Citrus Sinensis ID: 021493

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MQSLKNSPSPLKRPRLTPQPPPTPPNPQTLTTNKPSKWTPLNLTQSELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQNGDVCYHIHTSPSEPAAKSALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLASLGSHLGNVEGFEFHEFPSLERLSLVSEVELRNAGFGYRAKYITGTVDVLQSKHSGGAEWLLSLRKLDLQEAIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWKIATRYLLPELAGVRLTPKLCSRVAEAFCE
ccccccccccccccccccccccccccccccccccccccCCccccccccccccccccccccccEECcccEEEEEEccEEEEEEECccccEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccccHHHHccccHHHHHHccccccHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHcccccccHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHcc
************************************KWTPLNLTQSELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQNGDVCYHIHTSPSEPAAKSALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLASLGSHLGNVEGFEFHEFPSLERLSLVSEVELRNAGFGYRAKYITGTVDVLQSKHSGGAEWLLSLRKLDLQEAIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWKIATRYLLPELAGVRLTPKLCSRVAEAFCE
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MQSLKNSPSPLKRPRLTPQPPPTPPNPQTLTTNKPSKWTPLNLTQSELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQNGDVCYHIHTSPSEPAAKSALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLASLGSHLGNVEGFEFHEFPSLERLSLVSEVELRNAGFGYRAKYITGTVDVLQSKHSGGAEWLLSLRKLDLQEAIDALCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWKIATRYLLPELAGVRLTPKLCSRVAEAFCE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
N-glycosylase/DNA lyase OGG1 Involved in repair of DNA damaged by oxidation by incising DNA at 8-oxoG residues. Excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine (Fapy) from damaged DNA. Has a beta-lyase activity that nicks DNA 3' to the lesion.probableQ9FNY7

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XHI, chain A
Confidence level:very confident
Coverage over the Query: 35-307
View the alignment between query and template
View the model in PyMOL