Citrus Sinensis ID: 021580

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Protein Sequence
MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFLAAL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccHHHHHHcccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEcccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcEEEHccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccEEEccccccccccccEEEEcccccccccccHHHHHHHHEcccccccccccccccccHHHHHHHHHHc
Coil and Loop (DISEMBL)
MATRYYSFVVALHLTLMNILFGMVvgaaapasrgpieanDKDLIQVALNLEfletefflngalgrgldsiepemaaggppptgaskanldhTTYRIIEEFGYQEIGHLSRAIVTTvggfarpqidlsrQNFANIFDQAvgykltppfdpysntVNYLLASYVIPYVglvgyvgtipnlvnctsRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLgkrgnkdeglrvprrlgaenrtdsnilsananslsysrtppEILRIVYgtgsenkpggffpnggngAVAKRFLAAL
Flexible Loop (DISEMBL)
MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALrnrlgkrgnkdeglrvprrlgaenrtdsnilsananslsysrtpPEILRIVYGTGSENkpggffpnggnGAVAKRFLAAL
Low Complexity Region (SEG)
MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNlefletefflNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDsnilsananslsysRTPPEILRIVYGTGSENKpggffpnggngAVAKRFLAAL
Disordered region (IsUnstruct)
***RYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGL*********************LDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALR*********************************************ILRIVYGT**************************
Disordered Region (DISOPRED)
********VVALHLTLMNILFGMVVGAAA********ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFLAAL
Disordered Region (DISEMBL)
MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFLAAL
Disordered Region (DISPRO)
*ATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFLAAL
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFLAAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	310	2.2.26 [Sep-21-2011]
P22242	313	Desiccation-related prote	N/A	no	0.945	0.936	0.493	6e-75

>sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1

 Score =  281 bits (718), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 145/294 (49%), Positives = 181/294 (61%), Gaps = 1/294 (0%)

Query: 7   SFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRG 66
           +F  A  ++    L      AA    +  I  +D  L++  LNLE LE EFF   A G+G
Sbjct: 6   TFASAALVSFFLALICSCSYAAWHHEKDDIPKSDVSLLEFPLNLELLEAEFFAWAAFGKG 65

Query: 67  LDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDL 126
           +D +EPE+A GGP P G  KANL      II +F YQE GH+ RAI ++V GF RP +DL
Sbjct: 66  IDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHV-RAIQSSVEGFPRPLLDL 124

Query: 127 SRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSL 186
           S ++FA + D A G  L PPFDPY+N +NYLLA YV+PYVGL GYVG  P L +  SR L
Sbjct: 125 SAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGANPKLESPVSRKL 184

Query: 187 VAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRV 246
           VAGLL VE+GQDA+IR LLYERA   V PY +TVAEFT++IS LRN+LG +G KD GL V
Sbjct: 185 VAGLLAVEAGQDAIIRALLYERATDKVEPYGITVAEFTNKISELRNKLGDKGVKDLGLIV 244

Query: 247 PRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNG 300
              LGAE +   N+L+ + NSL++ RTP   L           P  F P    G
Sbjct: 245 EPELGAEGKISGNVLAGDKNSLAFPRTPERCLGSCTAAAMRPSPAAFIPKAPTG 298

Craterostigma plantagineum (taxid: 4153)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
224061357	304	predicted protein [Populus trichocarpa]	0.970	0.990	0.677	1e-111
255582162	303	conserved hypothetical protein [Ricinus	0.954	0.976	0.661	1e-106
255582160	305	conserved hypothetical protein [Ricinus	0.974	0.990	0.635	1e-106
225437298	305	PREDICTED: desiccation-related protein P	0.974	0.990	0.649	3e-95
225429860	315	PREDICTED: desiccation-related protein P	0.912	0.898	0.598	8e-93
147797908	844	hypothetical protein VITISV_023045 [Viti	0.912	0.335	0.598	9e-93
297821182	315	hypothetical protein ARALYDRAFT_907848 [	0.964	0.949	0.611	2e-92
296081802	292	unnamed protein product [Vitis vinifera]	0.912	0.969	0.598	2e-92
15228845	317	uncharacterized protein [Arabidopsis tha	0.964	0.943	0.607	5e-92
125543840	346	hypothetical protein OsI_11540 [Oryza sa	0.909	0.815	0.600	3e-91

>gi|224061357|ref|XP_002300440.1| predicted protein [Populus trichocarpa] gi|222847698|gb|EEE85245.1| predicted protein [Populus trichocarpa]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/307 (67%), Positives = 239/307 (77%), Gaps = 6/307 (1%)

Query: 1   MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLN 60
           MAT Y+         ++ I+  + +     A  GP+EA DKDL+Q  LNLEFLE EFFLN
Sbjct: 1   MATLYF-----FSTLVLTIVVSVPINVLGSAYCGPVEAIDKDLVQFPLNLEFLEAEFFLN 55

Query: 61  GALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFA 120
           GALG GLD+ EP  AAGGPPP GA KANLD  T RIIEEFGYQE+GHL RAI+TTVGG  
Sbjct: 56  GALGLGLDAFEPGFAAGGPPPIGAQKANLDPVTRRIIEEFGYQEVGHL-RAIITTVGGVP 114

Query: 121 RPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVN 180
           RP  DLS + FA +FD+AVGYKL PPF+PYSNTVNYLLASY IPYVGLVGYVGTIP+L N
Sbjct: 115 RPLYDLSPEAFAQLFDKAVGYKLDPPFNPYSNTVNYLLASYAIPYVGLVGYVGTIPHLAN 174

Query: 181 CTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNK 240
            TSR LVA LLGVESGQDAVIRTLLYE+AD+ V+PY +TVAEFT+ IS +RN L   G +
Sbjct: 175 YTSRRLVASLLGVESGQDAVIRTLLYEKADEKVLPYDITVAEFTNAISGIRNELAMCGIR 234

Query: 241 DEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNG 300
           DEGL VP  LGAENRT+SNILSA+ NSLSY+RTP +ILRI+YGTGSE  PGGF P GG+G
Sbjct: 235 DEGLIVPLNLGAENRTESNILSADTNSLSYARTPQQILRIIYGTGSEYMPGGFLPRGGSG 294

Query: 301 AVAKRFL 307
            +A+ FL
Sbjct: 295 KIARSFL 301

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582162|ref|XP_002531875.1| conserved hypothetical protein [Ricinus communis] gi|223528483|gb|EEF30512.1| conserved hypothetical protein [Ricinus communis]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/304 (66%), Positives = 231/304 (75%), Gaps = 8/304 (2%)

Query: 5   YYSFVVALHLTLMNILFGMVVGAAAPASR-GPIEANDKDLIQVALNLEFLETEFFLNGAL 63
           ++SF +     L + +      AAA A R GPI+A D+D +Q ALNLEFLE EFF  G+L
Sbjct: 6   FFSFSLVYPFVLASTI------AAASAQRCGPIKATDQDRLQFALNLEFLEAEFFCYGSL 59

Query: 64  GRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQ 123
           GRGL SI+P +A GGPPP GA KANLD  T +IIEEF YQE+GHL RAI TTVGG   P 
Sbjct: 60  GRGLHSIDPALADGGPPPIGAQKANLDPVTRQIIEEFCYQEVGHL-RAIKTTVGGLRMPL 118

Query: 124 IDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTS 183
            D  R +FA  FD AVG KL PPF+PY NTVNYL+ASYVIPYVGLVGYVGTIP L N T+
Sbjct: 119 YDFRRTSFAKTFDVAVGRKLDPPFNPYMNTVNYLIASYVIPYVGLVGYVGTIPELANYTT 178

Query: 184 RSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEG 243
           ++L A LLGVE+GQDAVIR LLYE+AD+ V PY +TVAEFT RIS  RN LG  G KDEG
Sbjct: 179 KALAASLLGVEAGQDAVIRALLYEKADEKVKPYNITVAEFTSRISNFRNELGMCGIKDEG 238

Query: 244 LRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVA 303
           + VPR LGAE RT SN+LSA+ANSLSY+RTPPEILRI+YGTG E+KPGGF P GGNG +A
Sbjct: 239 IIVPRELGAEKRTQSNVLSADANSLSYARTPPEILRILYGTGDESKPGGFLPQGGNGRIA 298

Query: 304 KRFL 307
           K FL
Sbjct: 299 KSFL 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582160|ref|XP_002531874.1| conserved hypothetical protein [Ricinus communis] gi|223528482|gb|EEF30511.1| conserved hypothetical protein [Ricinus communis]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/307 (63%), Positives = 237/307 (77%), Gaps = 5/307 (1%)

Query: 1   MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLN 60
           M  RY+ +   ++L ++      +VG+A   S GPIEA+DKD +Q ALNLE+ E EFF  
Sbjct: 1   MDERYFCYFGLVYLVVLAST--TLVGSAY--SCGPIEADDKDRLQFALNLEYSEAEFFCY 56

Query: 61  GALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFA 120
           G+ G GLDSIEP +A GGPPP GA KANLD  T +I+EEF YQE+GH+ RAI+TTVGGF 
Sbjct: 57  GSRGHGLDSIEPALANGGPPPIGAQKANLDPVTCQIVEEFCYQEVGHI-RAIITTVGGFP 115

Query: 121 RPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVN 180
           RP  DLS +NFA + D+A+  KL PPF+PY NT+NY+LASYV+PYVGLVGYVGTIP L N
Sbjct: 116 RPLYDLSAENFARVIDEALDCKLDPPFNPYLNTINYVLASYVLPYVGLVGYVGTIPELAN 175

Query: 181 CTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNK 240
            T++ L A LLGVE+GQDAVIRTLLYE++ + V PY MTVAEFT +IS LRN L   G K
Sbjct: 176 YTTKRLAASLLGVEAGQDAVIRTLLYEKSHEKVEPYNMTVAEFTSKISWLRNELAMCGIK 235

Query: 241 DEGLRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNG 300
           DEG+ VP+ LGAE RT+SN+LSA+ NSLSY+RTPPEILRIVYGTG E++PGGF P GGNG
Sbjct: 236 DEGIIVPKELGAEKRTESNVLSADKNSLSYARTPPEILRIVYGTGKESEPGGFLPEGGNG 295

Query: 301 AVAKRFL 307
            +AK FL
Sbjct: 296 RIAKSFL 302

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437298|ref|XP_002267051.1| PREDICTED: desiccation-related protein PCC13-62 [Vitis vinifera] gi|297743854|emb|CBI36824.3| unnamed protein product [Vitis vinifera]

 Score =  354 bits (908), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 200/308 (64%), Positives = 231/308 (75%), Gaps = 6/308 (1%)

Query: 1   MATRYYSFVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLN 60
           MAT   SF   L   L + L    + ++AP   GP+ A+D D IQ ALNLEFLE EFFL+
Sbjct: 1   MATISQSFFFILPFLLYSRL---DIASSAPGC-GPLVADDVDRIQFALNLEFLEAEFFLH 56

Query: 61  GALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFA 120
           GALG GLD + P++A GGPPP GA KANLD    RIIEEFGYQE+GHL RAI + V G  
Sbjct: 57  GALGEGLDQVAPQLARGGPPPIGARKANLDDFERRIIEEFGYQEVGHL-RAITSAVEGLP 115

Query: 121 RPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVN 180
           RP +DLS QNF  IF QA+G  L PP DPYSNTVNYLLASYVIPYVGLVGYVGTIP+L N
Sbjct: 116 RPPLDLSPQNFKKIFKQAIGQDLKPPMDPYSNTVNYLLASYVIPYVGLVGYVGTIPSLTN 175

Query: 181 CTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNK 240
            +S SLVA LLGVESGQDAVIR LLY+R  + V PY +TVAEFT  IS LRN+LG  G K
Sbjct: 176 SSSLSLVASLLGVESGQDAVIRALLYKRESEFVQPYNITVAEFTRGISNLRNQLGMSGVK 235

Query: 241 DEG-LRVPRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGN 299
           DEG + V  + GAEN+TDSNILSA+ANSLSY+R P EILRIVYGTG+E++PGGF P GG 
Sbjct: 236 DEGVIVVDPQSGAENKTDSNILSADANSLSYARQPQEILRIVYGTGNESQPGGFLPKGGI 295

Query: 300 GAVAKRFL 307
           G +A+ +L
Sbjct: 296 GNIAQAYL 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429860|ref|XP_002283317.1| PREDICTED: desiccation-related protein PCC13-62-like isoform 1 [Vitis vinifera]

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 170/284 (59%), Positives = 211/284 (74%), Gaps = 1/284 (0%)

Query: 24  VVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTG 83
           V   A PA    ++  D +L+Q A NLE LE ++FL GALG GLD + P++  GGPPP G
Sbjct: 30  VCQPAYPAHAIAVDEGDVNLLQFAENLEHLEADYFLWGALGYGLDEVAPQLVMGGPPPIG 89

Query: 84  ASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKL 143
           A KA LD+ T  II EF Y+E+ HL R +  TVGGF RP +DLS  NFA + D A GY L
Sbjct: 90  AKKAKLDNLTLNIITEFAYEEVAHL-RILKRTVGGFPRPLMDLSAGNFAKLIDSAFGYAL 148

Query: 144 TPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRT 203
            PPFDPY ++++Y+++ YV+PY+GLV YVGT P L+   S+ L+AGLLGVESGQDAVIRT
Sbjct: 149 VPPFDPYHDSLSYMISCYVLPYMGLVAYVGTNPLLIGYYSKRLLAGLLGVESGQDAVIRT 208

Query: 204 LLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSA 263
            LYERA + V PYK TVAEFT RIS LRNRLGK G KDEG+ VP+ LGAENRT +N+LS+
Sbjct: 209 YLYERAKEQVHPYKHTVAEFTARISELRNRLGKCGIKDEGIIVPKELGAENRTTTNVLSS 268

Query: 264 NANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFL 307
           +A+S+SY RTP E+LRIVY TG E+ PGGF+P GGNG +A+ FL
Sbjct: 269 DADSISYMRTPAEVLRIVYSTGDEHIPGGFYPKGGNGKIARGFL 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]

 Score =  346 bits (887), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 170/284 (59%), Positives = 210/284 (73%), Gaps = 1/284 (0%)

Query: 24  VVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTG 83
           V   A PA    ++  D +L+Q A NLE LE ++FL GALG GLD + P++  GGPPP G
Sbjct: 559 VCQPAYPAHAIAVDEGDVNLLQFAENLEHLEADYFLWGALGYGLDEVAPQLVMGGPPPIG 618

Query: 84  ASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKL 143
           A KA LD+ T  II EF Y+E+ HL R +  TVGGF RP +DLS  NFA + D A GY L
Sbjct: 619 AKKAKLDNLTLNIITEFAYEEVAHL-RXLKRTVGGFPRPLMDLSAGNFAKLIDSAFGYAL 677

Query: 144 TPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRT 203
            PPFDPY ++++Y+++ YV+PY+GLV YVGT P L+   S+ L+AGLLGVESGQDAVIRT
Sbjct: 678 VPPFDPYHDSLSYMISCYVLPYMGLVAYVGTNPLLIGYYSKRLLAGLLGVESGQDAVIRT 737

Query: 204 LLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSA 263
            LYERA + V PYK TVAEFT RIS LRNRLGK G KDEG+ VP+ LGAENRT +N+LS+
Sbjct: 738 YLYERAKEQVHPYKHTVAEFTARISELRNRLGKCGIKDEGIIVPKELGAENRTTTNVLSS 797

Query: 264 NANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFL 307
           +A+S+SY RTP E LRIVY TG E+ PGGF+P GGNG +A+ FL
Sbjct: 798 DADSISYMRTPAEXLRIVYSTGDEHIPGGFYPKGGNGKIARGFL 841

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821182|ref|XP_002878474.1| hypothetical protein ARALYDRAFT_907848 [Arabidopsis lyrata subsp. lyrata] gi|297324312|gb|EFH54733.1| hypothetical protein ARALYDRAFT_907848 [Arabidopsis lyrata subsp. lyrata]

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/301 (61%), Positives = 215/301 (71%), Gaps = 2/301 (0%)

Query: 8   FVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGL 67
           F + L L L+  +    V + + +  G I A+D D +  ALNLEF E EFFL GA G+GL
Sbjct: 2   FKLCLVLILLIAIDASPVQSGSLSCSGNISASDVDRVHFALNLEFTEAEFFLKGATGKGL 61

Query: 68  DSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLS 127
           D+    +A GGPPP GA KANLD  T RIIEEFGYQEIGHL RAI    GG  RP I+L+
Sbjct: 62  DAFNATLAKGGPPPVGAKKANLDPITKRIIEEFGYQEIGHL-RAITDMTGGIPRPLINLT 120

Query: 128 RQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLV 187
           R+NFA   D+AVG +  P FDPY+N++NYLLASY IPYVGL GYVG IP LV    + LV
Sbjct: 121 RENFAVFMDRAVGRRSNPRFDPYANSLNYLLASYYIPYVGLTGYVGAIPYLVYFNIKRLV 180

Query: 188 AGLLGVESGQDAVIRTLLYERADQIVVPY-KMTVAEFTDRISALRNRLGKRGNKDEGLRV 246
           AGLLGVESGQDAVIRTLLYER ++ V  Y  +TVAE T+ IS LRN LG  G KDEGL V
Sbjct: 181 AGLLGVESGQDAVIRTLLYERQNETVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCV 240

Query: 247 PRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRF 306
           P  LGAENRT SNILSAN  SLSY RT  EILR++YGTG E++PGGF+P G NG +A+ F
Sbjct: 241 PLWLGAENRTTSNILSANPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARMF 300

Query: 307 L 307
           L
Sbjct: 301 L 301

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081802|emb|CBI20807.3| unnamed protein product [Vitis vinifera]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/284 (59%), Positives = 211/284 (74%), Gaps = 1/284 (0%)

Query: 24  VVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTG 83
           V   A PA    ++  D +L+Q A NLE LE ++FL GALG GLD + P++  GGPPP G
Sbjct: 7   VCQPAYPAHAIAVDEGDVNLLQFAENLEHLEADYFLWGALGYGLDEVAPQLVMGGPPPIG 66

Query: 84  ASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKL 143
           A KA LD+ T  II EF Y+E+ HL R +  TVGGF RP +DLS  NFA + D A GY L
Sbjct: 67  AKKAKLDNLTLNIITEFAYEEVAHL-RILKRTVGGFPRPLMDLSAGNFAKLIDSAFGYAL 125

Query: 144 TPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRT 203
            PPFDPY ++++Y+++ YV+PY+GLV YVGT P L+   S+ L+AGLLGVESGQDAVIRT
Sbjct: 126 VPPFDPYHDSLSYMISCYVLPYMGLVAYVGTNPLLIGYYSKRLLAGLLGVESGQDAVIRT 185

Query: 204 LLYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSA 263
            LYERA + V PYK TVAEFT RIS LRNRLGK G KDEG+ VP+ LGAENRT +N+LS+
Sbjct: 186 YLYERAKEQVHPYKHTVAEFTARISELRNRLGKCGIKDEGIIVPKELGAENRTTTNVLSS 245

Query: 264 NANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFL 307
           +A+S+SY RTP E+LRIVY TG E+ PGGF+P GGNG +A+ FL
Sbjct: 246 DADSISYMRTPAEVLRIVYSTGDEHIPGGFYPKGGNGKIARGFL 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228845|ref|NP_191832.1| uncharacterized protein [Arabidopsis thaliana] gi|15294284|gb|AAK95319.1|AF410333_1 AT3g62730/F26K9_160 [Arabidopsis thaliana] gi|7362753|emb|CAB83123.1| putative protein [Arabidopsis thaliana] gi|20147275|gb|AAM10351.1| AT3g62730/F26K9_160 [Arabidopsis thaliana] gi|332646864|gb|AEE80385.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 183/301 (60%), Positives = 215/301 (71%), Gaps = 2/301 (0%)

Query: 8   FVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGL 67
           F + L L L+  +      + + +  G I A+D D +  A+NLEF E EFFL GA G+GL
Sbjct: 2   FKLCLVLVLVIAVDANPAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGL 61

Query: 68  DSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLS 127
           D+    +A GGPPP GA KANLD  T RIIEEFGYQEIGHL RAI    GG  RP I+L+
Sbjct: 62  DAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHL-RAITDMTGGIPRPLINLT 120

Query: 128 RQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLV 187
           R+NFA   D+AVG K  P FDPY+N++NYLLASY IPYVGL GYVGTIP LV    + LV
Sbjct: 121 RENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLV 180

Query: 188 AGLLGVESGQDAVIRTLLYERADQIVVPY-KMTVAEFTDRISALRNRLGKRGNKDEGLRV 246
           AGLLGVESGQDAVIRTLLYER ++ V  Y  +TVAE T+ IS LRN LG  G KDEGL V
Sbjct: 181 AGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCV 240

Query: 247 PRRLGAENRTDSNILSANANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRF 306
           P  LGAENRT SNILSA+  SLSY RT  EILR++YGTG E++PGGF+P G NG +A+ F
Sbjct: 241 PLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARMF 300

Query: 307 L 307
           L
Sbjct: 301 L 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125543840|gb|EAY89979.1| hypothetical protein OsI_11540 [Oryza sativa Indica Group]

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/283 (60%), Positives = 207/283 (73%), Gaps = 1/283 (0%)

Query: 25  VGAAAPASRGPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGA 84
             AAAP +   + A+D D ++ ALNLEF E EFFL+ A G GLD + P +  GGPPP GA
Sbjct: 55  CSAAAPHTPVAVFAHDVDPVRFALNLEFAEAEFFLHAAFGVGLDHLAPNLTLGGPPPVGA 114

Query: 85  SKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLT 144
            KA LD  T+R+  EF YQEIGHL RAI  TVGG  RP IDLS  NFA + D+AVGY L 
Sbjct: 115 RKAGLDELTWRVCAEFAYQEIGHL-RAIQRTVGGIPRPLIDLSAHNFARVMDEAVGYHLD 173

Query: 145 PPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTL 204
           PPFDPY+N++N+LLA YVIPY+G+ GY GT P +    ++ LVAGLL VESGQDAV+R L
Sbjct: 174 PPFDPYANSLNFLLAVYVIPYLGINGYTGTNPLIDGYATKRLVAGLLAVESGQDAVVRGL 233

Query: 205 LYERADQIVVPYKMTVAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDSNILSAN 264
           L+E   + V PY  TVAE TDR+SALRN+LG+ G KDEGL VP +LGAE +  +NILSAN
Sbjct: 234 LFEHRRETVSPYGATVAELTDRVSALRNKLGQCGVKDEGLIVPEQLGAEGKICTNILSAN 293

Query: 265 ANSLSYSRTPPEILRIVYGTGSENKPGGFFPNGGNGAVAKRFL 307
            +SLSYSRTP E+LRI+Y TG E+ PGGF+P G NG +A+ FL
Sbjct: 294 VDSLSYSRTPAELLRILYLTGDEHVPGGFYPEGANGRIARMFL 336

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	310
TAIR|locus:2081645	317	AT3G62730 "AT3G62730" [Arabido	0.964	0.943	0.521	1.1e-69
TAIR|locus:2202593	315	AT1G47980 "AT1G47980" [Arabido	0.870	0.857	0.527	1.9e-67

TAIR|locus:2081645 AT3G62730 "AT3G62730" [Arabidopsis thaliana (taxid:3702)]

 Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
 Identities = 157/301 (52%), Positives = 187/301 (62%)

Query:     8 FVVALHLTLMNILFGMVVGAAAPASRGPIEANDKDLIQVALNXXXXXXXXXXNGALGRGL 67
             F + L L L+  +      + + +  G I A+D D +  A+N           GA G+GL
Sbjct:     2 FKLCLVLVLVIAVDANPAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGL 61

Query:    68 DSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFARPQIDLS 127
             D+    +A GGPPP GA KANLD  T RIIEEFGYQEIGHL RAI    GG  RP I+L+
Sbjct:    62 DAYNATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHL-RAITDMTGGIPRPLINLT 120

Query:   128 RQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLV 187
             R+NFA   D+AVG K  P FDPY+N++NYLLASY IPYVGL GYVGTIP LV    + LV
Sbjct:   121 RENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLV 180

Query:   188 AGLLGVESGQDAVIRTLLYERADQIVVPYK-MTVAEFTDRISALRNRLGKRGNKDEGLRV 246
             AGLLGVESGQDAVIRTLLYER ++ V  Y  +TVAE T+ IS LRN LG  G KDEGL V
Sbjct:   181 AGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCV 240

Query:   247 PRRLGAENRTDXXXXXXXXXXXXXXRTPPEILRIVYGTGSENKXXXXXXXXXXXAVAKRF 306
             P  LGAENRT               RT  EILR++YGTG E++            +A+ F
Sbjct:   241 PLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFWPCGANGRIARMF 300

Query:   307 L 307
             L
Sbjct:   301 L 301

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2202593 AT1G47980 "AT1G47980" [Arabidopsis thaliana (taxid:3702)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 143/271 (52%), Positives = 175/271 (64%)

Query:    40 DKDLIQVALNXXXXXXXXXXNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEE 99
             D+ L++  LN           GALG GLD + P +  GGP P GA KANLD  T  II +
Sbjct:    43 DRKLLEFPLNLEYLEAEFFLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDPLTRDIILQ 102

Query:   100 FGYQEIGHLSRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLA 159
             F +QE+GHL RAI  TV GFARPQ+DLS++ FA + D+A G K  PPF+PY+N+ NYL+A
Sbjct:   103 FAWQEVGHL-RAIKKTVKGFARPQLDLSKKAFAKVMDKAFGVKFVPPFNPYANSYNYLIA 161

Query:   160 SYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYERADQIVVPYKMT 219
             SY++PYVGL GYVG  P L    SR LVAGLLGVESGQDAVIR +LY RA  IV PY +T
Sbjct:   162 SYLVPYVGLTGYVGANPKLQCPASRKLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVT 221

Query:   220 VAEFTDRISALRNRLGKRGNKDEGLRVPRRLGAENRTDXXXXXXXXXXXXXXRTPPEILR 279
             VA FTD+IS LRN+LGK G KDEGL VP+ +GAE +                RTP EILR
Sbjct:   222 VAAFTDKISDLRNKLGKAGVKDEGLIVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILR 281

Query:   280 IVYGTGSENKXXXXXXXXXXXAVAKRFLAAL 310
             IVYG+G+E+             +AK +L  +
Sbjct:   282 IVYGSGNESVPGGFYPKGADGEIAKSYLVTV 312


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      310       275   0.00079  115 3  11 22  0.49    33
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  562 (60 KB)
  Total size of DFA:  160 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.85u 0.09s 21.94t   Elapsed:  00:00:02
  Total cpu time:  21.85u 0.09s 21.94t   Elapsed:  00:00:02
  Start:  Fri May 10 02:11:00 2013   End:  Fri May 10 02:11:02 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	310
pfam13668	137	pfam13668, Ferritin_2, Ferritin-like domain	8e-40

>gnl|CDD|222304 pfam13668, Ferritin_2, Ferritin-like domain

 Score =  135 bits (343), Expect = 8e-40
 Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 36/171 (21%)

Query: 39  NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIE 98
           +D D++  AL LE+LE  F+L    G GLD                +KA LD     + E
Sbjct: 1   SDVDILNFALTLEYLEAAFYLQALAGFGLD--------------DFAKAGLDAAVRALAE 46

Query: 99  EFGYQEIGHLSRAIVTTVGG--FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNY 156
           E    E+ H+ R +   +GG    RP  D                    PFDP+++ +++
Sbjct: 47  EIADHEVAHV-RFLKAALGGAPVPRPTFDF-------------------PFDPFTDRLSF 86

Query: 157 LLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYE 207
           L  +YV+  VG+  Y+G  P L N    +  A +LGVE+   AVIRTLL E
Sbjct: 87  LALAYVLEDVGVSAYLGAAPLLSNKDYLAAAASILGVEARHAAVIRTLLGE 137

This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Length = 137

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	310
PF13668	137	Ferritin_2: Ferritin-like domain	100.0
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	98.4
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	98.36
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	97.58
cd01048	135	Ferritin_like_AB2 Uncharacterized family of ferrit	97.44
COG1633	176	Uncharacterized conserved protein [Function unknow	96.61
PRK13456	186	DNA protection protein DPS; Provisional	96.41
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	96.4
PRK12775	1006	putative trifunctional 2-polyprenylphenol hydroxyl	96.3
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	95.46
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	95.1
PF13668	137	Ferritin_2: Ferritin-like domain	94.87
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	94.6
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	92.56
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	92.48
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	91.94
PRK10635	158	bacterioferritin; Provisional	91.67
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	86.52
TIGR02284	139	conserved hypothetical protein. Members of this pr	85.69
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	85.62
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	81.81

>PF13668 Ferritin_2: Ferritin-like domain

Probab=100.00  E-value=7.7e-33  Score=232.29  Aligned_cols=134  Identities=34%  Similarity=0.615  Sum_probs=124.9

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh-c
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV-G  117 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL-g  117 (310)
                      +|++||||||+|||+|.+||.+++.+.+.++ .              +..+++.+++++++|+.||..|+ ++|++.| |
T Consensus         1 ~D~~iL~~Al~lE~l~~~fY~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~i~~~E~~H~-~~l~~~l~g   64 (137)
T PF13668_consen    1 GDLDILNFALNLEYLEADFYQQAAEGFTLQD-N--------------KAALDPEVRDLFQEIADQEQGHV-DFLQAALEG   64 (137)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhcCChhh-h--------------hccCCHHHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence            5999999999999999999999998877653 1              35678999999999999999999 9999999 6


Q ss_pred             --CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhh
Q 021580          118 --GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVES  195 (310)
Q Consensus       118 --av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA  195 (310)
                        ++++|.+|+                   +||||+|+.+||..|+.||++|+++|+|+++.++|+++++++++|++||+
T Consensus        65 ~~~~~~~~~~~-------------------~~~~~~~~~~~L~~A~~~E~~~~~~Y~g~~~~~~~~~~~~~~~~i~~~Ea  125 (137)
T PF13668_consen   65 GRPVPPPAYDF-------------------PFDPFTDDASFLRLAYTLEDVGVSAYKGAAPQIEDPELKALAASIAGVEA  125 (137)
T ss_pred             CCCCCCCcccc-------------------ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence              778888887                   48999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhh
Q 021580          196 GQDAVIRTLLYE  207 (310)
Q Consensus       196 ~Haa~IRtlL~~  207 (310)
                      +|++|||++|+|
T Consensus       126 ~H~~~ir~ll~~  137 (137)
T PF13668_consen  126 RHAAWIRNLLGQ  137 (137)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999985

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=98.40  E-value=2.8e-06  Score=68.86  Aligned_cols=134  Identities=15%  Similarity=0.181  Sum_probs=103.4

Q ss_pred             hHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcCC--
Q 021580           42 DLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGF--  119 (310)
Q Consensus        42 diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLgav--  119 (310)
                      +|||.|+.+|.....||...+...                       -++.++.++++++.+|..|. +.|...++..  
T Consensus         1 ~~l~~a~~~E~~~~~~Y~~~a~~~-----------------------~~~~~~~~~~~la~eE~~H~-~~l~~~~~~~~~   56 (139)
T cd01045           1 EILALAIKMEEEAAEFYLELAEKA-----------------------KDPELKKLFEELAEEEKEHA-ERLEELYEKLFG   56 (139)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHC-----------------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcc
Confidence            589999999999999999986321                       24578999999999999999 9999888722  


Q ss_pred             -CCCcccccchhhHHHHHhhhcCCCC-CCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhhh
Q 021580          120 -ARPQIDLSRQNFANIFDQAVGYKLT-PPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQ  197 (310)
Q Consensus       120 -~rP~iDls~~~F~~~~~~A~g~~l~-p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~H  197 (310)
                       +-|..+..  .+....   .+.+.. ..+.+-.+..+-|..+.-+|..++.-|.-.+..+.++..+.+...|...|.+|
T Consensus        57 ~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~~~~~~d~~~~~~~~~l~~~E~~H  131 (139)
T cd01045          57 EELPELEPE--DYKEEV---EEEPEFKKALESLMDPLEALRLAIEIEKDAIEFYEELAEKAEDPEVKKLFEELAEEERGH  131 (139)
T ss_pred             ccCCcccHH--HHHHHH---hhhhhHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence             44544432  111110   010000 01224468888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHH
Q 021580          198 DAVIRTL  204 (310)
Q Consensus       198 aa~IRtl  204 (310)
                      ..++|.+
T Consensus       132 ~~~l~~~  138 (139)
T cd01045         132 LRLLEEL  138 (139)
T ss_pred             HHHHHHh
Confidence            9999875

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=98.36  E-value=9.7e-06  Score=62.61  Aligned_cols=128  Identities=21%  Similarity=0.191  Sum_probs=99.5

Q ss_pred             hHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc--CC
Q 021580           42 DLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG--GF  119 (310)
Q Consensus        42 diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg--av  119 (310)
                      .+||-++..|+....+|......                      +. ++.++.++.+++.+|..|. +.|.+.+.  +.
T Consensus         1 ~~L~~~~~~E~~a~~~y~~~~~~----------------------~~-~~~~~~~~~~~a~~E~~H~-~~l~~~~~~~g~   56 (130)
T cd00657           1 RLLNDALAGEYAAIIAYGQLAAR----------------------AP-DPDLKDELLEIADEERRHA-DALAERLRELGG   56 (130)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHH----------------------cC-CHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCC
Confidence            36899999999999999998632                      11 5789999999999999999 99998876  22


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhhhHH
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDA  199 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Haa  199 (310)
                      . |.....  .+.    ..  .   ++..+..+....|..+...|..+...|......+.+++.+.....|...|.+|..
T Consensus        57 ~-~~~~~~--~~~----~~--~---~~~~~~~~~~~~l~~~~~~E~~~~~~y~~~~~~~~d~~~~~~~~~~~~~E~~H~~  124 (130)
T cd00657          57 T-PPLPPA--HLL----AA--Y---ALPKTSDDPAEALRAALEVEARAIAAYRELIEQADDPELRRLLERILADEQRHAA  124 (130)
T ss_pred             C-CCCCHH--HHH----Hh--c---ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence            2 221111  000    00  1   1223346778899999999999999999999988999999999999999999999


Q ss_pred             HHHHHH
Q 021580          200 VIRTLL  205 (310)
Q Consensus       200 ~IRtlL  205 (310)
                      .++.++
T Consensus       125 ~~~~~~  130 (130)
T cd00657         125 WFRKLL  130 (130)
T ss_pred             HHHhhC
Confidence            988653

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=97.58  E-value=0.00047  Score=55.90  Aligned_cols=127  Identities=14%  Similarity=0.126  Sum_probs=97.8

Q ss_pred             hHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CCC
Q 021580           42 DLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GFA  120 (310)
Q Consensus        42 diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av~  120 (310)
                      ++|+.|+..|.-...||...+...         .          ..+  |.++.++.+++.+|..|. +++.+.+. -.+
T Consensus         1 e~L~~A~~~E~~~~~~Y~~~a~~~---------~----------~~~--p~~~~~f~~lA~~E~~H~-~~~~~l~~~~~~   58 (137)
T PF02915_consen    1 EILEMAIKMELEAAKFYRELAEKA---------K----------DEG--PELKELFRRLAEEEQEHA-KFLEKLLRKLGP   58 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------H----------HTT--HHHHHHHHHHHHHHHHHH-HHHHHHHCHCST
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHh---------h----------hcc--cHHHHHHHHHHHHHHHHH-HHHHHHHHhhcc
Confidence            689999999999999999986310         0          111  679999999999999999 99999988 222


Q ss_pred             --CCcccccchhhHHHHHhhhcCCCCCCCCC------CCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHH
Q 021580          121 --RPQIDLSRQNFANIFDQAVGYKLTPPFDP------YSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLG  192 (310)
Q Consensus       121 --rP~iDls~~~F~~~~~~A~g~~l~p~FdP------y~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~  192 (310)
                        .|.+.-.              ...+.+.+      -.|....+..+...|.-++.-|.-.+..+.++..++..-.|..
T Consensus        59 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~a~~~E~~~~~~Y~~~a~~~~~~~~~~~~~~l~~  124 (137)
T PF02915_consen   59 GEEPPFLEE--------------KVEYSFFPKLEEETDENLEEALEMAIKEEKDAYEFYAELARKAPDPEIRKLFEELAK  124 (137)
T ss_dssp             THHTHCHCC--------------CCCHCCCCTCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred             ccCcchhhh--------------hhhhhhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence              2321000              00011221      1256778888999999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHH
Q 021580          193 VESGQDAVIRTL  204 (310)
Q Consensus       193 VEA~Haa~IRtl  204 (310)
                      .|.+|...++.+
T Consensus       125 ~E~~H~~~l~~l  136 (137)
T PF02915_consen  125 EEKEHEDLLEKL  136 (137)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999998865

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd01048 Ferritin_like_AB2 Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=97.44  E-value=0.0013  Score=56.21  Aligned_cols=125  Identities=18%  Similarity=0.158  Sum_probs=98.0

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc--C
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG--G  118 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg--a  118 (310)
                      .++|.||+..|++.-+||......+|                          .++++..|+..|+.|. .+|+..+.  .
T Consensus         2 ~~~L~~Ale~Ek~a~~~Y~~~~~k~~--------------------------~~~~F~~la~~E~~H~-~~l~~L~~~~~   54 (135)
T cd01048           2 IAALLYALEEEKLARDVYLALYEKFG--------------------------GLRPFSNIAESEQRHM-DALKTLLERYG   54 (135)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--------------------------CcchHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            57999999999999999999874321                          3567888999999999 99999998  8


Q ss_pred             CCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhhhH
Q 021580          119 FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQD  198 (310)
Q Consensus       119 v~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Ha  198 (310)
                      ++.|..+...+.|...-   .. .+  ......+..+-|..+..+|...+.=|.-++...+|++++.+--.+...|-.|-
T Consensus        55 ~~~p~~~~~~~~f~~~~---~~-~l--~~~~~~s~~~al~~g~~~E~~~i~~ye~~~~~~~d~d~k~v~~~L~~~e~~H~  128 (135)
T cd01048          55 LPDPVDPFSGGVFTNPQ---YN-QL--VEQGPKSLQDALEVGVLIEELDIADYDRLLERTQNPDIRDVFENLQAASRNHH  128 (135)
T ss_pred             CCCCCCccccccccchh---HH-HH--HHhccccHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            88887766554443110   00 00  00123578888999999999999999999999999999999888888888775

Ferritin-like domain found in archaea and bacteria, subgroup 2 (Ferritin_like_AB2). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. The conserved residues of a diiron center are present within the putative active site.

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=96.61  E-value=0.045  Score=49.20  Aligned_cols=142  Identities=16%  Similarity=0.152  Sum_probs=103.8

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .+-.++|++|+..|.=.-.||.+.+.-                       --++.++..+.+|+.+|..|. +-+++-+.
T Consensus        23 ~~~~e~L~~Ai~~E~eA~~fY~~lae~-----------------------~~~~~~rk~~~~la~eE~~H~-~~f~~l~~   78 (176)
T COG1633          23 LSIEELLAIAIRGELEAIKFYEELAER-----------------------IEDEEIRKLFEDLADEEMRHL-RKFEKLLE   78 (176)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cCCHhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            467899999999999888999998621                       135689999999999999999 99998877


Q ss_pred             -CCCCCcccccc--hhhHHHHHhhhcCCCCC--CCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHH
Q 021580          118 -GFARPQIDLSR--QNFANIFDQAVGYKLTP--PFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLG  192 (310)
Q Consensus       118 -av~rP~iDls~--~~F~~~~~~A~g~~l~p--~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~  192 (310)
                       -.++|.-....  ..+..+     .....|  .++.=.|...=+..|.--|--.+--|...+-.+.|.+.+.+.-.|..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~I~~a~~~E~~t~~~Y~~~~~~~~~~~~~~~~~~~a~  153 (176)
T COG1633          79 KLTPKEVSSEEEEGEIESEI-----LEYLQPGKEMEKSVSYLEAIEAAMEAEKDTIEFYEELLDELVNEEAKKLFKTIAD  153 (176)
T ss_pred             HhcCCccchhhhhcchhhhh-----ccccCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence             34444211111  001100     011111  23333444555666777799999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHhhh
Q 021580          193 VESGQDAVIRTLLYER  208 (310)
Q Consensus       193 VEA~Haa~IRtlL~~~  208 (310)
                      .|=+|..+++..+...
T Consensus       154 ~E~~H~~~l~~~~~~~  169 (176)
T COG1633         154 DEKGHASGLLSLYNRL  169 (176)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999876653

>PRK13456 DNA protection protein DPS; Provisional

Probab=96.41  E-value=0.031  Score=51.00  Aligned_cols=140  Identities=17%  Similarity=0.158  Sum_probs=98.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      +++||=||.-||+-.=.|.....           ...|+         ..+.+...+++-+.+|..|. +.|-.-|   |
T Consensus        22 i~lLn~AlA~E~~a~~~Y~~~a~-----------~~~G~---------~~e~V~e~le~a~~EEl~HA-~~lAeRI~qLG   80 (186)
T PRK13456         22 VELLVKNAAAEFTTYYYYTILRA-----------HLIGL---------EGEGLKEIAEDARLEDRNHF-EALVPRIYELG   80 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-----------HHhCc---------CcHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence            78999999999988766666542           11111         24678899999999999999 9988654   4


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccC--ChhHHHHHHHHHHHhh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLV--NCTSRSLVAGLLGVES  195 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~--~~~~l~aAA~Il~VEA  195 (310)
                      +.|  ..|.  ..|-.+...  ++ +.+|=|| +|...+|...-.=|...+..|.=....+.  |+....++-.||+.|-
T Consensus        81 G~P--~~~p--~~~~~ls~~--~~-~~~p~d~-tdv~~mL~~~L~AEr~AI~~Y~eii~~~~~kDp~T~~l~~~IL~dE~  152 (186)
T PRK13456         81 GKL--PRDI--REFHDISAC--PD-AYLPENP-TDPKEILKVLLEAERCAIRTYTEICDMTAGKDPRTYDLALAILQEEI  152 (186)
T ss_pred             CCC--CCCh--HHHhhhhcC--cc-ccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence            443  2221  123222111  11 0112222 46788999998899999999997777665  4557889999999999


Q ss_pred             hhHHHHHHHHhhhh
Q 021580          196 GQDAVIRTLLYERA  209 (310)
Q Consensus       196 ~Haa~IRtlL~~~~  209 (310)
                      .|..++..+|..+.
T Consensus       153 eH~~dl~~lL~~~~  166 (186)
T PRK13456        153 EHEAWFSELLGGGP  166 (186)
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999998643

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=96.40  E-value=0.021  Score=48.89  Aligned_cols=105  Identities=14%  Similarity=0.068  Sum_probs=80.0

Q ss_pred             CHHHHHHHHHHHHhHHHHHHHHHHHhhc---CCCCCcccccchhhHHHHHhhhcCCCCC-CCCCCCChHHHHHHHhhccc
Q 021580           90 DHTTYRIIEEFGYQEIGHLSRAIVTTVG---GFARPQIDLSRQNFANIFDQAVGYKLTP-PFDPYSNTVNYLLASYVIPY  165 (310)
Q Consensus        90 ~~~v~~~~~eia~~E~~HV~~~L~~aLg---av~rP~iDls~~~F~~~~~~A~g~~l~p-~FdPy~n~~~FL~~A~v~E~  165 (310)
                      ++.+++.+.+++.+|..|. +.|...++   +.|...- .....|         .++.+ .+.+-.|....|..+..+|.
T Consensus        46 ~~~~k~~f~~lA~eE~~H~-~~l~~~i~~lgg~p~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~L~~~~~~E~  114 (154)
T cd07908          46 YPEIAETFLGIAIVEMHHL-EILGQLIVLLGGDPRYRS-SSSDKF---------TYWTGKYVNYGESIKEMLKLDIASEK  114 (154)
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCcchh-hccccC---------CcCCccccCCccCHHHHHHHHHHHHH
Confidence            5789999999999999999 99998865   4343111 110011         11111 12223467889999999999


Q ss_pred             hhHhhhcccccccCChhHHHHHHHHHHHhhhhHHHHHHHH
Q 021580          166 VGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLL  205 (310)
Q Consensus       166 VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Haa~IRtlL  205 (310)
                      -++.-|..++..+.|++.+.+.-.|+.-|-.|..++..+|
T Consensus       115 ~ai~~Y~~~~~~~~d~~~r~ll~~I~~eE~~H~~~L~~~l  154 (154)
T cd07908         115 AAIAKYKRQAETIKDPYIRALLNRIILDEKLHIKILEELL  154 (154)
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999987654

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional

Probab=96.30  E-value=0.06  Score=59.72  Aligned_cols=142  Identities=13%  Similarity=0.108  Sum_probs=109.1

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      ..++.|||.+|+.+|==--+||...+..                      + -++.+++++.++|..|..|. +.|++.+
T Consensus       858 ~~~~~eil~~Ai~mE~~g~~FY~~~A~~----------------------a-~~~~~K~lF~~LA~eE~~H~-~~l~~~~  913 (1006)
T PRK12775        858 DAAALEAIRTAFEIELGGMAFYARAAKE----------------------T-SDPVLKELFLKFAGMEQEHM-ATLARRY  913 (1006)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHH----------------------c-CCHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            4678999999999999888999998732                      1 36789999999999999999 9998877


Q ss_pred             c-CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChh-HHHHHHHHHHHh
Q 021580          117 G-GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCT-SRSLVAGLLGVE  194 (310)
Q Consensus       117 g-av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~-~l~aAA~Il~VE  194 (310)
                      . ..+.+.-|+.  .+    +...-..+   +++..++.+.|..|.-+|.=.+.=|..++-...+++ .+++.-.|..-|
T Consensus       914 ~~~~~~~~~~~~--~~----~~~~~~~~---~~~~~~~~~al~lAm~~Ekdai~fY~~la~~~~d~e~~k~l~~~LA~EE  984 (1006)
T PRK12775        914 HAAAPSPTEGFK--IE----RAAIMAGV---KGRPDDPGNLFRIAIEFERRAVKFFKERVAETPDGSVERQLYKELAAEE  984 (1006)
T ss_pred             hhccCCcccccc--cc----hhhhhhhh---ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHH
Confidence            6 3333222221  00    00000011   123456788999999999999999999999999986 699999999999


Q ss_pred             hhhHHHHHHHHhhhhhc
Q 021580          195 SGQDAVIRTLLYERADQ  211 (310)
Q Consensus       195 A~Haa~IRtlL~~~~~~  211 (310)
                      -.|-..+..++.+.+.-
T Consensus       985 k~Hl~~L~~~~d~~~~~ 1001 (1006)
T PRK12775        985 REHVALLTTEFERWKQG 1001 (1006)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999988876643

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=95.46  E-value=0.45  Score=39.62  Aligned_cols=121  Identities=16%  Similarity=0.122  Sum_probs=84.1

Q ss_pred             HHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc--CCC
Q 021580           43 LIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG--GFA  120 (310)
Q Consensus        43 iLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg--av~  120 (310)
                      .+|=.+.-|.-...||...+.-                       --++.++.++.+++.+|..|. +++++.++  +.+
T Consensus         2 ~~~~~~~~E~~~~~~Y~~la~~-----------------------~~~~~~k~~f~~lA~~E~~H~-~~~~~~~~~~~~~   57 (125)
T cd01044           2 RLRKFQKDEITEAAIYRKLAKR-----------------------EKDPENREILLKLAEDERRHA-EFWKKFLGKRGVP   57 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC
Confidence            4667788999999999998621                       125679999999999999999 99999988  333


Q ss_pred             CCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhhhHHH
Q 021580          121 RPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAV  200 (310)
Q Consensus       121 rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Haa~  200 (310)
                      .|.=++. ..|-......+            +....+..+.-.|.-++.-|......      +...-.|..-|-.|-..
T Consensus        58 ~~~~~~~-~~~~~~l~~~~------------g~~~~l~~~~~~E~~ai~~Y~~~~~~------~~~~~~Ii~dE~~H~~~  118 (125)
T cd01044          58 PPRPKLK-IFFYKLLARIF------------GPTFVLKLLERGEERAIEKYDRLLEE------RPELKEIIADELEHEEV  118 (125)
T ss_pred             CCCccHH-HHHHHHHHHHH------------hHHHHHHHHHHhHHhhHhhHHhhhhh------hHHHHHHHHHHHHHHHH
Confidence            2200111 01111111111            22345666667898899999887655      55667899999999999


Q ss_pred             HHHHHh
Q 021580          201 IRTLLY  206 (310)
Q Consensus       201 IRtlL~  206 (310)
                      ++.++.
T Consensus       119 L~~~~~  124 (125)
T cd01044         119 LIALLD  124 (125)
T ss_pred             HHHhhh
Confidence            887763

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=95.10  E-value=0.72  Score=38.63  Aligned_cols=138  Identities=16%  Similarity=0.112  Sum_probs=94.1

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||-+|+.|+.-...|..-..-         +  .|        .++ ..+...+++++.+|..|+ +.|-.-+- =-
T Consensus         8 ~~~Ln~~la~e~~~~~~y~~~~~~---------~--~g--------~~f-~~l~~~~~~~~~ee~~Ha-d~laEri~~lG   66 (148)
T cd01052           8 IELLNKAFADEWLAYYYYTILAKH---------V--KG--------PEG-EGIKEELEEAAEEELNHA-ELLAERIYELG   66 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------H--cC--------Cch-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence            467999999999887777664320         0  01        111 468999999999999999 77765543 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc--CChhHHHHHHHHHHHhhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL--VNCTSRSLVAGLLGVESGQ  197 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l--~~~~~l~aAA~Il~VEA~H  197 (310)
                      .+|.....  .|...    .++.+..+-.-..+....+-...--|...+..|.......  .|.......-.|+.-|-.|
T Consensus        67 g~p~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~~~~~~~a~~~D~~t~~ll~~~l~de~~h  140 (148)
T cd01052          67 GTPPRDPK--DWYEI----SGCKCGYLPPDPPDVKGILKVNLKAERCAIKVYKELCDMTHGKDPVTYDLALAILNEEIEH  140 (148)
T ss_pred             CCCCCChH--HHHHH----hcccccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence            22443321  22211    1111111111235778899999999999999999888765  5666788889999999999


Q ss_pred             HHHHHHHH
Q 021580          198 DAVIRTLL  205 (310)
Q Consensus       198 aa~IRtlL  205 (310)
                      ..|++++|
T Consensus       141 ~~~~~~~~  148 (148)
T cd01052         141 EEDLEELL  148 (148)
T ss_pred             HHHHHhhC
Confidence            99999875

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>PF13668 Ferritin_2: Ferritin-like domain

Probab=94.87  E-value=0.25  Score=41.30  Aligned_cols=56  Identities=18%  Similarity=0.167  Sum_probs=48.7

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .+|.++|.+|+.+|..-..+|..++.-                       --++.++..+..|+..|..|. ..||..|+
T Consensus        81 ~~~~~~L~~A~~~E~~~~~~Y~g~~~~-----------------------~~~~~~~~~~~~i~~~Ea~H~-~~ir~ll~  136 (137)
T PF13668_consen   81 TDDASFLRLAYTLEDVGVSAYKGAAPQ-----------------------IEDPELKALAASIAGVEARHA-AWIRNLLG  136 (137)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence            478999999999999999999988621                       016789999999999999999 99998875

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=94.60  E-value=1.1  Score=37.61  Aligned_cols=130  Identities=14%  Similarity=0.086  Sum_probs=92.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||-+++.||--...|..-..-.  +         +        .++ +.+...+.+++.+|..|. +.|-.-+. --
T Consensus         7 ~~~Ln~~l~~E~~a~~~Y~~~a~~~--~---------~--------~~~-~~~~~~f~~~a~ee~~Ha-~~lae~i~~lG   65 (153)
T cd00907           7 IEALNKALTGELTAINQYFLHARML--E---------D--------WGL-EKLAERFRKESIEEMKHA-DKLIERILFLE   65 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--H---------c--------CCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            5789999999999888888543210  0         0        111 467899999999999999 77666553 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VEA~  196 (310)
                      .+|.+...                .++ ....+....|..+.--|.--+..|.-...   ...++......-.|+..|-.
T Consensus        66 g~p~~~~~----------------~~~-~~~~~~~~~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~~~~~e~~  128 (153)
T cd00907          66 GLPNLQRL----------------GKL-RIGEDVPEMLENDLALEYEAIAALNEAIALCEEVGDYVSRDLLEEILEDEEE  128 (153)
T ss_pred             CCCCCCcC----------------CCC-CcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            23332110                011 11236777888888888888999998754   35788889999999999999


Q ss_pred             hHHHHHHHHhhh
Q 021580          197 QDAVIRTLLYER  208 (310)
Q Consensus       197 Haa~IRtlL~~~  208 (310)
                      |..+++.++..-
T Consensus       129 h~~~l~~~l~~~  140 (153)
T cd00907         129 HIDWLETQLDLI  140 (153)
T ss_pred             HHHHHHHHHHHH
Confidence            999999988753

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=92.56  E-value=0.55  Score=40.17  Aligned_cols=56  Identities=11%  Similarity=0.088  Sum_probs=47.0

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      ..+..++|.+++.+|.=--+||...+.-                       --|+.+++++++|..+|..|. +.|++.|
T Consensus        99 ~~~~~~~L~~~~~~E~~ai~~Y~~~~~~-----------------------~~d~~~r~ll~~I~~eE~~H~-~~L~~~l  154 (154)
T cd07908          99 GESIKEMLKLDIASEKAAIAKYKRQAET-----------------------IKDPYIRALLNRIILDEKLHI-KILEELL  154 (154)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHhhC
Confidence            3467889999999999888999998631                       136889999999999999999 9887653

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=92.48  E-value=0.52  Score=37.84  Aligned_cols=55  Identities=24%  Similarity=0.303  Sum_probs=47.1

Q ss_pred             CCCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHH
Q 021580           36 IEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVT  114 (310)
Q Consensus        36 ~~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~  114 (310)
                      ...++.++|..|+..|---.+||...+..                       ..++.++.++++|..+|..|. +.|+.
T Consensus        83 ~~~~~~~~l~~a~~~E~~~~~~Y~~~~~~-----------------------~~d~~~~~~~~~l~~~E~~H~-~~l~~  137 (139)
T cd01045          83 SLMDPLEALRLAIEIEKDAIEFYEELAEK-----------------------AEDPEVKKLFEELAEEERGHL-RLLEE  137 (139)
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHH
Confidence            45678999999999999888999998631                       136789999999999999999 88875

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=91.94  E-value=1.7  Score=38.20  Aligned_cols=98  Identities=15%  Similarity=0.110  Sum_probs=79.5

Q ss_pred             CHHHHHHHHHHHHhHHHHHHHHHHHhhc---C--CCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhcc
Q 021580           90 DHTTYRIIEEFGYQEIGHLSRAIVTTVG---G--FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIP  164 (310)
Q Consensus        90 ~~~v~~~~~eia~~E~~HV~~~L~~aLg---a--v~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E  164 (310)
                      ++.+++.+.+|+.+|..|+ ..|-..+.   +  ...|-   ++                +..++-.|...-|......|
T Consensus        52 ~~~~~d~l~~ia~eEm~H~-e~la~~I~~Lg~~~~g~pw---~~----------------~yv~~~~d~~~~L~~ni~aE  111 (156)
T cd01051          52 DPKYRDLLLDIGTEELSHL-EMVATLIAMLLKDSQGVPW---TA----------------AYIQSSGNLVADLRSNIAAE  111 (156)
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCCcC---CC----------------cccCCCCCHHHHHHHHHHHH
Confidence            4789999999999999999 99887764   2  11221   11                01334467777888888889


Q ss_pred             chhHhhhcccccccCChhHHHHHHHHHHHhhhhHHHHHHHHhh
Q 021580          165 YVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQDAVIRTLLYE  207 (310)
Q Consensus       165 ~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Haa~IRtlL~~  207 (310)
                      .-+..-|.=.+..++|+..+...--|+.-|-.|.-.++.+|.+
T Consensus       112 ~~Ai~~Y~~l~~~~~Dp~v~~~l~~I~~rE~~H~~~f~~~l~~  154 (156)
T cd01051         112 SRARLTYERLYEMTDDPGVKDTLSFLLVREIVHQNAFGKALES  154 (156)
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999888764

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

>PRK10635 bacterioferritin; Provisional

Probab=91.67  E-value=7.1  Score=34.39  Aligned_cols=130  Identities=15%  Similarity=0.161  Sum_probs=90.2

Q ss_pred             hhhHHhhHHHHHHHHHHHH-HhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh--
Q 021580           40 DKDLIQVALNLEFLETEFF-LNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV--  116 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY-~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL--  116 (310)
                      =++.||=+|+.|+.-..=| .++..          +...|          ++.. ......-+.+|..|..++++.-+  
T Consensus         7 vi~~LN~~L~~El~Ai~QY~~ha~~----------~~~~G----------~~~l-a~~~~~ea~eEm~HA~~l~eRIl~L   65 (158)
T PRK10635          7 IINYLNKLLGNELVAINQYFLHARM----------FKNWG----------LMRL-NDVEYHESIDEMKHADKYIERILFL   65 (158)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----------HHcCC----------cHHH-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3688999999999888444 44432          11111          2222 22333338899999944444443  


Q ss_pred             cCCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHH
Q 021580          117 GGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGV  193 (310)
Q Consensus       117 gav~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~V  193 (310)
                      |+.|  .++-                + ++..+-.|....|......|.-.+.-|.=++..   ..++..+.+...|+.-
T Consensus        66 gG~P--~~~~----------------~-~~~~~g~~v~eml~~dl~~E~~ai~~y~e~i~~a~~~~D~~s~~ll~~iL~d  126 (158)
T PRK10635         66 EGIP--NLQD----------------L-GKLNIGEDVEEMLRSDLRLELEGAKDLREAIAYADSVHDYVSRDMMIEILAD  126 (158)
T ss_pred             CCCC--CCCC----------------C-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            3444  2211                1 123334689999999999999999999988886   5678889999999999


Q ss_pred             hhhhHHHHHHHHhhhh
Q 021580          194 ESGQDAVIRTLLYERA  209 (310)
Q Consensus       194 EA~Haa~IRtlL~~~~  209 (310)
                      |-.|.-|+.+.|....
T Consensus       127 Ee~H~~~le~~l~~i~  142 (158)
T PRK10635        127 EEGHIDWLETELDLIG  142 (158)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999888644

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=86.52  E-value=12  Score=28.33  Aligned_cols=56  Identities=16%  Similarity=0.085  Sum_probs=45.9

Q ss_pred             CCCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHh
Q 021580           36 IEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTT  115 (310)
Q Consensus        36 ~~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~a  115 (310)
                      ...++.++|..+...|--...+|......                      + -++.+++++..+..+|..|+ +.++..
T Consensus        74 ~~~~~~~~l~~~~~~E~~~~~~y~~~~~~----------------------~-~d~~~~~~~~~~~~~E~~H~-~~~~~~  129 (130)
T cd00657          74 TSDDPAEALRAALEVEARAIAAYRELIEQ----------------------A-DDPELRRLLERILADEQRHA-AWFRKL  129 (130)
T ss_pred             CccCHHHHHHHHHHHHHHHHHHHHHHHHh----------------------c-CChHHHHHHHHHHHHHHHHH-HHHHhh
Confidence            45677889999999999888999877521                      1 16789999999999999999 988764

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>TIGR02284 conserved hypothetical protein

Probab=85.69  E-value=19  Score=30.87  Aligned_cols=135  Identities=13%  Similarity=0.090  Sum_probs=94.7

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||=.+...|=--++|..++.-                      + =++.++.++++++.+...|+ .-|+..+. --
T Consensus         2 i~~Ln~Lie~~~D~~~gY~~aae~----------------------v-~~~~lk~~f~~~~~~~~~~~-~eL~~~v~~lG   57 (139)
T TIGR02284         2 IHSLNDLIEISIDGKDGFEESAEE----------------------V-KDPELATLFRRIAGEKSAIV-SELQQVVASLG   57 (139)
T ss_pred             hHHHHHHHHHcccHHHHHHHHHHH----------------------C-CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence            467888888888777999998731                      1 25789999999999999999 99998886 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc-CChhHHHHHHHHHHHhhhhH
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL-VNCTSRSLVAGLLGVESGQD  198 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l-~~~~~l~aAA~Il~VEA~Ha  198 (310)
                      ..|.-   .++|...+..+.- .+...|.+ .++..+|....-=|+..+.+|.-+...- -.++++...-..+.-+-+|.
T Consensus        58 g~p~~---~gs~~g~lhr~w~-~lks~~~~-~~d~aiL~~~e~gEd~~~~~y~~aL~~~~l~~~~r~~l~~q~~~i~~~~  132 (139)
T TIGR02284        58 GKPED---HGSMVGSLHQFWG-KIRATLTP-NDDYVVLEEAERGEDRAKKAYDETLADQDTPAAARDVALRQYPGVRACH  132 (139)
T ss_pred             CCCCC---CCcHHHHHHHHHH-HHHHHHcC-CChHHHHHHHHHhHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHH
Confidence            23331   1244433333210 00001222 4688899999999999999999998765 56777888888887777777


Q ss_pred             HHHHHH
Q 021580          199 AVIRTL  204 (310)
Q Consensus       199 a~IRtl  204 (310)
                      .+||.+
T Consensus       133 d~i~~l  138 (139)
T TIGR02284       133 DVIRAL  138 (139)
T ss_pred             HHHHhc
Confidence            777754

Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=85.62  E-value=2.5  Score=33.92  Aligned_cols=53  Identities=21%  Similarity=0.208  Sum_probs=44.2

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHh
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTT  115 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~a  115 (310)
                      +...+|..|+..|---..||...+..                       .-++.+++++.+|+.+|..|+ +.|+..
T Consensus        84 ~~~~~l~~a~~~E~~~~~~Y~~~a~~-----------------------~~~~~~~~~~~~l~~~E~~H~-~~l~~l  136 (137)
T PF02915_consen   84 NLEEALEMAIKEEKDAYEFYAELARK-----------------------APDPEIRKLFEELAKEEKEHE-DLLEKL  136 (137)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHH-----------------------TTSHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence            36788899999998888999998632                       136889999999999999999 988763

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=81.81  E-value=29  Score=28.93  Aligned_cols=126  Identities=12%  Similarity=-0.058  Sum_probs=88.8

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-C
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-G  118 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-a  118 (310)
                      ..+.||=|+.-|+-....|..-+.-                   ++.-++ +.+.+.+..++..|..|. .-+.+.|. -
T Consensus         2 t~~~L~~a~~~E~~a~~~Y~~~a~~-------------------a~~~g~-~~~a~~f~~~a~eE~~HA-~~~~~~l~~l   60 (134)
T cd01041           2 TEKNLLAAFAGESQARNRYTYFAEK-------------------ARKEGY-EQIARLFRATAENEKEHA-KGHFKLLKGL   60 (134)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHH-------------------HHHCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHhcC
Confidence            3578999999999877777654321                   011222 467888999999999999 77766665 1


Q ss_pred             CCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccch-hHhhhccccc---ccCChhHHHHHHHHHHHh
Q 021580          119 FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYV-GLVGYVGTIP---NLVNCTSRSLVAGLLGVE  194 (310)
Q Consensus       119 v~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~V-GvtAY~Gaap---~l~~~~~l~aAA~Il~VE  194 (310)
                      -..|.                     +|-.++.+...-|..+.--|.- ....|.-.+.   .-.+..+....-.|+..|
T Consensus        61 ~g~~~---------------------~~~~~~~~~~~~l~~~~~~E~~e~~~~y~~~~~~A~~e~d~~~~~~f~~i~~~E  119 (134)
T cd01041          61 GGGDT---------------------GPPIGIGDTLENLKAAIAGETYEYTEMYPEFAEVAEEEGFKEAARSFEAIAEAE  119 (134)
T ss_pred             CCCCc---------------------CCCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            12222                     1223456777888888888873 5577765554   455677788888999999


Q ss_pred             hhhHHHHHHHHhh
Q 021580          195 SGQDAVIRTLLYE  207 (310)
Q Consensus       195 A~Haa~IRtlL~~  207 (310)
                      .+|.-++..+|..
T Consensus       120 ~~H~~~l~~~l~~  132 (134)
T cd01041         120 KVHAERYKKALEN  132 (134)
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999988764

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	310
2ib0_A	170	Conserved hypothetical alanine rich protein; 4-hel	98.41
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	97.84
2fzf_A	175	Hypothetical protein; structural genomics, southea	97.71
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	97.63
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	96.39
3fse_A	365	Two-domain protein containing DJ-1/THIJ/PFPI-like	95.83
3q4o_A	196	Uncharacterized protein MJ0754; ferritin-like prot	95.6
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	95.39
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	95.12
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	94.88
4etr_A	153	Putative uncharacterized protein; DUF2383, domain	94.8
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	94.78
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	94.37
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	94.3
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	94.18
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	93.78
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	93.78
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	93.32
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	92.06
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	91.72
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	91.57
2fzf_A	175	Hypothetical protein; structural genomics, southea	89.18
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	87.94
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	82.42

>2ib0_A Conserved hypothetical alanine rich protein; 4-helix bundle, structural genomics, PSI-2, protein structur initiative; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.9

Probab=98.41  E-value=5.4e-07  Score=79.24  Aligned_cols=133  Identities=14%  Similarity=0.128  Sum_probs=106.0

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      +..|+++||-||..||  +.-|-+++-                      .+.+++.+++.+.+...+...|. +.|+.+|
T Consensus        19 ~~~d~~aL~~ALaaEh--aAIyaYGv~----------------------~a~l~~~~~~~a~~~~~~HrarR-D~L~~~l   73 (170)
T 2ib0_A           19 GSADNAALCDALAVEH--ATIYGYGIV----------------------SALSPPGVNFLVADALKQHRHRR-DDVIVML   73 (170)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHHHHHH----------------------HHHSCGGGHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CchHHHHHHHHHHHHH--HHHHHHHHH----------------------HhccChHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            3568999999999999  333444431                      13467889999999999999999 9999998


Q ss_pred             c-CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhh
Q 021580          117 G-GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVES  195 (310)
Q Consensus       117 g-av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA  195 (310)
                      . .-..|.-.            +-+|.|  ||+ ..|..+-+..+..+|.=...+|.++.+...+++.++.++++|+.++
T Consensus        74 ~~~G~~pp~a------------~aaY~l--P~~-v~d~asa~~lAa~lE~~~A~ay~~~v~~a~~~~~R~~A~~aL~~aA  138 (170)
T 2ib0_A           74 SARGVTAPIA------------AAGYQL--PMQ-VSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESA  138 (170)
T ss_dssp             HHTTCCCCCC------------CSSCCC--SSC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCC------------cCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            7 11111100            113443  454 5899999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHhhhh
Q 021580          196 GQDAVIRTLLYERA  209 (310)
Q Consensus       196 ~Haa~IRtlL~~~~  209 (310)
                      .|+...|..+++..
T Consensus       139 vr~a~wr~alG~~P  152 (170)
T 2ib0_A          139 VMATRWNRVLGAWP  152 (170)
T ss_dssp             HHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhcCCCC
Confidence            99999999999865

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=97.84  E-value=0.00028  Score=59.85  Aligned_cols=139  Identities=12%  Similarity=0.044  Sum_probs=106.0

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGG  118 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLga  118 (310)
                      +..++|+.|+..|.-...||...+..  ++                  ..-++.++.++.+++.+|..|. +.|++..+.
T Consensus         5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~--~~------------------~~~~~~~k~~f~~LA~eE~~H~-~~l~~~~~~   63 (167)
T 2oh3_A            5 TLAEFLAHAIALETEAAERYVELADM--ME------------------AHNNLDTATVFRDMARFSTLHG-DEIKQRSRA   63 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH--HH------------------HTTCHHHHHHHHHHHHHHHHHH-HHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHH--HH------------------hCCCHHHHHHHHHHHHHHHHHH-HHHHHHHhc
Confidence            47899999999999999999888630  00                  0125789999999999999999 999998773


Q ss_pred             --CCC-CcccccchhhHHHHHhhhcCCCC-C--CCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHH
Q 021580          119 --FAR-PQIDLSRQNFANIFDQAVGYKLT-P--PFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLG  192 (310)
Q Consensus       119 --v~r-P~iDls~~~F~~~~~~A~g~~l~-p--~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~  192 (310)
                        .|. |..++-   |.       +.+.. +  ..++..+....|..|.-.|.-+..-|.-++....|+..+.+.-.|..
T Consensus        64 ~~~~~~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~a~~~~d~~~k~~~~~la~  133 (167)
T 2oh3_A           64 LELPKLMSWQYR---WK-------TPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGADFAA  133 (167)
T ss_dssp             SCCCCCCGGGTS---CC-------CCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             CCCCcccccccc---CC-------CcHhhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence              231 222220   00       00000 0  12344578888999999999999999999999999999999999999


Q ss_pred             HhhhhHHHHHHHHhhh
Q 021580          193 VESGQDAVIRTLLYER  208 (310)
Q Consensus       193 VEA~Haa~IRtlL~~~  208 (310)
                      .|..|..+++.++...
T Consensus       134 eE~~H~~~l~~~~~~~  149 (167)
T 2oh3_A          134 EEAEHVVALDKWIEKT  149 (167)
T ss_dssp             HHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHc
Confidence            9999999999987653

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=97.71  E-value=0.00038  Score=59.31  Aligned_cols=137  Identities=13%  Similarity=0.037  Sum_probs=105.7

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .+-.++|+.|+..|.-...||...+...                       -++.+++++.+++.+|..|. +.+.+.+.
T Consensus        19 ~~~~e~L~~A~~~E~~a~~~Y~~~A~~~-----------------------~~~~~~~~f~~lA~~E~~H~-~~l~~~~~   74 (175)
T 2fzf_A           19 FSLEELLGMAIKAEIGAREFYKSLAEKI-----------------------KIEALKEKINWLAEEEKKHE-ALLRKLYS   74 (175)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHSC-----------------------CCTTHHHHHHHHHHHTHHHH-HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            4568999999999999999999987321                       13679999999999999999 99888765


Q ss_pred             ----CCCCCcccccchhhHHHHHhhhcCCCCCC---CCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHH
Q 021580          118 ----GFARPQIDLSRQNFANIFDQAVGYKLTPP---FDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGL  190 (310)
Q Consensus       118 ----av~rP~iDls~~~F~~~~~~A~g~~l~p~---FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~I  190 (310)
                          ..+.|..+.  ..|.         .+.|.   +....+....|..+.-.|.-...-|.-.+....++..+.+.-.|
T Consensus        75 ~l~g~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~d~~~r~l~~~i  143 (175)
T 2fzf_A           75 QMFPGKEVVFPKE--HIGP---------ELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYL  143 (175)
T ss_dssp             HHSTTCCCCCCSC--CBSC---------CCCCCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHH
T ss_pred             HhcCCCCCcchhh--hhhh---------hhhhhHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHH
Confidence                333333211  0110         01111   22234577788889999999999999999999999999999999


Q ss_pred             HHHhhhhHHHHHHHHhhhh
Q 021580          191 LGVESGQDAVIRTLLYERA  209 (310)
Q Consensus       191 l~VEA~Haa~IRtlL~~~~  209 (310)
                      ...|..|...++.++..-.
T Consensus       144 a~eE~~H~~~l~~~l~~l~  162 (175)
T 2fzf_A          144 ADMERGHYYTLRAEYELLL  162 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999877643

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=97.63  E-value=0.00073  Score=56.92  Aligned_cols=139  Identities=16%  Similarity=0.119  Sum_probs=104.7

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      +.+..++|..|+..|.-...||...+.                        --++.+++++.+++.+|..|. +.|++..
T Consensus        12 ~~~~~e~L~~Ai~~E~~~~~~Y~~lA~------------------------~~~~~~k~lF~~LA~eE~~H~-~~l~~l~   66 (157)
T 1vjx_A           12 HMKVSDILTVAIRLEEEGERFYRELSE------------------------HFNGEIKKTFLELADQERIHA-EIFRKMS   66 (157)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHHTT------------------------SCCSHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHH------------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHhh
Confidence            567899999999999999999999862                        125789999999999999999 9999875


Q ss_pred             cCCCCCcccccchhhHHHHHhhhcCCCCCCCC-----CCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHH
Q 021580          117 GGFARPQIDLSRQNFANIFDQAVGYKLTPPFD-----PYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLL  191 (310)
Q Consensus       117 gav~rP~iDls~~~F~~~~~~A~g~~l~p~Fd-----Py~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il  191 (310)
                      ....-|....   -|..+.    ...+-|.+.     +..+...-|..|.-.|.-.+.-|.-++..+.++..+++...|.
T Consensus        67 ~~~~~~~~~~---~l~~~~----~~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~~a~~~~d~~~k~l~~~la  139 (157)
T 1vjx_A           67 DQENWDEVDS---YLAGYA----FYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKII  139 (157)
T ss_dssp             HHSCHHHHTC---BCCSBC----CCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHH
T ss_pred             ccCcchhHHH---HHHhhh----hhhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence            4111111000   000000    000101111     3356788899999999999999999999999999999999999


Q ss_pred             HHhhhhHHHHHHHHhh
Q 021580          192 GVESGQDAVIRTLLYE  207 (310)
Q Consensus       192 ~VEA~Haa~IRtlL~~  207 (310)
                      ..|..|...++.++.+
T Consensus       140 ~eE~~H~~~l~~~~~~  155 (157)
T 1vjx_A          140 DQEKEHLRKLLEMKRE  155 (157)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988765

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=96.39  E-value=0.078  Score=42.59  Aligned_cols=126  Identities=14%  Similarity=0.094  Sum_probs=96.8

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      .+.||-+|+.|+-...+|.....-.           .|        .++ +.+...+.+++.+|..|. +.|..-+   |
T Consensus        12 ~~~Ln~~l~~E~~a~~~Y~~~a~~~-----------~~--------~~~-~~l~~~f~~~a~ee~~Ha-~~l~e~i~~lg   70 (149)
T 2qqy_A           12 IEGLNEDLAGEYSAIIMYNHNAATV-----------SG--------IYR-QVLKPFFESEISDEQGHA-LYLAEKIKTLG   70 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC-----------CS--------TTH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-----------cC--------CCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            6789999999999999998875311           01        112 468899999999999999 7776554   3


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHHh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGVE  194 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~VE  194 (310)
                      +.  |..++.                  +.....+....|..+.-.|.-.+..|.-.+..   ..++......-.|+..|
T Consensus        71 g~--p~~~~~------------------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee  130 (149)
T 2qqy_A           71 GT--PTTIPL------------------RVKQAEDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADE  130 (149)
T ss_dssp             CC--CCCCCC------------------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             Cc--cCCCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence            33  333322                  12234578889999999999999999988776   57888999999999999


Q ss_pred             hhhHHHHHHHHhh
Q 021580          195 SGQDAVIRTLLYE  207 (310)
Q Consensus       195 A~Haa~IRtlL~~  207 (310)
                      -.|.-+++.+|.+
T Consensus       131 e~h~~~l~~~l~~  143 (149)
T 2qqy_A          131 TNHMEELDRLLND  143 (149)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999998875

>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.83  E-value=0.17  Score=48.84  Aligned_cols=144  Identities=12%  Similarity=0.056  Sum_probs=105.2

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      +..||.|+.=|++..+.|.+-+..                       --|+.++.++++|..+++.|+ .-|+.-|. =.
T Consensus       212 v~~ln~a~~ge~~~~~a~e~~a~~-----------------------~~d~~~~~~~~~i~~~~~~h~-~~l~~~~~~~g  267 (365)
T 3fse_A          212 VRGLNTALGGERYSLEALEKYTEK-----------------------ESDVEAKALFQEMITNKQRHI-EYLETYLTRLG  267 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             hHHHHHHhhcChhHHHHHHHHHHh-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence            678999999999999999886521                       126899999999999999999 99998876 33


Q ss_pred             CCCcccccc-hhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhhhH
Q 021580          120 ARPQIDLSR-QNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESGQD  198 (310)
Q Consensus       120 ~rP~iDls~-~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~Ha  198 (310)
                      .+|..+-.. +.++++...         |.. .++...|.-++--|..|+.-+.=....++||..++..--|+.--+.|.
T Consensus       268 ~~~~~~~~~~~~~a~~~~~---------~~~-~~~~~~l~~al~~~~~gi~~~~~l~~~~~dp~~~~i~~~i~~~l~~~e  337 (365)
T 3fse_A          268 EKPSLSANIANQYAKVKTA---------LTG-SDDIYQIRSALGDIQTGIGDIGNLCAMYTDPIATAIFKEIYKDLVKYE  337 (365)
T ss_dssp             CCGGGSCC-------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCcCcchhHHHHHHHHH---------hcC-CChHHHHHHHhcchhhhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence            445543321 234443222         222 678889999999999999999999999999999999999999777777


Q ss_pred             HHHHHHHhhhhhcccCCCcc
Q 021580          199 AVIRTLLYERADQIVVPYKM  218 (310)
Q Consensus       199 a~IRtlL~~~~~~~v~Py~~  218 (310)
                      -.+-.+...|....+.|-..
T Consensus       338 ~~~~~l~~~~~~~~~~~~~~  357 (365)
T 3fse_A          338 QRLVSLYRTRTNATVQPPKP  357 (365)
T ss_dssp             HHHHHHHHHHHHHSCSSCCC
T ss_pred             HHHHHHHHhhccCCCCCCCC
Confidence            77776666666555666533

>3q4o_A Uncharacterized protein MJ0754; ferritin-like protein, four-helix bundle, metal binding, DIN center, unknown function; HET: B3P; 1.34A {Methanocaldococcus jannaschii} PDB: 3q4q_A* 3q4r_A* 3q4n_A

Probab=95.60  E-value=0.24  Score=44.27  Aligned_cols=159  Identities=16%  Similarity=0.152  Sum_probs=115.6

Q ss_pred             CCCCCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHH
Q 021580           34 GPIEANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIV  113 (310)
Q Consensus        34 ~~~~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~  113 (310)
                      ++.+..+.+-|-|++.=|||.-.+|......+|                           ...+..|+.-|+.|+ .+++
T Consensus        22 ~~Ls~~E~~~Ll~m~EEEklArdvY~~l~e~~g---------------------------~~~F~NIa~SEq~H~-dal~   73 (196)
T 3q4o_A           22 QPISEEEKEGLIEMREEEKLARDVYLTLYNKWK---------------------------LQIFKNIAESEQTHM-DAVK   73 (196)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHH-HHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------------------CchHHHHHHHHHHHH-HHHH
Confidence            344566888999999999999999988764332                           246888999999999 9999


Q ss_pred             Hhhc--CCCCCcccccchhhH-----HHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHH
Q 021580          114 TTVG--GFARPQIDLSRQNFA-----NIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSL  186 (310)
Q Consensus       114 ~aLg--av~rP~iDls~~~F~-----~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~a  186 (310)
                      ..+.  +++-|.-|...+.|+     ++-+......       -.+...=|.....+|.+-+.-|.-.....++++++.+
T Consensus        74 ~Ll~rYgl~~P~~~~~~G~f~~p~lq~LY~~L~e~G-------~~S~~dAl~vGa~iEe~dI~dl~~~l~~t~~~Di~~V  146 (196)
T 3q4o_A           74 YLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKG-------DKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFV  146 (196)
T ss_dssp             HHHHHTTCCCSCSCCSTTCCSSHHHHHHHHHHHHHH-------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCCCeeccHhHHHHHHHHHHHh-------hhhHHHHHHHHHHHHHhhHHHHHHHHhcCCcHHHHHH
Confidence            9998  888887544333443     1222221100       1355566677888999999999999999999999988


Q ss_pred             HHHHHHHhhhhHHHHHHHHhhhhhcccCCCcccHHHHHHHHH
Q 021580          187 VAGLLGVESGQDAVIRTLLYERADQIVVPYKMTVAEFTDRIS  228 (310)
Q Consensus       187 AA~Il~VEA~Haa~IRtlL~~~~~~~v~Py~~tV~~~t~~IS  228 (310)
                      =-.+...--.|-...+..|.+++. ...|--++-.||-.-|+
T Consensus       147 y~nL~~gS~nHLrAF~r~L~~~G~-~Y~pq~ls~~e~~~i~~  187 (196)
T 3q4o_A          147 YENLMKGSRNHMRAFVRMLNNYGS-NYTPQYISKEEYEEIIS  187 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTC-CCCCSSSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-CCCCccCCHHHHHHHHC
Confidence            888887766998776666765554 45677788777765543

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=95.39  E-value=0.28  Score=40.30  Aligned_cols=125  Identities=16%  Similarity=0.188  Sum_probs=93.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhh---hCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh-
Q 021580           41 KDLIQVALNLEFLETEFFLNGA---LGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV-  116 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~---~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL-  116 (310)
                      ++.||-+|+.|+--..-|..-.   .|.+                      + +.+...+.+++.+|..|+ +-|-.-+ 
T Consensus         8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~~~----------------------~-~~l~~~f~~~a~ee~~Ha-d~l~eri~   63 (161)
T 3gvy_A            8 IEYLNAALRSELTAVSQYWLHYRLQEDWG----------------------F-GSIAHKSRKESIEEMHHA-DKLIQRII   63 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------------------C-TTHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------------h-HHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            6789999999998777775322   2222                      2 246889999999999999 6666543 


Q ss_pred             --cCCCCCcc-cccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHH
Q 021580          117 --GGFARPQI-DLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGL  190 (310)
Q Consensus       117 --gav~rP~i-Dls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~I  190 (310)
                        |+.  |.+ ++.                  +.....+..+.|..+.-.|.-.+..|.-...   ...++.+....-.|
T Consensus        64 ~lGg~--p~~~~~~------------------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~  123 (161)
T 3gvy_A           64 FLGGH--PNLQRLN------------------PLRIGQTLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEEL  123 (161)
T ss_dssp             HTTCC--CCCSCCC------------------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHH
T ss_pred             HCCCC--CccCCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence              433  333 221                  1123468889999999999999999998554   46788899999999


Q ss_pred             HHHhhhhHHHHHHHHhhhh
Q 021580          191 LGVESGQDAVIRTLLYERA  209 (310)
Q Consensus       191 l~VEA~Haa~IRtlL~~~~  209 (310)
                      +..|-.|..+++..+..-.
T Consensus       124 ~~eEe~h~~~l~~~l~~i~  142 (161)
T 3gvy_A          124 IADEEGHIDYLETQIDLMG  142 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999877544

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=95.12  E-value=0.29  Score=41.13  Aligned_cols=131  Identities=8%  Similarity=0.026  Sum_probs=97.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      .+.||-+++.|+-...+|..-..-         +.          ..++ +.+...+.+++.+|..|. +.|..-+. --
T Consensus        13 ~~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~eE~~Ha-~~l~e~i~~lg   71 (179)
T 1nfv_A           13 IEVLNKARAMELHAIHQYMNQHYS---------LD----------DMDY-GELAANMKLIAIDEMRHA-ENFAERIKELG   71 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTB-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------cCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            689999999999999999876521         11          1122 578999999999999999 77766553 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHHhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~VEA~  196 (310)
                      .+|.+....             +  |+-+  .+....|..+.-.|.-.+..|.-.+..   ..|+......-.|+..|-.
T Consensus        72 g~p~~~~~~-------------~--~~~~--~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~  134 (179)
T 1nfv_A           72 GEPTTQKEG-------------K--VVTG--QAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQA  134 (179)
T ss_dssp             CCCCCCCSS-------------C--CCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CcCcCCCCC-------------c--CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence            123322110             0  1111  478889999999999999999987764   5788899999999999999


Q ss_pred             hHHHHHHHHhhhh
Q 021580          197 QDAVIRTLLYERA  209 (310)
Q Consensus       197 Haa~IRtlL~~~~  209 (310)
                      |.-+++.+|..-.
T Consensus       135 h~~~l~~~l~~l~  147 (179)
T 1nfv_A          135 HLTYYENIGSHIK  147 (179)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887644

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=94.88  E-value=0.51  Score=38.39  Aligned_cols=129  Identities=15%  Similarity=0.119  Sum_probs=96.2

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      .+.||-+|+.|+-....|.....-         +.          ..++ +.+...+.+++.+|..|. +.|..-+   |
T Consensus         8 ~~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~ee~~Ha-~~l~e~i~~lg   66 (161)
T 1jgc_A            8 IEFLNAALRSELTAISQYWVHFRL---------QE----------DWGL-AKMAKKSREESIEEMGHA-DKIIARILFLE   66 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------CCCc-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            688999999999999999877521         11          0122 467889999999999999 7666544   3


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc---CChhHHHHHHHHHHHh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL---VNCTSRSLVAGLLGVE  194 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l---~~~~~l~aAA~Il~VE  194 (310)
                      +.  |.+....             +  |+-+  .+....|..+.-.|.-.+..|.-.+...   .++......-.|+..|
T Consensus        67 g~--p~~~~~~-------------~--~~~~--~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee  127 (161)
T 1jgc_A           67 GH--PNLQKLD-------------P--LRIG--EGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDE  127 (161)
T ss_dssp             CC--CCCSCCC-------------C--CCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             CC--CcCCCCC-------------c--CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            32  3221100             0  1111  5788899999999999999999887766   7888899999999999


Q ss_pred             hhhHHHHHHHHhhhh
Q 021580          195 SGQDAVIRTLLYERA  209 (310)
Q Consensus       195 A~Haa~IRtlL~~~~  209 (310)
                      -.|..+++.+|..-.
T Consensus       128 ~~h~~~l~~~l~~l~  142 (161)
T 1jgc_A          128 EGHVDFLETQISLYD  142 (161)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887633

>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}

Probab=94.80  E-value=0.46  Score=39.81  Aligned_cols=142  Identities=13%  Similarity=-0.015  Sum_probs=97.7

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      ...++.||=.|..+|=-.++|..++...                       -++.++.++.+++.++..|+ .-|+..|.
T Consensus        10 ~~~i~~Ln~Li~~~~D~~~gY~~aae~~-----------------------~d~~lk~~f~~~a~~~~~~~-~eL~~~i~   65 (153)
T 4etr_A           10 DDTLDVLNDLLQTSKDGEAGFHACAEDL-----------------------RDPQLKAAMLEQSRDCAAAA-DELERIVL   65 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHC-----------------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            3568999999999999999999997421                       25789999999999999999 99998875


Q ss_pred             -CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhh
Q 021580          118 -GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       118 -av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~  196 (310)
                       --..|..  + ++|...+..+.- .+.--|.. .++...|.....=|+..+.+|.-+...--.++++.+...++..+-.
T Consensus        66 ~lGg~p~~--~-~s~~g~~hr~~~-~lks~~~~-~~~~~iL~~~~~gE~~~~~~Y~~al~~~lp~~~r~ll~~q~~~~~~  140 (153)
T 4etr_A           66 ELGGKPKD--S-TSFAGDLHRRWV-DLKSLVTG-KDEEAVLNECERGEDVAKHRYQAALEKSLPAEIHQVIERQYQGVLR  140 (153)
T ss_dssp             HTTCCC------------------------------CHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCC--C-CcHHHHHHHHHH-HHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence             1123431  2 233333222210 01111222 3567899999999999999999998755677889999999999989


Q ss_pred             hHHHHHHHHhhh
Q 021580          197 QDAVIRTLLYER  208 (310)
Q Consensus       197 Haa~IRtlL~~~  208 (310)
                      |..+|+.+-.+|
T Consensus       141 ~~d~~~~Lr~~~  152 (153)
T 4etr_A          141 HHDRVRALRDAR  152 (153)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHhhcc
Confidence            999988876543

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=94.78  E-value=0.48  Score=38.57  Aligned_cols=130  Identities=14%  Similarity=0.078  Sum_probs=95.0

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||=+|+.|+--..-|..-..-         +.          ..++ +.+...+.+.+.+|..|. +-|-.-+. --
T Consensus         8 ~~~Ln~~la~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~ee~~ha-d~l~eri~~lG   66 (154)
T 3r2k_A            8 IDYLNTLLTGELAARDQYFIHSRM---------YE----------DWGF-SKLYERLNHEMEEETQHA-DALLRRILLLE   66 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------cCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            678999999999877777654310         00          0112 467889999999999999 66665432 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc---CChhHHHHHHHHHHH-hh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL---VNCTSRSLVAGLLGV-ES  195 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l---~~~~~l~aAA~Il~V-EA  195 (310)
                      .+|.+++.                  +.....+....|..+.-.|.-.+..|.......   .|+......-.|+.. |-
T Consensus        67 g~p~~~~~------------------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee  128 (154)
T 3r2k_A           67 GTPRMRPD------------------DIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEE  128 (154)
T ss_dssp             CCCCCCCC------------------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence            23444432                  122345788889999999999999999887764   688899999999999 99


Q ss_pred             hhHHHHHHHHhhhh
Q 021580          196 GQDAVIRTLLYERA  209 (310)
Q Consensus       196 ~Haa~IRtlL~~~~  209 (310)
                      .|..+++..|..-.
T Consensus       129 ~h~~~l~~~l~~i~  142 (154)
T 3r2k_A          129 DHAYWLEQQLGLIA  142 (154)
T ss_dssp             THHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999887543

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=94.37  E-value=0.83  Score=36.66  Aligned_cols=126  Identities=17%  Similarity=0.155  Sum_probs=94.9

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      ++.||-+|+.|+-....|.....-         +.          ..++ +.+...+.+.+.+|..|. +.|..-+   |
T Consensus         8 ~~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~eE~~Ha-~~l~e~i~~lg   66 (155)
T 2fkz_A            8 IQHLNKILGNELIAINQYFLHARM---------YE----------DWGL-EKLGKHEYHESIDEMKHA-DKLIKRILFLE   66 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------hCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            688999999999999999876521         11          0122 457888999999999999 7666554   3


Q ss_pred             CCCCCccc-ccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc---CChhHHHHHHHHHHH
Q 021580          118 GFARPQID-LSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL---VNCTSRSLVAGLLGV  193 (310)
Q Consensus       118 av~rP~iD-ls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l---~~~~~l~aAA~Il~V  193 (310)
                      +.  |... +.                  +...-.+....|..+.-.|.-.+..|.-.....   .++......-.|+..
T Consensus        67 g~--p~~~~~~------------------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e  126 (155)
T 2fkz_A           67 GL--PNLQELG------------------KLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILES  126 (155)
T ss_dssp             CC--CCCSCCC------------------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CC--CCCCCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            33  3321 11                  111124788899999999999999999887766   688888999999999


Q ss_pred             hhhhHHHHHHHHhh
Q 021580          194 ESGQDAVIRTLLYE  207 (310)
Q Consensus       194 EA~Haa~IRtlL~~  207 (310)
                      |-.|..+++..+..
T Consensus       127 ee~h~~~l~~~l~~  140 (155)
T 2fkz_A          127 EEDHIDWLETQLDL  140 (155)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998865

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=94.30  E-value=0.89  Score=37.16  Aligned_cols=128  Identities=15%  Similarity=0.116  Sum_probs=93.2

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHh---hc
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTT---VG  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~a---Lg  117 (310)
                      ++.||-+|+.|+--..-|..-..-         +.          ..++ +.+...+.+++.+|..|. +-|-.-   +|
T Consensus        10 ~~~Ln~~la~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~ee~~Ha-d~l~e~i~~lG   68 (161)
T 3uoi_A           10 LRLLNEQLTSELTAINQYFLHSKM---------QD----------NWGF-TELAAHTRAESFDEMRHA-EEITDRILLLD   68 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------hCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            688999999998887777643310         00          0112 467899999999999999 666554   34


Q ss_pred             CCCCCcc-cccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHH
Q 021580          118 GFARPQI-DLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGV  193 (310)
Q Consensus       118 av~rP~i-Dls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~V  193 (310)
                      +.  |.+ ++.              +  |+.+  .+....|..+.-.|.-.+..|.....   ...++.+....-.|+..
T Consensus        69 g~--p~~~~~~--------------~--~~~~--~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~e  128 (161)
T 3uoi_A           69 GL--PNYQRIG--------------S--LRIG--QTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVAD  128 (161)
T ss_dssp             CC--CCCSCCC--------------C--CCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CC--CcCCCCC--------------C--CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            43  322 111              0  1222  67888999999999999999998854   45688899999999999


Q ss_pred             hhhhHHHHHHHHhhhh
Q 021580          194 ESGQDAVIRTLLYERA  209 (310)
Q Consensus       194 EA~Haa~IRtlL~~~~  209 (310)
                      |-.|.-+++..|..-.
T Consensus       129 ee~h~~~l~~~l~~i~  144 (161)
T 3uoi_A          129 EEEHIDYLETQLELMD  144 (161)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999887644

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=94.18  E-value=0.65  Score=37.60  Aligned_cols=127  Identities=16%  Similarity=0.168  Sum_probs=96.1

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      .+.||-+++.|+-...+|..-..-         +.          ..++ +.+...+.+.+.+|..|. +.|..-+   |
T Consensus         8 ~~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~ee~~Ha-~~l~e~i~~lg   66 (158)
T 2y3q_A            8 INYLNKLLGNELVAINQYFLHARM---------FK----------NWGL-KRLNDVEYHESIDEMKHA-DRYIERILFLE   66 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------hcCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            688999999999999999876521         11          1123 468999999999999999 7766554   3


Q ss_pred             CCCCCccc-ccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc---CChhHHHHHHHHHHH
Q 021580          118 GFARPQID-LSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL---VNCTSRSLVAGLLGV  193 (310)
Q Consensus       118 av~rP~iD-ls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l---~~~~~l~aAA~Il~V  193 (310)
                      +.  |.+. +.              +  |+-+  .+....|..+.-.|.-.+..|.-.+...   .++......-.|+..
T Consensus        67 g~--p~~~~~~--------------~--~~~~--~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~e  126 (158)
T 2y3q_A           67 GL--PNLQDLG--------------K--LNIG--EDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRD  126 (158)
T ss_dssp             CC--CCCSCCC--------------C--CCCC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CC--CcCCCCC--------------c--CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            33  3221 11              0  1122  5788899999999999999999887764   788889999999999


Q ss_pred             hhhhHHHHHHHHhhh
Q 021580          194 ESGQDAVIRTLLYER  208 (310)
Q Consensus       194 EA~Haa~IRtlL~~~  208 (310)
                      |-.|..+++..+..-
T Consensus       127 e~~h~~~l~~~l~~l  141 (158)
T 2y3q_A          127 EEGHIDWLETELDLI  141 (158)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988653

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=93.78  E-value=0.99  Score=37.43  Aligned_cols=131  Identities=12%  Similarity=0.102  Sum_probs=94.6

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh--c
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV--G  117 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL--g  117 (310)
                      =++.||=+|+.|+--..-|..-+.=         +.          ..++ +.+...+.+.+.+|..|..++++..+  |
T Consensus         7 vi~~LN~~l~~El~A~~~Y~~~a~~---------~~----------~~g~-~~~a~~f~~~a~eE~~HA~~l~~~i~~lG   66 (159)
T 4am5_A            7 VIEYLNRGLRSELTAVSQYWLHYRM---------LE----------DWGY-KDLAKKWRAESIEEMAHADKFVERILFLE   66 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------cCCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3788999999999888777654310         00          1122 45788899999999999944444433  3


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVE  194 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VE  194 (310)
                      +.|  .+  +              ++. +-..+.+..+.+..+.-.|.-.+..|.-...   ...++.+....-.|+..|
T Consensus        67 G~p--~~--~--------------~~~-~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~il~eE  127 (159)
T 4am5_A           67 GLP--NL--Q--------------TLD-PLRIGQTVKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEELMGDE  127 (159)
T ss_dssp             CCC--CC--S--------------BCC-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             CCC--cc--c--------------ccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence            433  22  1              111 2234678999999999999999999987665   456788888889999999


Q ss_pred             hhhHHHHHHHHhhhh
Q 021580          195 SGQDAVIRTLLYERA  209 (310)
Q Consensus       195 A~Haa~IRtlL~~~~  209 (310)
                      -.|..++++.|..-.
T Consensus       128 eeH~~~l~~~L~~i~  142 (159)
T 4am5_A          128 EHHIDFLETQLDLVS  142 (159)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887644

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=93.78  E-value=0.83  Score=38.00  Aligned_cols=129  Identities=15%  Similarity=0.104  Sum_probs=95.7

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      .+.||-+++.|+-...+|..-..-         +.          ..++ +.+...+.+++.+|..|. +.|..-+   |
T Consensus        10 ~~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~eE~~Ha-~~l~e~i~~lg   68 (174)
T 3qb9_A           10 LRLLNEQLTSELTAINQYFLHSKM---------QD----------NWGF-TELAAHTRAESFDEMRHA-EEITDRILLLD   68 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------CCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHCC
Confidence            688999999999999988876421         11          1223 468999999999999999 7665554   3


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVE  194 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VE  194 (310)
                      +.  |.+..                + ++.....+....|..+.-.|.-.+..|.-.+.   ...++......-.|+..|
T Consensus        69 g~--p~~~~----------------i-~~~~~~~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eE  129 (174)
T 3qb9_A           69 GL--PNYQR----------------I-GSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADE  129 (174)
T ss_dssp             CC--CCCSC----------------C-CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             Cc--ccccC----------------C-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence            32  32211                0 01222467888999999999999999998874   446888888888999999


Q ss_pred             hhhHHHHHHHHhhhh
Q 021580          195 SGQDAVIRTLLYERA  209 (310)
Q Consensus       195 A~Haa~IRtlL~~~~  209 (310)
                      -.|..+++..+..-.
T Consensus       130 e~h~~~l~~~l~~i~  144 (174)
T 3qb9_A          130 EEHIDYLETQLELMD  144 (174)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999998887543

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=93.32  E-value=0.19  Score=42.25  Aligned_cols=60  Identities=20%  Similarity=0.264  Sum_probs=50.9

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGG  118 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLga  118 (310)
                      ++.++|..|+..|.--..||...+..                       .-|+.+++++.+|+.+|..|. +.|++.+..
T Consensus        93 ~~~~~l~~A~~~E~~a~~fY~~~a~~-----------------------~~d~~~k~~~~~la~eE~~H~-~~l~~~~~~  148 (167)
T 2oh3_A           93 TPYHALRYARDNEIRGMEYYKEAAAN-----------------------SADPEVKRLGADFAAEEAEHV-VALDKWIEK  148 (167)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            57899999999999999999998621                       136899999999999999999 999988775


Q ss_pred             CCCC
Q 021580          119 FARP  122 (310)
Q Consensus       119 v~rP  122 (310)
                      +.+|
T Consensus       149 ~~~~  152 (167)
T 2oh3_A          149 TPRP  152 (167)
T ss_dssp             SCCC
T ss_pred             ccCc
Confidence            5544

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=92.06  E-value=1.5  Score=35.97  Aligned_cols=126  Identities=11%  Similarity=0.055  Sum_probs=92.3

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcC-
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGG-  118 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLga-  118 (310)
                      =.+.||=+++.|.-....|..-+.-                   +++-++ +.+...+.+.+.+|..|. .-+-+-|.. 
T Consensus         9 ~~~~Ln~a~~~E~~A~~~Y~~~A~~-------------------a~~~g~-~~~a~~f~~~A~eE~~HA-~~~~~~l~~~   67 (144)
T 1j30_A            9 TAENLKQGFIGESMANRRYLYFAKR-------------------ADEEGY-PEIAGLLRSIAEGETAHA-FGHLDFIRQG   67 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHhhc
Confidence            4678999999999999988776421                   011223 568899999999999999 555444431 


Q ss_pred             -CCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchh-Hhhhccccc---ccCChhHHHHHHHHHHH
Q 021580          119 -FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVG-LVGYVGTIP---NLVNCTSRSLVAGLLGV  193 (310)
Q Consensus       119 -v~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VG-vtAY~Gaap---~l~~~~~l~aAA~Il~V  193 (310)
                       ...|.++                      .|+.|....|..+.-.|.-- ...|.-.+.   .-.++.+....-.|+..
T Consensus        68 ~lg~p~~~----------------------~p~~~~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~  125 (144)
T 1j30_A           68 GLTDPATD----------------------KPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARA  125 (144)
T ss_dssp             TCBCTTTS----------------------CBCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCcC----------------------CCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence             2224211                      13578888899999999888 577775544   45567888888899999


Q ss_pred             hhhhHHHHHHHHhhh
Q 021580          194 ESGQDAVIRTLLYER  208 (310)
Q Consensus       194 EA~Haa~IRtlL~~~  208 (310)
                      |..|..+++.+|..-
T Consensus       126 E~~H~~~~~~~l~~i  140 (144)
T 1j30_A          126 EKSHAEKFQNVLKQL  140 (144)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998753

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=91.72  E-value=0.51  Score=39.27  Aligned_cols=56  Identities=16%  Similarity=0.242  Sum_probs=47.7

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      ..++.++|..|+..|.--..||...+..                       .-++.+++++.+|+.+|..|. +.|++.+
T Consensus        98 ~~~~~~~l~~ai~~E~~a~~~Y~~~a~~-----------------------~~d~~~k~l~~~la~eE~~H~-~~l~~~~  153 (157)
T 1vjx_A           98 DLTLKEVLDIAISVEKDSIILYYELKDG-----------------------LVNSDAQKTVKKIIDQEKEHL-RKLLEMK  153 (157)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCSHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            3468899999999999999999998732                       126899999999999999999 8888754

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=91.57  E-value=1.6  Score=37.04  Aligned_cols=131  Identities=18%  Similarity=0.091  Sum_probs=94.4

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-C
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-G  118 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-a  118 (310)
                      =++.||-+|+.|+--..-|..-..-         +.          ..+| +.+...+.+.+.+|..|. +-|-.-+. -
T Consensus        28 ~~~~LN~~la~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~eE~~Ha-d~laeri~~l   86 (182)
T 3fvb_A           28 VIERLNEALFLELGAVNQYWLHYRL---------LN----------DWGY-TRLAKKEREESIEEMHHA-DKLIDRIIFL   86 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HHTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---------HH----------CCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHC
Confidence            4688999999998887777654310         00          0112 467899999999999999 66665432 1


Q ss_pred             CCCCcc-cccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHh
Q 021580          119 FARPQI-DLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVE  194 (310)
Q Consensus       119 v~rP~i-Dls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VE  194 (310)
                      -.+|.+ ++..                |+.  -.+..+.|..+.-.|.-.+..|.-...   ...|+.+....-.|+..|
T Consensus        87 Gg~p~~~~~~~----------------~~~--~~~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eE  148 (182)
T 3fvb_A           87 EGFPNLQTVSP----------------LRI--GQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADE  148 (182)
T ss_dssp             TCCCCCSBCCC----------------CCC--CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCC----------------CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence            123333 2211                122  268888999999999999999998654   467888999999999999


Q ss_pred             hhhHHHHHHHHhhhh
Q 021580          195 SGQDAVIRTLLYERA  209 (310)
Q Consensus       195 A~Haa~IRtlL~~~~  209 (310)
                      -.|..+++..|..-.
T Consensus       149 e~h~~~l~~~l~~i~  163 (182)
T 3fvb_A          149 EGHIDFLETQLDLLA  163 (182)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887644

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=89.18  E-value=0.94  Score=38.00  Aligned_cols=55  Identities=22%  Similarity=0.262  Sum_probs=47.1

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      ++.++|..|+..|.--.+||...+.-                      + -|+.+++++.+|+.+|..|. +.|++.+.
T Consensus       105 ~~~~~L~~ai~~E~~a~~~Y~~~a~~----------------------~-~d~~~r~l~~~ia~eE~~H~-~~l~~~l~  159 (175)
T 2fzf_A          105 DIIDLIRWAMKAEEIAAEFYLKLEEM----------------------V-KEEEKKRLMRYLADMERGHY-YTLRAEYE  159 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHT----------------------S-CSHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhh----------------------C-CCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            46899999999999988999998731                      1 26899999999999999999 99988664

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=87.94  E-value=9.7  Score=30.94  Aligned_cols=136  Identities=21%  Similarity=0.252  Sum_probs=94.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh---c
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV---G  117 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL---g  117 (310)
                      .+.||-+|+.|+-....|.....-.          . |        .++ ..+...+.+.+.+|..|. +.|-.-+   |
T Consensus        19 ~~~Ln~~l~~E~~a~~~Y~~~a~~~----------~-~--------~~~-~~l~~~f~~~a~ee~~Ha-d~lae~i~~lG   77 (170)
T 2vzb_A           19 IDQLNAALSEEWLAYYQYWVGALVV----------E-G--------AMR-ADVQGEFEEHAEEERHHA-QLIADRIIELE   77 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC----------B-S--------TTH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh----------c-C--------CCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            6789999999999999998775311          0 1        112 357888999999999999 6665544   3


Q ss_pred             CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccC--ChhHHHHHHHHHHHhh
Q 021580          118 GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLV--NCTSRSLVAGLLGVES  195 (310)
Q Consensus       118 av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~--~~~~l~aAA~Il~VEA  195 (310)
                      +  +|....  ..|.   +.+. .+..|+-+ + +....|..+.-.|.-.+..|.-.+....  |+......-.|+..|-
T Consensus        78 g--~p~~~~--~~~~---~~~~-~~~~~~~~-~-~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~D~~t~~~l~~~~~ee~  147 (170)
T 2vzb_A           78 G--VPVLDP--KKWF---ELAR-CKYDSPTA-F-DSVSLLNQNVSSERCAILRYQEIANFTNGKDYTTCDIAKHILAEEE  147 (170)
T ss_dssp             C--CCCCCG--GGHH---HHCS-SCCCCCCS-C-BHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred             C--ccCCCH--HHHH---Hhhc-CCCCCCCC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence            3  343322  1222   1110 11011211 2 5788889999999999999998876654  6677888889999999


Q ss_pred             hhHHHHHHHHhh
Q 021580          196 GQDAVIRTLLYE  207 (310)
Q Consensus       196 ~Haa~IRtlL~~  207 (310)
                      .|..+++.++..
T Consensus       148 ~h~~~l~~~l~~  159 (170)
T 2vzb_A          148 EHEQDLQDYLTD  159 (170)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998865

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=82.42  E-value=20  Score=29.81  Aligned_cols=124  Identities=13%  Similarity=0.059  Sum_probs=88.9

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcCCC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGGFA  120 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLgav~  120 (310)
                      .+-|+=|+.-|.-+..-|+.-+.          .         +++-++ +.+.+++++++.+|..|. +.+-..|+.+.
T Consensus        14 ~~nL~~afagEs~A~~~Y~~~A~----------~---------A~~eG~-~~iA~~F~~~A~~E~~HA-~~~~~~L~~~~   72 (144)
T 4di0_A           14 EENLKYAFAGESQANRRYLYFAS----------K---------ADVEGQ-NDIAALFRSTAEGETGHA-HGHLEYLEAVG   72 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH----------H---------HHHHTC-HHHHHHHHHHHHHHHHHH-HHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH----------H---------HHHCCh-HHHHHHHHHHHHHHHHHH-HHHHHHHhhcC
Confidence            67899999999999988876541          0         112333 579999999999999999 66666676544


Q ss_pred             CCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhH-hhhcccccc---cCChhHHHHHHHHHHHhhh
Q 021580          121 RPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGL-VGYVGTIPN---LVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       121 rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGv-tAY~Gaap~---l~~~~~l~aAA~Il~VEA~  196 (310)
                      .|...                     + |..+...-|..+.-=|.--. .-|...+..   -..+.+...--.|.-+|.+
T Consensus        73 ~p~~~---------------------~-~~~~T~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~  130 (144)
T 4di0_A           73 DPATG---------------------L-PFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERS  130 (144)
T ss_dssp             CTTTS---------------------C-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CcccC---------------------C-CCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHH
Confidence            44211                     1 34566677777777777775 467554433   4567778888899999999


Q ss_pred             hHHHHHHHHhh
Q 021580          197 QDAVIRTLLYE  207 (310)
Q Consensus       197 Haa~IRtlL~~  207 (310)
                      |+.+.+.+|..
T Consensus       131 Ha~~~~~~l~~  141 (144)
T 4di0_A          131 HANRYTKALDG  141 (144)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHhh
Confidence            99999988864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	310
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	99.73
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	98.57
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	98.55
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	98.44
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	96.44
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	96.09
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	95.8
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	95.39
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	95.24
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	94.89
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	93.96
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	93.88
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	91.93
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	90.39
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	87.76

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.73  E-value=6.3e-18  Score=139.72  Aligned_cols=132  Identities=12%  Similarity=0.082  Sum_probs=108.8

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .+|.++||+||.+||  +.+|.+++..                      +.+++.+++++++++.||..|+ ++|++.+.
T Consensus         4 ~~d~~~L~~AL~~E~--aaiy~Y~~a~----------------------~~~~~~~~~~~~~~~~~e~~H~-~~L~~~i~   58 (142)
T d2ib0a1           4 SADNAALCDALAVEH--ATIYGYGIVS----------------------ALSPPGVNFLVADALKQHRHRR-DDVIVMLS   58 (142)
T ss_dssp             HHHHHHHHHHHHHHH--HHHHHHHHHH----------------------HHSCGGGHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             chHHHHHHHHHHHHH--HHHHHHHHHh----------------------ccCCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            359999999999999  5588886521                      2346788999999999999999 99998886


Q ss_pred             -CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhh
Q 021580          118 -GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       118 -av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~  196 (310)
                       ....|.....            ++.+   -+++.|..++|..+..+|..++.+|.+++..++|+++++++++|+++|++
T Consensus        59 ~lgg~p~~~~~------------~~~~---~~~~td~~~~l~~a~~~E~~a~~~Y~~~~~~~~d~~~r~la~~il~~ea~  123 (142)
T d2ib0a1          59 ARGVTAPIAAA------------GYQL---PMQVSSAADAARLAVRMENDGATAWRAVVEHAETADDRVFASTALTESAV  123 (142)
T ss_dssp             HTTCCCCCCCS------------SCCC---SSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCcccc------------cccc---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence             2233332211            1211   23678999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhhh
Q 021580          197 QDAVIRTLLYERA  209 (310)
Q Consensus       197 Haa~IRtlL~~~~  209 (310)
                      |++++|..+....
T Consensus       124 ha~~~r~~~~~~p  136 (142)
T d2ib0a1         124 MATRWNRVLGAWP  136 (142)
T ss_dssp             HHHHHHHHHHHSC
T ss_pred             HHHHHHHhcCCCC
Confidence            9999999998765

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.57  E-value=6.5e-08  Score=77.51  Aligned_cols=137  Identities=11%  Similarity=0.013  Sum_probs=102.6

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc--
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG--  117 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg--  117 (310)
                      =.++|++|+..|+....||...+...                       -++.+++++.+++.+|..|. +.+...+.  
T Consensus        12 l~e~l~~ai~~E~~a~~~Y~~~a~~~-----------------------~~~~~~~~f~~la~eE~~H~-~~~~~~~~~~   67 (158)
T d2fzfa1          12 LEELLGMAIKAEIGAREFYKSLAEKI-----------------------KIEALKEKINWLAEEEKKHE-ALLRKLYSQM   67 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSC-----------------------CCTTHHHHHHHHHHHTHHHH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------CChhHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence            36789999999999999999876321                       14568999999999999999 99988875  


Q ss_pred             -CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhh
Q 021580          118 -GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       118 -av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~  196 (310)
                       +-+.|.....  .....     .........+..+....|..+...|..++..|...+..+.|+..+++.-.|...|.+
T Consensus        68 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~l~~a~~~E~~a~~~Y~~la~~~~d~~~~~l~~~i~~~E~~  140 (158)
T d2fzfa1          68 FPGKEVVFPKE--HIGPE-----LQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMVKEEEKKRLMRYLADMERG  140 (158)
T ss_dssp             STTCCCCCCSC--CBSCC-----CCCCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHHHH
T ss_pred             CCCccccchhh--hhhhh-----hhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence             2222211110  00000     000001233345577789999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhh
Q 021580          197 QDAVIRTLLYE  207 (310)
Q Consensus       197 Haa~IRtlL~~  207 (310)
                      |..+++.++..
T Consensus       141 H~~~l~~~~d~  151 (158)
T d2fzfa1         141 HYYTLRAEYEL  151 (158)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999987654

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=98.55  E-value=1.8e-07  Score=74.78  Aligned_cols=143  Identities=13%  Similarity=0.032  Sum_probs=106.3

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGG  118 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLga  118 (310)
                      |-.++||.|+.+|.....||...+.-         +.           ..-.+.+++++.+++.+|..|. +.|.+.+..
T Consensus         2 t~~e~L~~Ai~~E~~a~~~Y~~~a~~---------~~-----------~~~~~~~~~~f~~la~eE~~H~-~~l~~~~~~   60 (152)
T d2oh3a1           2 TLAEFLAHAIALETEAAERYVELADM---------ME-----------AHNNLDTATVFRDMARFSTLHG-DEIKQRSRA   60 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHH---------HH-----------HTTCHHHHHHHHHHHHHHHHHH-HHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHH---------Hh-----------hcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence            56799999999999999999876521         00           0113678999999999999999 999988773


Q ss_pred             CCCCcccccch--hhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhh
Q 021580          119 FARPQIDLSRQ--NFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       119 v~rP~iDls~~--~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~  196 (310)
                      ...|..+....  .|..      -.......+...|....|..|...|..++.-|...+..+.|++++.+...|...|.+
T Consensus        61 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~~~~d~~~r~~~~~l~~~E~~  134 (152)
T d2oh3a1          61 LELPKLMSWQYRWKTPP------EVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEVKRLGADFAAEEAE  134 (152)
T ss_dssp             SCCCCCCGGGTSCCCCC------CSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcchhhhccccch------hHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            22222111110  0000      001111244456788999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhh
Q 021580          197 QDAVIRTLLYER  208 (310)
Q Consensus       197 Haa~IRtlL~~~  208 (310)
                      |..+++.++.+-
T Consensus       135 H~~~l~~~l~~~  146 (152)
T d2oh3a1         135 HVVALDKWIEKT  146 (152)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhc
Confidence            999999988764

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=98.44  E-value=3.2e-07  Score=73.31  Aligned_cols=140  Identities=14%  Similarity=0.060  Sum_probs=103.5

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-  117 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-  117 (310)
                      +-.|+|++|+.+|.....||...+.                        ..++.+++++.+++.+|..|. +.|++.+. 
T Consensus         6 ~~~e~l~~Ai~~E~~~~~~Y~~~a~------------------------~~~~~~~~~f~~la~eE~~H~-~~l~~~~~~   60 (149)
T d1vjxa_           6 KVSDILTVAIRLEEEGERFYRELSE------------------------HFNGEIKKTFLELADQERIHA-EIFRKMSDQ   60 (149)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHTT------------------------SCCSHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHH------------------------hCCHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            3468999999999999999998751                        124568999999999999999 99998876 


Q ss_pred             CCCCC-cccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccccCChhHHHHHHHHHHHhhh
Q 021580          118 GFARP-QIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       118 av~rP-~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l~~~~~l~aAA~Il~VEA~  196 (310)
                      -.+.| .-.+........    .-........+..+....|..|..+|..+..-|...+..+.++..+...-.|...|.+
T Consensus        61 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~l~~~~~d~~~r~~~~~i~~eE~~  136 (149)
T d1vjxa_          61 ENWDEVDSYLAGYAFYEV----FPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYELKDGLVNSDAQKTVKKIIDQEKE  136 (149)
T ss_dssp             SCHHHHTCBCCSBCCCCC----CCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred             hCCCcchHHHHHHhhhhh----hhhhHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence            11111 000000000000    0000001234556788899999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHhh
Q 021580          197 QDAVIRTLLYE  207 (310)
Q Consensus       197 Haa~IRtlL~~  207 (310)
                      |...++.+..+
T Consensus       137 H~~~l~~l~~~  147 (149)
T d1vjxa_         137 HLRKLLEMKRE  147 (149)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999987754

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=96.44  E-value=0.0033  Score=49.06  Aligned_cols=63  Identities=21%  Similarity=0.270  Sum_probs=54.6

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .++.++|+.|+-.|.--..||...+..                       .-|+.+++++.+|+.+|..|+ +.|+..+.
T Consensus        89 ~~~~~~l~~Al~~E~~a~~~Y~~~a~~-----------------------~~d~~~r~~~~~l~~~E~~H~-~~l~~~l~  144 (152)
T d2oh3a1          89 MTPYHALRYARDNEIRGMEYYKEAAAN-----------------------SADPEVKRLGADFAAEEAEHV-VALDKWIE  144 (152)
T ss_dssp             GSHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            367899999999999999999998621                       126889999999999999999 99999999


Q ss_pred             CCCCCcc
Q 021580          118 GFARPQI  124 (310)
Q Consensus       118 av~rP~i  124 (310)
                      -+++|.+
T Consensus       145 ~~~~p~~  151 (152)
T d2oh3a1         145 KTPRPSI  151 (152)
T ss_dssp             HSCCCCC
T ss_pred             hcCCCCC
Confidence            8888864

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=96.09  E-value=0.028  Score=45.38  Aligned_cols=131  Identities=7%  Similarity=0.014  Sum_probs=96.1

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||=+|+.|+--...|..-..-         +.          ..++ +.+.+.+++.+..|..|. ..|-.-+. --
T Consensus        10 i~~Ln~~l~~E~~a~~~Y~~~a~~---------~~----------~~~~-~~l~~~f~~~a~eE~~Ha-~~l~eri~~lG   68 (169)
T d1nf4a_          10 IEVLNKARAMELHAIHQYMNQHYS---------LD----------DMDY-GELAANMKLIAIDEMRHA-ENFAERIKELG   68 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---------HH----------HHTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---------Hh----------ccCc-HHHHHHHHHHHHHHHHHH-HHHHHHHHccC
Confidence            689999999999988888775421         00          0112 468899999999999999 66655443 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHHhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~VEA~  196 (310)
                      ..|.+...                . +.....+..+.|..+.-.|.-.+..|...+..   ..|+......-.|+..|-.
T Consensus        69 g~p~~~~~----------------~-~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~l~~il~eE~~  131 (169)
T d1nf4a_          69 GEPTTQKE----------------G-KVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQA  131 (169)
T ss_dssp             CCCCCCCS----------------S-CCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCccccc----------------c-cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            23332221                1 11234678899999999999999999877654   4588899999999999999


Q ss_pred             hHHHHHHHHhhhh
Q 021580          197 QDAVIRTLLYERA  209 (310)
Q Consensus       197 Haa~IRtlL~~~~  209 (310)
                      |..++..+|....
T Consensus       132 H~~~~e~~l~~i~  144 (169)
T d1nf4a_         132 HLTYYENIGSHIK  144 (169)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999888643

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.80  E-value=0.057  Score=42.52  Aligned_cols=130  Identities=15%  Similarity=0.087  Sum_probs=96.1

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      ++.||=+|+.|+-...-|..-+.-.         .          ..++ +.+.+.+++.+.+|..|. .-|...+. --
T Consensus         8 i~~Ln~~l~~E~~A~~~Y~~~a~~~---------~----------~~~~-~~la~~f~~~a~eE~~Ha-~~l~~~i~~lG   66 (154)
T d2fkza1           8 IQHLNKILGNELIAINQYFLHARMY---------E----------DWGL-EKLGKHEYHESIDEMKHA-DKLIKRILFLE   66 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH---------H----------HTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---------H----------HcCh-HHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence            7899999999999999888865310         0          1112 467888999999999999 66665443 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VEA~  196 (310)
                      .+|.++-                +. +...+.+....+..+.-.|......|.-...   ...|+......-.|+..|-.
T Consensus        67 g~p~~~~----------------~~-~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~il~eE~~  129 (154)
T d2fkza1          67 GLPNLQE----------------LG-KLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEED  129 (154)
T ss_dssp             CCCCCSC----------------CC-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             CCccccc----------------cc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            2233221                11 2345678999999999999999988885554   46788889999999999999


Q ss_pred             hHHHHHHHHhhh
Q 021580          197 QDAVIRTLLYER  208 (310)
Q Consensus       197 Haa~IRtlL~~~  208 (310)
                      |..++++.|..-
T Consensus       130 h~~~l~~~L~~~  141 (154)
T d2fkza1         130 HIDWLETQLDLI  141 (154)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988753

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.39  E-value=0.06  Score=42.22  Aligned_cols=60  Identities=7%  Similarity=-0.076  Sum_probs=51.7

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVGG  118 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLga  118 (310)
                      ++.++|.+++.+|-.-..+|...+..                       --|+.++..+.+|..+|..|- ..+|..+|.
T Consensus        79 d~~~~l~~a~~~E~~a~~~Y~~~~~~-----------------------~~d~~~r~la~~il~~ea~ha-~~~r~~~~~  134 (142)
T d2ib0a1          79 SAADAARLAVRMENDGATAWRAVVEH-----------------------AETADDRVFASTALTESAVMA-TRWNRVLGA  134 (142)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCSHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cCCHHHHHHHHHHHHHHHHHH-HHHHHhcCC
Confidence            57889999999999999999998731                       136889999999999999999 999999995


Q ss_pred             CCCC
Q 021580          119 FARP  122 (310)
Q Consensus       119 v~rP  122 (310)
                      .|-|
T Consensus       135 ~p~~  138 (142)
T d2ib0a1         135 WPIT  138 (142)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            5543

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=95.24  E-value=0.13  Score=40.59  Aligned_cols=129  Identities=13%  Similarity=0.088  Sum_probs=96.0

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc--
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG--  117 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg--  117 (310)
                      =++.||=+++.|+--...|+....=          .         +..++ ..+...+.+.+.+|..|. .-|-.-|.  
T Consensus         7 ii~~Ln~~l~~E~~A~~~Y~~~a~~----------~---------~~~~~-~~la~~f~~~a~eE~~Ha-~~l~eri~~l   65 (158)
T d2htna1           7 VINYLNKLLGNELVAINQYFLHARM----------F---------KNWGL-KRLNDVEYHESIDEMKHA-DRYIERILFL   65 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH----------H---------HHTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----------H---------HcCCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence            3789999999999999999876521          1         01223 467788999999999999 66665543  


Q ss_pred             -CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHH
Q 021580          118 -GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGV  193 (310)
Q Consensus       118 -av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~V  193 (310)
                       +.|  .++..                 ++...+.+....|..+.-.|......|.-....   ..|+......=.|+..
T Consensus        66 Gg~p--~~~~~-----------------~~~~~~~~~~~~l~~~~~~e~~~~~~~~~~~~~a~~~~D~~t~~~l~~il~e  126 (158)
T d2htna1          66 EGLP--NLQDL-----------------GKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRD  126 (158)
T ss_dssp             TCCC--CCSCC-----------------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CCCc--ccccc-----------------ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence             433  22211                 122345788899999999999999999666655   4588888888999999


Q ss_pred             hhhhHHHHHHHHhhh
Q 021580          194 ESGQDAVIRTLLYER  208 (310)
Q Consensus       194 EA~Haa~IRtlL~~~  208 (310)
                      |-.|..+++..|..-
T Consensus       127 ee~h~~~l~~~L~~~  141 (158)
T d2htna1         127 EEGHIDWLETELDLI  141 (158)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988854

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=94.89  E-value=0.3  Score=38.67  Aligned_cols=131  Identities=15%  Similarity=0.086  Sum_probs=96.1

Q ss_pred             hhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-C
Q 021580           40 DKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-G  118 (310)
Q Consensus        40 D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-a  118 (310)
                      =++.||-+|+.|+--...|..-+.-         +.+          .++ +.+...+.+.+.+|..|. .-|..-+. -
T Consensus         7 vi~~LN~~l~~E~~a~~~Y~~~a~~---------~~~----------~~~-~~l~~~f~~~a~eE~~Ha-~~l~eri~~l   65 (160)
T d1jgca_           7 VIEFLNAALRSELTAISQYWVHFRL---------QED----------WGL-AKMAKKSREESIEEMGHA-DKIIARILFL   65 (160)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH---------HHH----------TTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---------Hhc----------CCH-HHHHHHHHHHHHHHHHHH-HHHHHHHHhC
Confidence            3789999999999988888876521         110          112 457888999999999999 65555443 1


Q ss_pred             CCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhcccccc---cCChhHHHHHHHHHHHhh
Q 021580          119 FARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPN---LVNCTSRSLVAGLLGVES  195 (310)
Q Consensus       119 v~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~---l~~~~~l~aAA~Il~VEA  195 (310)
                      -..|.++..                 ++...+.|....|..+.-.|.-.+..|...+..   ..|+......=.|+.-|-
T Consensus        66 Gg~p~~~~~-----------------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~l~eee  128 (160)
T d1jgca_          66 EGHPNLQKL-----------------DPLRIGEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEE  128 (160)
T ss_dssp             TCCCCCSCC-----------------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred             CCCCccccc-----------------ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence            113333221                 123456899999999999999999999887776   457778888889999999


Q ss_pred             hhHHHHHHHHhhh
Q 021580          196 GQDAVIRTLLYER  208 (310)
Q Consensus       196 ~Haa~IRtlL~~~  208 (310)
                      .|..++.+.|...
T Consensus       129 ~h~~~l~~~l~~i  141 (160)
T d1jgca_         129 GHVDFLETQISLY  141 (160)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998877643

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=93.96  E-value=0.66  Score=35.82  Aligned_cols=133  Identities=12%  Similarity=-0.067  Sum_probs=96.3

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      .+-||-|+.-|+....-|+.-+.-          +         +.-++ +.+...+.+++.+|..|. .-|...|. .-
T Consensus         9 ~~~L~~a~~~E~~A~~~Y~~~A~~----------a---------~~~g~-~~ia~~f~~~A~eE~~HA-~~l~~~l~~lg   67 (146)
T d1lkoa1           9 EKNILTAFAGESQARNRYNYFGGQ----------A---------KKDGF-VQISDIFAETADQEREHA-KRLFKFLEGGD   67 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH----------H---------HHTTC-HHHHHHHHHHHHHHHHHH-HHHHHHCCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH----------H---------HHCCc-HHHHHHHHHHHHHHHHHH-HHHHHHHHccC
Confidence            578999999999998888775410          0         01112 578899999999999999 77777665 22


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccc---ccCChhHHHHHHHHHHHhhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIP---NLVNCTSRSLVAGLLGVESG  196 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap---~l~~~~~l~aAA~Il~VEA~  196 (310)
                      ..|....                  |+-....+..+.+..+..-|.-.+..|.-.+.   ...++.+...--.|+..|-.
T Consensus        68 ~~p~~~~------------------~~~~~~~~~~~l~~~~~~~e~e~~~~y~~~~~~a~~~~D~~~~~~f~~i~~~E~~  129 (146)
T d1lkoa1          68 LEIVAAF------------------PAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEF  129 (146)
T ss_dssp             CCCCCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCC------------------CccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence            3343211                  11222456777888888888778888876554   55778899999999999999


Q ss_pred             hHHHHHHHHhhhhhcc
Q 021580          197 QDAVIRTLLYERADQI  212 (310)
Q Consensus       197 Haa~IRtlL~~~~~~~  212 (310)
                      |..+++.+|..-.+.+
T Consensus       130 H~~~f~~~l~~l~~~~  145 (146)
T d1lkoa1         130 HEKRFLDFARNIKEGR  145 (146)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999998766544

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=93.88  E-value=0.082  Score=40.67  Aligned_cols=56  Identities=16%  Similarity=0.242  Sum_probs=47.5

Q ss_pred             CCChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           37 EANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        37 ~~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      ..++.++|+.|+-.|..-..||...+..                       --++.+++++..|+.+|..|+ +.|++-.
T Consensus        90 ~~~~~~~l~~ai~~E~~a~~~Y~~l~~~-----------------------~~d~~~r~~~~~i~~eE~~H~-~~l~~l~  145 (149)
T d1vjxa_          90 DLTLKEVLDIAISVEKDSIILYYELKDG-----------------------LVNSDAQKTVKKIIDQEKEHL-RKLLEMK  145 (149)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCSHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            3568899999999999999999987631                       137899999999999999999 9888643

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.93  E-value=0.2  Score=38.37  Aligned_cols=54  Identities=22%  Similarity=0.258  Sum_probs=46.5

Q ss_pred             ChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 021580           39 NDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTV  116 (310)
Q Consensus        39 ~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aL  116 (310)
                      +..++|..|+-.|..-..||...+..                       .-|+.+++++..|+.+|..|+ +.|++.+
T Consensus        96 ~~~~~l~~a~~~E~~a~~~Y~~la~~-----------------------~~d~~~~~l~~~i~~~E~~H~-~~l~~~~  149 (158)
T d2fzfa1          96 DIIDLIRWAMKAEEIAAEFYLKLEEM-----------------------VKEEEKKRLMRYLADMERGHY-YTLRAEY  149 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHT-----------------------SCSHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------cCcHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence            46789999999999999999988632                       136889999999999999999 9998765

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.39  E-value=1.2  Score=33.82  Aligned_cols=123  Identities=15%  Similarity=0.011  Sum_probs=82.8

Q ss_pred             CChhhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 021580           38 ANDKDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG  117 (310)
Q Consensus        38 ~~D~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg  117 (310)
                      .+=.+.||=|++.|+....-|+.-+.-          +         ++.++ +.+.+.+.+++..|..|. ..|-.-|.
T Consensus         5 ~~t~e~L~~a~~~E~~A~~~Yl~~A~~----------~---------~~~g~-~~ia~~f~~~A~eE~~HA-~~l~~~l~   63 (135)
T d1yuza1           5 GSTLENLKAAIAGETGAHAKYTAFAKA----------A---------REQGY-EQIARLFEATAAAELIHI-GLEYALVA   63 (135)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHH----------H---------HHTTC-HHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH----------H---------hHCCC-hHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            445889999999999999888765421          1         01112 578899999999999999 65555543


Q ss_pred             ---CCCCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhccchhHhhhccccccc---CChhHHHHHHHHH
Q 021580          118 ---GFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVGLVGYVGTIPNL---VNCTSRSLVAGLL  191 (310)
Q Consensus       118 ---av~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E~VGvtAY~Gaap~l---~~~~~l~aAA~Il  191 (310)
                         +.|  .+...                 ++.-...+..+.+....--|.-.+..|...+...   .++.....--.|+
T Consensus        64 ~lgg~p--~~~~~-----------------~~~~~~~~~~~L~~~~~~ee~e~~~~Y~~~~~~A~~~~d~~~~~~f~~i~  124 (135)
T d1yuza1          64 EMEPGY--EKPTV-----------------AAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAK  124 (135)
T ss_dssp             HHSTTC--CCCCC-------------------CCCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             hcCCCC--ccccc-----------------ccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence               322  21111                 0111234566666666665666777787766544   5888888889999


Q ss_pred             HHhhhhHHH
Q 021580          192 GVESGQDAV  200 (310)
Q Consensus       192 ~VEA~Haa~  200 (310)
                      ..|-.|+-+
T Consensus       125 ~~E~~H~e~  133 (135)
T d1yuza1         125 LAESVHAER  133 (135)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999864

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=87.76  E-value=2.9  Score=31.58  Aligned_cols=126  Identities=10%  Similarity=0.027  Sum_probs=79.4

Q ss_pred             hhHHhhHHHHHHHHHHHHHhhhhCCCCCccchhhhcCCCCCCCcccCCCCHHHHHHHHHHHHhHHHHHHHHHHHhhc-CC
Q 021580           41 KDLIQVALNLEFLETEFFLNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLSRAIVTTVG-GF  119 (310)
Q Consensus        41 ~diLNFALnLEyLEa~FY~~a~~G~gl~~~~~~l~~gGp~p~g~~~a~l~~~v~~~~~eia~~E~~HV~~~L~~aLg-av  119 (310)
                      .+-||=|++-|+-...-|+.-+.          .+         .+-++ +.+.+.+.+++.+|..|. ..+-+.|. --
T Consensus         8 ~~~L~~a~~~E~~A~~~Y~~~a~----------~a---------~~~g~-~~iA~~f~~~A~eE~~HA-~~~~~~i~~lg   66 (141)
T d1j30a_           8 AENLKQGFIGESMANRRYLYFAK----------RA---------DEEGY-PEIAGLLRSIAEGETAHA-FGHLDFIRQGG   66 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH----------HH---------HHHTC-HHHHHHHHHHHHHHHHHH-HHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH----------HH---------HHCCc-HHHHHHHHHHHHHHHHHH-HHHHHHHHhCC
Confidence            57899999999999888877541          00         01122 578899999999999999 65555543 11


Q ss_pred             CCCcccccchhhHHHHHhhhcCCCCCCCCCCCChHHHHHHHhhcc-chhHh---hhcccccccCChhHHHHHHHHHHHhh
Q 021580          120 ARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIP-YVGLV---GYVGTIPNLVNCTSRSLVAGLLGVES  195 (310)
Q Consensus       120 ~rP~iDls~~~F~~~~~~A~g~~l~p~FdPy~n~~~FL~~A~v~E-~VGvt---AY~Gaap~l~~~~~l~aAA~Il~VEA  195 (310)
                      ..|.+.                    +. |+.+...-|..+..-| .--..   .|...+-...++.+...--.|+..|-
T Consensus        67 ~~p~~~--------------------~~-~~~~~~~~l~~~~~~e~~e~~~~y~~~~~~A~~e~d~~~~~~~~~i~~~E~  125 (141)
T d1j30a_          67 LTDPAT--------------------DK-PIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEK  125 (141)
T ss_dssp             CBCTTT--------------------SC-BCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCC--------------------Cc-CcCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence            112110                    00 1122222222222212 22233   34455666788999999999999999


Q ss_pred             hhHHHHHHHHhhh
Q 021580          196 GQDAVIRTLLYER  208 (310)
Q Consensus       196 ~Haa~IRtlL~~~  208 (310)
                      .|..+.+.+|.+-
T Consensus       126 ~H~~~f~~~l~~l  138 (141)
T d1j30a_         126 SHAEKFQNVLKQL  138 (141)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998763