31 STCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLN-----KDKFEKAMAV---GATECISPKDSTKPISEVLSEMTGNNVG 101 (176)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHH---TCSEEECGGGCSSCHHHHHHHHHTSCCC
T ss_pred CEEEEEC-CCchhHHHHHHHHHcCCceEEEecCc-----HHHHHHHHhc---CCcEEECccccchHHHHHHHHhccccce
Confidence 4799998 5999999999999999 589999998 7777665655 333322 12222 34444433 3799
Q ss_pred EEEEcCCCCc
Q 021470 78 VVICAISGVH 87 (312)
Q Consensus 78 ~v~~~~~~~~ 87 (312)
+++.+.+...
T Consensus 102 ~vi~~~g~~~ 111 (176)
T d1d1ta2 102 YTFEVIGHLE 111 (176)
T ss_dssp EEEECSCCHH
T ss_pred EEEEeCCchH
Confidence 9999988753
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.99 E-value=0.0039 Score=45.97 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|.|+| +|.+|+.++..++..|++|++++++
T Consensus 4 I~~vaViG-aG~mG~~iA~~~a~~G~~V~l~D~~ 36 (186)
T d1wdka3 4 VKQAAVLG-AGIMGGGIAYQSASKGTPILMKDIN 36 (186)
T ss_dssp CSSEEEEC-CHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46899999 5999999999999999999999998
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.98 E-value=0.0057 Score=41.22 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=32.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence 47899999 899999999999999999999998743
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.012 Score=40.15 Aligned_cols=35 Identities=26% Similarity=0.496 Sum_probs=32.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| .|++|-.++..|.+.|.+|+++.|++.
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence 36899999 899999999999999999999999753
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.98 E-value=0.0057 Score=45.17 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=49.5
Q ss_pred cEEEEE-cCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEE-Ecc---CCC-HHHHHHHh----
Q 021470 4 SKVLII-GGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLV-SGS---FND-YQSLVNAV---- 73 (312)
Q Consensus 4 ~~ilI~-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v-~~D---~~d-~~~l~~~~---- 73 (312)
.+++|. ||+|.+|...++.....|.+|++++|+.... .++.+.++ ..++..+ ..| ..+ .+.+.+..
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~-~~~~~~~~---~lGad~vi~~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL-DEVVASLK---ELGATQVITEDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH-HHHHHHHH---HHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc-chHHhhhh---hccccEEEeccccchhHHHHHHHHHHhhcc
Confidence 467775 8999999999998888999999999875543 33443333 3344333 222 111 12233332
Q ss_pred ccCCEEEEcCCC
Q 021470 74 KLVDVVICAISG 85 (312)
Q Consensus 74 ~~~d~v~~~~~~ 85 (312)
.++|+||.+.+.
T Consensus 106 ~~vdvv~D~vg~ 117 (189)
T d1gu7a2 106 GEAKLALNCVGG 117 (189)
T ss_dssp CCEEEEEESSCH
T ss_pred CCceEEEECCCc
Confidence 368999998874
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.96 E-value=0.0057 Score=41.53 Aligned_cols=58 Identities=19% Similarity=0.256 Sum_probs=41.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCC----hHHHH-HhhhhccCCCeEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVD----IEKVQ-MLLSFKEQGAKLVSG 61 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~-~~~~l~~~~~~~v~~ 61 (312)
.++++|+| .|++|-.++..|.+.|.+|+.+.|.+.... ++-.+ ..+.+...+++++..
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~~l~~~GV~i~~~ 92 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFE 92 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEES
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccccccccCCHHHHHHHHHHHHHCCcEEEeC
Confidence 46899999 899999999999999999999998854321 11112 223445556666543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.91 E-value=0.01 Score=43.09 Aligned_cols=74 Identities=16% Similarity=0.143 Sum_probs=50.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeE-EEccCC--CHHHHHHHh--ccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKL-VSGSFN--DYQSLVNAV--KLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~-v~~D~~--d~~~l~~~~--~~~d 77 (312)
.+|+|+| .|.+|...+..+...|. +|++..++ ++|.+..+.+ ++.. +...-. ..+.+.+.. .++|
T Consensus 30 ~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~-----~~r~~~a~~~---Ga~~~i~~~~~~~~~~~~~~~~~~~G~d 100 (174)
T d1e3ia2 30 STCAVFG-LGCVGLSAIIGCKIAGASRIIAIDIN-----GEKFPKAKAL---GATDCLNPRELDKPVQDVITELTAGGVD 100 (174)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEEC-CChHHHHHHHHHHHhCCceeeeeccc-----hHHHHHHHHh---CCCcccCCccchhhhhhhHhhhhcCCCc
Confidence 5899998 69999999999999996 67777777 6666555554 4433 322221 223333333 3799
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
++|.+++..
T Consensus 101 ~vie~~G~~ 109 (174)
T d1e3ia2 101 YSLDCAGTA 109 (174)
T ss_dssp EEEESSCCH
T ss_pred EEEEecccc
Confidence 999999864
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.91 E-value=0.012 Score=43.76 Aligned_cols=67 Identities=22% Similarity=0.279 Sum_probs=48.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~~ 81 (312)
.++|+|-| -|.+|+++++.|.+.|.+|++.+.+ +.+..... ..+.+.+ +.+ +++. .||+++-
T Consensus 27 gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d-----~~~~~~~~---~~g~~~~-----~~~---~~~~~~~DI~iP 89 (201)
T d1c1da1 27 GLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD-----TERVAHAV---ALGHTAV-----ALE---DVLSTPCDVFAP 89 (201)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHH---HTTCEEC-----CGG---GGGGCCCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch-----HHHHHHHH---hhccccc-----Ccc---ccccccceeeec
Confidence 47899999 9999999999999999999988766 55543322 3344443 222 2344 8999998
Q ss_pred cCCCC
Q 021470 82 AISGV 86 (312)
Q Consensus 82 ~~~~~ 86 (312)
|+...
T Consensus 90 cA~~~ 94 (201)
T d1c1da1 90 CAMGG 94 (201)
T ss_dssp CSCSC
T ss_pred ccccc
Confidence 87643
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.89 E-value=0.0097 Score=43.20 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=50.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEE-ccCCC--HHHHHHHhc--cCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVS-GSFND--YQSLVNAVK--LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~-~D~~d--~~~l~~~~~--~~d 77 (312)
.+|+|+| .|.+|...++.+...| .+|++.+++ ++|.+..+.+ +++.+. ..-.| .+...+... ++|
T Consensus 29 ~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~-----~~kl~~a~~l---Ga~~~i~~~~~d~~~~~~~~~~~~~G~d 99 (174)
T d1p0fa2 29 STCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTH-----KDKFPKAIEL---GATECLNPKDYDKPIYEVICEKTNGGVD 99 (174)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSC-----GGGHHHHHHT---TCSEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEEC-CCchhHHHHHHHHHcCCceeeccCCh-----HHHHHHHHHc---CCcEEEcCCCchhHHHHHHHHhcCCCCc
Confidence 5899999 5999999999999999 578888887 6666555544 444332 21122 233333332 799
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
++|.+++..
T Consensus 100 ~vid~~g~~ 108 (174)
T d1p0fa2 100 YAVECAGRI 108 (174)
T ss_dssp EEEECSCCH
T ss_pred EEEEcCCCc
Confidence 999998764
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.88 E-value=0.057 Score=39.20 Aligned_cols=73 Identities=14% Similarity=0.272 Sum_probs=44.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhC-CCeEEEE-ECCCCCCChHHHHHhhh-hcc-CCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLAL-GHETYVL-HRPEIGVDIEKVQMLLS-FKE-QGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~-l~~-~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
+.+|+|+| .|.+|+..++.|... +.+|+++ +++ ++++..+.. ..- ....+ +.|.+++-+ -.++|+
T Consensus 1 kiki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~ 69 (184)
T d1ydwa1 1 QIRIGVMG-CADIARKVSRAIHLAPNATISGVASRS-----LEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDA 69 (184)
T ss_dssp CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSS-----HHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCE
T ss_pred CeEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCC-----ccccccchhccccccceee----cCcHHHhhh-ccccce
Confidence 36899999 799999999988776 4788876 454 555533222 111 11222 234444333 136899
Q ss_pred EEEcCCCC
Q 021470 79 VICAISGV 86 (312)
Q Consensus 79 v~~~~~~~ 86 (312)
|+.+.+..
T Consensus 70 v~I~tp~~ 77 (184)
T d1ydwa1 70 LYVPLPTS 77 (184)
T ss_dssp EEECCCGG
T ss_pred eeecccch
Confidence 99776553
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.87 E-value=0.0053 Score=47.46 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.++|+|+| .|..|...+..|.++|++|+++.|..
T Consensus 6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 46899999 89999999999999999999999863
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.82 E-value=0.062 Score=37.88 Aligned_cols=30 Identities=27% Similarity=0.251 Sum_probs=26.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
||.++| .|.+|..+++.|++.|+.+ +..|+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~ 31 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRT 31 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSS
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCC
Confidence 689999 8999999999999988866 46666
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.81 E-value=0.0062 Score=41.40 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| +|++|-.++..|.+.|.+|+++.|.+.
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence 47899999 899999999999999999999988743
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.79 E-value=0.0065 Score=40.88 Aligned_cols=35 Identities=26% Similarity=0.455 Sum_probs=31.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++|+|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence 36899999 899999999999999999999988743
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.75 E-value=0.0082 Score=40.56 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=32.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| +|+||-.++..|.+.|.+|+++.|...
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence 47899999 999999999999999999999998754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.74 E-value=0.007 Score=40.80 Aligned_cols=35 Identities=29% Similarity=0.605 Sum_probs=31.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++|+|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence 46899999 899999999999999999999998743
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.70 E-value=0.038 Score=40.69 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=51.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCC---HHHHHHHhc--cC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFND---YQSLVNAVK--LV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d---~~~l~~~~~--~~ 76 (312)
..+|+|+| +|-+|...+..+...| .+|++.+++ ++|.+..+.+ ++..+. |..+ .+.+.+... ++
T Consensus 26 G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~-----~~rl~~a~~~---Ga~~~~-~~~~~~~~~~i~~~t~g~g~ 95 (195)
T d1kola2 26 GSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLN-----PARLAHAKAQ---GFEIAD-LSLDTPLHEQIAALLGEPEV 95 (195)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESC-----HHHHHHHHHT---TCEEEE-TTSSSCHHHHHHHHHSSSCE
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhhcccceeeeccc-----chhhHhhhhc---cccEEE-eCCCcCHHHHHHHHhCCCCc
Confidence 35899998 5999988888777777 488888888 7777555444 566554 3322 244444444 68
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|++|.+.+..
T Consensus 96 D~vid~vG~~ 105 (195)
T d1kola2 96 DCAVDAVGFE 105 (195)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECcccc
Confidence 9999998854
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.68 E-value=0.012 Score=40.19 Aligned_cols=87 Identities=18% Similarity=0.195 Sum_probs=56.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHh-CCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLA-LGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~~ 81 (312)
-+|+|.| +|..|+.+++++.. .++++.++.-+.... ....-.|+.+.. .+.+.+... .++.++.
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k--------~G~~I~Gi~V~~-----~~~l~~~~~~~i~iai~ 69 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEK--------VGRPVRGGVIEH-----VDLLPQRVPGRIEIALL 69 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTT--------TTCEETTEEEEE-----GGGHHHHSTTTCCEEEE
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHh--------cCCEECCEEEec-----HHHHHHHHhhcccEEEE
Confidence 4799999 89999999998754 458999886653221 111123555542 234555544 5666666
Q ss_pred cCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 82 AISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+++. ...+.+++.|.+.| ++.+.
T Consensus 70 ~i~~--------~~~~~I~d~l~~~g-Ik~I~ 92 (126)
T d2dt5a2 70 TVPR--------EAAQKAADLLVAAG-IKGIL 92 (126)
T ss_dssp CSCH--------HHHHHHHHHHHHHT-CCEEE
T ss_pred eCCH--------HHHHHHHHHHHHcC-CCEEe
Confidence 5543 34567888899999 88665
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.65 E-value=0.009 Score=40.63 Aligned_cols=35 Identities=26% Similarity=0.459 Sum_probs=31.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++|+|+| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 30 ~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 30 VNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence 36899999 899999999999999999999988743
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.50 E-value=0.009 Score=40.53 Aligned_cols=34 Identities=26% Similarity=0.535 Sum_probs=31.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
++++|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 5799999 899999999999999999999988743
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=95.49 E-value=0.025 Score=39.07 Aligned_cols=86 Identities=8% Similarity=0.044 Sum_probs=54.3
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIGGT---GYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++|+|+||| +..|..+++.|++.|++++.+.-+.... .+ .+. .+ +.+ +.+.-..+|.+
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~---------~i--~g~---~~-~~~---l~~i~~~iD~v 74 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE---------EL--FGE---EA-VAS---LLDLKEPVDIL 74 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS---------EE--TTE---EC-BSS---GGGCCSCCSEE
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc---------ee--ece---ec-ccc---hhhccCCCceE
Confidence 4689999998 5689999999999999998774331100 00 111 11 112 22222368988
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
+.+... .....+++.|.+.| ++.+++.
T Consensus 75 ~v~~p~--------~~v~~~v~~~~~~g-~k~i~~q 101 (136)
T d1iuka_ 75 DVFRPP--------SALMDHLPEVLALR-PGLVWLQ 101 (136)
T ss_dssp EECSCH--------HHHTTTHHHHHHHC-CSCEEEC
T ss_pred EEeccH--------HHHHHHHHHHHhhC-CCeEEEe
Confidence 888754 33456677777888 8776653
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.44 E-value=0.0065 Score=43.47 Aligned_cols=68 Identities=26% Similarity=0.272 Sum_probs=52.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++|.|+| -|.+|.+=+..|.++|.+|++--|..+.+ -+++ ...++++. ++.++.+.+|+|..+
T Consensus 16 ~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s-~~~A------~~~Gf~v~--------~~~eA~~~aDiim~L 79 (182)
T d1np3a2 16 GKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSAT-VAKA------EAHGLKVA--------DVKTAVAAADVVMIL 79 (182)
T ss_dssp TSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHH-HHHH------HHTTCEEE--------CHHHHHHTCSEEEEC
T ss_pred CCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCcc-HHHH------hhhccccc--------cHHHHhhhcCeeeee
Confidence 47899999 99999999999999999999988875532 2232 24566553 466778899999999
Q ss_pred CCCC
Q 021470 83 ISGV 86 (312)
Q Consensus 83 ~~~~ 86 (312)
++..
T Consensus 80 ~PD~ 83 (182)
T d1np3a2 80 TPDE 83 (182)
T ss_dssp SCHH
T ss_pred cchH
Confidence 8743
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.44 E-value=0.014 Score=39.58 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=32.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG 39 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 39 (312)
.++++|+| .|++|-.++..|.+.|.+|+++.|++..
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 46899999 8999999999999999999999987543
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.35 E-value=0.0096 Score=39.91 Aligned_cols=35 Identities=29% Similarity=0.468 Sum_probs=31.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| .|++|-.++..|.+.|.+|+++.|.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 47899999 899999999999999999999988743
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=95.31 E-value=0.0013 Score=46.96 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=38.0
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
|-++| +|.+|+++++.|.+.++.+.+..|+ +++.+.+.... +.. ..+ ..++++.+|+||.+..+
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~-----~~~~~~l~~~~--~~~--~~~------~~~~~~~~DiVil~v~d 65 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRS-----IDRARNLAEVY--GGK--AAT------LEKHPELNGVVFVIVPD 65 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSS-----HHHHHHHHHHT--CCC--CCS------SCCCCC---CEEECSCT
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCC-----hhhhcchhhcc--ccc--ccc------hhhhhccCcEEEEeccc
Confidence 45788 9999999999876544444678888 77775544331 111 112 22456789999999865
Q ss_pred C
Q 021470 86 V 86 (312)
Q Consensus 86 ~ 86 (312)
.
T Consensus 66 ~ 66 (153)
T d2i76a2 66 R 66 (153)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=95.27 E-value=0.057 Score=39.40 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=58.6
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCC-----CeEEEEECCCCCCChHHHHHhhhhcc------CCCe------------
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALG-----HETYVLHRPEIGVDIEKVQMLLSFKE------QGAK------------ 57 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~~------------ 57 (312)
|+ ++|.|-| =|.||+.+.+++++++ .+|.++.-...+ ++....+-...+ ..++
T Consensus 1 M~-ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~--~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~ 76 (190)
T d1k3ta1 1 MP-IKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTD--AEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDD 76 (190)
T ss_dssp CC-EEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCC--HHHHHHHHHEETTTEECSSCEEEECSSTTCSSCC
T ss_pred CC-eEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCC--HHHHHHHhhccccccCCCceEEEccCcccccccc
Confidence 65 7999999 9999999999998865 255554332111 444433322211 0111
Q ss_pred --EE------Ec-cCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 58 --LV------SG-SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 58 --~v------~~-D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
++ .. .-.|++++.=.-.++|+|+-|.|.... +..++.-.++| +++++.|.
T Consensus 77 ~~i~~g~~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~--------~~~a~~hl~~G-akkViiSA 135 (190)
T d1k3ta1 77 TLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTA--------KAAAEGHLRGG-ARKVVISA 135 (190)
T ss_dssp EEEETTEEEEEEECCSCGGGSCHHHHTCCEEEECSSSCCB--------HHHHTHHHHTT-CSEEEESS
T ss_pred ceEEcCceEEecccCCChhHCCHhhcCCcEEEEecccccc--------cccchhhcccC-cceeeecc
Confidence 11 11 123455533222389999999997652 12222233567 89998763
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.20 E-value=0.013 Score=40.46 Aligned_cols=35 Identities=17% Similarity=0.461 Sum_probs=31.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++|+|+| +|++|-.++..|.+.|.+|+++.+.+.
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 46899999 999999999999999999999988744
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.17 E-value=0.023 Score=42.24 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLH 34 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~ 34 (312)
|||+++| ++..|..+++.|+++|++|.++.
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~ 30 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVF 30 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEE
Confidence 6899998 88999999999999999998764
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.10 E-value=0.2 Score=38.08 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=65.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCC--------------ChHHHHHhh-hhc--cCCCeEEEccC-C
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGV--------------DIEKVQMLL-SFK--EQGAKLVSGSF-N 64 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--------------~~~~~~~~~-~l~--~~~~~~v~~D~-~ 64 (312)
.+|+|+| .|.+|.+++..|...| -++++++.+.-.. ...|...+. .+. .+.+.+...+. .
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~ 109 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 109 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhh
Confidence 5899999 8889999999999999 4777775431110 012333221 121 34566655544 3
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceee
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFL 113 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v 113 (312)
+.+.....+...|+++.+... ......+-++|.+.+ ++.+.
T Consensus 110 ~~~~~~~~~~~~divid~~d~-------~~~~~~in~~~~~~~-ip~i~ 150 (247)
T d1jw9b_ 110 DDAELAALIAEHDLVLDCTDN-------VAVRNQLNAGCFAAK-VPLVS 150 (247)
T ss_dssp CHHHHHHHHHTSSEEEECCSS-------HHHHHHHHHHHHHHT-CCEEE
T ss_pred hhccccccccccceeeeccch-------hhhhhhHHHHHHHhC-CCccc
Confidence 556666777899999987643 444556677788888 55443
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=95.03 E-value=0.076 Score=37.89 Aligned_cols=100 Identities=21% Similarity=0.205 Sum_probs=60.2
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccC------CC-----------e-EEEccCCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQ------GA-----------K-LVSGSFND 65 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~------~~-----------~-~v~~D~~d 65 (312)
|+|.|-| =|.||+.+.+.|.+++.+|.++.-. . . ++....+....+- .+ + +....-.|
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~-~-~-~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~ 76 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL-T-D-NKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD 76 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS-S-C-HHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC-c-c-hhhhhheeecccccCccccccccccceeEecceeEEEEecCC
Confidence 5899998 9999999999999999999888543 1 1 4444332222110 00 1 11122234
Q ss_pred HHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 66 ~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
++.+.=.-.++|+|+-|.|.... ...++.-.+.| +++++.|.
T Consensus 77 p~~i~W~~~gvdiViEcTG~f~~--------~~~~~~hl~~g-akkViiSA 118 (168)
T d2g82a1 77 PKEIPWAEAGVGVVIESTGVFTD--------ADKAKAHLEGG-AKKVIITA 118 (168)
T ss_dssp GGGCCTGGGTEEEEEECSSSCCB--------HHHHTHHHHTT-CSEEEESS
T ss_pred hHHCcccccCCceeEeccccccc--------hHHhhhhhccc-cceeeecc
Confidence 55444323489999999997652 12223333457 89999863
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.92 E-value=0.18 Score=33.39 Aligned_cols=90 Identities=22% Similarity=0.227 Sum_probs=59.4
Q ss_pred CcEEEEEcCCc----------hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTG----------YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++|+|+|+.. +.+.+.+++|.+.|++++.+.-++.... ....-..-+....-..+.+.+.
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs---------td~d~aD~lYfeplt~e~v~~I 74 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS---------TDYDTSDRLYFEPVTLEDVLEI 74 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST---------TSTTSSSEEECCCCSHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh---------cChhhcCceEEccCCHHHHHHH
Confidence 57999999533 6788999999999999999977744321 0011223334444567888887
Q ss_pred hc--cCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 73 VK--LVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 73 ~~--~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
++ ++|.|+...|. +...|+.....+.| ++
T Consensus 75 i~~E~p~~ii~~~GG--------Qtalnla~~L~~~g-v~ 105 (121)
T d1a9xa4 75 VRIEKPKGVIVQYGG--------QTPLKLARALEAAG-VP 105 (121)
T ss_dssp HHHHCCSEEECSSST--------HHHHTTHHHHHHTT-CC
T ss_pred HHHhCCCEEEeehhh--------hhHHHHHHHHHHcC-Cc
Confidence 65 79999866553 22445555566777 64
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=94.88 E-value=0.037 Score=41.08 Aligned_cols=80 Identities=18% Similarity=0.096 Sum_probs=46.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH---HHhhhhccCCCeEEE-ccCCCHHHHHHHhc-cCCE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV---QMLLSFKEQGAKLVS-GSFNDYQSLVNAVK-LVDV 78 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~l~~~~~~~v~-~D~~d~~~l~~~~~-~~d~ 78 (312)
|||+++| ++..|..+++.|++.|++|.++.-.++.. ..+. ...+.....++.+.. .++.+++.++..-+ ++|.
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~-~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dl 78 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNP-GEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDV 78 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC-------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCC-CcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccc
Confidence 5888997 77789999999999999997765322110 0000 001111233566555 35555554443322 6888
Q ss_pred EEEcCCC
Q 021470 79 VICAISG 85 (312)
Q Consensus 79 v~~~~~~ 85 (312)
++.+...
T Consensus 79 ii~~g~~ 85 (203)
T d2blna2 79 IFSFYYR 85 (203)
T ss_dssp EEEESCC
T ss_pred eeeeecc
Confidence 8776543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=94.86 E-value=0.045 Score=38.87 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=30.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|+|+|.+.-+|+.++..|.++|.+|+.+...
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~ 70 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 70 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred cceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence 5799999999999999999999999999887554
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.69 E-value=0.018 Score=40.53 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=29.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|||+| .|.+|.+-++.|++.|-+|++++..
T Consensus 13 gkrvLViG-gG~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 13 DKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp TCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999 5999999999999999999999654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.68 E-value=0.12 Score=36.88 Aligned_cols=81 Identities=17% Similarity=0.142 Sum_probs=52.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICA 82 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~ 82 (312)
.++++|+|-+.-+|+-++..|+++|..|+.+..+.... ..+. ..+.-.....-.......+.+++....+|+++..
T Consensus 29 GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsa 104 (171)
T d1edza1 29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRG---ESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 104 (171)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESC---CCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccc---cceeeeeeccccccccchhHHhhccccCCEEEEc
Confidence 47999999999999999999999999998775441100 0000 0000001111111123567788888899999999
Q ss_pred CCCCc
Q 021470 83 ISGVH 87 (312)
Q Consensus 83 ~~~~~ 87 (312)
+|...
T Consensus 105 vG~p~ 109 (171)
T d1edza1 105 VPSEN 109 (171)
T ss_dssp CCCTT
T ss_pred cCCCc
Confidence 88754
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.63 E-value=0.02 Score=38.96 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=31.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
.++++|+| .|+||-.++..|.+.|.+|+++.|.+.
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 46899999 899999999999999999999988743
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=94.51 E-value=0.1 Score=41.84 Aligned_cols=72 Identities=24% Similarity=0.249 Sum_probs=53.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-C-CeEEEEECCCCCCChHHHHH-hhhhcc-CCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-G-HETYVLHRPEIGVDIEKVQM-LLSFKE-QGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~-~~~l~~-~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++++|+| +|.++..-++++++- + .+|++++|+ +++... .+.+.. .++++..++ +++++++++|+|
T Consensus 129 ~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~-----~~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADIi 197 (340)
T d1x7da_ 129 RKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTD-----PLATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDII 197 (340)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSEE
T ss_pred ceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecC-----hHHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCce
Confidence 6789999 999999988888654 4 799999998 666543 344433 467776653 467788999999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
+.+.+..
T Consensus 198 ~t~Tas~ 204 (340)
T d1x7da_ 198 TTVTADK 204 (340)
T ss_dssp EECCCCS
T ss_pred eeccccC
Confidence 9877643
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.51 E-value=0.23 Score=35.42 Aligned_cols=74 Identities=20% Similarity=0.160 Sum_probs=46.1
Q ss_pred CcEEEEEcCCchhhHH--HHHHHHhC----CCeEEEEECCCCCCChHHHHHhh----h-hc--cCCCeEEEccCCCHHHH
Q 021470 3 KSKVLIIGGTGYLGKR--LVKASLAL----GHETYVLHRPEIGVDIEKVQMLL----S-FK--EQGAKLVSGSFNDYQSL 69 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~----~-l~--~~~~~~v~~D~~d~~~l 69 (312)
.|||.|+| +|.+|.. ++..|+.. +.++..++.+ +++.+... . .. ....++... + +.
T Consensus 2 ~mKI~iIG-aGsvg~t~~~~~~l~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~i~~~--t---d~ 70 (171)
T d1obba1 2 SVKIGIIG-AGSAVFSLRLVSDLCKTPGLSGSTVTLMDID-----EERLDAILTIAKKYVEEVGADLKFEKT--M---NL 70 (171)
T ss_dssp CCEEEEET-TTCHHHHHHHHHHHHTCGGGTTCEEEEECSC-----HHHHHHHHHHHHHHHHHTTCCCEEEEE--S---CH
T ss_pred CcEEEEEC-CCHHHhHHHHHHHHHhccccCCCEEEEEeCC-----chHHHHHHHHHHHHHHhcCCCeEEEEe--C---Ch
Confidence 37999999 5888864 34445433 3589999998 65553211 1 11 123333222 2 35
Q ss_pred HHHhccCCEEEEcCCCCc
Q 021470 70 VNAVKLVDVVICAISGVH 87 (312)
Q Consensus 70 ~~~~~~~d~v~~~~~~~~ 87 (312)
.++++++|+|++.++...
T Consensus 71 ~eaL~dad~Vv~~~~~g~ 88 (171)
T d1obba1 71 DDVIIDADFVINTAMVGG 88 (171)
T ss_dssp HHHHTTCSEEEECCCTTH
T ss_pred hhcccCCCeEeeeccccc
Confidence 567899999999988765
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.48 E-value=0.049 Score=39.17 Aligned_cols=74 Identities=19% Similarity=0.219 Sum_probs=47.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeE-EEccCC--CHHHHHHHh--ccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKL-VSGSFN--DYQSLVNAV--KLVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~-v~~D~~--d~~~l~~~~--~~~d 77 (312)
.+|+|+|+ |-+|...+..+...| .+|++++++ ++|.+..+.+ ++.. +..+-. ..+...+.. .++|
T Consensus 30 ~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~-----~~rl~~a~~~---GAd~~in~~~~~~~~~~~~~~~~~~G~d 100 (175)
T d1cdoa2 30 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLN-----PDKFEKAKVF---GATDFVNPNDHSEPISQVLSKMTNGGVD 100 (175)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC-----GGGHHHHHHT---TCCEEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEEec-CCccchHHHHHHHHhhchheeecch-----HHHHHHHHHc---CCcEEEcCCCcchhHHHHHHhhccCCcc
Confidence 57999995 557777777777776 688888888 6677554544 4433 322111 123444433 2799
Q ss_pred EEEEcCCCC
Q 021470 78 VVICAISGV 86 (312)
Q Consensus 78 ~v~~~~~~~ 86 (312)
+++.+.+..
T Consensus 101 ~vid~~G~~ 109 (175)
T d1cdoa2 101 FSLECVGNV 109 (175)
T ss_dssp EEEECSCCH
T ss_pred eeeeecCCH
Confidence 999999864
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.47 E-value=0.031 Score=40.59 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=31.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.++|+|+| +|..|-..+..|.++||+|+++.+.+
T Consensus 43 ~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 43 KKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence 57999999 99999999999999999999998874
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=94.44 E-value=0.19 Score=35.91 Aligned_cols=100 Identities=20% Similarity=0.207 Sum_probs=56.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhhcc------CCC------------eEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSFKE------QGA------------KLVSG 61 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~------------~~v~~ 61 (312)
+||.|-| =|.||+.+++++++++ .+|.++.- ... ++....+-...+ ..+ .+...
T Consensus 2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd--~~~-~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~ 77 (173)
T d1obfo1 2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIND--LGD-PKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVD 77 (173)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEEC--SSC-HHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEE
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcC--CCC-hHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEE
Confidence 6899999 9999999999998754 35555532 222 444433322211 011 11111
Q ss_pred cCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 62 D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
.-.|++.+.=.-.++|+|+-|.|.... ... ++.-.++| +++++.|.
T Consensus 78 ~~~~p~~i~W~~~gvDiViEcTG~f~~----~~~----a~~hl~~G-akkViiSA 123 (173)
T d1obfo1 78 ANRNPAQLPWGALKVDVVLECTGFFTT----KEK----AGAHIKGG-AKKVIISA 123 (173)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCS----HHH----HHHHHHHT-CSEEEESS
T ss_pred ecCCHHHCcccccccceEEEecccccC----HHH----HHHHhccC-CcceEEec
Confidence 223444433222389999999997642 122 22222457 89998764
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.42 E-value=0.023 Score=45.47 Aligned_cols=34 Identities=24% Similarity=0.559 Sum_probs=31.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
+++|+|+| +|.-|...|..|.+.|++|.++-+++
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 47999999 99999999999999999999998764
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.38 E-value=0.035 Score=39.99 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=19.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG 27 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g 27 (312)
+++|+|+| .|.+|+..++.|.+..
T Consensus 7 k~kv~iIG-~G~~g~~h~~~l~~~~ 30 (172)
T d1lc0a1 7 KFGVVVVG-VGRAGSVRLRDLKDPR 30 (172)
T ss_dssp SEEEEEEC-CSHHHHHHHHHHTSHH
T ss_pred CcEEEEEc-CCHHHHHHHHHHHhCC
Confidence 46899999 7999999888887643
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.33 E-value=0.022 Score=41.75 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=31.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 38 (312)
.+||+|+| .|..|-..+..|.+.|+ +|+++.|++.
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 47999999 89999999999999998 5999988743
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.32 E-value=0.079 Score=37.81 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=30.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|+|+|.+.-+|+-++..|.++|..|+.+...
T Consensus 39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~ 72 (170)
T d1a4ia1 39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 72 (170)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEecCCccchHHHHHHHhccCceEEEecc
Confidence 4789999999999999999999999999988665
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=94.29 E-value=0.29 Score=34.56 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=58.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc------CCCe------------EEEccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE------QGAK------------LVSGSFN 64 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~~------------~v~~D~~ 64 (312)
++|.|-| =|.||+.+.+.++++. .+|.++.-. . . ++....+-...+ ..++ +-...-.
T Consensus 2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd~-~-~-~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~ 77 (166)
T d1gado1 2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAINDL-L-D-ADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAER 77 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECS-S-C-HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCC-C-C-HHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCC
Confidence 6899999 9999999999999886 677777532 2 2 443332222211 0111 1111122
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+++.+.=.-.++|+|+-|.|.... ..-++.-.+.| +++++.|.
T Consensus 78 ~p~~i~W~~~gvDiViEcTG~f~t--------~~~~~~hl~~g-akkViiSa 120 (166)
T d1gado1 78 DPANLKWDEVGVDVVAEATGLFLT--------DETARKHITAG-AKKVVMTG 120 (166)
T ss_dssp SGGGGCHHHHTCSEEEECSSSCCS--------HHHHTHHHHTT-CSEEEESS
T ss_pred ChHHCCccccCCCEEEEccccccC--------HHHHHHHhcCC-CceEEeec
Confidence 444433212389999999998752 12222233557 99999864
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.25 E-value=0.032 Score=37.50 Aligned_cols=34 Identities=26% Similarity=0.205 Sum_probs=31.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
++|+|+| +|++|-.++..|.+.|.+|+++.|.+.
T Consensus 23 ~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 23 STVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence 6899999 999999999999999999999988743
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.23 E-value=0.026 Score=45.51 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=31.5
Q ss_pred CC-CcEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCC
Q 021470 1 ME-KSKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPE 37 (312)
Q Consensus 1 M~-~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~ 37 (312)
|. |++|+|+| +|.-|...+..|++.| ++|+++-|++
T Consensus 1 m~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 1 LPTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 44 68999999 8999999999999876 6999998874
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.99 E-value=0.26 Score=35.07 Aligned_cols=79 Identities=19% Similarity=0.178 Sum_probs=43.7
Q ss_pred CcEEEEEcCC-chhhHHHHHHHHhCC----CeEEEEECCCCCCChHHHHHhhhh-----ccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGT-GYLGKRLVKASLALG----HETYVLHRPEIGVDIEKVQMLLSF-----KEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~Gat-G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~l-----~~~~~~~v~~D~~d~~~l~~~ 72 (312)
++||.|+||. .+.+..++..+.... -++..++.+.. ..+.+..+.+ ...+..+-....+|. .++
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~---~~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~a 74 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEG---KEKLEIVGALAKRMVEKAGVPIEIHLTLDR---RRA 74 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGG---HHHHHHHHHHHHHHHHHTTCCCEEEEESCH---HHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCcc---HHHHHHHHHHHHHHHHhcCCCceeeecCCc---hhh
Confidence 3799999952 233445554444432 37777777622 2334333321 122333333333443 456
Q ss_pred hccCCEEEEcCCCCc
Q 021470 73 VKLVDVVICAISGVH 87 (312)
Q Consensus 73 ~~~~d~v~~~~~~~~ 87 (312)
++++|+|+.+++...
T Consensus 75 l~gaDvVv~ta~~~~ 89 (169)
T d1s6ya1 75 LDGADFVTTQFRVGG 89 (169)
T ss_dssp HTTCSEEEECCCTTH
T ss_pred cCCCCEEEEccccCC
Confidence 889999999998654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.84 E-value=0.035 Score=42.69 Aligned_cols=34 Identities=15% Similarity=0.218 Sum_probs=31.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.+||+|+| .|..|..++..|.+.|++|+++-|++
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47999999 89999999999999999999998863
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.81 E-value=0.025 Score=43.99 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=29.7
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
-|+|+| .|..|..++.+|.++|++|+++.+..
T Consensus 6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 399999 89999999999999999999998863
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.80 E-value=0.12 Score=38.80 Aligned_cols=69 Identities=22% Similarity=0.183 Sum_probs=48.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc-cCCEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK-LVDVVIC 81 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-~~d~v~~ 81 (312)
.++|+|-| -|.+|+++++.|.+.|.+|++.+.+ +.+...... ..+.+.+ ++++ .+. .||+++-
T Consensus 39 g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~-----~~~~~~~~~--~~g~~~~-----~~~~---~~~~~cDIl~P 102 (230)
T d1leha1 39 GLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVN-----KAAVSAAVA--EEGADAV-----APNA---IYGVTCDIFAP 102 (230)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC-----HHHHHHHHH--HHCCEEC-----CGGG---TTTCCCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEeeccc-----HHHHHHHHH--hcCCccc-----CCcc---cccccccEecc
Confidence 47899999 9999999999999999999988665 444432222 2233332 2222 233 7999999
Q ss_pred cCCCCc
Q 021470 82 AISGVH 87 (312)
Q Consensus 82 ~~~~~~ 87 (312)
||-...
T Consensus 103 cA~~~~ 108 (230)
T d1leha1 103 CALGAV 108 (230)
T ss_dssp CSCSCC
T ss_pred cccccc
Confidence 987654
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=93.78 E-value=0.056 Score=40.67 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=52.7
Q ss_pred cEEEEEcCCchhhH-HHHHHHHhC-CCeEEEE-ECCCCCCChHHHHHhhhhccCCCeEEE-ccCCCHHHHHHHhc--cCC
Q 021470 4 SKVLIIGGTGYLGK-RLVKASLAL-GHETYVL-HRPEIGVDIEKVQMLLSFKEQGAKLVS-GSFNDYQSLVNAVK--LVD 77 (312)
Q Consensus 4 ~~ilI~GatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~l~~~~~~~v~-~D~~d~~~l~~~~~--~~d 77 (312)
-+|.|+| .|.+|+ +++..+... +.+|+++ +|+ ++++...... -++.... -.+.| +.++++ ++|
T Consensus 34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~-----~~~a~~~~~~--~~i~~~~~~~~~d---~~ell~~~~iD 102 (221)
T d1h6da1 34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGN-----AEKAKIVAAE--YGVDPRKIYDYSN---FDKIAKDPKID 102 (221)
T ss_dssp EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSC-----HHHHHHHHHH--TTCCGGGEECSSS---GGGGGGCTTCC
T ss_pred EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCC-----HHHHHHHHHh--hccccccccccCc---hhhhcccccce
Confidence 3799999 799997 566666554 5788866 454 6665433221 1221000 11233 334454 689
Q ss_pred EEEEcCCCCccc-------------------cchhHhHHHHHHHHHHhC
Q 021470 78 VVICAISGVHIR-------------------SHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 78 ~v~~~~~~~~~~-------------------~~~~~~~~~l~~aa~~~~ 107 (312)
+|+.+.....-. ..+......+++++++.+
T Consensus 103 ~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~ 151 (221)
T d1h6da1 103 AVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN 151 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred eeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcC
Confidence 998777654310 134555666666666666
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.77 E-value=0.16 Score=40.48 Aligned_cols=71 Identities=13% Similarity=0.090 Sum_probs=50.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC-C-CeEEEEECCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL-G-HETYVLHRPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++++|+| +|.+++..++.|+.- . .+|++++|+ +++.+.+ ..++..++.... .. .+++.++|+|+
T Consensus 126 ~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~-----~e~~~~~~~~~~~~~~~~~~---~~----~~a~~~aDiV~ 192 (320)
T d1omoa_ 126 SVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVR-----EKAAKKFVSYCEDRGISASV---QP----AEEASRCDVLV 192 (320)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSS-----HHHHHHHHHHHHHTTCCEEE---CC----HHHHTSSSEEE
T ss_pred cEEEEec-CcccHHHHHHHHHHHhhhhhcccccCC-----HHHHHHHHHHHHhcCCcccc---ch----hhhhccccEEE
Confidence 5788998 999999999998764 3 699999998 6666533 444444554432 12 24467899999
Q ss_pred EcCCCCc
Q 021470 81 CAISGVH 87 (312)
Q Consensus 81 ~~~~~~~ 87 (312)
.+.+...
T Consensus 193 taT~s~~ 199 (320)
T d1omoa_ 193 TTTPSRK 199 (320)
T ss_dssp ECCCCSS
T ss_pred EeccCcc
Confidence 8877544
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.75 E-value=0.51 Score=31.50 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=50.8
Q ss_pred CcEEEEEcCCc----------hhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHH
Q 021470 3 KSKVLIIGGTG----------YLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNA 72 (312)
Q Consensus 3 ~~~ilI~GatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~ 72 (312)
.++|+|+|+.. +.+.+.+++|.+.|++++.+.-++.... .. ..-..-+....-..+.+.+.
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs-------td--~d~aD~lYfePlt~e~v~~I 77 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM-------TD--PEMADATYIEPIHWEVVRKI 77 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG-------GC--GGGSSEEECSCCCHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh-------cC--hhhcceeeeecCCHHHHHHH
Confidence 47999999633 5778999999999999999977743321 00 11123334455577888888
Q ss_pred hc--cCCEEEEcCC
Q 021470 73 VK--LVDVVICAIS 84 (312)
Q Consensus 73 ~~--~~d~v~~~~~ 84 (312)
++ ++|.|+...|
T Consensus 78 i~~E~pd~il~~~G 91 (127)
T d1a9xa3 78 IEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHCCSEEECSSS
T ss_pred HHHhCcCCeEEEee
Confidence 76 7999986655
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.74 E-value=0.027 Score=44.22 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=29.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+|+|+| +|.-|...+..|.++|++|+++-++
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence 5899999 7999999999999999999999776
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=93.54 E-value=0.63 Score=32.84 Aligned_cols=88 Identities=16% Similarity=0.120 Sum_probs=51.3
Q ss_pred cEEEEEcCCchhhHH-HHHHHHhC-C----CeEEEEECCCCCCChHHHHHhh-hh------ccCCCeEEEccCCCHHHHH
Q 021470 4 SKVLIIGGTGYLGKR-LVKASLAL-G----HETYVLHRPEIGVDIEKVQMLL-SF------KEQGAKLVSGSFNDYQSLV 70 (312)
Q Consensus 4 ~~ilI~GatG~iG~~-l~~~L~~~-g----~~V~~~~r~~~~~~~~~~~~~~-~l------~~~~~~~v~~D~~d~~~l~ 70 (312)
.||.|+|| |.+|.. ++..|+.. . .++..++.+ +++++... .+ ......+.... +..
T Consensus 4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 72 (167)
T d1u8xx1 4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDND-----KERQDRIAGACDVFIREKAPDIEFAATT-----DPE 72 (167)
T ss_dssp EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSC-----HHHHHHHHHHHHHHHHHHCTTSEEEEES-----CHH
T ss_pred ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCC-----hhHHHHHHHHHHHHHHHhCCCcceEecC-----Chh
Confidence 58999997 556654 44455542 1 378888887 66653211 11 12233443321 355
Q ss_pred HHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 71 NAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 71 ~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
++++++|+|+.+++... ..+....-....++|
T Consensus 73 eal~~AD~Vvitag~~~-----~~g~~rd~~i~~~~G 104 (167)
T d1u8xx1 73 EAFTDVDFVMAHIRVGK-----YAMRALDEQIPLKYG 104 (167)
T ss_dssp HHHSSCSEEEECCCTTH-----HHHHHHHHHHHHTTT
T ss_pred hccCCCCEEEECCCcCC-----CCceeHHHhhchhcC
Confidence 67889999999999865 334444444455555
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=93.38 E-value=0.1 Score=39.48 Aligned_cols=31 Identities=23% Similarity=0.300 Sum_probs=27.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh-CCCeEEEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA-LGHETYVLH 34 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~ 34 (312)
.++|+|-| .|.+|+++++.|.+ .|.+|++++
T Consensus 31 g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 31 KATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 47899998 99999999999975 599998876
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.36 E-value=0.16 Score=39.58 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=29.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR 35 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 35 (312)
.++|+|-| -|.+|+++++.|.+.|.+|++++-
T Consensus 36 gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 36 DKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence 36899999 899999999999999999998864
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=93.34 E-value=0.098 Score=38.74 Aligned_cols=81 Identities=17% Similarity=0.156 Sum_probs=48.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH------HHhhhhccCCCeEEEccCCCHHHHHHHhc--
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV------QMLLSFKEQGAKLVSGSFNDYQSLVNAVK-- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~l~~~~~~~v~~D~~d~~~l~~~~~-- 74 (312)
.|||+++| ++..+..+.+.|++.|++|.++.-.+... ..+. .........++........+.+.+.+.++
T Consensus 3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1fmta2 3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRP-AGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAEL 80 (206)
T ss_dssp CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC-------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHT
T ss_pred CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcc-cccCccccccchhhhhhccCccccccccccchhhHHHHhhh
Confidence 57999998 78899999999999999987765332111 0000 01112223456666665544455555555
Q ss_pred cCCEEEEcCCC
Q 021470 75 LVDVVICAISG 85 (312)
Q Consensus 75 ~~d~v~~~~~~ 85 (312)
++|.++.+...
T Consensus 81 ~~d~~v~~~~~ 91 (206)
T d1fmta2 81 QADVMVVVAYG 91 (206)
T ss_dssp TCSEEEEESCC
T ss_pred cceEEEeeccc
Confidence 57877766554
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=93.24 E-value=0.23 Score=35.28 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=57.2
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhcc------CCC------------eEEEccCCCH
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKE------QGA------------KLVSGSFNDY 66 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~------------~~v~~D~~d~ 66 (312)
||.|-| =|.||+.+.+++++++.+|.++.-...+ ++....+-...+ ..+ .+-...-.++
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~--~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p 78 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIA--LEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP 78 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSC--HHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcC--HHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh
Confidence 788998 9999999999999999888887542111 444433222211 011 1111122344
Q ss_pred HHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 67 QSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 67 ~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+++.=.-.++|+|+-|.|..... + -++.-.+.| +++++.|.
T Consensus 79 ~~i~W~~~gvD~ViEcTG~f~~~----~----~~~~hl~~g-akkViisa 119 (169)
T d1dssg1 79 ENIPWSKAGAEYIVESTGVFTTI----E----KASAHFKGG-AKKVIISA 119 (169)
T ss_dssp GGCCHHHHTCCEEEECSSSCCSH----H----HHGGGGTTT-CSEEEESS
T ss_pred HHCCccccCCCEEEecCceEcCH----H----HHHHHHhcC-CceEeecC
Confidence 44321123899999999987521 1 111111347 89988763
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.24 E-value=0.58 Score=32.99 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=58.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccC------CC------------eEEEccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQ------GA------------KLVSGSFN 64 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~------~~------------~~v~~D~~ 64 (312)
+||.|-| =|.||+.+.+.++++. .+|.++.-...+ ++....+-...+- .+ .+-...-.
T Consensus 1 tkigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d--~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~ 77 (166)
T d2b4ro1 1 TKLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMD--LNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEK 77 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCC--HHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCS
T ss_pred CeEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCC--hHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCC
Confidence 3788888 9999999999999874 677776432111 4444333222110 11 11111223
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
|++.+.=.-.++|+|+-|.|.... +..++.-.++| +++++.|.
T Consensus 78 ~p~~i~W~~~gvdiViEcTG~f~~--------~~~~~~hl~~g-akkViiSA 120 (166)
T d2b4ro1 78 DPSQIPWGKCQVDVVCESTGVFLT--------KELASSHLKGG-AKKVIMSA 120 (166)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCS--------HHHHTHHHHTT-CSEEEESS
T ss_pred ChHHccccccCCCEEEEecccccc--------hhhhhhhhccC-CCEEEEec
Confidence 454433222289999999998652 22233333567 99999764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.20 E-value=0.039 Score=43.64 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=30.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
|..|+|+| +|.-|..+++.|.+.|++|.++-+++
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 46899999 99999999999999999999997763
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.14 E-value=0.077 Score=39.12 Aligned_cols=84 Identities=17% Similarity=0.161 Sum_probs=50.3
Q ss_pred CcEEEEEcCCchhhHHHH-HHH---HhCC-----CeEEEEECCCCCCChHHH-------------HHhhhhccCCCeEEE
Q 021470 3 KSKVLIIGGTGYLGKRLV-KAS---LALG-----HETYVLHRPEIGVDIEKV-------------QMLLSFKEQGAKLVS 60 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~-~~L---~~~g-----~~V~~~~r~~~~~~~~~~-------------~~~~~l~~~~~~~v~ 60 (312)
..+++|+||||-+.+.-+ -+| ...| ..|++++|+.-+...-+. ..++.+ ...+.++.
T Consensus 20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f-~~~~~Y~~ 98 (203)
T d1qkia1 20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDF-FARNSYVA 98 (203)
T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHH-HTTEECCB
T ss_pred CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHH-HHhhcccc
Confidence 357899999999987533 233 3333 689999998654311111 111111 24678889
Q ss_pred ccCCCHHHHHHHhc---------cCCEEEEcCCCCc
Q 021470 61 GSFNDYQSLVNAVK---------LVDVVICAISGVH 87 (312)
Q Consensus 61 ~D~~d~~~l~~~~~---------~~d~v~~~~~~~~ 87 (312)
+|++|++++.++-+ ....||.++-++.
T Consensus 99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~ 134 (203)
T d1qkia1 99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPT 134 (203)
T ss_dssp CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHH
T ss_pred CcCCChhhHHHHHHHHHHHhcCCCcceEEEEecCHH
Confidence 99999877666422 2346666665543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=93.03 E-value=0.28 Score=37.16 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=29.6
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|+|-| -|.+|+++++.|.+.|.+|++++-.
T Consensus 31 g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 31 GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 47899999 9999999999999999999988643
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.84 E-value=0.18 Score=37.90 Aligned_cols=76 Identities=21% Similarity=0.263 Sum_probs=52.1
Q ss_pred CcEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++||=+| |+|....++++. ... -.|+++.-+ +.-...+... ...++.++.+|..++.........+|.+
T Consensus 75 G~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i 147 (230)
T d1g8sa_ 75 DSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYA-----PRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVI 147 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESC-----HHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCc-----HHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEe
Confidence 36899888 788888888875 333 489999988 5444333322 2457888999998888766544456666
Q ss_pred EEcCCC
Q 021470 80 ICAISG 85 (312)
Q Consensus 80 ~~~~~~ 85 (312)
++....
T Consensus 148 ~~~~~~ 153 (230)
T d1g8sa_ 148 YEDVAQ 153 (230)
T ss_dssp EECCCS
T ss_pred eccccc
Confidence 665543
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.81 E-value=0.058 Score=39.59 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=28.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~ 37 (312)
|||+|+| .|++|-.++..|.+.+ .+|+++.|.+
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6899999 8999999999998875 6888888764
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.72 E-value=0.077 Score=37.28 Aligned_cols=35 Identities=20% Similarity=0.399 Sum_probs=29.4
Q ss_pred cEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 4 SKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 4 ~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
+.++|++ +.|++|..++..|.+.|.+|+++.+...
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4566663 4799999999999999999999999743
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=92.67 E-value=0.39 Score=34.90 Aligned_cols=97 Identities=13% Similarity=0.149 Sum_probs=61.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc-C------------------
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS-F------------------ 63 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D-~------------------ 63 (312)
+||.|+| -|.-|..++..|.+.+ ..|..+.-+++ .+.. ... .....+..+. .
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD---~~~L---~~~-~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~ 72 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTD---LQVL---EAS-NADVKIQIGENITRGLGAGGRPEIGEQAAL 72 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESC---HHHH---HTC-CCSEEEECCTTTTTTSCCTTCHHHHHHHHH
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCC---HHHH---hcC-CcceEEecccccCCCcccccCchhhHhHHH
Confidence 4789999 8999999999999987 33444433321 2111 111 1112222221 1
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCce
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKR 111 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~ 111 (312)
.+.+.+.+.++++|.||.+++.... .-.-...-+++.|++.+ +..
T Consensus 73 e~~~~I~~~l~~~d~vfi~AGlGGg--TGtgaapviA~~ake~g-~lv 117 (194)
T d1w5fa1 73 ESEEKIREVLQDTHMVFITAGFGGG--TGTGASPVIAKIAKEMG-ILT 117 (194)
T ss_dssp HTHHHHHHHTTTCSEEEEEEETTSS--HHHHHHHHHHHHHHHTT-CEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCC--cccchHHHHHHHHHHcC-Cce
Confidence 1357888889999999999987653 22455677899999988 433
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=92.61 E-value=0.06 Score=42.26 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=30.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|||+|+| +|.-|...+..|.+.|++|+++-++
T Consensus 2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 7899999 8999999999999999999999775
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.60 E-value=0.26 Score=32.56 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=28.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEECCCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA---LGHETYVLHRPEIG 39 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~ 39 (312)
.++++|+| +|++|-.++..|.+ +|.+|+++.|.+.-
T Consensus 20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEMI 58 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence 36899999 69999999976654 45689999887443
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.55 E-value=0.2 Score=39.10 Aligned_cols=29 Identities=28% Similarity=0.279 Sum_probs=25.7
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEECCCCC
Q 021470 11 GTGYLGKRLVKASLALGHETYVLHRPEIG 39 (312)
Q Consensus 11 atG~iG~~l~~~L~~~g~~V~~~~r~~~~ 39 (312)
.||..|.+|+++++.+|++|+.+++..+.
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 57999999999999999999999887543
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=92.40 E-value=0.17 Score=37.29 Aligned_cols=73 Identities=14% Similarity=0.084 Sum_probs=50.5
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC------CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG------HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLV 76 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g------~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~ 76 (312)
+++|.|+| -|.+|.+=+..|.++| .+|++--|..+.+ -+|+. ..+.+..... .-++.++.+.+
T Consensus 44 ~KkIaViG-YGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S-~~kA~------~dGf~v~~~~---v~~v~EAv~~A 112 (226)
T d1qmga2 44 IKQIGVIG-WGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNS-FAEAR------AAGFSEENGT---LGDMWETISGS 112 (226)
T ss_dssp CSEEEEEC-CSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSC-HHHHH------HTTCCGGGTC---EEEHHHHHHTC
T ss_pred CCEEEEEE-eccHHHHHHHhChhhcccccCCceEEEEeCCCChh-HHHHH------HcCCccCCCc---ccCHHHHHhhC
Confidence 47899999 9999999999999955 5688777876655 44442 2333321111 12355677889
Q ss_pred CEEEEcCCCC
Q 021470 77 DVVICAISGV 86 (312)
Q Consensus 77 d~v~~~~~~~ 86 (312)
|+|..+++..
T Consensus 113 DiVmiLlPDe 122 (226)
T d1qmga2 113 DLVLLLISDS 122 (226)
T ss_dssp SEEEECSCHH
T ss_pred CEEEEecchH
Confidence 9999998764
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=92.40 E-value=0.79 Score=32.47 Aligned_cols=100 Identities=21% Similarity=0.178 Sum_probs=55.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhccC------CC------------eEEE-c
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKEQ------GA------------KLVS-G 61 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~~------~~------------~~v~-~ 61 (312)
|||.|-| =|.||+.+.+.++++. .+|.++.-. .. .+....+-...+- .+ ..+. .
T Consensus 1 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~--~~-~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~ 76 (172)
T d1rm4a1 1 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDT--GG-VKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVV 76 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECT--TC-HHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCC--CC-HHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEe
Confidence 5899999 9999999999988754 456665332 22 4444322221110 00 0111 1
Q ss_pred cCCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 62 SFNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 62 D~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
.-.|++.+.=.-.|+|+|+-|.|.... .+....- -++| +++++.|.
T Consensus 77 ~~~~p~~i~W~~~gvDiViEcTG~f~~----~~~~~~h----l~~G-akkViiSA 122 (172)
T d1rm4a1 77 SDRNPVNLPWGDMGIDLVIEGTGVFVD----RDGAGKH----LQAG-AKKVLITA 122 (172)
T ss_dssp CCSCGGGSCHHHHTCCEEEECSSSCCB----HHHHHHH----HHTT-CSCEEESS
T ss_pred cCCChHHCChhhcCCCEEEecCceEcc----HHHHHHH----HhcC-CceEEeec
Confidence 122444422111289999999998652 2222222 2347 89998864
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.26 E-value=0.052 Score=42.46 Aligned_cols=32 Identities=31% Similarity=0.397 Sum_probs=30.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.+|+|+| .|..|..++..|.+.|++|.++-|+
T Consensus 3 ~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~ 34 (292)
T d1k0ia1 3 TQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQ 34 (292)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 5799999 7899999999999999999999887
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.06 E-value=0.064 Score=42.67 Aligned_cols=33 Identities=27% Similarity=0.425 Sum_probs=30.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
.++|+|+| +|..|...+..|.++|++|+++-++
T Consensus 30 pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~ 62 (370)
T d2iida1 30 PKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS 62 (370)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 47899999 9999999999999999999999775
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=91.99 E-value=1.5 Score=31.74 Aligned_cols=69 Identities=22% Similarity=0.166 Sum_probs=37.9
Q ss_pred CC-CcEE-EEEcCCchhhHHHH-HHH---HhCC-----CeEEEEECCCCCCChHHHHHhhhhc------------cCCCe
Q 021470 1 ME-KSKV-LIIGGTGYLGKRLV-KAS---LALG-----HETYVLHRPEIGVDIEKVQMLLSFK------------EQGAK 57 (312)
Q Consensus 1 M~-~~~i-lI~GatG~iG~~l~-~~L---~~~g-----~~V~~~~r~~~~~~~~~~~~~~~l~------------~~~~~ 57 (312)
|+ .+++ +|+||||-+.+.-+ -+| ...| ..|++++|+.-+...-+....+.+. ...+.
T Consensus 1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~ 80 (195)
T d1h9aa1 1 VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFS 80 (195)
T ss_dssp CCCCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEE
T ss_pred CCCCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccc
Confidence 44 2444 48899999988543 233 2333 5899999975443111111111111 23567
Q ss_pred EEEccCCCHHHH
Q 021470 58 LVSGSFNDYQSL 69 (312)
Q Consensus 58 ~v~~D~~d~~~l 69 (312)
.+++|+.+++++
T Consensus 81 y~~~~~~~~~~~ 92 (195)
T d1h9aa1 81 YRAHDVTDAASY 92 (195)
T ss_dssp EEECCTTCTTTH
T ss_pred eeeEeeccHhhH
Confidence 788888765433
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.71 E-value=0.54 Score=34.53 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=61.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC------------------
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF------------------ 63 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~------------------ 63 (312)
..+|.|+| -|.-|.+++..|.+.+. .|..+.-+++ .+.. ... .....+..+.-
T Consensus 15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD---~~~L---~~~-~~~~ki~ig~~~t~g~Gag~~p~~g~~aa 86 (209)
T d2vapa1 15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTD---AQQL---IRT-KADKKILIGKKLTRGLGAGGNPKIGEEAA 86 (209)
T ss_dssp CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESB---HHHH---HTS-CCSEEEECCTTTTTTBCCTTCHHHHHHHH
T ss_pred CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCC---HHHH---hcC-CcchhcccccccccccccccchHHHHHHH
Confidence 36899999 89999999999999883 4554443321 2111 111 11112222211
Q ss_pred -CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCc
Q 021470 64 -NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVK 110 (312)
Q Consensus 64 -~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~ 110 (312)
.+.+.+.+.++++|.||.+++..... -.-...-+++.|++.+ +.
T Consensus 87 ~e~~~~I~~~l~~~d~vfi~AGlGGGT--Gsgaapvia~~ake~g-~l 131 (209)
T d2vapa1 87 KESAEEIKAAIQDSDMVFITCGLGGGT--GTGSAPVVAEISKKIG-AL 131 (209)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSH--HHHHHHHHHHHHHHTT-CE
T ss_pred HHHHHHHHHhccCCCEEEEEEeCCCCc--cccHHHHHHHHHHHcC-Cc
Confidence 13468888899999999999887632 2444566888999888 44
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.70 E-value=0.11 Score=39.17 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.2
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.++|+|+| +|..|...+..|.+.|++|+++.++.
T Consensus 49 ~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 49 KDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence 47899999 89999999999999999999998764
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=91.61 E-value=0.75 Score=32.45 Aligned_cols=99 Identities=17% Similarity=0.127 Sum_probs=56.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC---CeEEEEECCCCCCChHHHHHhhhhcc------CCCe------------EEEccC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG---HETYVLHRPEIGVDIEKVQMLLSFKE------QGAK------------LVSGSF 63 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~~------------~v~~D~ 63 (312)
||.|-| =|.||+.+.+.++++. .+|.++.-. .. ++....+-...+ ..++ +-...-
T Consensus 2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~--~~-~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~ 77 (169)
T d1hdgo1 2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDL--TD-TKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAE 77 (169)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECS--SC-HHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECC
T ss_pred EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccC--cc-HHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeC
Confidence 788888 9999999999998743 577776432 22 444433322211 0111 111122
Q ss_pred CCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 64 NDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
.+++.+.=.-.++|+|+-|.|.... . .-++.-.++| +++++.|.
T Consensus 78 ~~p~~i~W~~~gvD~ViEcTG~f~t----~----~~~~~hl~~G-akkViiSA 121 (169)
T d1hdgo1 78 PDPSKLPWKDLGVDFVIESTGVFRN----R----EKAELHLQAG-AKKVIITA 121 (169)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCB----H----HHHTHHHHTT-CSEEEESS
T ss_pred CChhhCCccccCCCEEEEecceecc----c----cchhhhccCC-CceEEEec
Confidence 2444432111289999999998652 1 2222223457 89998864
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=91.54 E-value=1.1 Score=29.24 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=31.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
..+|+|-|-||..|+.-++..++.|.+|.+-+..
T Consensus 6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtP 39 (119)
T d2nu7a1 6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP 39 (119)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEcc
Confidence 3589999999999999999999999999988775
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.53 E-value=0.014 Score=44.36 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=26.9
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCe------EEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHE------TYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~------V~~~~r~ 36 (312)
|+|+|+| .|-+|...+.+|.++|++ +.++.+.
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v~v~e~~~i~~~~ 38 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSVLQPLDVKVYADR 38 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTTSSSCEEEEEESC
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCceEEeeeeecccC
Confidence 5899999 899999999999999965 4555554
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.49 E-value=0.47 Score=31.63 Aligned_cols=86 Identities=19% Similarity=0.175 Sum_probs=54.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhc--cCCEEE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVK--LVDVVI 80 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~--~~d~v~ 80 (312)
..+|+|-|-||..|+.-+++.++.|.+|.+-+.....-. . ..++.++ +++.++.+ ++|+-+
T Consensus 15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~--------~--~~giPVf-------~tV~eA~~~~~~daSv 77 (130)
T d1euca1 15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--------T--HLGLPVF-------NTVKEAKEQTGATASV 77 (130)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--------E--ETTEEEE-------SSHHHHHHHHCCCEEE
T ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCc--------c--ccCccch-------hhHHHHHHhcCCcEEE
Confidence 368999999999999999999999999998877533220 0 1122221 12333333 688766
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.++.. ..-.++||+ ++| ++.+|.
T Consensus 78 IfVPp~~-------a~dAi~EAi-~ag-I~liV~ 102 (130)
T d1euca1 78 IYVPPPF-------AAAAINEAI-DAE-VPLVVC 102 (130)
T ss_dssp ECCCHHH-------HHHHHHHHH-HTT-CSEEEE
T ss_pred EecCHHH-------HHHHHHHHH-hCC-CCEEEE
Confidence 6665432 222344444 567 888765
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=91.49 E-value=0.49 Score=31.12 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=31.1
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.+|+|-|-||..|+.-+++.++.|.+|.+-+...
T Consensus 8 trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPg 41 (121)
T d1oi7a1 8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPG 41 (121)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred CcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecC
Confidence 5899999999999999999999999999987753
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.45 E-value=0.1 Score=37.27 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=29.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCC--eEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGH--ETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~ 37 (312)
.+||+|+| .|+.|-.++..|.+.++ +|+++.+.+
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 47999999 89999999999999884 788887663
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=91.25 E-value=0.054 Score=38.55 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=44.9
Q ss_pred cEEEEEcCCchhhHHHHHH-HHhC-----CCeEEEEECCCCCCChHHHHHhhhh----ccCCCeEEEccCCCHHHHHHHh
Q 021470 4 SKVLIIGGTGYLGKRLVKA-SLAL-----GHETYVLHRPEIGVDIEKVQMLLSF----KEQGAKLVSGSFNDYQSLVNAV 73 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~l----~~~~~~~v~~D~~d~~~l~~~~ 73 (312)
|||.|+|| |.+|...+-. |+.. ..++..++.+ ++|......+ ......+... ++ ..+++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did-----~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l 69 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDID-----EEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAV 69 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSC-----HHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecC-----cHHHHHHHHHHHhhhccCceEEEe--cC---ccccc
Confidence 58999996 6577666533 3321 2589999887 6565432222 2233443332 22 34568
Q ss_pred ccCCEEEEcCCCCc
Q 021470 74 KLVDVVICAISGVH 87 (312)
Q Consensus 74 ~~~d~v~~~~~~~~ 87 (312)
+++|+|+..++...
T Consensus 70 ~~aDvVVita~~~~ 83 (162)
T d1up7a1 70 VDAKYVIFQFRPGG 83 (162)
T ss_dssp TTCSEEEECCCTTH
T ss_pred CCCCEEEEecccCC
Confidence 89999999998764
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.18 E-value=0.056 Score=39.08 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=26.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR 35 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 35 (312)
+.+|+|+| +|++|-.++..|.+.|.++.++.+
T Consensus 3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence 36799999 999999999999999976655544
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.17 E-value=0.22 Score=41.28 Aligned_cols=79 Identities=22% Similarity=0.317 Sum_probs=49.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCC--------------ChHHHHHh----hhh-ccCCCeEEEccC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGV--------------DIEKVQML----LSF-KEQGAKLVSGSF 63 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~~~~~----~~l-~~~~~~~v~~D~ 63 (312)
.||||+| .|.+|..+++.|...|. ++++++.+.-.. ...|++.+ ..+ ..-++..+..++
T Consensus 38 ~kVlvvG-~GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i 116 (426)
T d1yovb1 38 CKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI 116 (426)
T ss_dssp CCEEEEC-SSTTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence 5899999 56799999999999994 788876542110 01233211 122 122455555555
Q ss_pred CCHHHHHHHhccCCEEEEcCCC
Q 021470 64 NDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 64 ~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
.+.. ...++++|+|+.+...
T Consensus 117 ~~~~--~~~~~~~DlVi~~~Dn 136 (426)
T d1yovb1 117 QDFN--DTFYRQFHIIVCGLDS 136 (426)
T ss_dssp GGBC--HHHHTTCSEEEECCSC
T ss_pred cchH--HHHHHhcchheeccCc
Confidence 4422 3567899999988654
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=91.00 E-value=0.097 Score=41.12 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=29.6
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 37 (312)
.+|+|+| .|-+|..++.+|.++|+ +|+++.|+.
T Consensus 2 ~dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 5799999 89999999999999995 799998863
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.97 E-value=0.49 Score=40.31 Aligned_cols=100 Identities=13% Similarity=0.178 Sum_probs=60.4
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCC--------------CChHHHHHh-hhhc--cCC--CeEEEcc
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIG--------------VDIEKVQML-LSFK--EQG--AKLVSGS 62 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~--------------~~~~~~~~~-~~l~--~~~--~~~v~~D 62 (312)
..+|+|+| .|.+|..+++.|...| -++++++.+.-. ....|++.. +.+. .+. ++.+..+
T Consensus 25 ~s~VlvvG-~gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~ 103 (529)
T d1yova1 25 SAHVCLIN-ATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES 103 (529)
T ss_dssp HCEEEECC-CSHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence 36899999 5779999999999999 578777543111 001122211 1222 223 3334333
Q ss_pred CCCHHHH----HHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 63 FNDYQSL----VNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 63 ~~d~~~l----~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.+ ...+.++|+|+.+... ......+-++|++.+ ++-+..
T Consensus 104 ---~~~~~~~~~~~~~~~dvVv~~~~~-------~~~~~~l~~~c~~~~-ip~i~~ 148 (529)
T d1yova1 104 ---PENLLDNDPSFFCRFTVVVATQLP-------ESTSLRLADVLWNSQ-IPLLIC 148 (529)
T ss_dssp ---HHHHHHSCGGGGGGCSEEEEESCC-------HHHHHHHHHHHHHHT-CCEEEE
T ss_pred ---chhhhhhHHHHhcCCCEEEECCCC-------HHHHHHHHHHHHHcC-CCEEEE
Confidence 3332 2346689999977532 556667889999988 665443
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.52 E-value=0.15 Score=36.57 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=28.9
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
.++|+|+| +|++|-.++..|.+.|.+|.++.+..
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence 36899999 99999999999999998877765553
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.45 E-value=0.14 Score=38.62 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=29.0
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
|+|+| +|.-|...+..|.++|++|.++-+++
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 79999 99999999999999999999998863
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=90.42 E-value=0.12 Score=40.04 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=28.6
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|+|+| .|..|..++..|.++|++|+++.+.
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 89999 8999999999999999999999876
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=90.34 E-value=0.83 Score=32.22 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=56.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc------CCC------------eEEEccCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE------QGA------------KLVSGSFN 64 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~------------~~v~~D~~ 64 (312)
-||.|-| =|.||+.+.+.+++++ .+|.++.-...+ ++....+-...+ ..+ .+....-.
T Consensus 2 ikIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~--~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~ 78 (169)
T d1u8fo1 2 VKVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFID--LNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQER 78 (169)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSC--HHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred cEEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCcc--HHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECC
Confidence 4899999 9999999999999876 787777432111 444433222211 011 11111223
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
+++.+.=.-.++|+|+-|.|..... .-++.--+.| +++++.|.
T Consensus 79 ~p~~i~W~~~~vDiViEcTG~f~~~--------~~~~~hl~~g-akkViiSa 121 (169)
T d1u8fo1 79 DPSKIKWGDAGAEYVVESTGVFTTM--------EKAGAHLQGG-AKRVIISA 121 (169)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSH--------HHHGGGGGGT-CSEEEESS
T ss_pred ChhhCCccccCCCEEEEecceeccH--------HHHHHHHhcC-CceEeecc
Confidence 4444321112799999999986521 1111112447 89988864
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.16 E-value=0.23 Score=32.80 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=28.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHh---CCCeEEEEECCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLA---LGHETYVLHRPEI 38 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 38 (312)
.++++|+| .|++|-.++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence 46899999 89999999976544 4789999998754
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.13 E-value=0.49 Score=34.46 Aligned_cols=96 Identities=13% Similarity=0.070 Sum_probs=61.1
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCCCeEEEcc-------------------CC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGS-------------------FN 64 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D-------------------~~ 64 (312)
+|-|+| -|.-|..++..|.+.+. .|..+.-+++ .... ... .....+..+. ..
T Consensus 3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD---~~~L---~~~-~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e 74 (198)
T d1rq2a1 3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTD---AQAL---LMS-DADVKLDVGRDSTRGLGAGADPEVGRKAAED 74 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESC---HHHH---HHC-CCSEEEECCTTTC-----CCCHHHHHHHHHH
T ss_pred eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcch---HHHH---hcC-CcchhhccccccccCCCcCcChhhhHhhHHH
Confidence 467888 78889999999999883 4444443322 1111 111 1122222221 13
Q ss_pred CHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCce
Q 021470 65 DYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKR 111 (312)
Q Consensus 65 d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~ 111 (312)
+.+.+.++++++|.||.+++.... .-.-...-+++.|++.+ +-.
T Consensus 75 ~~~~I~~~l~~~d~vfi~AGlGGg--TGtGaaPviA~iake~g-~l~ 118 (198)
T d1rq2a1 75 AKDEIEELLRGADMVFVTAGEGGG--TGTGGAPVVASIARKLG-ALT 118 (198)
T ss_dssp THHHHHHHHTTCSEEEEEEETTSS--HHHHHHHHHHHHHHHHT-CEE
T ss_pred HHHHHHHHhcCCCEEEEEEecCCC--CCcchHHHHHHHHHHcC-CcE
Confidence 568888899999999999998763 22455677889999988 443
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=90.06 E-value=0.7 Score=33.04 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=44.3
Q ss_pred cEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh----------------ccCCCeEEEccCCCH
Q 021470 4 SKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF----------------KEQGAKLVSGSFNDY 66 (312)
Q Consensus 4 ~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l----------------~~~~~~~v~~D~~d~ 66 (312)
.+||.+| |+|. .+..|+++|++|++++.+ +.-....+.. ......++.+|+.+.
T Consensus 22 ~rvLd~GCG~G~----~a~~la~~G~~V~gvD~S-----~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 92 (201)
T d1pjza_ 22 ARVLVPLCGKSQ----DMSWLSGQGYHVVGAELS-----EAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 92 (201)
T ss_dssp CEEEETTTCCSH----HHHHHHHHCCEEEEEEEC-----HHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred CEEEEecCcCCH----HHHHHHHcCCceEeeccc-----HHHHHHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence 6899999 5554 344566679999999988 3333222221 123457888888764
Q ss_pred HHHHHHhccCCEEEEcCCCCc
Q 021470 67 QSLVNAVKLVDVVICAISGVH 87 (312)
Q Consensus 67 ~~l~~~~~~~d~v~~~~~~~~ 87 (312)
.... ....|.|+.......
T Consensus 93 ~~~~--~~~~D~i~~~~~l~~ 111 (201)
T d1pjza_ 93 TARD--IGHCAAFYDRAAMIA 111 (201)
T ss_dssp THHH--HHSEEEEEEESCGGG
T ss_pred cccc--ccceeEEEEEeeeEe
Confidence 3322 235788876555443
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=90.05 E-value=1.5 Score=30.96 Aligned_cols=99 Identities=21% Similarity=0.209 Sum_probs=56.0
Q ss_pred EEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCCCCCChHHHHHhhhhcc------CCC------------eEEEccCCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALG-HETYVLHRPEIGVDIEKVQMLLSFKE------QGA------------KLVSGSFND 65 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~l~~------~~~------------~~v~~D~~d 65 (312)
+|.|-| =|.||+.+.++++++. .+|.++.-. . . ++....+-...+ ..+ .+....-.|
T Consensus 3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~-~-d-~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~ 78 (171)
T d3cmco1 3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDL-T-D-ANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD 78 (171)
T ss_dssp EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECS-S-C-HHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS
T ss_pred EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCC-C-C-HHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCC
Confidence 788888 9999999999999875 677777532 2 2 444432222211 011 111122234
Q ss_pred HHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhCCCceeecCC
Q 021470 66 YQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSE 116 (312)
Q Consensus 66 ~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~ 116 (312)
++++.=.-.++|+|+-|.|.... .+. +..-.+.| +++++.|.
T Consensus 79 p~~i~W~~~~vDiViEcTG~f~t----~~~----~~~hl~~g-akkViiSa 120 (171)
T d3cmco1 79 PENLAWGEIGVDIVVESTGRFTK----RED----AAKHLEAG-AKKVIISA 120 (171)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCB----HHH----HTHHHHTT-CSEEEESS
T ss_pred HHHccccccCCcEEEEecCccCC----HHH----HHHHHhCC-CceEEEec
Confidence 44433222279999999998652 111 11112457 89988763
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.86 E-value=0.16 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=29.7
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
..||+|+| +|.-|-..+..|.+.|++|+++-++
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 36799999 9999999999999999999999554
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.85 E-value=0.21 Score=38.27 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~ 37 (312)
++|+|+| .|..|..++..|.+.| ++|.++-|++
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 6899999 8999999999999999 5999998874
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.64 E-value=0.26 Score=36.42 Aligned_cols=76 Identities=17% Similarity=0.190 Sum_probs=54.3
Q ss_pred cEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++||=+| |+|..-.++++.. ..| +|+++.-+ +.....+... ...++.++.+|..++......+..+|+|+
T Consensus 58 ~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis-----~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~ 130 (209)
T d1nt2a_ 58 ERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYS-----AKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY 130 (209)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCC-----HHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCC-----HHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEE
Confidence 6899888 7788777777644 555 89999887 5544433222 24589999999999887776677788888
Q ss_pred EcCCCC
Q 021470 81 CAISGV 86 (312)
Q Consensus 81 ~~~~~~ 86 (312)
+.....
T Consensus 131 ~~~~~~ 136 (209)
T d1nt2a_ 131 QDIAQK 136 (209)
T ss_dssp ECCCST
T ss_pred ecccCh
Confidence 865443
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.62 E-value=0.18 Score=35.49 Aligned_cols=31 Identities=32% Similarity=0.360 Sum_probs=26.9
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
||+|+| .|++|-.++..|. ++.+|+++.|.+
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence 899999 8999999999885 478999998763
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=89.31 E-value=0.16 Score=38.69 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=29.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 37 (312)
++|+|+| +|.-|...+..|.++|+ +|+++-+++
T Consensus 1 P~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVG-AGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 4799999 89999999999999995 799997763
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.04 E-value=1.6 Score=31.63 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=58.7
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCC-eEEEEECCCCCCChHHHHHhhhhccCC--CeEEEcc-------------------
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGH-ETYVLHRPEIGVDIEKVQMLLSFKEQG--AKLVSGS------------------- 62 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~l~~~~--~~~v~~D------------------- 62 (312)
.|.|+| -|.-|..++..|.+.+. .|..+.-+++. +.|.... ..+..++
T Consensus 3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~---------~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa 72 (198)
T d1ofua1 3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDA---------QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAA 72 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBT---------GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHH
T ss_pred eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcH---------HHHhcCCccceeccccccccCCCCCCChHHHHHHH
Confidence 578899 89999999999999873 34444333221 1121111 1111111
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
..+.+.+.+.++++|.||.+++..... -.-...-+++.|++.+
T Consensus 73 ~e~~~~I~~~l~~~d~vfi~AGlGGGT--GtgaapviA~~ake~g 115 (198)
T d1ofua1 73 LEDRERISEVLEGADMVFITTGMGGGT--GTGAAPIIAEVAKEMG 115 (198)
T ss_dssp HHTHHHHHHHHTTCSEEEEEEETTSSH--HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCCCc--cccHHHHHHHHHHHcC
Confidence 125577888899999999999987632 2445666899999888
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.85 E-value=0.24 Score=33.76 Aligned_cols=34 Identities=38% Similarity=0.479 Sum_probs=28.3
Q ss_pred cEEEEEcCCchhhHHHHHHHH----hCCCeEEEEECCCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASL----ALGHETYVLHRPEI 38 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~----~~g~~V~~~~r~~~ 38 (312)
++++|+| .|++|-.++..|. +.|.+|+.+.+.+.
T Consensus 38 k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 38 KSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 5899999 7999999998885 35789999988643
|
| >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: NTRC receiver domain species: Salmonella typhimurium [TaxId: 90371]
Probab=88.46 E-value=2.2 Score=27.95 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccC
Q 021470 1 MEKSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSF 63 (312)
Q Consensus 1 M~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~ 63 (312)
|++.+|||+-=.-.+...+.+.|.+.|++|...... .+ .++.+......++..|+
T Consensus 1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~-----~~---a~~~l~~~~~dlii~D~ 55 (123)
T d1krwa_ 1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENG-----NE---VLAALASKTPDVLLSDI 55 (123)
T ss_dssp CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS-----HH---HHHHHTTCCCSEEEECC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH-----HH---HHHHHHhCCCCEEEehh
Confidence 777789999988899888888888899999875443 21 12333344555555554
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=88.44 E-value=0.37 Score=30.05 Aligned_cols=32 Identities=22% Similarity=0.138 Sum_probs=26.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
|||||+| +|-=--+|+..|.++.++|++.--+
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence 6999999 6655778899999889999987544
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.28 E-value=0.36 Score=33.61 Aligned_cols=34 Identities=18% Similarity=0.429 Sum_probs=29.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCC-CeEEEEECCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALG-HETYVLHRPE 37 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~ 37 (312)
.++|+|+| .|++|--.+..+++.| ..|+++.|.+
T Consensus 45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 36899999 8999999999999998 5688888763
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.27 E-value=0.24 Score=36.91 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=29.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhC--CCeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLAL--GHETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~ 37 (312)
++|+|+| +|.-|...+..|.+. |++|+++.+.+
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~ 36 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQL 36 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6999999 999999999999775 68999998764
|
| >d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Biotin carboxylase (BC), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.96 E-value=0.88 Score=29.66 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=26.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR 35 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 35 (312)
++||||.- -|-|..++++.+.+.|.+.+++..
T Consensus 2 ~~kvLIAN-RGeiA~Ri~ra~~elgi~tvavys 33 (114)
T d2j9ga2 2 LDKIVIAN-RGEIALRILRACKELGIKTVAVHS 33 (114)
T ss_dssp CSEEEECC-CHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CceeeEec-CCHHHHHHHHHHHHhCCceEEEec
Confidence 48999998 999999999999999976555533
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=87.91 E-value=2.5 Score=29.28 Aligned_cols=106 Identities=20% Similarity=0.114 Sum_probs=59.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeE-EEccC---CCHHHHHHHhc----
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKL-VSGSF---NDYQSLVNAVK---- 74 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~-v~~D~---~d~~~l~~~~~---- 74 (312)
.++|+|++.+|..|.-++..+.+.|.++--++ ++..+.++.+-...... -..|+ .+++.+.++++
T Consensus 3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~-------~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~ 75 (163)
T d2csua3 3 GNKVAIMTNAGGPGVLTADELDKRGLKLATLE-------EKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ 75 (163)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHTTTCEECCCC-------HHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCeEEEEECChHHHHHHHHHHHHcCCccCCCC-------HHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence 36899999999999999999999997775542 23333333332222211 01222 24555555554
Q ss_pred --cCCEEEEcCCCCc-cccchhHhHHHHHHHHHHhCCCceeecC
Q 021470 75 --LVDVVICAISGVH-IRSHQILLQLKLVDAIKEAGNVKRFLPS 115 (312)
Q Consensus 75 --~~d~v~~~~~~~~-~~~~~~~~~~~l~~aa~~~~~v~~~v~S 115 (312)
++|.|+....... ...........+++++++.+.-+-++.+
T Consensus 76 d~~vd~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpv~~~ 119 (163)
T d2csua3 76 DPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAM 119 (163)
T ss_dssp STTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEE
T ss_pred CCCcCEEEEeeccCCcccccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 6787754333221 1222345567788888877622334443
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.65 E-value=0.29 Score=38.40 Aligned_cols=33 Identities=24% Similarity=0.418 Sum_probs=30.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
..|+|+| .|..|..++..|.+.|.+|+++.+.+
T Consensus 8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 3699999 89999999999999999999998864
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.64 E-value=0.78 Score=34.17 Aligned_cols=78 Identities=13% Similarity=0.179 Sum_probs=56.2
Q ss_pred CcEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh--ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 3 KSKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF--KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 3 ~~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l--~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
.++||=+| |+|..-.++++.. ..+-+|+++..+ +.....+... ...++..+..|..+++.+......+|+|
T Consensus 74 G~~VLDlGaGsG~~t~~la~~V-G~~G~V~aVD~s-----~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i 147 (227)
T d1g8aa_ 74 GKSVLYLGIASGTTASHVSDIV-GWEGKIFGIEFS-----PRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHH-CTTSEEEEEESC-----HHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCEEEEeccCCCHHHHHHHHHh-CCCCEEEEEeCc-----HHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEE
Confidence 36889788 7888888888744 444689999988 5555433332 2356888999999988877666678999
Q ss_pred EEcCCCC
Q 021470 80 ICAISGV 86 (312)
Q Consensus 80 ~~~~~~~ 86 (312)
++.....
T Consensus 148 ~~d~~~~ 154 (227)
T d1g8aa_ 148 FEDVAQP 154 (227)
T ss_dssp EECCCST
T ss_pred EEEcccc
Confidence 8866543
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.54 E-value=3.8 Score=29.78 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=57.1
Q ss_pred cEEEEEcCCch---hhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGY---LGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~---iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|+|+-|.|. =|..++++|.+.|++|.++....... ++-....+.+...+...+. ..++. .+...|+|+
T Consensus 41 ~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~dlII 113 (211)
T d2ax3a2 41 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKT-PDCEYNYGLYKKFGGKVVE--QFEPS----ILNEFDVVV 113 (211)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCC-HHHHHHHHHHHHTTCCEES--CCCGG----GGGGCSEEE
T ss_pred CcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCC-cHHHHHHHHHHHcCCcccc--ccccc----cccCceEEE
Confidence 46777666665 56689999999999999887654433 3322233333334444332 11222 255789999
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+.-.......--.....+++.+.+.+
T Consensus 114 Dal~G~Gl~~~l~~~~~~~i~~iN~~~ 140 (211)
T d2ax3a2 114 DAIFGTGLRGEITGEYAEIINLVNKSG 140 (211)
T ss_dssp EESCCTTCCSCCCHHHHHHHHHHHHSC
T ss_pred EecccCCccccchHHHHHHHHHHHhhc
Confidence 877444332222334667888887766
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=87.04 E-value=0.27 Score=36.25 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=24.3
Q ss_pred cEEEEEcCCc-hhhH-----HHHHHHHhCCCeEEEEE
Q 021470 4 SKVLIIGGTG-YLGK-----RLVKASLALGHETYVLH 34 (312)
Q Consensus 4 ~~ilI~GatG-~iG~-----~l~~~L~~~g~~V~~~~ 34 (312)
|+++|+| || .+|+ .|+.+|.++|++|..+.
T Consensus 2 ~~~~i~g-t~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTG-TDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 6899999 65 7776 66777888999999884
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.89 E-value=0.35 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=29.8
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIG 39 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 39 (312)
.++|+|+| +|.-|.-++..|....-+|+...|++..
T Consensus 32 gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~~ 67 (107)
T d2gv8a2 32 GESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGGG 67 (107)
T ss_dssp TCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence 47899999 8999999999999888777777776443
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.76 E-value=0.35 Score=38.32 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=28.6
Q ss_pred EEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 6 VLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 6 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
|+|+| +|.-|...+..|.++|++|+++-+++
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 78999 89999999999999999999997753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.72 E-value=0.31 Score=37.16 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=29.0
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR 35 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 35 (312)
.++|+|-| -|.+|+++++.|.+.|.+|++++-
T Consensus 36 g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 36 GKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp TCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 47899999 899999999999999999998854
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=86.69 E-value=0.32 Score=39.13 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=28.6
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
-|+|+| +|+-|..++..|.+.|++|.++-+.
T Consensus 4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 378999 9999999999999999999999874
|
| >d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein YNL200c (YNU0 YEAST) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.72 E-value=1.7 Score=32.66 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=58.4
Q ss_pred cEEEEEcC---CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGG---TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~Ga---tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++|+|+=| +|.=|..++++|.+.|++|.++.-...............+...+..++..+-.+..... ...+.|+||
T Consensus 56 ~~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~iV 134 (243)
T d1jzta_ 56 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEYL-KPEKTLCIV 134 (243)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEECSSTTCGGGGG-STTTEEEEE
T ss_pred CeEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHHCCCceecccccchhhcc-ccccccEEE
Confidence 35666544 44567799999999999998886554433233333444455556666554433322111 234678888
Q ss_pred EcCCCCccccchhHhHHHHHHHHHHhC
Q 021470 81 CAISGVHIRSHQILLQLKLVDAIKEAG 107 (312)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~aa~~~~ 107 (312)
.+.-.......--.....+++.+.+.+
T Consensus 135 Dal~G~Gl~~~l~~~~~~li~~iN~~~ 161 (243)
T d1jzta_ 135 DAIFGFSFKPPMREPFKGIVEELCKVQ 161 (243)
T ss_dssp EESCCTTCCSSCCTTHHHHHHHHHHHT
T ss_pred EeeecccccCcccHHHHHHHHHHHHhC
Confidence 766444332222234566777776554
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=85.67 E-value=2.1 Score=30.48 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=48.8
Q ss_pred CchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh--ccCCEEEEcCCCCc
Q 021470 12 TGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV--KLVDVVICAISGVH 87 (312)
Q Consensus 12 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~--~~~d~v~~~~~~~~ 87 (312)
|=.-|.| .+.+++++-+|++++|+ ++-....+.+...++.++.+++.+-+.+...+ .++|.|+.-.|..+
T Consensus 26 T~G~GGh-s~~iL~~~~~viaiD~D-----~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs 97 (182)
T d1wg8a2 26 TLGGAGH-ARGILERGGRVIGLDQD-----PEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS 97 (182)
T ss_dssp TCTTSHH-HHHHHHTTCEEEEEESC-----HHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred CCCCcHH-HHHHhcccCcEEEEhhh-----hhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence 3333445 34566667799999999 65544445555678999999998876665543 36899988777765
|
| >d1vb5a_ c.124.1.5 (A:) Putative eIF-2B subunit 2-like protein PH0440 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NagB/RpiA/CoA transferase-like superfamily: NagB/RpiA/CoA transferase-like family: IF2B-like domain: Putative eIF-2B subunit 2-like protein PH0440 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=85.52 E-value=3.7 Score=31.28 Aligned_cols=103 Identities=6% Similarity=0.002 Sum_probs=65.3
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC--CeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG--HETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVIC 81 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~ 81 (312)
.+||..|-+|-+ ..+++.+.++| ++|++.-.++. .+-......|...|+.+... -..++...++.+|.|+.
T Consensus 110 ~~ILT~~~S~tv-~~~l~~a~~~gk~~~V~v~EsrP~---~eG~~la~~L~~~GI~vtlI---~Dsa~~~~m~~~d~Viv 182 (274)
T d1vb5a_ 110 DVIITHSFSSTV-LEIIRTAKERKKRFKVILTESSPD---YEGLHLARELEFSGIEFEVI---TDAQMGLFCREASIAIV 182 (274)
T ss_dssp EEEECCSCCHHH-HHHHHHHHHTTCCEEEEEECCTTT---THHHHHHHHHHHTTCCEEEE---CGGGHHHHHTTCSEEEE
T ss_pred CEEEEeCchHHH-HHHHHHHHHcCCCeEEEEeCCCcc---cchHHHHHHHHHcCCceEEe---cchHHHHHhhcCCEEEE
Confidence 467777766544 44555666777 46666533221 22233446677778755443 22456677888999887
Q ss_pred cCCCCcc--ccchhHhHHHHHHHHHHhCCCceeec
Q 021470 82 AISGVHI--RSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 82 ~~~~~~~--~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
-+..... .-.|-.++..++-+|+.++ ++.+|.
T Consensus 183 GAd~v~~nG~v~nkiGT~~~A~~Ak~~~-vP~~V~ 216 (274)
T d1vb5a_ 183 GADMITKDGYVVNKAGTYLLALACHENA-IPFYVA 216 (274)
T ss_dssp CCSEECTTSCEEEETTHHHHHHHHHHTT-CCEEEE
T ss_pred eeeEEecCCCEEeccchhHHHHHHHHcC-CCceEe
Confidence 5543322 2367889999999999999 888776
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=85.45 E-value=0.25 Score=40.59 Aligned_cols=33 Identities=36% Similarity=0.514 Sum_probs=25.5
Q ss_pred cEEEEEcC------Cchhh---HHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIGG------TGYLG---KRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~Ga------tG~iG---~~l~~~L~~~g~~V~~~~r~ 36 (312)
||||+++. +|.+| ..|+++|.+.||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 68888764 35554 66789999999999999744
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=85.03 E-value=0.5 Score=37.34 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=24.4
Q ss_pred cEEEEEc-CC-chh--hHHHHHHHHhCCCeEEEEECC
Q 021470 4 SKVLIIG-GT-GYL--GKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 4 ~~ilI~G-at-G~i--G~~l~~~L~~~g~~V~~~~r~ 36 (312)
|||+|++ || |.+ +.+|+++|.++||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 5788776 34 444 446889999999999988754
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=83.96 E-value=3.2 Score=29.60 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=43.3
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhh-cc---CCCeEEEccCCCHHHHHHHhccCCE
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSF-KE---QGAKLVSGSFNDYQSLVNAVKLVDV 78 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l-~~---~~~~~v~~D~~d~~~l~~~~~~~d~ 78 (312)
..+||=+| +| .|+ .+..|.++|++|++++-+ +.-.+..+.. .. .++++..+|+.+..- -...|.
T Consensus 31 ~grvLDiG-cG-~G~-~~~~la~~g~~v~gvD~s-----~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~ 98 (198)
T d2i6ga1 31 PGRTLDLG-CG-NGR-NSLYLAANGYDVTAWDKN-----PASMANLERIKAAEGLDNLQTDLVDLNTLTF----DGEYDF 98 (198)
T ss_dssp SCEEEEET-CT-TSH-HHHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCTTEEEEECCTTTCCC----CCCEEE
T ss_pred CCcEEEEC-CC-CCH-HHHHHHHHhhhhccccCc-----HHHHHHHHHHhhhccccchhhhheecccccc----cccccE
Confidence 35889888 34 444 334667889999999887 4333222211 12 346777777654321 135799
Q ss_pred EEEcCCCCc
Q 021470 79 VICAISGVH 87 (312)
Q Consensus 79 v~~~~~~~~ 87 (312)
|+.......
T Consensus 99 I~~~~~~~~ 107 (198)
T d2i6ga1 99 ILSTVVMMF 107 (198)
T ss_dssp EEEESCGGG
T ss_pred EEEeeeeec
Confidence 987665544
|
| >d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Pseudomonas putida [TaxId: 303]
Probab=83.91 E-value=5.5 Score=32.04 Aligned_cols=107 Identities=17% Similarity=0.114 Sum_probs=67.9
Q ss_pred EEEEcCCchhhHHHH-HHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCC
Q 021470 6 VLIIGGTGYLGKRLV-KASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAIS 84 (312)
Q Consensus 6 ilI~GatG~iG~~l~-~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~ 84 (312)
.+++. +|.-....+ ..|++.|.+|.+...- .. ....-....+...++++...|..|.+.++++++.-..++++=.
T Consensus 77 a~~~~-SGmaAi~~~l~~l~~~Gd~vl~~~~~-Yg--~t~~l~~~~~~~~Gi~~~~~d~~d~~~~~~ai~~~t~lv~~Es 152 (392)
T d1gc0a_ 77 GLALA-SGMGAITSTLWTLLRPGDEVLLGNTL-YG--CTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFES 152 (392)
T ss_dssp EEEES-SHHHHHHHHHHHHCCTTCEEEEESSC-CS--HHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEES
T ss_pred eeehh-hHHHHHHHHHHhhccCCCeeeccccc-ch--hhhhhhhhhhccCCcccccCCccCHHHHHHhCCCCCeEEEecc
Confidence 44554 777665443 4667788888775332 21 2222222445677999999999999999999884333443322
Q ss_pred CCccccchhHhHHHHHHHHHHhCCCceeecCCCC
Q 021470 85 GVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFG 118 (312)
Q Consensus 85 ~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g 118 (312)
+.+ +...+.....+.+.|+++| +..+|=++|.
T Consensus 153 p~N-P~l~v~Di~~i~~ia~~~g-~~~vvDnT~a 184 (392)
T d1gc0a_ 153 PAN-PNMHMADIAGVAKIARKHG-ATVVVDNTYC 184 (392)
T ss_dssp SCT-TTCCCCCHHHHHHHHGGGT-CEEEEECTTT
T ss_pred ccc-ceeeecchHHHHHHHHhcC-CEEEEecCcc
Confidence 222 2234778899999999998 7666534443
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=83.53 E-value=0.5 Score=37.81 Aligned_cols=31 Identities=19% Similarity=0.388 Sum_probs=28.5
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
-|+|+| +|.-|..++..|.+.|++|.++-+.
T Consensus 6 DviIVG-sG~aG~v~A~~La~~G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVG-SGPIGCTYARELVGAGYKVAMFDIG 36 (379)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence 489999 9999999999999999999999664
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=83.05 E-value=0.61 Score=34.97 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=30.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
--|+|+| .|..|...+..|.+.|++|.++.++..
T Consensus 3 yDViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 3 YDVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3589999 899999999999999999999988743
|
| >d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Biotin carboxylase (BC), N-terminal domain species: Aquifex aeolicus [TaxId: 63363]
Probab=82.45 E-value=1.1 Score=29.12 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=27.1
Q ss_pred CcEEEEEcCCchhhHHHHHHHHhCCCeEEEEEC
Q 021470 3 KSKVLIIGGTGYLGKRLVKASLALGHETYVLHR 35 (312)
Q Consensus 3 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 35 (312)
.+||||.- -|-|.-++++.+.+.|.+.+++.-
T Consensus 2 ~kkvLIAN-RGEiA~Ri~ra~~elgi~tvav~s 33 (114)
T d1ulza2 2 VNKVLVAN-RGEIAVRIIRACKELGIPTVAIYN 33 (114)
T ss_dssp CSSEEECC-CHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CceeeEec-CCHHHHHHHHHHHHhcCCeEEEec
Confidence 47999998 999999999999999976666543
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=82.40 E-value=7.4 Score=28.62 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=40.2
Q ss_pred CcEEEEEcCC---chhhHHHHHHHHhC--CCeEEEEE-CCCCCCChHHHHHh-hhhccCCCeEEEccCCCHHHHHHHhcc
Q 021470 3 KSKVLIIGGT---GYLGKRLVKASLAL--GHETYVLH-RPEIGVDIEKVQML-LSFKEQGAKLVSGSFNDYQSLVNAVKL 75 (312)
Q Consensus 3 ~~~ilI~Gat---G~iG~~l~~~L~~~--g~~V~~~~-r~~~~~~~~~~~~~-~~l~~~~~~~v~~D~~d~~~l~~~~~~ 75 (312)
+.+|.|+|.. |+++..-+..+.+. +.+|++++ ++ +++.+.. +.+....... +.|.+++.+- ..
T Consensus 16 ~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~-----~~~~~~~~~~~~~~~~~~----~~~~~~l~~~-~~ 85 (237)
T d2nvwa1 16 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPT-----LKSSLQTIEQLQLKHATG----FDSLESFAQY-KD 85 (237)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSC-----HHHHHHHHHHTTCTTCEE----ESCHHHHHHC-TT
T ss_pred CeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCC-----HHHHHHHHHhccccccee----ecchhhcccc-cc
Confidence 3589999953 35666555666553 47888764 44 5554322 2222222222 2454443321 36
Q ss_pred CCEEEEcCCC
Q 021470 76 VDVVICAISG 85 (312)
Q Consensus 76 ~d~v~~~~~~ 85 (312)
+|+|+.+.+.
T Consensus 86 iD~V~i~tp~ 95 (237)
T d2nvwa1 86 IDMIVVSVKV 95 (237)
T ss_dssp CSEEEECSCH
T ss_pred cceeeccCCC
Confidence 8999888754
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=82.31 E-value=0.57 Score=37.61 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=28.2
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRP 36 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 36 (312)
-++|+| +|+-|..++..|.+.|++|.++-+.
T Consensus 9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 378999 9999999999999999999999764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=82.20 E-value=0.57 Score=35.40 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=31.8
Q ss_pred CCC-cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCC
Q 021470 1 MEK-SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEI 38 (312)
Q Consensus 1 M~~-~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 38 (312)
|++ ..|+|+| .|--|...+..|.+.|++|.++.+.+.
T Consensus 1 M~~~~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 1 MSQYSENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp CEEECSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCcEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 553 3499999 899999999999999999999988743
|
| >d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: PLP-dependent transferases family: Cystathionine synthase-like domain: Methionine gamma-lyase, MGL species: Citrobacter freundii [TaxId: 546]
Probab=81.53 E-value=6.4 Score=31.71 Aligned_cols=107 Identities=9% Similarity=0.045 Sum_probs=68.5
Q ss_pred EEEcCCchhhHH-HHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHhccCCEEEEcCCC
Q 021470 7 LIIGGTGYLGKR-LVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAVKLVDVVICAISG 85 (312)
Q Consensus 7 lI~GatG~iG~~-l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~~~~~~ 85 (312)
+++. +|.-... ++..|++.|.+|.+...- .. ....-....+..-++++...|..|++.++++++.-..++++=.+
T Consensus 82 ~~~s-SGmaAi~~~l~~ll~~Gd~vi~~~~~-Yg--~t~~~~~~~l~~~Gi~~~~vd~~d~~~~~~~i~~~Tklv~~Esp 157 (397)
T d1y4ia1 82 LATA-SGISAITTTLLTLCQQGDHIVSASAI-YG--CTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETP 157 (397)
T ss_dssp EEES-SHHHHHHHHHHHHCCTTCEEEEESSS-CH--HHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESS
T ss_pred eeeh-HHHHHHHHHHhhccCCCCeeeeeccc-cc--ccchhhhcccCCCceEeeccCCCCHHHHHHhcCCCCcEEEecCC
Confidence 4444 7776653 445777889888876432 11 22222223455779999999999999999999753334433333
Q ss_pred CccccchhHhHHHHHHHHHHhCCCceeecCCCCC
Q 021470 86 VHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGT 119 (312)
Q Consensus 86 ~~~~~~~~~~~~~l~~aa~~~~~v~~~v~S~~g~ 119 (312)
.+ +...+.....+.+.|+++| +..+|=++++.
T Consensus 158 ~N-P~l~v~Di~~i~~iA~~~g-i~~vvDnT~at 189 (397)
T d1y4ia1 158 AN-PTLSLVDIETVAGIAHQQG-ALLVVDNTFMS 189 (397)
T ss_dssp CT-TTCCCCCHHHHHHHHHHTT-CEEEEECTTTC
T ss_pred cc-cceeecccHHHHHHhhcCC-ceEEecCcccC
Confidence 22 2344777889999999999 76666455443
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.32 E-value=1.2 Score=32.96 Aligned_cols=74 Identities=15% Similarity=0.030 Sum_probs=43.5
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh---------------------hccCCCeEEEcc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS---------------------FKEQGAKLVSGS 62 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---------------------l~~~~~~~v~~D 62 (312)
.+||..| .|. | ..+..|.+.|++|++++-+ +.-.+.... ....+++++.+|
T Consensus 47 ~rvLd~G-CG~-G-~~a~~LA~~G~~V~gvD~S-----~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 118 (229)
T d2bzga1 47 LRVFFPL-CGK-A-VEMKWFADRGHSVVGVEIS-----ELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCS 118 (229)
T ss_dssp CEEEETT-CTT-C-THHHHHHHTTCEEEEECSC-----HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred CEEEEeC-CCC-c-HHHHHHHhCCCcEEEEeCC-----HHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcc
Confidence 5899999 333 3 3345567789999999887 332221111 112357788888
Q ss_pred CCCHHHHHHHhccCCEEEEcCCCCc
Q 021470 63 FNDYQSLVNAVKLVDVVICAISGVH 87 (312)
Q Consensus 63 ~~d~~~l~~~~~~~d~v~~~~~~~~ 87 (312)
+.+... ......|+|+.......
T Consensus 119 ~~~l~~--~~~~~fd~i~~~~~l~~ 141 (229)
T d2bzga1 119 IFDLPR--TNIGKFDMIWDRGALVA 141 (229)
T ss_dssp GGGGGG--SCCCCEEEEEESSSTTT
T ss_pred hhhccc--cccCceeEEEEEEEEEe
Confidence 755332 11124688887666554
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=80.76 E-value=3.8 Score=33.11 Aligned_cols=90 Identities=11% Similarity=0.012 Sum_probs=57.0
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhhhccCCCeEEEccCCCHHHHHHHh-ccCCEEEEc
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLSFKEQGAKLVSGSFNDYQSLVNAV-KLVDVVICA 82 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~l~~~~~~~v~~D~~d~~~l~~~~-~~~d~v~~~ 82 (312)
..|++.| +|..|+.+++.|.++|.+|+++.-+.... ....-.|+.++ +++.+.+.. .+.++|+..
T Consensus 39 ~~~~l~g-~~~~~~~~~~~~~~~~~~v~~~~d~~~~~--------~~~~~~g~pv~-----s~~~~~~~~~~~~~~~~v~ 104 (395)
T d2py6a1 39 TRLVILG-TKGFGAHLMNVRHERPCEVIAAVDDFRYH--------SGELYYGLPII-----STDRFTELATHDRDLVALN 104 (395)
T ss_dssp CEEEEEC-SSSTHHHHHSCSSSCSSEEEEEECTTTTT--------SCCEETTEEEE-----CHHHHHHHHHTCTTEEEEE
T ss_pred ceEEEEc-CchhHHHHHHHHHHCCceEEEEecCchhh--------cCceecceEee-----cHHHhhhhhhccCcEEEEE
Confidence 3688999 78889999999999999999987653211 00012344444 555555544 366766655
Q ss_pred CCCCccccchhHhHHHHHHHHHHhCCCceeec
Q 021470 83 ISGVHIRSHQILLQLKLVDAIKEAGNVKRFLP 114 (312)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~aa~~~~~v~~~v~ 114 (312)
.+.. ......+.+.+++.| ++.+-+
T Consensus 105 ~~~~------~~~~~~~~~~~~~~~-~~~~~~ 129 (395)
T d2py6a1 105 TCRY------DGPKRFFDQICRTHG-IPHLNF 129 (395)
T ss_dssp CCCS------HHHHHHHHHHHHHTT-CCEEEH
T ss_pred eccc------cchhhHHHHHHHhcC-Ccccch
Confidence 5432 334455566778888 776543
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.60 E-value=0.64 Score=34.49 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=29.4
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCC-------CeEEEEECCC
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALG-------HETYVLHRPE 37 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~ 37 (312)
.+|+|+| +|.-|...+..|.+.| ++|+++.+.+
T Consensus 3 ~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 42 (239)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred cEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence 5899999 9999999999999988 4799998874
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=80.33 E-value=0.78 Score=35.67 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=29.2
Q ss_pred EEEEEcCCchhhHHHHHHHHhCCCeEEEEECCC
Q 021470 5 KVLIIGGTGYLGKRLVKASLALGHETYVLHRPE 37 (312)
Q Consensus 5 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 37 (312)
-|+|+| +|..|...+..|.++|.+|.++.+.+
T Consensus 18 DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVG-SGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 389999 99999999999999999999998763
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=80.30 E-value=2.6 Score=31.29 Aligned_cols=70 Identities=17% Similarity=0.112 Sum_probs=42.7
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh---hccCCCeEEEccCCCHHHHHHHhccCCEEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS---FKEQGAKLVSGSFNDYQSLVNAVKLVDVVI 80 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---l~~~~~~~v~~D~~d~~~l~~~~~~~d~v~ 80 (312)
++||=+| +|. |.. +..|.+.|.+|+++.-+ ++-....+. ....+++++.+|+.+.. .-+..|.|+
T Consensus 43 ~~iLDiG-cGt-G~~-~~~l~~~~~~v~gvD~s-----~~mi~~a~~~~~~~~~~i~~~~~d~~~l~----~~~~fD~I~ 110 (251)
T d1wzna1 43 RRVLDLA-CGT-GIP-TLELAERGYEVVGLDLH-----EEMLRVARRKAKERNLKIEFLQGDVLEIA----FKNEFDAVT 110 (251)
T ss_dssp CEEEEET-CTT-CHH-HHHHHHTTCEEEEEESC-----HHHHHHHHHHHHHTTCCCEEEESCGGGCC----CCSCEEEEE
T ss_pred CEEEEeC-CCC-Ccc-chhhcccceEEEEEeec-----cccccccccccccccccchheehhhhhcc----cccccchHh
Confidence 5799888 332 333 44577789999999887 322222111 12346899999986632 112579888
Q ss_pred EcCCC
Q 021470 81 CAISG 85 (312)
Q Consensus 81 ~~~~~ 85 (312)
+..+.
T Consensus 111 ~~~~~ 115 (251)
T d1wzna1 111 MFFST 115 (251)
T ss_dssp ECSSG
T ss_pred hhhhh
Confidence 76443
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=80.23 E-value=3.6 Score=33.16 Aligned_cols=82 Identities=13% Similarity=0.102 Sum_probs=53.8
Q ss_pred cEEEEEcCCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHH-HHhhhhccCCCeEEEccCCCH---HHHHHHhccCCEE
Q 021470 4 SKVLIIGGTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKV-QMLLSFKEQGAKLVSGSFNDY---QSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~l~~~~~~~v~~D~~d~---~~l~~~~~~~d~v 79 (312)
-+|+=++ +..-|-...+.|.+.|.+|+=+-+..... ..+. .......+.+-+.+..|+.++ +.+.++++.+|+|
T Consensus 12 irVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd-~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~~~Lv~~aDv~ 89 (402)
T d1xk7a1 12 LRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWAD-TIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIF 89 (402)
T ss_dssp CEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCC-GGGGSSSHHHHHTTTCEEEEECTTSHHHHHHHHHHHTTCSEE
T ss_pred CEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCC-ccccCCchhHHhCCCCeEEEEeCcCHHHHHHHHHHHhhcCCc
Confidence 3566555 55557777888888999999987654221 1111 001112256778899999887 5566677799999
Q ss_pred EEcCCCCc
Q 021470 80 ICAISGVH 87 (312)
Q Consensus 80 ~~~~~~~~ 87 (312)
+++..+..
T Consensus 90 i~n~rpg~ 97 (402)
T d1xk7a1 90 IEASKGPA 97 (402)
T ss_dssp EEECSSSH
T ss_pred eeeecccc
Confidence 98876543
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=80.23 E-value=1.2 Score=33.34 Aligned_cols=88 Identities=15% Similarity=0.192 Sum_probs=51.5
Q ss_pred cEEEEEc-CCchhhHHHHHHHHhCCCeEEEEECCCCCCChHHHHHhhh-h--ccCCCeEEEccCCCHHHHHHHhccCCEE
Q 021470 4 SKVLIIG-GTGYLGKRLVKASLALGHETYVLHRPEIGVDIEKVQMLLS-F--KEQGAKLVSGSFNDYQSLVNAVKLVDVV 79 (312)
Q Consensus 4 ~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-l--~~~~~~~v~~D~~d~~~l~~~~~~~d~v 79 (312)
++||=+| |+|. ++..|.+.|.+|++++.+ ++-.+..+. . ...+++++.+|+.+.+ .-+.+|+|
T Consensus 39 ~~vLDiGCG~G~----~~~~l~~~g~~v~GvD~S-----~~ml~~A~~~~~~~~~~v~~~~~d~~~~~----~~~~fD~i 105 (246)
T d1y8ca_ 39 DDYLDLACGTGN----LTENLCPKFKNTWAVDLS-----QEMLSEAENKFRSQGLKPRLACQDISNLN----INRKFDLI 105 (246)
T ss_dssp TEEEEETCTTST----THHHHGGGSSEEEEECSC-----HHHHHHHHHHHHHTTCCCEEECCCGGGCC----CSCCEEEE
T ss_pred CeEEEEeCcCCH----HHHHHHHhCCccEeeccc-----hhhhhhccccccccCccceeeccchhhhc----cccccccc
Confidence 5799888 4554 445667789999999887 432222111 1 2347899999986643 12358999
Q ss_pred EEcCCCCccccchhHhHHHHHHHHHH
Q 021470 80 ICAISGVHIRSHQILLQLKLVDAIKE 105 (312)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~aa~~ 105 (312)
+++.+....- .+......+++.+.+
T Consensus 106 ~~~~~~~~~~-~~~~~~~~~l~~~~~ 130 (246)
T d1y8ca_ 106 TCCLDSTNYI-IDSDDLKKYFKAVSN 130 (246)
T ss_dssp EECTTGGGGC-CSHHHHHHHHHHHHT
T ss_pred ceeeeeeecc-CCHHHHHHHHHHHHH
Confidence 8764432210 113344455555554
|