Citrus Sinensis ID: 021644
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 309 | ||||||
| 255544852 | 381 | lysophosphatidic acid acyltransferase, p | 0.967 | 0.784 | 0.732 | 1e-126 | |
| 449442533 | 380 | PREDICTED: 1-acyl-sn-glycerol-3-phosphat | 0.964 | 0.784 | 0.688 | 1e-123 | |
| 356504817 | 297 | PREDICTED: 1-acyl-sn-glycerol-3-phosphat | 0.935 | 0.973 | 0.712 | 1e-122 | |
| 356504815 | 377 | PREDICTED: 1-acyl-sn-glycerol-3-phosphat | 0.944 | 0.774 | 0.705 | 1e-122 | |
| 224055038 | 366 | predicted protein [Populus trichocarpa] | 0.919 | 0.775 | 0.733 | 1e-122 | |
| 356534633 | 383 | PREDICTED: 1-acyl-sn-glycerol-3-phosphat | 0.964 | 0.778 | 0.677 | 1e-121 | |
| 255636898 | 297 | unknown [Glycine max] | 0.935 | 0.973 | 0.705 | 1e-120 | |
| 255571568 | 395 | lysophosphatidic acid acyltransferase, p | 0.935 | 0.731 | 0.698 | 1e-120 | |
| 289472609 | 390 | lysophosphatidic acid acyltransferase [B | 0.935 | 0.741 | 0.698 | 1e-120 | |
| 356498539 | 384 | PREDICTED: 1-acyl-sn-glycerol-3-phosphat | 0.935 | 0.752 | 0.692 | 1e-119 |
| >gi|255544852|ref|XP_002513487.1| lysophosphatidic acid acyltransferase, putative [Ricinus communis] gi|223547395|gb|EEF48890.1| lysophosphatidic acid acyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 252/299 (84%)
Query: 1 MGKEHALVICNHRSDIDWLVGWVVAQRKGCLGSTLAIIKKEAKHLPFIGWSMWFSEYVFL 60
MGKEHAL+ICNHRSDIDWLVGW++AQR GCLGS LA++KK+AK LP IGWSMWFS+Y+FL
Sbjct: 81 MGKEHALLICNHRSDIDWLVGWILAQRSGCLGSALAVMKKQAKVLPIIGWSMWFSDYLFL 140
Query: 61 ERRWNKDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVL 120
ER W KDE TLKSGFKRL DFPMPFWLAL+VEGTRFTEAKL AAQEYA++RGLPIPRNVL
Sbjct: 141 ERSWAKDETTLKSGFKRLEDFPMPFWLALFVEGTRFTEAKLQAAQEYAVTRGLPIPRNVL 200
Query: 121 IPRTKGFVSAVNNMRSFVPAIYDCTVAVPKSQPPPTMVRMFRGQPSVVNVEIRRHSMEEL 180
+PRTKGFVSAV +MRSFVPAIYDCTV V KSQP PTM+R+FR Q SV+N++I+RHSM+E+
Sbjct: 201 LPRTKGFVSAVVHMRSFVPAIYDCTVDVDKSQPAPTMLRIFRRQSSVINLQIKRHSMQEV 260
Query: 181 PKTADGIAQWCKDVFVTKDALLEKYLSRDTFGLQERQDIGRPKKSLFVVVSWSCLLIFIL 240
P+TADGI+QWCKDVFVTKDA+LEKY ++ TF Q+ Q IGRPKKSLFVV+ WS LLIF +
Sbjct: 261 PETADGISQWCKDVFVTKDAMLEKYHTKGTFSDQKHQHIGRPKKSLFVVIFWSNLLIFGI 320
Query: 241 VKLFQWTSILASWAAIAFSAFFLLLVVGVMQILIQSSESEHSTPLKITPHQDPTTERLL 299
V FQ+ S L SW ++FS L+LV VMQILI SSESEHSTP D ERLL
Sbjct: 321 VMSFQFLSFLNSWQVLSFSVTLLVLVTIVMQILIHSSESEHSTPPPKLTFSDQAKERLL 379
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442533|ref|XP_004139036.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Cucumis sativus] gi|449476069|ref|XP_004154631.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356504817|ref|XP_003521191.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356504815|ref|XP_003521190.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224055038|ref|XP_002298406.1| predicted protein [Populus trichocarpa] gi|222845664|gb|EEE83211.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356534633|ref|XP_003535857.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255636898|gb|ACU18782.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255571568|ref|XP_002526730.1| lysophosphatidic acid acyltransferase, putative [Ricinus communis] gi|183211896|gb|ACC59198.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Ricinus communis] gi|223533919|gb|EEF35644.1| lysophosphatidic acid acyltransferase, putative [Ricinus communis] gi|403330328|gb|AFR42413.1| A-class lysophosphatidate acyltransferase-2 [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|289472609|gb|ADC97478.1| lysophosphatidic acid acyltransferase [Brassica napus] gi|289472613|gb|ADC97480.1| lysophosphatidic acid acyltransferase [Brassica napus] | Back alignment and taxonomy information |
|---|
| >gi|356498539|ref|XP_003518108.1| PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 309 | ||||||
| TAIR|locus:2076676 | 389 | LPAT2 "AT3G57650" [Arabidopsis | 0.935 | 0.742 | 0.660 | 1.2e-104 | |
| TAIR|locus:2008226 | 376 | LPAT3 "AT1G51260" [Arabidopsis | 0.941 | 0.773 | 0.636 | 9.4e-98 | |
| UNIPROTKB|E2R575 | 375 | AGPAT3 "Uncharacterized protei | 0.757 | 0.624 | 0.389 | 3.1e-44 | |
| FB|FBgn0036622 | 380 | CG4753 [Drosophila melanogaste | 0.783 | 0.636 | 0.366 | 6.4e-44 | |
| UNIPROTKB|Q9NRZ7 | 376 | AGPAT3 "1-acyl-sn-glycerol-3-p | 0.757 | 0.622 | 0.385 | 6.4e-44 | |
| RGD|1305787 | 376 | Agpat3 "1-acylglycerol-3-phosp | 0.776 | 0.638 | 0.379 | 1e-43 | |
| UNIPROTKB|G5E5P6 | 376 | AGPAT3 "Uncharacterized protei | 0.757 | 0.622 | 0.389 | 2.2e-43 | |
| UNIPROTKB|E1BYF3 | 376 | AGPAT3 "Uncharacterized protei | 0.757 | 0.622 | 0.389 | 4.5e-43 | |
| MGI|MGI:1336186 | 376 | Agpat3 "1-acylglycerol-3-phosp | 0.757 | 0.622 | 0.385 | 9.3e-43 | |
| FB|FBgn0036623 | 386 | CG4729 [Drosophila melanogaste | 0.789 | 0.632 | 0.356 | 1.5e-42 |
| TAIR|locus:2076676 LPAT2 "AT3G57650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 191/289 (66%), Positives = 227/289 (78%)
Query: 1 MGKEHALVICNHRSDIDWLVGWVVAQRKGCLGSTLAIIKKEAKHLPFIGWSMWFSEYVFL 60
MGKEHALV+CNHRSDIDWLVGW++AQR GCLGS LA++KK +K LP IGWSMWFSEY+FL
Sbjct: 80 MGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFL 139
Query: 61 ERRWNKDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVL 120
ER W KDE TLKSG +RL DFP PFWLAL+VEGTRFTEAKL AAQEYA S LPIPRNVL
Sbjct: 140 ERNWAKDESTLKSGLQRLSDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPIPRNVL 199
Query: 121 IPRTKGFVSAVNNMRSFVPAIYDCTVAVPKSQPPPTMVRMFRGQPSVVNVEIRRHSMEEL 180
IPRTKGFVSAV+NMRSFVPAIYD TV +PK+ PPPTM+R+F+GQPSVV+V I+ HSM++L
Sbjct: 200 IPRTKGFVSAVSNMRSFVPAIYDMTVTIPKTSPPPTMLRLFKGQPSVVHVHIKCHSMKDL 259
Query: 181 PKTADGIAQWCKDVFVTKDALLEKYLSRDTFGLQERQDIGRPKKSLFVVVSWSCLLIFIL 240
P++ D IAQWC+D FV KDALL+K+++ DTF Q+ Q+IGRP KSL VV+SW+C+L
Sbjct: 260 PESDDAIAQWCRDQFVAKDALLDKHIAADTFPGQQEQNIGRPIKSLAVVLSWACVLTLGA 319
Query: 241 VKLFQWTXXXXXXXXXXXXXXXXXXVVGVMQILIQSSESEHSTPLKITP 289
+K W + MQILI+SS+SE STP K+ P
Sbjct: 320 IKFLHWAQLFSSWKGITISALGLGIITLCMQILIRSSQSERSTPAKVVP 368
|
|
| TAIR|locus:2008226 LPAT3 "AT1G51260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R575 AGPAT3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0036622 CG4753 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9NRZ7 AGPAT3 "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| RGD|1305787 Agpat3 "1-acylglycerol-3-phosphate O-acyltransferase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G5E5P6 AGPAT3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BYF3 AGPAT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1336186 Agpat3 "1-acylglycerol-3-phosphate O-acyltransferase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0036623 CG4729 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_Genewise1_v1.C_LG_I1554 | 1-acylglycerol-3-phosphate O-acyltransferase (EC-2.3.1.51) (366 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| estExt_fgenesh4_pm.C_1660030 | • | 0.915 | |||||||||
| estExt_fgenesh4_pg.C_LG_IX0244 | • | • | 0.910 | ||||||||
| estExt_fgenesh4_pm.C_LG_IV0573 | • | • | 0.910 | ||||||||
| gw1.I.9205.1 | • | 0.899 | |||||||||
| fgenesh4_pm.C_scaffold_44000016 | • | 0.899 | |||||||||
| fgenesh4_pm.C_LG_X000808 | • | 0.899 | |||||||||
| fgenesh4_pm.C_LG_VIII000213 | • | 0.899 | |||||||||
| fgenesh4_pg.C_scaffold_44000079 | • | 0.899 | |||||||||
| fgenesh4_pg.C_LG_VI001806 | • | 0.899 | |||||||||
| fgenesh4_pg.C_LG_II001856 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 309 | |||
| PLN02380 | 376 | PLN02380, PLN02380, 1-acyl-sn-glycerol-3-phosphate | 0.0 | |
| cd07990 | 193 | cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acylt | 1e-74 | |
| PLN02510 | 374 | PLN02510, PLN02510, probable 1-acyl-sn-glycerol-3- | 6e-55 | |
| smart00563 | 118 | smart00563, PlsC, Phosphate acyltransferases | 7e-20 | |
| COG0204 | 255 | COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl | 3e-12 | |
| PRK14014 | 301 | PRK14014, PRK14014, putative acyltransferase; Prov | 1e-11 | |
| pfam01553 | 131 | pfam01553, Acyltransferase, Acyltransferase | 2e-11 | |
| cd07989 | 184 | cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr | 1e-07 | |
| TIGR00530 | 130 | TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosp | 3e-05 |
| >gnl|CDD|178006 PLN02380, PLN02380, 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Score = 529 bits (1365), Expect = 0.0
Identities = 217/289 (75%), Positives = 246/289 (85%)
Query: 1 MGKEHALVICNHRSDIDWLVGWVVAQRKGCLGSTLAIIKKEAKHLPFIGWSMWFSEYVFL 60
MGKEHALVI NHRSDIDWLVGW++AQR GCLGS LA++KK +K LP IGWSMWFSEYVFL
Sbjct: 81 MGKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVFL 140
Query: 61 ERRWNKDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVL 120
ER W KDE TLKSGF+RL DFP PFWLAL+VEGTRFT+AKLLAAQEYA SRGLP+PRNVL
Sbjct: 141 ERSWAKDENTLKSGFQRLKDFPRPFWLALFVEGTRFTQAKLLAAQEYAASRGLPVPRNVL 200
Query: 121 IPRTKGFVSAVNNMRSFVPAIYDCTVAVPKSQPPPTMVRMFRGQPSVVNVEIRRHSMEEL 180
IPRTKGFVSAV+NMRSFVPAIYD TVAVPK QP PTM+R+FRGQ SVV+V I+RHSM+EL
Sbjct: 201 IPRTKGFVSAVSNMRSFVPAIYDVTVAVPKGQPAPTMLRIFRGQSSVVHVHIKRHSMKEL 260
Query: 181 PKTADGIAQWCKDVFVTKDALLEKYLSRDTFGLQERQDIGRPKKSLFVVVSWSCLLIFIL 240
P+T DGIAQWCKDVFV KDALL+K+ + DTFG QE QDIGRPKKSL VV+SW+CLLI
Sbjct: 261 PETDDGIAQWCKDVFVAKDALLDKHFAEDTFGDQEYQDIGRPKKSLIVVISWACLLILGA 320
Query: 241 VKLFQWTSILASWAAIAFSAFFLLLVVGVMQILIQSSESEHSTPLKITP 289
+K QW S+L+SW IA A L++V +MQILI+SS+SE STP K
Sbjct: 321 IKFLQWLSLLSSWKGIASLAAGLVIVTILMQILIESSQSERSTPAKAAN 369
|
Length = 376 |
| >gnl|CDD|153252 cd07990, LPLAT_LCLAT1-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
| >gnl|CDD|178126 PLN02510, PLN02510, probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases | Back alignment and domain information |
|---|
| >gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237584 PRK14014, PRK14014, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
| >gnl|CDD|129621 TIGR00530, AGP_acyltrn, 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 309 | |||
| PLN02380 | 376 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 100.0 | |
| KOG1505 | 346 | consensus Lysophosphatidic acid acyltransferase LP | 100.0 | |
| PLN02510 | 374 | probable 1-acyl-sn-glycerol-3-phosphate acyltransf | 100.0 | |
| PRK14014 | 301 | putative acyltransferase; Provisional | 100.0 | |
| cd07990 | 193 | LPLAT_LCLAT1-like Lysophospholipid Acyltransferase | 100.0 | |
| KOG2848 | 276 | consensus 1-acyl-sn-glycerol-3-phosphate acyltrans | 99.87 | |
| PRK15018 | 245 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr | 99.84 | |
| PTZ00261 | 355 | acyltransferase; Provisional | 99.8 | |
| cd07988 | 163 | LPLAT_ABO13168-like Lysophospholipid Acyltransfera | 99.79 | |
| COG0204 | 255 | PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas | 99.76 | |
| cd07991 | 211 | LPLAT_LPCAT1-like Lysophospholipid Acyltransferase | 99.76 | |
| PLN02901 | 214 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 99.74 | |
| cd07993 | 205 | LPLAT_DHAPAT-like Lysophospholipid Acyltransferase | 99.74 | |
| PF01553 | 132 | Acyltransferase: Acyltransferase; InterPro: IPR002 | 99.67 | |
| TIGR00530 | 130 | AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra | 99.65 | |
| cd07986 | 210 | LPLAT_ACT14924-like Lysophospholipid Acyltransfera | 99.64 | |
| PLN02833 | 376 | glycerol acyltransferase family protein | 99.62 | |
| smart00563 | 118 | PlsC Phosphate acyltransferases. Function in phosp | 99.61 | |
| PRK08043 | 718 | bifunctional acyl-[acyl carrier protein] synthetas | 99.55 | |
| cd07992 | 203 | LPLAT_AAK14816-like Lysophospholipid Acyltransfera | 99.54 | |
| PRK08633 | 1146 | 2-acyl-glycerophospho-ethanolamine acyltransferase | 99.52 | |
| PRK03355 | 783 | glycerol-3-phosphate acyltransferase; Validated | 99.52 | |
| PLN02783 | 315 | diacylglycerol O-acyltransferase | 99.51 | |
| PRK06814 | 1140 | acylglycerophosphoethanolamine acyltransferase; Pr | 99.5 | |
| cd07987 | 212 | LPLAT_MGAT-like Lysophospholipid Acyltransferases | 99.48 | |
| cd07985 | 235 | LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA | 99.46 | |
| PRK04974 | 818 | glycerol-3-phosphate acyltransferase; Validated | 99.45 | |
| TIGR03703 | 799 | plsB glycerol-3-phosphate O-acyltransferase. Membe | 99.43 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 99.43 | |
| cd06551 | 187 | LPLAT Lysophospholipid acyltransferases (LPLATs) o | 99.29 | |
| cd07983 | 189 | LPLAT_DUF374-like Lysophospholipid Acyltransferase | 99.26 | |
| PLN02588 | 525 | glycerol-3-phosphate acyltransferase | 99.21 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 99.18 | |
| PRK11915 | 621 | glycerol-3-phosphate acyltransferase; Reviewed | 99.17 | |
| cd07989 | 184 | LPLAT_AGPAT-like Lysophospholipid Acyltransferases | 99.12 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 99.04 | |
| cd07984 | 192 | LPLAT_LABLAT-like Lysophospholipid Acyltransferase | 98.59 | |
| KOG3729 | 715 | consensus Mitochondrial glycerol-3-phosphate acylt | 98.39 | |
| COG2937 | 810 | PlsB Glycerol-3-phosphate O-acyltransferase [Lipid | 98.28 | |
| KOG3730 | 685 | consensus Acyl-CoA:dihydroxyactetone-phosphate acy | 98.02 | |
| PLN02349 | 426 | glycerol-3-phosphate acyltransferase | 97.83 | |
| KOG2847 | 286 | consensus Phosphate acyltransferase [Lipid transpo | 97.5 | |
| PRK08419 | 298 | lipid A biosynthesis lauroyl acyltransferase; Revi | 86.19 | |
| KOG2898 | 354 | consensus Predicted phosphate acyltransferase, con | 80.83 | |
| KOG4666 | 412 | consensus Predicted phosphate acyltransferase, con | 80.59 | |
| PRK07920 | 298 | lipid A biosynthesis lauroyl acyltransferase; Prov | 80.52 |
| >PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-83 Score=614.19 Aligned_cols=294 Identities=73% Similarity=1.199 Sum_probs=285.1
Q ss_pred CCceEEEEeCCCCcchHHHHHHHHhhcCCCCceEEEEchhhcccchHHHHHHhcCcEEEecCCccCHHHHHHHHHHhhcC
Q 021644 2 GKEHALVICNHRSDIDWLVGWVVAQRKGCLGSTLAIIKKEAKHLPFIGWSMWFSEYVFLERRWNKDEQTLKSGFKRLVDF 81 (309)
Q Consensus 2 gke~~lii~NH~S~~D~lvl~~l~~r~g~lg~~kfv~K~el~~~PviGw~~~~~~~ifv~R~~~~D~~~l~~~l~~l~~~ 81 (309)
|+|++|++|||+|++||+++|.++.+.|++|+.++++|+|++++|++||+|+..++||++|+|++|++.+++.++++++.
T Consensus 82 g~e~~lIisNHqS~~D~l~l~~l~~r~~~l~~~~~vlKkeL~~iPv~Gw~~~~~~~IfIdR~~~~d~~~l~~~~~~l~~~ 161 (376)
T PLN02380 82 GKEHALVISNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYVFLERSWAKDENTLKSGFQRLKDF 161 (376)
T ss_pred CCCcEEEEECCChhHHHHHHHHHhhhcccccceeEeeHHHhhhccHHHHHHHHcCCEEecCCchhHHHHHHHHHHHHhhC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEeecccccchhhHHHHHHHHHhcCCCCCceeccCCCcchhhhHhhccCCCcceeeeeeecCCCCCCcchhhhc
Q 021644 82 PMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVLIPRTKGFVSAVNNMRSFVPAIYDCTVAVPKSQPPPTMVRMF 161 (309)
Q Consensus 82 ~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l~~vL~PRtkGf~~~l~~lr~~~~aVyDvTi~y~~~~~~ptl~~~l 161 (309)
+.++|++|||||||++++++++|++||+++|+|+++|||+|||+||..++++|++.+++|||+|++|+++.+.|++++++
T Consensus 162 ~~~~wllIFPEGTR~~~~k~~~s~~fA~~~glP~l~hvL~PRt~Gf~~~l~~L~~~~~aiyDvTi~y~~~~~~psl~~il 241 (376)
T PLN02380 162 PRPFWLALFVEGTRFTQAKLLAAQEYAASRGLPVPRNVLIPRTKGFVSAVSNMRSFVPAIYDVTVAVPKGQPAPTMLRIF 241 (376)
T ss_pred CCccEEEEecCcCCCCchhhHHHHHHHHHcCCCCcccccCcccccHHHHHHHhhhcccEEEEEEEEecCCCCCccHHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999887779999999
Q ss_pred ccCceEEEEEEEeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCchhHHHHHHHHHHHHHHHH
Q 021644 162 RGQPSVVNVEIRRHSMEELPKTADGIAQWCKDVFVTKDALLEKYLSRDTFGLQERQDIGRPKKSLFVVVSWSCLLIFILV 241 (309)
Q Consensus 162 ~g~p~~v~v~vrripi~~iP~~~~~~~~WL~~~~~eKD~ll~~~~~~g~Fp~~~~~~~~~~~~~l~~~~~W~~~~~~~~~ 241 (309)
+|+|.+||+|+||+|++++|++++++++||+|+|+|||++||+|+++|+||+++..+.+||.++|+|+++|+|++++|++
T Consensus 242 ~g~p~~v~v~vrr~pi~~iP~~~~~~~~WL~~~w~eKD~lle~~~~~g~F~~~~~~~~~~~~~~l~~~~~w~~~~~~~~~ 321 (376)
T PLN02380 242 RGQSSVVHVHIKRHSMKELPETDDGIAQWCKDVFVAKDALLDKHFAEDTFGDQEYQDIGRPKKSLIVVISWACLLILGAI 321 (376)
T ss_pred CCCCeEEEEEEEEEECCcCcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccCCCCCCc
Q 021644 242 KLFQWTSILASWAAIAFSAFFLLLVVGVMQILIQSSESEHSTPLKITPHQDPTT 295 (309)
Q Consensus 242 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~ 295 (309)
||+++++++|||.+|+++++++++++++|++||++|||||||+|+.+.++.+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~ 375 (376)
T PLN02380 322 KFLQWLSLLSSWKGIASLAAGLVIVTILMQILIESSQSERSTPAKAANAKVKKE 375 (376)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCcccccccccccc
Confidence 999999999999999999999999999999999999999999999887776654
|
|
| >KOG1505 consensus Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >PRK14014 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like | Back alignment and domain information |
|---|
| >KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00261 acyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 | Back alignment and domain information |
|---|
| >COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
| >cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like | Back alignment and domain information |
|---|
| >PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like | Back alignment and domain information |
|---|
| >PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] | Back alignment and domain information |
|---|
| >TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases | Back alignment and domain information |
|---|
| >cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 | Back alignment and domain information |
|---|
| >PLN02833 glycerol acyltransferase family protein | Back alignment and domain information |
|---|
| >smart00563 PlsC Phosphate acyltransferases | Back alignment and domain information |
|---|
| >PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
| >cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like | Back alignment and domain information |
|---|
| >PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated | Back alignment and domain information |
|---|
| >PRK03355 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
| >PLN02783 diacylglycerol O-acyltransferase | Back alignment and domain information |
|---|
| >PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like | Back alignment and domain information |
|---|
| >cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT | Back alignment and domain information |
|---|
| >PRK04974 glycerol-3-phosphate acyltransferase; Validated | Back alignment and domain information |
|---|
| >TIGR03703 plsB glycerol-3-phosphate O-acyltransferase | Back alignment and domain information |
|---|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis | Back alignment and domain information |
|---|
| >cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 | Back alignment and domain information |
|---|
| >PLN02588 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >PRK11915 glycerol-3-phosphate acyltransferase; Reviewed | Back alignment and domain information |
|---|
| >cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like | Back alignment and domain information |
|---|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like | Back alignment and domain information |
|---|
| >KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
| >KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02349 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
| >KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed | Back alignment and domain information |
|---|
| >KOG2898 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 309 | |||
| 1iuq_A | 367 | Glycerol-3-phosphate acyltransferase; open twisted | 99.38 |
| >1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.1e-13 Score=129.63 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=82.7
Q ss_pred CceEEEEeCCCCcchHHHHHHHHhhcC--CCCceEEEEchhhcccchH---HHHHHhcCcEEEecCCc-----------c
Q 021644 3 KEHALVICNHRSDIDWLVGWVVAQRKG--CLGSTLAIIKKEAKHLPFI---GWSMWFSEYVFLERRWN-----------K 66 (309)
Q Consensus 3 ke~~lii~NH~S~~D~lvl~~l~~r~g--~lg~~kfv~K~el~~~Pvi---Gw~~~~~~~ifv~R~~~-----------~ 66 (309)
++++|+++||||+.|.+++..++.+.+ .-.++.||+|+++...|+. +++ +.+++|+..|.-. .
T Consensus 129 ~~~vIfisNHQS~~D~~vi~~~l~~~~~~l~~~~~fVAk~eL~~~Pl~~Pfs~g-~~l~cI~~kk~id~~p~l~r~~~r~ 207 (367)
T 1iuq_A 129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIG-RNLICVYSKKHMFDIPELTETKRKA 207 (367)
T ss_dssp TCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHT-SEEEECCCGGGTTSSGGGHHHHHHH
T ss_pred CCcEEEEECCccchhHHHHHHHHhhcccccccceEEEeehhhhcCccccchhhh-hheeeEEecccCCCcchhhhhhhHH
Confidence 579999999999999999998875411 0116899999999977766 544 3355677633322 3
Q ss_pred CHHHHHHHHHHhhcCCCCeEEEEeecccccchhh----------HHHHH----HHHHhcCCC--CCceec
Q 021644 67 DEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAK----------LLAAQ----EYALSRGLP--IPRNVL 120 (309)
Q Consensus 67 D~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k----------~~~s~----~~A~~~glp--~l~~vL 120 (309)
+.++|++..+.|++.+.. ++|||||||..++. ..+|. .+|.+.|.| +++-++
T Consensus 208 n~ksl~~~~~~Lk~GG~s--I~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg~P~hIvPvaI 275 (367)
T 1iuq_A 208 NTRSLKEMALLLRGGSQL--IWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLAL 275 (367)
T ss_dssp HHHHHHHHHHHHHHCCCE--EEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeE--EEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcCCCceEEEEEE
Confidence 457788888888875645 88999999998622 23566 888888888 665543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 309 | ||||
| d1iuqa_ | 367 | c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf | 9e-06 |
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Score = 44.2 bits (104), Expect = 9e-06
Identities = 21/235 (8%), Positives = 64/235 (27%), Gaps = 40/235 (17%)
Query: 3 KEHALVICNHRSDIDWLVGWVVAQRKGC--LGSTLAIIKKEAKHLPFIGWSMWFSEYVFL 60
+ ++I NH+++ D + ++ ++ +T+ + P + +
Sbjct: 129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICV 188
Query: 61 ERRWN-------------KDEQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEY 107
+ + + ++LK L W + G R
Sbjct: 189 YSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIW--IAPSGGRDRPDP------- 239
Query: 108 ALSRGLPIPRNVLIPRTKGFVSAVNNMRSFVPAIYDCTVAVPKSQPPPTMVRMFRGQPSV 167
+ + + ++ + PPP+ V + G+ V
Sbjct: 240 ---STGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRV 296
Query: 168 VN---VEIR----------RHSMEELPKTADGIAQWCKDVFVTKDALLEKYLSRD 209
+ + + + + + ++ D + +L+ +S
Sbjct: 297 IAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGK 351
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 309 | |||
| d1iuqa_ | 367 | Glycerol-3-phosphate (1)-acyltransferase {Cushaw s | 99.75 |
| >d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Glycerol-3-phosphate (1)-acyltransferase superfamily: Glycerol-3-phosphate (1)-acyltransferase family: Glycerol-3-phosphate (1)-acyltransferase domain: Glycerol-3-phosphate (1)-acyltransferase species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.75 E-value=1.3e-18 Score=164.25 Aligned_cols=199 Identities=10% Similarity=0.016 Sum_probs=120.1
Q ss_pred CceEEEEeCCCCcchHHHHHHHHhhcC--CCCceEEEEchhhcccchHHHHHHhcCcEEEecCCc-------------cC
Q 021644 3 KEHALVICNHRSDIDWLVGWVVAQRKG--CLGSTLAIIKKEAKHLPFIGWSMWFSEYVFLERRWN-------------KD 67 (309)
Q Consensus 3 ke~~lii~NH~S~~D~lvl~~l~~r~g--~lg~~kfv~K~el~~~PviGw~~~~~~~ifv~R~~~-------------~D 67 (309)
.+++|++|||+|++|+.+++.++.+.+ ...++.|++|+++...|++||.+...+.++|.|+.. .+
T Consensus 129 g~nVIlvSNHqS~~D~~il~~ll~~~~~~l~r~i~f~Ak~~l~~~Pl~~~f~~~~g~I~V~rk~~i~~~p~l~~~~~~~~ 208 (367)
T d1iuqa_ 129 GHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKAN 208 (367)
T ss_dssp TCEEEEEECCCCTTHHHHHHHHHTTTCHHHHHHCEEEECTHHHHCTTTHHHHHTSEEEECCCGGGTTSSGGGHHHHHHHH
T ss_pred CCCEEEEECCcccccHHHHHHHHhccccccccceEEEeehhhhccHHHHHHHHhCCEEEEeccccccccccccchhhhhh
Confidence 468999999999999999998887654 124689999999999999999999999999988642 13
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEeecccccchhhHHHHHHHHHhcCCCCCceeccCCCcchhhhHhhccCCCcceeeeeee
Q 021644 68 EQTLKSGFKRLVDFPMPFWLALYVEGTRFTEAKLLAAQEYALSRGLPIPRNVLIPRTKGFVSAVNNMRSFVPAIYDCTVA 147 (309)
Q Consensus 68 ~~~l~~~l~~l~~~~~~~~llIFPEGTR~t~~k~~~s~~~A~~~glp~l~~vL~PRtkGf~~~l~~lr~~~~aVyDvTi~ 147 (309)
...++...+.|++.+ .++.|||||||..++... -..++.-..|+..|....+....+....||++++.
T Consensus 209 ~~al~~~~~lL~~Gg--~~v~IfPEGTRsr~~~~d----------g~l~p~~F~~~~~~~~~~LA~~sgvP~hV~Pvai~ 276 (367)
T d1iuqa_ 209 TRSLKEMALLLRGGS--QLIWIAPSGGRDRPDPST----------GEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALL 276 (367)
T ss_dssp HHHHHHHHHHHHHCC--CEEEECTTCSCCCBCTTT----------CCBCCCCCCHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred hHHHHHHHHHhhcCC--eEEEEeccCcccCccccc----------ccccccccCccchHHHHHHHhcCCCCceEechhhh
Confidence 456777788887754 347799999998543100 00111111112212111121111211247888887
Q ss_pred cCCCCCCcc-hhhhccc----CceEEEEEEE-eeeCCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 021644 148 VPKSQPPPT-MVRMFRG----QPSVVNVEIR-RHSMEE-------LPKTADGIAQWCKDVFVTKDALLEKYLSRDTFGL 213 (309)
Q Consensus 148 y~~~~~~pt-l~~~l~g----~p~~v~v~vr-ripi~~-------iP~~~~~~~~WL~~~~~eKD~ll~~~~~~g~Fp~ 213 (309)
+.+..+.|. ...-+.. ....|.|.+- .+++++ .++.++...+|+++.++++...|++....+.=++
T Consensus 277 ~~d~~pP~~~v~~~ige~R~~~~~~V~i~~G~pId~~~~~~~~~~~~e~~ea~~k~l~d~v~eq~~~Lk~ai~gk~~~~ 355 (367)
T d1iuqa_ 277 CHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG 355 (367)
T ss_dssp CGGGSCCC----------CCCCCBCCEEEECCCCCHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred cccccCCCcccccchhhccccCCCceeEEeCCCcchhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 544322121 1111111 1122333331 122221 1233456789999999999999999887655433
|