Citrus Sinensis ID: 021590

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM
ccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHccccccccccEEcccccccccEEcEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccEEEEEEccccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEcccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHcccc
ccccEEEHHHcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccEEEEccccHHcEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccEEEEEccccccccccHHcccccccccccEEEEEcccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHccccccHHccccccccccHHHHHHHHHHHccccccccHHHHccc
maipvidfskLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEkksgeklenldwedvfllsddnewpsktpgfKETMAEYRSELKKLAENVMEVMDenlglpkgyikkafnggegdnaffgtkvshyppcphpelvnglrphtdaggVILLFQdekvgglqilkdeewidvqplpnsivintgdqievlsngryKSIWHRvnatpdgnrrsiasfynpslkatiapapelseKANQEVEQaanypkfvfgdYMSVYAeqkflpkeprfqavnam
maipvidfsklYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKlereegfknsaavKKLNELVekksgeklenldwEDVFLlsddnewpsktpgfkETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHrvnatpdgnrrSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKflpkeprfQAVNAM
MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM
***PVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLER************************LENLDWEDVFLLSD************************LAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATP******IASFY*************************ANYPKFVFGDYMSVYAEQKFL************
MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGF**********ELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM
MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM
MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPR*QA*NA*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGIxxxxxxxxxxxxxxxxxxxxxEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETxxxxxxxxxxxxxxxxxxxxxNLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query310 2.2.26 [Sep-21-2011]
Q0WPW4307 1-aminocyclopropane-1-car yes no 0.974 0.983 0.730 1e-128
Q9FR99306 1-aminocyclopropane-1-car N/A no 0.987 1.0 0.709 1e-120
P31237319 1-aminocyclopropane-1-car N/A no 0.967 0.940 0.554 1e-91
Q00985314 1-aminocyclopropane-1-car N/A no 0.961 0.949 0.536 6e-91
O48882330 1-aminocyclopropane-1-car N/A no 0.961 0.903 0.549 1e-89
P54847320 1-aminocyclopropane-1-car N/A no 0.967 0.937 0.533 6e-88
P24157316 1-aminocyclopropane-1-car N/A no 0.951 0.933 0.527 1e-87
P05116315 1-aminocyclopropane-1-car N/A no 0.964 0.949 0.527 2e-87
Q08507320 1-aminocyclopropane-1-car N/A no 0.961 0.931 0.533 3e-87
Q08508319 1-aminocyclopropane-1-car N/A no 0.964 0.937 0.527 7e-87
>sp|Q0WPW4|ACCO5_ARATH 1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1 Back     alignment and function desciption
 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/315 (73%), Positives = 254/315 (80%), Gaps = 13/315 (4%)

Query: 1   MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLER 60
           MAIPVIDFSKL GEER KTL++IA ACE WGFFQLVNHGI  ELL +VKK++S+CYK ER
Sbjct: 1   MAIPVIDFSKLNGEEREKTLSEIARACEEWGFFQLVNHGIPLELLNKVKKLSSDCYKTER 60

Query: 61  EEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSD--DNEWPSKTPGFKETMAEYRS 118
           EE FK S  VK LNELV+K SGEKLEN+DWEDVF L D   NEWPS     KETM EYR 
Sbjct: 61  EEAFKTSNPVKLLNELVQKNSGEKLENVDWEDVFTLLDHNQNEWPS---NIKETMGEYRE 117

Query: 119 ELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGD---NAFFGTKVSHYPPCPHPELVNGL 175
           E++KLA  +MEVMDENLGLPKGYIKKAFN G  D    AFFGTKVSHYPPCPHPELVNGL
Sbjct: 118 EVRKLASKMMEVMDENLGLPKGYIKKAFNEGMEDGEETAFFGTKVSHYPPCPHPELVNGL 177

Query: 176 RPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWH 235
           R HTDAGGV+LLFQD++  GLQ+LKD EWIDVQPLPN+IVINTGDQIEVLSNGRYKS WH
Sbjct: 178 RAHTDAGGVVLLFQDDEYDGLQVLKDGEWIDVQPLPNAIVINTGDQIEVLSNGRYKSAWH 237

Query: 236 RVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQ 295
           RV A  +GNRRSIASFYNPS KA I PA    E+ +++      YPKFVFGDYM VYA Q
Sbjct: 238 RVLAREEGNRRSIASFYNPSYKAAIGPAAVAEEEGSEK-----KYPKFVFGDYMDVYANQ 292

Query: 296 KFLPKEPRFQAVNAM 310
           KF+PKEPRF AV ++
Sbjct: 293 KFMPKEPRFLAVKSL 307
Enzyme involved in the ethylene biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 7EC: .EC: 4
>sp|Q9FR99|ACCO_MUSAC 1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1 Back     alignment and function description
>sp|P31237|ACCO_ACTDE 1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1 Back     alignment and function description
>sp|Q00985|ACCO1_MALDO 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1 Back     alignment and function description
>sp|O48882|ACCO2_MALDO 1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1 Back     alignment and function description
>sp|P54847|ACCO3_CUCME 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|P24157|ACCO4_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1 Back     alignment and function description
>sp|P05116|ACCO1_SOLLC 1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2 Back     alignment and function description
>sp|Q08507|ACCO3_PETHY 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1 Back     alignment and function description
>sp|Q08508|ACCO4_PETHY 1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
225459657311 PREDICTED: 1-aminocyclopropane-1-carboxy 1.0 0.996 0.855 1e-152
449449769309 PREDICTED: 1-aminocyclopropane-1-carboxy 0.993 0.996 0.842 1e-151
356509373308 PREDICTED: 1-aminocyclopropane-1-carboxy 0.993 1.0 0.832 1e-149
255641825308 unknown [Glycine max] 0.993 1.0 0.829 1e-149
255558576309 1-aminocyclopropane-1-carboxylate oxidas 0.990 0.993 0.826 1e-148
358248478307 uncharacterized protein LOC100790622 [Gl 0.990 1.0 0.819 1e-147
28949891308 1-aminocyclopropane-1-carboxylic acid ox 0.993 1.0 0.812 1e-147
224084998310 1-aminocyclopropane-1-carboxylate [Popul 0.993 0.993 0.814 1e-147
317106684311 JMS09K11.4 [Jatropha curcas] 0.996 0.993 0.823 1e-147
388501362309 unknown [Lotus japonicus] 0.990 0.993 0.825 1e-146
>gi|225459657|ref|XP_002285881.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/311 (85%), Positives = 280/311 (90%), Gaps = 1/311 (0%)

Query: 1   MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLER 60
           MAIPVIDFSKL GEERAKT+A+IAN CE WGFFQLVNHGI EELLERVKKV SE YKLER
Sbjct: 1   MAIPVIDFSKLNGEERAKTMARIANGCEEWGFFQLVNHGIPEELLERVKKVCSEFYKLER 60

Query: 61  EEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSEL 120
           EEGFK+S  ++ LNELVEKKSGEKLEN+DWEDV  L DDNEWPSKTPGFKETMAEYR EL
Sbjct: 61  EEGFKDSRPIRLLNELVEKKSGEKLENVDWEDVITLVDDNEWPSKTPGFKETMAEYRKEL 120

Query: 121 KKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTD 180
           KKLAE VMEVMDENLGLPKGYIKKAFN GEGDNAFFGTKVSHYPPCPH EL+NGLR HTD
Sbjct: 121 KKLAEKVMEVMDENLGLPKGYIKKAFNDGEGDNAFFGTKVSHYPPCPHSELLNGLRAHTD 180

Query: 181 AGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNAT 240
           AGGVILLFQD+KV GLQILKD EWIDVQPLPNSIVINTGDQIEVLSNG+YKS+ HRV  +
Sbjct: 181 AGGVILLFQDDKVKGLQILKDGEWIDVQPLPNSIVINTGDQIEVLSNGKYKSVLHRVMTS 240

Query: 241 PDGNRRSIASFYNPSLKATIAPAPELSEKANQ-EVEQAANYPKFVFGDYMSVYAEQKFLP 299
           PDGNRRSIASFYNP LKATIAPAP+L EKANQ ++E    YPKFVFGDYMSVYAEQKFLP
Sbjct: 241 PDGNRRSIASFYNPPLKATIAPAPQLVEKANQDDLEIVQAYPKFVFGDYMSVYAEQKFLP 300

Query: 300 KEPRFQAVNAM 310
           KEPRF AV AM
Sbjct: 301 KEPRFHAVGAM 311

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449449769|ref|XP_004142637.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like [Cucumis sativus] gi|449500668|ref|XP_004161163.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356509373|ref|XP_003523424.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like [Glycine max] Back     alignment and taxonomy information
>gi|255641825|gb|ACU21181.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255558576|ref|XP_002520313.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223540532|gb|EEF42099.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358248478|ref|NP_001240144.1| uncharacterized protein LOC100790622 [Glycine max] gi|255648179|gb|ACU24543.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|28949891|emb|CAD70622.1| 1-aminocyclopropane-1-carboxylic acid oxidase [Cicer arietinum] Back     alignment and taxonomy information
>gi|224084998|ref|XP_002307461.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] gi|222856910|gb|EEE94457.1| 1-aminocyclopropane-1-carboxylate [Populus trichocarpa] Back     alignment and taxonomy information
>gi|317106684|dbj|BAJ53186.1| JMS09K11.4 [Jatropha curcas] Back     alignment and taxonomy information
>gi|388501362|gb|AFK38747.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query310
TAIR|locus:2031422307 AT1G77330 [Arabidopsis thalian 0.974 0.983 0.730 1.1e-119
TAIR|locus:2205568323 EFE "ethylene-forming enzyme" 0.970 0.931 0.514 2.9e-80
TAIR|locus:2027099320 ACO2 "ACC oxidase 2" [Arabidop 0.951 0.921 0.498 1.4e-78
TAIR|locus:2008905320 AT1G12010 [Arabidopsis thalian 0.941 0.912 0.496 5e-76
TAIR|locus:2050364310 ACO1 "ACC oxidase 1" [Arabidop 0.932 0.932 0.454 4.7e-64
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.887 0.741 0.397 3.1e-51
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.919 0.818 0.386 4.6e-50
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.893 0.763 0.384 1.2e-49
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.916 0.804 0.356 1.4e-48
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.887 0.806 0.380 4.7e-48
TAIR|locus:2031422 AT1G77330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1178 (419.7 bits), Expect = 1.1e-119, P = 1.1e-119
 Identities = 230/315 (73%), Positives = 256/315 (81%)

Query:     1 MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLER 60
             MAIPVIDFSKL GEER KTL++IA ACE WGFFQLVNHGI  ELL +VKK++S+CYK ER
Sbjct:     1 MAIPVIDFSKLNGEEREKTLSEIARACEEWGFFQLVNHGIPLELLNKVKKLSSDCYKTER 60

Query:    61 EEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSD--DNEWPSKTPGFKETMAEYRS 118
             EE FK S  VK LNELV+K SGEKLEN+DWEDVF L D   NEWPS     KETM EYR 
Sbjct:    61 EEAFKTSNPVKLLNELVQKNSGEKLENVDWEDVFTLLDHNQNEWPSN---IKETMGEYRE 117

Query:   119 ELKKLAENVMEVMDENLGLPKGYIKKAFNGG--EGDN-AFFGTKVSHYPPCPHPELVNGL 175
             E++KLA  +MEVMDENLGLPKGYIKKAFN G  +G+  AFFGTKVSHYPPCPHPELVNGL
Sbjct:   118 EVRKLASKMMEVMDENLGLPKGYIKKAFNEGMEDGEETAFFGTKVSHYPPCPHPELVNGL 177

Query:   176 RPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWH 235
             R HTDAGGV+LLFQD++  GLQ+LKD EWIDVQPLPN+IVINTGDQIEVLSNGRYKS WH
Sbjct:   178 RAHTDAGGVVLLFQDDEYDGLQVLKDGEWIDVQPLPNAIVINTGDQIEVLSNGRYKSAWH 237

Query:   236 RVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQ 295
             RV A  +GNRRSIASFYNPS KA I PA    E+ +++      YPKFVFGDYM VYA Q
Sbjct:   238 RVLAREEGNRRSIASFYNPSYKAAIGPAAVAEEEGSEK-----KYPKFVFGDYMDVYANQ 292

Query:   296 KFLPKEPRFQAVNAM 310
             KF+PKEPRF AV ++
Sbjct:   293 KFMPKEPRFLAVKSL 307
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009693 "ethylene biosynthetic process" evidence=TAS
GO:0009815 "1-aminocyclopropane-1-carboxylate oxidase activity" evidence=ISS
GO:0006826 "iron ion transport" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
TAIR|locus:2205568 EFE "ethylene-forming enzyme" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027099 ACO2 "ACC oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008905 AT1G12010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050364 ACO1 "ACC oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07920ACCO2_SOLLC1, ., 1, 4, ., 1, 7, ., 40.50780.95480.9367N/Ano
P31237ACCO_ACTDE1, ., 1, 4, ., 1, 7, ., 40.55410.96770.9404N/Ano
P31239ACCO_PEA1, ., 1, 4, ., 1, 7, ., 40.52420.94510.9242N/Ano
P31238ACCO1_DORSP1, ., 1, 4, ., 1, 7, ., 40.52210.98060.9296N/Ano
Q9ZQZ1ACCO_DENCR1, ., 1, 4, ., 1, 7, ., 40.52730.94190.9182N/Ano
P31528ACCO_DIACA1, ., 1, 4, ., 1, 7, ., 40.50630.96120.9283N/Ano
Q00985ACCO1_MALDO1, ., 1, 4, ., 1, 7, ., 40.53670.96120.9490N/Ano
P19464ACCO_PERAE1, ., 1, 4, ., 1, 7, ., 40.51760.96120.9312N/Ano
Q0WPW4ACCO5_ARATH1, ., 1, 4, ., 1, 7, ., 40.73010.97410.9837yesno
Q9MB94ACCO_PRUMU1, ., 1, 4, ., 1, 7, ., 40.51750.96450.9373N/Ano
P05116ACCO1_SOLLC1, ., 1, 4, ., 1, 7, ., 40.52710.96450.9492N/Ano
A2Z1W9ACCO1_ORYSI1, ., 1, 4, ., 1, 7, ., 40.51590.97090.9347N/Ano
Q08506ACCO1_PETHY1, ., 1, 4, ., 1, 7, ., 40.51920.96120.9341N/Ano
Q8S932ACCO_DIOKA1, ., 1, 4, ., 1, 7, ., 40.51270.96450.9402N/Ano
Q43792ACCO_TOBAC1, ., 1, 4, ., 1, 7, ., 40.52420.95160.9247N/Ano
Q9FR99ACCO_MUSAC1, ., 1, 4, ., 1, 7, ., 40.70960.98701.0N/Ano
Q39705ACCO2_DORSP1, ., 1, 4, ., 1, 7, ., 40.51590.98060.9353N/Ano
O48882ACCO2_MALDO1, ., 1, 4, ., 1, 7, ., 40.54950.96120.9030N/Ano
P24157ACCO4_SOLLC1, ., 1, 4, ., 1, 7, ., 40.52710.95160.9335N/Ano
Q08507ACCO3_PETHY1, ., 1, 4, ., 1, 7, ., 40.53350.96120.9312N/Ano
Q08508ACCO4_PETHY1, ., 1, 4, ., 1, 7, ., 40.52710.96450.9373N/Ano
P54847ACCO3_CUCME1, ., 1, 4, ., 1, 7, ., 40.53330.96770.9375N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.4LOW CONFIDENCE prediction!
4th Layer1.14.17.40.979
3rd Layer1.14.170.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015445001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (311 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00026899001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (474 aa)
     •  0.899
GSVIVG00016601001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (445 aa)
     •  0.899
ACS1
SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_1179, whole ge [...] (469 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-134
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-110
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-84
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 9e-75
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-67
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-65
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-62
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-61
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-52
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-52
PLN02704335 PLN02704, PLN02704, flavonol synthase 7e-52
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 4e-50
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-50
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-49
PLN02904357 PLN02904, PLN02904, oxidoreductase 5e-47
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-47
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-45
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-44
PLN02997325 PLN02997, PLN02997, flavonol synthase 5e-41
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-39
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-35
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-35
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-33
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 8e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-27
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 9e-26
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-14
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 8e-08
pfam1364093 pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase su 0.002
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information 
 Score =  384 bits (988), Expect = e-134
 Identities = 174/315 (55%), Positives = 221/315 (70%), Gaps = 15/315 (4%)

Query: 1   MAIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLER 60
            + PVID  KL GEERA T+  I +ACE WGFF+LVNHGIS EL++ V+K+  E YK   
Sbjct: 5   ESFPVIDMEKLNGEERAATMELIKDACENWGFFELVNHGISHELMDEVEKMTKEHYKKCM 64

Query: 61  EEGFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLL-----SDDNEWPSKTPGFKETMAE 115
           E+ FK   A  K  E V+ +    +E+LDWE  F L     S+  + P     +++ M +
Sbjct: 65  EQRFKEMVA-SKGLEGVQTE----VEDLDWESTFFLRHLPESNLADIPDLDDEYRKVMKD 119

Query: 116 YRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGL 175
           +  EL+KLAE +++++ ENLGL KGY+KKAF+G +G    FGTKVS+YPPCP P+LV GL
Sbjct: 120 FALELEKLAEELLDLLCENLGLEKGYLKKAFHGSKGPT--FGTKVSNYPPCPKPDLVKGL 177

Query: 176 RPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWH 235
           R HTDAGG+ILLFQD+KV GLQ+LKD EW+DV P+ +SIV+N GDQ+EV++NG+YKS+ H
Sbjct: 178 RAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGKYKSVMH 237

Query: 236 RVNATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQ 295
           RV A  DGNR SIASFYNP   A I PAP L EK   E E+   YPKFVF DYM +YA  
Sbjct: 238 RVVAQTDGNRMSIASFYNPGSDAVIYPAPALVEK---EAEEEQVYPKFVFEDYMKLYAGL 294

Query: 296 KFLPKEPRFQAVNAM 310
           KF  KEPRF+A+ AM
Sbjct: 295 KFQAKEPRFEAMKAM 309

Length = 321
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|222280 pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 310
PLN02216357 protein SRG1 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02947374 oxidoreductase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02704335 flavonol synthase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.77
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.16
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.94
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.85
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.24
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 85.2
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=1.5e-79  Score=569.32  Aligned_cols=296  Identities=33%  Similarity=0.600  Sum_probs=258.5

Q ss_pred             CCceeeCCCCCc-hhHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHhhhhccccccCcccccccc
Q 021590            2 AIPVIDFSKLYG-EERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKK   80 (310)
Q Consensus         2 ~iPvIDls~l~~-~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~~~~~   80 (310)
                      +||+|||+.+.+ +.+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.....++.||+...
T Consensus        52 ~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~  131 (357)
T PLN02216         52 EIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAF  131 (357)
T ss_pred             CCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccc
Confidence            699999998843 3345789999999999999999999999999999999999999999999988644333444554322


Q ss_pred             ccccccCCCccccccCC-------CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCC
Q 021590           81 SGEKLENLDWEDVFLLS-------DDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDN  153 (310)
Q Consensus        81 ~~~~~~~~d~~e~~~~~-------~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~  153 (310)
                      .....+..||+|.|.+.       .+|.||+.++.||+++++|+.+|.+|+.+||++||++|||++++|.+.+...    
T Consensus       132 ~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~----  207 (357)
T PLN02216        132 VVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDD----  207 (357)
T ss_pred             cccccccCCceeeeeeeccCcccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccC----
Confidence            22233557999998764       3678999889999999999999999999999999999999999999988632    


Q ss_pred             cceeeeeeccCCCCCCCccCCccCcCCCCceEEEeecCCcCceeEeeCCceEEcccCCCeEEEEcchhHHHHhCCccccc
Q 021590          154 AFFGTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSI  233 (310)
Q Consensus       154 ~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqv~~~g~W~~v~p~~~~~vVniGd~l~~~TnG~~~s~  233 (310)
                      ..+.+|++|||||+.++...|+++|||+|+||||+|++.++||||+++|+|++|+|.||++||||||+||+||||+|||+
T Consensus       208 ~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~  287 (357)
T PLN02216        208 LGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSI  287 (357)
T ss_pred             chheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeecc
Confidence            23679999999999988899999999999999999965699999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCeeEEEEeeCCCCCcEEecCCCC-CccccccccccCCCCCccHHHHHHHHHHhccCCCccchhhhc
Q 021590          234 WHRVNATPDGNRRSIASFYNPSLKATIAPAPEL-SEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVN  308 (310)
Q Consensus       234 ~HRV~~~~~~~R~Si~~F~~p~~d~~i~p~~~~-~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~  308 (310)
                      +|||++++.++|||++||++|+.|++|.|+|+| ++++      |++|++++|+||++.++.+.+.++.. ++.++
T Consensus       288 ~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~------p~~Y~~~t~~ey~~~~~~~~~~~~~~-~~~~~  356 (357)
T PLN02216        288 EHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQK------AALFKSLTTKEYFDGLFSRELDGKAY-LDAMR  356 (357)
T ss_pred             CceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCC------CCCCCCcCHHHHHHHHHhcccCCcch-hhhhc
Confidence            999998888899999999999999999999999 6666      99999999999999998777766644 66543

>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
1w9y_A319 The Structure Of Acc Oxidase Length = 319 4e-82
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-37
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-37
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-36
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 8e-15
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 8e-09
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 8e-09
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 5e-05
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  301 bits (770), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 159/312 (50%), Positives = 204/312 (65%), Gaps = 14/312 (4%)
Query: 3   IPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREE 62
            P+I   K+ G ERA T   I +ACE WGFF+LVNHGI  E+ + V+K     YK   E+
Sbjct: 4   FPIISLDKVNGVERAATXEXIKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCXEQ 63
Query: 63  GFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLL-----SDDNEWPSKTPGFKETMAEYR 117
            FK   A K L  +       ++ + DWE  F L     S+ +E P     ++E   ++ 
Sbjct: 64  RFKELVASKALEGV-----QAEVTDXDWESTFFLKHLPISNISEVPDLDEEYREVXRDFA 118
Query: 118 SELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRP 177
             L+KLAE +++++ ENLGL KGY+K AF G +G N  FGTKVS+YPPCP P+L+ GLR 
Sbjct: 119 KRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN--FGTKVSNYPPCPKPDLIKGLRA 176
Query: 178 HTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRV 237
           HTDAGG+ILLFQD+KV GLQ+LKD +WIDV P  +SIV+N GDQ+EV++NG+YKS+ HRV
Sbjct: 177 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRV 236
Query: 238 NATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKF 297
            A  DG R S+ASFYNP   A I PAP L EK  +E +Q   YPKFVF DY  +YA  KF
Sbjct: 237 IAQKDGARXSLASFYNPGSDAVIYPAPALVEKEAEENKQV--YPKFVFDDYXKLYAGLKF 294
Query: 298 LPKEPRFQAVNA 309
             KEPRF+A  A
Sbjct: 295 QAKEPRFEAXKA 306
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query310
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-147
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-128
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-84
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-80
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-78
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-74
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  416 bits (1071), Expect = e-147
 Identities = 161/313 (51%), Positives = 211/313 (67%), Gaps = 14/313 (4%)

Query: 3   IPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREE 62
            P+I   K+ G ERA T+  I +ACE WGFF+LVNHGI  E+++ V+K+    YK   E+
Sbjct: 4   FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 63

Query: 63  GFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLL-----SDDNEWPSKTPGFKETMAEYR 117
            FK   A K L     +    ++ ++DWE  F L     S+ +E P     ++E M ++ 
Sbjct: 64  RFKELVASKAL-----EGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFA 118

Query: 118 SELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRP 177
             L+KLAE +++++ ENLGL KGY+K AF G +G N  FGTKVS+YPPCP P+L+ GLR 
Sbjct: 119 KRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN--FGTKVSNYPPCPKPDLIKGLRA 176

Query: 178 HTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRV 237
           HTDAGG+ILLFQD+KV GLQ+LKD +WIDV P+ +SIV+N GDQ+EV++NG+YKS+ HRV
Sbjct: 177 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRV 236

Query: 238 NATPDGNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKF 297
            A  DG R S+ASFYNP   A I PAP L EK  +  E    YPKFVF DYM +YA  KF
Sbjct: 237 IAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAE--ENKQVYPKFVFDDYMKLYAGLKF 294

Query: 298 LPKEPRFQAVNAM 310
             KEPRF+A+ AM
Sbjct: 295 QAKEPRFEAMKAM 307
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.36
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 90.82
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 90.54
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 88.6
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 88.2
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 80.32
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
Probab=100.00  E-value=1.2e-81  Score=575.63  Aligned_cols=295  Identities=52%  Similarity=0.941  Sum_probs=262.7

Q ss_pred             CCceeeCCCCCchhHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHhhhhccccccCccccccccc
Q 021590            2 AIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKS   81 (310)
Q Consensus         2 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~~~~~~   81 (310)
                      +||||||+.+.++++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++....+||.++.    
T Consensus         3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~----   78 (319)
T 1w9y_A            3 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQ----   78 (319)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred             CCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccc----
Confidence            5999999988655688999999999999999999999999999999999999999999999988654456776653    


Q ss_pred             cccccCCCccccccCC-----CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCCcce
Q 021590           82 GEKLENLDWEDVFLLS-----DDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFF  156 (310)
Q Consensus        82 ~~~~~~~d~~e~~~~~-----~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~  156 (310)
                       .+.+..||+|.|++.     ..|.||+.+++||+.+++|+++|.+|+.+||++|+++||+++++|.+.+....  ++.+
T Consensus        79 -~e~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~--~~~~  155 (319)
T 1w9y_A           79 -AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSK--GPNF  155 (319)
T ss_dssp             -CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTT--CCEE
T ss_pred             -ccCCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcC--Cccc
Confidence             234567999999876     35789999999999999999999999999999999999999999999886432  3457


Q ss_pred             eeeeeccCCCCCCCccCCccCcCCCCceEEEeecCCcCceeEeeCCceEEcccCCCeEEEEcchhHHHHhCCcccccccc
Q 021590          157 GTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHR  236 (310)
Q Consensus       157 ~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqv~~~g~W~~v~p~~~~~vVniGd~l~~~TnG~~~s~~HR  236 (310)
                      .+|++|||||++++...|+++|||+|+||||+||+.++||||+++|+|++|+|.||++||||||+||+||||+|||++||
T Consensus       156 ~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HR  235 (319)
T 1w9y_A          156 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR  235 (319)
T ss_dssp             EEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEE
T ss_pred             eeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccce
Confidence            89999999999988889999999999999999964699999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCeeEEEEeeCCCCCcEEecCCCC-Ccc---ccccccccCCCCCccHHHHHHHHHHhccCCCccchhhhcc
Q 021590          237 VNATPDGNRRSIASFYNPSLKATIAPAPEL-SEK---ANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNA  309 (310)
Q Consensus       237 V~~~~~~~R~Si~~F~~p~~d~~i~p~~~~-~~~---~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~  309 (310)
                      |+++++++|||++||++|+.|++|.|+|+| +++   +      |++|+++||+||++.++++++.++..+|+.++.
T Consensus       236 Vv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~------p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~  306 (319)
T 1w9y_A          236 VIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEEN------KQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA  306 (319)
T ss_dssp             ECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred             ecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccC------ccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence            999888899999999999999999999999 655   5      899999999999999998888888766666653
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 310
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-85
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-63
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 7e-57
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-49
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  256 bits (655), Expect = 3e-85
 Identities = 157/308 (50%), Positives = 208/308 (67%), Gaps = 4/308 (1%)

Query: 3   IPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREE 62
            P+I   K+ G ERA T+  I +ACE WGFF+LVNHGI  E+++ V+K+    YK   E+
Sbjct: 3   FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 62

Query: 63  GFKNSAAVKKLNELVEKKSGEKLENLDWEDVFLLSDDNEWPSKTPGFKETMAEYRSELKK 122
            FK   A K L  +  + +    E+  +     +S+ +E P     ++E M ++   L+K
Sbjct: 63  RFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEK 122

Query: 123 LAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFFGTKVSHYPPCPHPELVNGLRPHTDAG 182
           LAE +++++ ENLGL KGY+K AF G +G N  FGTKVS+YPPCP P+L+ GLR HTDAG
Sbjct: 123 LAEELLDLLCENLGLEKGYLKNAFYGSKGPN--FGTKVSNYPPCPKPDLIKGLRAHTDAG 180

Query: 183 GVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHRVNATPD 242
           G+ILLFQD+KV GLQ+LKD +WIDV P+ +SIV+N GDQ+EV++NG+YKS+ HRV A  D
Sbjct: 181 GIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD 240

Query: 243 GNRRSIASFYNPSLKATIAPAPELSEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEP 302
           G R S+ASFYNP   A I PAP L EK  +  E    YPKFVF DYM +YA  KF  KEP
Sbjct: 241 GARMSLASFYNPGSDAVIYPAPALVEKEAE--ENKQVYPKFVFDDYMKLYAGLKFQAKEP 298

Query: 303 RFQAVNAM 310
           RF+A+ AM
Sbjct: 299 RFEAMKAM 306
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query310
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.26
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 84.3
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=5.2e-80  Score=561.73  Aligned_cols=299  Identities=53%  Similarity=0.942  Sum_probs=267.1

Q ss_pred             CCceeeCCCCCchhHHHHHHHHHHHHHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHhhhhccccccCccccccccc
Q 021590            2 AIPVIDFSKLYGEERAKTLAQIANACEVWGFFQLVNHGISEELLERVKKVASECYKLEREEGFKNSAAVKKLNELVEKKS   81 (310)
Q Consensus         2 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~g~~~~~~~~~   81 (310)
                      +||||||+.+++.+|++++++|.+||+++|||||+||||+.++++++++.++.||++|.|+|+++.....++.++.    
T Consensus         2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~----   77 (307)
T d1w9ya1           2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQ----   77 (307)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----
T ss_pred             CCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCcc----
Confidence            5999999999877899999999999999999999999999999999999999999999999988655555666654    


Q ss_pred             cccccCCCccccccCC-----CCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhcCCCCCCcce
Q 021590           82 GEKLENLDWEDVFLLS-----DDNEWPSKTPGFKETMAEYRSELKKLAENVMEVMDENLGLPKGYIKKAFNGGEGDNAFF  156 (310)
Q Consensus        82 ~~~~~~~d~~e~~~~~-----~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~  156 (310)
                       ......||+|.|.+.     +.+.||+.+++|++.+++|++.|.+|+.+|+++|+++||+++++|.+.+....  .+.+
T Consensus        78 -~~~~~~d~~e~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~--~~~~  154 (307)
T d1w9ya1          78 -AEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSK--GPNF  154 (307)
T ss_dssp             -CCGGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTT--CCEE
T ss_pred             -ccccccChhhhcccccccccCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccc--cccc
Confidence             233457899988765     45678999999999999999999999999999999999999999999885443  4567


Q ss_pred             eeeeeccCCCCCCCccCCccCcCCCCceEEEeecCCcCceeEeeCCceEEcccCCCeEEEEcchhHHHHhCCcccccccc
Q 021590          157 GTKVSHYPPCPHPELVNGLRPHTDAGGVILLFQDEKVGGLQILKDEEWIDVQPLPNSIVINTGDQIEVLSNGRYKSIWHR  236 (310)
Q Consensus       157 ~lr~~~Yp~~~~~~~~~g~~~HtD~~~lTlL~qd~~~~GLqv~~~g~W~~v~p~~~~~vVniGd~l~~~TnG~~~s~~HR  236 (310)
                      .+|++||||++.++...|+++|||+|+||||+|++.++||||.++|+|++|+|.+|++|||+||+||+||||+||||.||
T Consensus       155 ~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HR  234 (307)
T d1w9ya1         155 GTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR  234 (307)
T ss_dssp             EEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEE
T ss_pred             cceecCCCCCcccccccccccccccceeEEeeccCCCCeEEEecCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCce
Confidence            89999999999988889999999999999999986789999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCeeEEEEeeCCCCCcEEecCCCC-CccccccccccCCCCCccHHHHHHHHHHhccCCCccchhhhccC
Q 021590          237 VNATPDGNRRSIASFYNPSLKATIAPAPEL-SEKANQEVEQAANYPKFVFGDYMSVYAEQKFLPKEPRFQAVNAM  310 (310)
Q Consensus       237 V~~~~~~~R~Si~~F~~p~~d~~i~p~~~~-~~~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~  310 (310)
                      |+.+++.+||||+||++|+.|++|.|+|+| +...+   +.|++|+|||++||++.+++.+|+.|+++|+.+++|
T Consensus       235 Vv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~---~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~  306 (307)
T d1w9ya1         235 VIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAE---ENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM  306 (307)
T ss_dssp             ECCCSSSCCEEEEEEEECCTTCEECCCGGGC-----------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred             eecCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCc---cCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhcc
Confidence            999888899999999999999999999999 43210   138999999999999999999999999999998876
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure